TCONS_00068911-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068911-protein
Unique Name	TCONS_00068911-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	710

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068911-protein ID=TCONS_00068911-protein|Name=TCONS_00068911-protein|organism=Clytia hemisphaerica|type=polypeptide|length=710bp
MGVALSRRNVDFELICKTGDVKGAGTDSNVYTVIVDEDEDKSRNVLLDCN
WRNDFEQGNIDTFKIRNVPNLGRVKSILLWRDSSGVNDDWFVEYIKVRQY
TVGKSDNSTDQNGNVSVNSTEQFKDIDGNHMKETNQSTGSLRQKVEYEYP
FPINRWIEPNRTYTFTIYDSLLPQDDKNPDQRFKELEEKRERYGLKGDCG
EAPKQIDVLPREESFSNDYKWDIVGKKMRLLAQKKFLKLRTSSKWENLDA
LVDVYKGSFGIPYGYYNWKSDEKFGQQRMRGCNATMLELCTEIPKNFPVT
GEMADPLLEETSLEEALKDRRIYIINLDVLNDIICKDCRTICPAMALFYD
KPDGTLLPIAIQLFQEPAENNPIFLPSDPEYTWMLAKMFFNNAECCLHQT
CTHLGFTHLVCESICISIHRSLSPSHPVFRLLGPHFLYLIAINSLAVQKL
LSPEGWIDITMTMGVSGLFQILKKKWKDWRLDTDGWLPSELKKRQVDDDE
RLTGYMYRKDASTLHQAIWDYVSEVLTNIYGESTEKLTDDFEIQQWGACL
TNCDTGVGIKGVFGDGKFEQLDDLIKTVTSVIYLSSVAHAAANFCQYDEY
AFPPNYPAILNGKAPSSKAEITESDVLSYLPNKDTTLSIMVVTKILSDRG
TNGLGDFEIQYQYEPKAVEAVEKFRARLAEISKEIKERNANMKDPYPYLD
PEEVPNAISI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042932	XLOC_042932	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068911	TCONS_00068911	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013819	LipOase_C
IPR001024	PLAT/LH2_dom
IPR020834	LipOase_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 671..691
None	No IPR available	GENE3D	1.20.245.10		coord: 395..710 e-value: 2.4E-88 score: 296.0
None	No IPR available	GENE3D	1.20.245.10		coord: 221..299 e-value: 6.3E-11 score: 41.1
None	No IPR available	GENE3D	3.10.450.60		coord: 300..394 e-value: 1.8E-28 score: 98.5
IPR013819	Lipoxygenase, C-terminal	PRINTS	PR00087	LIPOXYGENASE	coord: 418..438 score: 46.87 coord: 398..415 score: 39.13 coord: 380..397 score: 25.87
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 267..693 e-value: 9.5E-57 score: 192.8
IPR013819	Lipoxygenase, C-terminal	PROSITE	PS51393	LIPOXYGENASE_3	coord: 165..710 score: 101.148
IPR013819	Lipoxygenase, C-terminal	SUPERFAMILY	48484	Lipoxigenase	coord: 172..710
IPR001024	PLAT/LH2 domain	GENE3D	2.60.60.20		coord: 5..166 e-value: 2.8E-24 score: 84.9
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 17..98 e-value: 5.8E-15 score: 55.8
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 10..129 score: 19.541
IPR001024	PLAT/LH2 domain	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 10..105 coord: 149..164
IPR020834	Lipoxygenase, conserved site	PROSITE	PS00081	LIPOXYGENASE_2	coord: 425..435

Blast

[Close]

BLAST of TCONS_00068911-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 2.368e-84
Identity = 211/723 (29.18%), Postives = 343/723 (47.44%), Query Frame = 0

Query:   12 FELICKTGDVKGAGTDSNVYTVIVDEDEDKSRNVLLDCNWRNDFEQGNIDTFKIRNVPNLGRVKSILLWRDSSGVNDDWFVEYIKVRQYTVGKSDNSTDQNGNVSVNSTEQFKDIDGNHMKETNQSTGSLRQKVEYEYPFPINRWIEPNRTYTFTIYDSLLPQDDKN---PDQRFKELEEKRERYGLKGDCGEAPKQIDV-----LPREESFSNDYKWDIV---GKKMRLLAQKKFLKLRTSSKWENLDALVDVY-KGSFGIPYGYYN-WKSDEKFGQQRMRGCNATMLELCTEIPKNFPVTGEMADPLLE-ETSLEEALKDRRIYIINLDVLNDIICKDC-----RTICPAMALFYDKPDGTLLPIAIQLFQEPAENNPIFLPSDPEYTWMLAKMFFNNAECCLHQTCTHLGFTHLVCESICISIHRSLSPSHPVFRLLGPHFLYLIAINSLAVQKLLSPEGWIDITMTMGVSGLFQILKKKWKDWRLDTDGWLPSELKKRQVDDDERLTGYMYRKDASTLHQAIWDYVSEVLTNIYGESTEKLTDDFEIQQWGACLTNCDTGVGIKGVFGDG---KFEQLDDLIKTVTSVIYLSSVAHAAANFCQYDEYAFPPNYPAILNGKAPSSKAEITESDVLSYLPNKDTTLSIMVVTKILSDRGTNG--LGDFEIQYQYEPKAVEAVEKFRARLAEISKEIKERNANMKDPYPYLDPEEVPNAISI 710
            + +   TG    AGTD  +Y  +V      S   LLD  + NDFE+G +D++ +     LG ++ + + +    +NDDW+++YI +                          K   G++++                  FP  RWI  +         + L +DD+       R KELE ++++Y         P  ID      LPR+  F ++   D V    K M  L   +F+ +  SS W +      ++ K S  I     N W+ D  FG Q + GCN  ++  CTE+P+  PVT EM +  LE + SLE+ ++   I+I++ ++L+ I          + +   + L Y      ++PIAIQL Q P + NPIFLPSD +Y W+LAK++  +++  +HQT THL  THLV E   I+++R L   HP+F+LL  H  + IAIN+ A ++L+   G  D     G  G  Q++++  KD    +    P  +K R ++  E +  Y YR D   + +AI  + +EV+ +IY E  + + +D E+Q       N     G++G    G     +  + L + +T VI+ +S  HAA NF QYD  ++ PN P  +    P++K  +T   ++  LP++  +   +     LS    N   LG +  ++  E    EA+ +FR  L  I   I ERN   + PY YL P+ +PN+++I
Sbjct:    4 YTVTVATGSQWFAGTDDYIYLSLVG-SAGCSEKHLLDKPFYNDFERGAVDSYDVTVDEELGEIQLVRIEKRKYWLNDDWYLKYITL--------------------------KTPHGDYIE------------------FPCYRWITGDVEVVLRDGRAKLARDDQIHILKQHRRKELETRQKQYRWMEWNPGFPLSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSS-WNDFADFEKIFVKISNTISERVMNHWQEDLMFGYQFLNGCNPVLIRRCTELPEKLPVTTEMVECSLERQLSLEQEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPSDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLC-FPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVV-DIYYEGDQVVEEDPELQD----FVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMARFRKNLEAIVSVIAERNKKKQLPYYYLSPDRIPNSVAI 674

The following BLAST results are available for this feature:

BLAST of TCONS_00068911-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068911-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LOX5	2.368e-84	29.18	Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO...	[more]

You are here

TCONS_00068911-protein (polypeptide) - C. hemisphaerica