TCONS_00068911-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068911-protein
Unique NameTCONS_00068911-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length710

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068911-protein ID=TCONS_00068911-protein|Name=TCONS_00068911-protein|organism=Clytia hemisphaerica|type=polypeptide|length=710bp
MGVALSRRNVDFELICKTGDVKGAGTDSNVYTVIVDEDEDKSRNVLLDCN
WRNDFEQGNIDTFKIRNVPNLGRVKSILLWRDSSGVNDDWFVEYIKVRQY
TVGKSDNSTDQNGNVSVNSTEQFKDIDGNHMKETNQSTGSLRQKVEYEYP
FPINRWIEPNRTYTFTIYDSLLPQDDKNPDQRFKELEEKRERYGLKGDCG
EAPKQIDVLPREESFSNDYKWDIVGKKMRLLAQKKFLKLRTSSKWENLDA
LVDVYKGSFGIPYGYYNWKSDEKFGQQRMRGCNATMLELCTEIPKNFPVT
GEMADPLLEETSLEEALKDRRIYIINLDVLNDIICKDCRTICPAMALFYD
KPDGTLLPIAIQLFQEPAENNPIFLPSDPEYTWMLAKMFFNNAECCLHQT
CTHLGFTHLVCESICISIHRSLSPSHPVFRLLGPHFLYLIAINSLAVQKL
LSPEGWIDITMTMGVSGLFQILKKKWKDWRLDTDGWLPSELKKRQVDDDE
RLTGYMYRKDASTLHQAIWDYVSEVLTNIYGESTEKLTDDFEIQQWGACL
TNCDTGVGIKGVFGDGKFEQLDDLIKTVTSVIYLSSVAHAAANFCQYDEY
AFPPNYPAILNGKAPSSKAEITESDVLSYLPNKDTTLSIMVVTKILSDRG
TNGLGDFEIQYQYEPKAVEAVEKFRARLAEISKEIKERNANMKDPYPYLD
PEEVPNAISI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042932XLOC_042932Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068911TCONS_00068911Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
IPR001024PLAT/LH2_dom
IPR020834LipOase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 671..691
NoneNo IPR availableGENE3D1.20.245.10coord: 395..710
e-value: 2.4E-88
score: 296.0
NoneNo IPR availableGENE3D1.20.245.10coord: 221..299
e-value: 6.3E-11
score: 41.1
NoneNo IPR availableGENE3D3.10.450.60coord: 300..394
e-value: 1.8E-28
score: 98.5
IPR013819Lipoxygenase, C-terminalPRINTSPR00087LIPOXYGENASEcoord: 418..438
score: 46.87
coord: 398..415
score: 39.13
coord: 380..397
score: 25.87
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 267..693
e-value: 9.5E-57
score: 192.8
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 165..710
score: 101.148
IPR013819Lipoxygenase, C-terminalSUPERFAMILY48484Lipoxigenasecoord: 172..710
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 5..166
e-value: 2.8E-24
score: 84.9
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 17..98
e-value: 5.8E-15
score: 55.8
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 10..129
score: 19.541
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 10..105
coord: 149..164
IPR020834Lipoxygenase, conserved sitePROSITEPS00081LIPOXYGENASE_2coord: 425..435

Blast
[Close]
BLAST of TCONS_00068911-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 2.368e-84
Identity = 211/723 (29.18%), Postives = 343/723 (47.44%), Query Frame = 0 
Query:   12 FELICKTGDVKGAGTDSNVYTVIVDEDEDKSRNVLLDCNWRNDFEQGNIDTFKIRNVPNLGRVKSILLWRDSSGVNDDWFVEYIKVRQYTVGKSDNSTDQNGNVSVNSTEQFKDIDGNHMKETNQSTGSLRQKVEYEYPFPINRWIEPNRTYTFTIYDSLLPQDDKN---PDQRFKELEEKRERYGLKGDCGEAPKQIDV-----LPREESFSNDYKWDIV---GKKMRLLAQKKFLKLRTSSKWENLDALVDVY-KGSFGIPYGYYN-WKSDEKFGQQRMRGCNATMLELCTEIPKNFPVTGEMADPLLE-ETSLEEALKDRRIYIINLDVLNDIICKDC-----RTICPAMALFYDKPDGTLLPIAIQLFQEPAENNPIFLPSDPEYTWMLAKMFFNNAECCLHQTCTHLGFTHLVCESICISIHRSLSPSHPVFRLLGPHFLYLIAINSLAVQKLLSPEGWIDITMTMGVSGLFQILKKKWKDWRLDTDGWLPSELKKRQVDDDERLTGYMYRKDASTLHQAIWDYVSEVLTNIYGESTEKLTDDFEIQQWGACLTNCDTGVGIKGVFGDG---KFEQLDDLIKTVTSVIYLSSVAHAAANFCQYDEYAFPPNYPAILNGKAPSSKAEITESDVLSYLPNKDTTLSIMVVTKILSDRGTNG--LGDFEIQYQYEPKAVEAVEKFRARLAEISKEIKERNANMKDPYPYLDPEEVPNAISI 710
            + +   TG    AGTD  +Y  +V      S   LLD  + NDFE+G +D++ +     LG ++ + + +    +NDDW+++YI +                          K   G++++                  FP  RWI  +         + L +DD+       R KELE ++++Y         P  ID      LPR+  F ++   D V    K M  L   +F+ +  SS W +      ++ K S  I     N W+ D  FG Q + GCN  ++  CTE+P+  PVT EM +  LE + SLE+ ++   I+I++ ++L+ I          + +   + L Y      ++PIAIQL Q P + NPIFLPSD +Y W+LAK++  +++  +HQT THL  THLV E   I+++R L   HP+F+LL  H  + IAIN+ A ++L+   G  D     G  G  Q++++  KD    +    P  +K R ++  E +  Y YR D   + +AI  + +EV+ +IY E  + + +D E+Q       N     G++G    G     +  + L + +T VI+ +S  HAA NF QYD  ++ PN P  +    P++K  +T   ++  LP++  +   +     LS    N   LG +  ++  E    EA+ +FR  L  I   I ERN   + PY YL P+ +PN+++I
Sbjct:    4 YTVTVATGSQWFAGTDDYIYLSLVG-SAGCSEKHLLDKPFYNDFERGAVDSYDVTVDEELGEIQLVRIEKRKYWLNDDWYLKYITL--------------------------KTPHGDYIE------------------FPCYRWITGDVEVVLRDGRAKLARDDQIHILKQHRRKELETRQKQYRWMEWNPGFPLSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSS-WNDFADFEKIFVKISNTISERVMNHWQEDLMFGYQFLNGCNPVLIRRCTELPEKLPVTTEMVECSLERQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPSDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLC-FPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVV-DIYYEGDQVVEEDPELQD----FVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMARFRKNLEAIVSVIAERNKKKQLPYYYLSPDRIPNSVAI 674
The following BLAST results are available for this feature:
BLAST of TCONS_00068911-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX52.368e-8429.18Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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