TCONS_00068123-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068123-protein
Unique NameTCONS_00068123-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068123-protein ID=TCONS_00068123-protein|Name=TCONS_00068123-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
IFIKKFIILLYCFSGNKKMLLVSCCVLLVSVVYGRQIEDLQNLLNAGNVG
LDDNHMARDSGNELAGMIGKPSQDVSEAEFNKDVSSLAQAGIGKNFEAKD
DYDSSIKELLNSFQADDKNGNVFHHGEEDSSFSAFGKNRNGLGALGSLEE
ELFLKQEEKARSRDGGIGGMGPSMYPCNDYEVTKEVTMGISIGGRKEGDL
LIGLFGCAVPKTVANFVALANHEYGFGFRGSKFHRDIKDFMVQGGDITNG
DGTGGKSIYGDHFADENFKITPNGPGWLCMANAGKDTNDSQFFITTADTP
WLVGKHVCFGKLLDGWCTVDKVQNLRVDPSNNKPYEDVVITDSRSLDTKQ
FPVSQQPINPSTRNCNSYY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042525XLOC_042525Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068123TCONS_00068123Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 233..245
score: 71.91
coord: 204..219
score: 55.96
coord: 304..319
score: 49.52
coord: 291..303
score: 61.9
coord: 276..291
score: 66.81
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 194..342
e-value: 6.2E-36
score: 123.9
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 187..345
score: 36.645
IPR029000Cyclophilin-like domainGENE3D2.40.100.10coord: 171..353
e-value: 1.5E-61
score: 206.7
IPR029000Cyclophilin-like domainSUPERFAMILY50891Cyclophilin-likecoord: 176..346

Blast
[Close]
BLAST of TCONS_00068123-protein vs. Swiss-Prot (Human)
Match: PPIB (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 3.423e-64
Identity = 102/177 (57.63%), Postives = 127/177 (71.75%), Query Frame = 0 
Query:  181 EVTKEVTMGISIGGRKEGDLLIGLFGCAVPKTVANFVALANHEYGFGFRGSKFHRDIKDFMVQGGDITNGDGTGGKSIYGDHFADENFKITPNGPGWLCMANAGKDTNDSQFFITTADTPWLVGKHVCFGKLLDGWCTVDKVQNLRVDPSNNKPYEDVVITDSRSLDT-KQFPVSQQ 356
            +VT +V   + IG    G ++ GLFG  VPKTV NFVALA  E GFG++ SKFHR IKDFM+QGGD T GDGTGGKSIYG+ F DENFK+   GPGW+ MANAGKDTN SQFFITT  T WL GKHV FGK+L+G   V KV++ + D S +KP +DV+I D   ++  K F ++++
Sbjct:   41 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTD-SRDKPLKDVIIADCGKIEVEKPFAIAKE 216
The following BLAST results are available for this feature:
BLAST of TCONS_00068123-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIB3.423e-6457.63Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
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