TCONS_00067883-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067883-protein
Unique NameTCONS_00067883-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length248

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067883-protein ID=TCONS_00067883-protein|Name=TCONS_00067883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=248bp
TMSIFVHFQISPNYMFISQAVYKRFIRGSTIMKVLATATVLLVVFVLHSQ
MNNAEAETLGKSSGGGSKKKGPKVTHIVFFDMKIGNKEIGRIRIGLFGKT
VPKTVDNFAQLATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGTGGRSI
YGDKFPDENFKLKHYGPGYVSMANAGKDTNGSQFFITTVKTGWLDGKHVV
FGKILGGMDVVRIIENTPVDGSTPKEEVIVHDSGLETLDKPFNVEKEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042397XLOC_042397Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067883TCONS_00067883Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom
IPR020892Cyclophilin-type_PPIase_CS
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 96..111
score: 54.02
coord: 183..195
score: 71.56
coord: 196..211
score: 64.0
coord: 168..183
score: 72.87
coord: 125..137
score: 79.73
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 80..231
e-value: 9.2E-46
score: 155.9
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 79..235
score: 44.5
IPR029000Cyclophilin-like domainGENE3D2.40.100.10coord: 63..241
e-value: 6.1E-70
score: 234.1
IPR029000Cyclophilin-like domainSUPERFAMILY50891Cyclophilin-likecoord: 73..235
IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved sitePROSITEPS00170CSA_PPIASE_1coord: 120..137

Blast
[Close]
BLAST of TCONS_00067883-protein vs. Swiss-Prot (Human)
Match: PPIB (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 2.306e-96
Identity = 144/219 (65.75%), Postives = 170/219 (77.63%), Query Frame = 0 
Query:   32 MKVLATATVLL--VVFVLHSQMNNAEAETLGKSSGGGSKKKGPKVTHIVFFDMKIGNKEIGRIRIGLFGKTVPKTVDNFAQLATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGTGGRSIYGDKFPDENFKLKHYGPGYVSMANAGKDTNGSQFFITTVKTGWLDGKHVVFGKILGGMDVVRIIENTPVDG-STPKEEVIVHDSGLETLDKPFNVEKE 247
            MKVL  A ++   V F+L           L   S    KKKGPKVT  V+FD++IG++++GR+  GLFGKTVPKTVDNF  LATGEKGFG+K SKFHRVIKDFMIQGGDFTRGDGTGG+SIYG++FPDENFKLKHYGPG+VSMANAGKDTNGSQFFITTVKT WLDGKHVVFGK+L GM+VVR +E+T  D    P ++VI+ D G   ++KPF + KE
Sbjct:    9 MKVLLAAALIAGSVFFLL-----------LPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE 216
The following BLAST results are available for this feature:
BLAST of TCONS_00067883-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIB2.306e-9665.75Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
back to top