TCONS_00068395-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068395-protein
Unique NameTCONS_00068395-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length409

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068395-protein ID=TCONS_00068395-protein|Name=TCONS_00068395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=409bp
MSISLAFINGNSVPEKRSGHVAVFHNGLLIVFGGYGDNRDDASDEFLYFK
SIWCYSVEASQWTRHNSKGTLPEKNTGACAAVIGKELFLFGGYLQSRGHS
NQLSSLDLTTFTWKDLNDRTTGVTPSSRDKFGCWIDGQNIIYFGGFGHPP
ENWSKVKGDFCFEEFPLAWSHGTGWNNHLHILDTSVLKWSQPKGSGSVPS
PRAAFSTSQIGRKCFLFGGRFKEHRRNDLYVLDSKSFHWTQLEPIGDSPS
GRSWHVMENVSNNHLFIYGGFDNEGNALKDTWIYNISQNTWSELKTASKN
LDIFAPRMWHTACKTDSPGEVLIFGGCINSIVDVVDRAKHTNTVSVFRFS
PLSLRRQCLDFIMSNIVKYSGNVMELPQSLRRDIRHRSLALGLRSPNGHG
KLISNCQMM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042677XLOC_042677Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068395TCONS_00068395Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR006652Kelch_1
IPR011043Gal_Oxase/kelch_b-propeller
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 4..181
e-value: 2.0E-29
score: 102.1
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 182..357
e-value: 9.3E-35
score: 119.5
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 17..64
e-value: 7.4E-5
score: 22.2
NoneNo IPR availablePFAMPF13418Kelch_4coord: 201..250
e-value: 5.0E-6
score: 26.3
coord: 255..296
e-value: 2.5E-9
score: 36.9
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 11..151
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 174..330

Blast
[Close]
BLAST of TCONS_00068395-protein vs. Swiss-Prot (Human)
Match: KLDC2 (Kelch domain-containing protein 2 OS=Homo sapiens GN=KLHDC2 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 7.764e-91
Identity = 149/383 (38.90%), Postives = 227/383 (59.27%), Query Frame = 0 
Query:   12 SVPEKRSGHVAVFHNGLLIVFGGYGDNR-DDASDEFLYFKSIWCYSVEASQWTRHNSKGTLPEKNTGACAAVIGKELFLFGGYLQSRGHSNQLSSLDLTT----FTWKDLNDRTTGVTPSSRDKFGCWIDGQNIIYFGGFGHPPENWSKVKGDFCFEEFPLAW--SHGTGWNNHLHILDTSVLKWSQPKGSGSVPSPRAAFSTSQIGRKCFLFGGRFKEHRRNDLYVLDSKSFHWTQLEPIGDSPSGRSWHVMENVSNNHLFIYGGFDNEGNALKDTWIYNISQNTWSELKTASKNLDIFAPRMWHTACKTDSPGEVLIFGGCINSIVDVVDRAKHTNTVSVFRFSPLSLRRQCLDFIMSNIVKYSGNVMELPQSLRRDIRHR 387
            + P +RSGHVAV     + V+GGY  N+     D +L  + +W Y++E  +W + N++G +P   +G+CA  + + L+LFGG+  SRG++N+   LD  +      W+ ++    G+ PSS+DK G W+    +I+FGG+G+ PE+  KV G F F+E    W  SH  GWN+H+HILDT    WSQP  +G  PSPRAA + + +G + F+FGGR+++ R NDL+ L+  ++ W +L P G  P GRSWH +  VS++HLF++GGF  +   L D W Y IS+N W +            PR+WHTAC +D  GEV++FGGC N+++ V  RA H+N + +F   P SL R  L+ ++      + +   LP+ L   +  R
Sbjct:   27 ACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGH-HSRGNTNKFYMLDSRSTDRVLQWERID--CQGIPPSSKDKLGVWVYKNKLIFFGGYGYLPED--KVLGTFEFDETSF-WNSSHPRGWNDHVHILDTETFTWSQPITTGKAPSPRAAHACATVGNRGFVFGGRYRDARMNDLHYLNLDTWEWNELIPQGICPVGRSWHSLTPVSSDHLFLFGGFTTDKQPLSDAWTYCISKNEWIQFNHPYTE----KPRLWHTACASDE-GEVIVFGGCANNLL-VHHRAAHSNEILIFSVQPKSLVRLSLEAVICFKEMLANSWNCLPKHLLHSVNQR 397
The following BLAST results are available for this feature:
BLAST of TCONS_00068395-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLDC27.764e-9138.90Kelch domain-containing protein 2 OS=Homo sapiens ... [more]
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