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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00069574-protein ID=TCONS_00069574-protein|Name=TCONS_00069574-protein|organism=Clytia hemisphaerica|type=polypeptide|length=720bp
TMQVISLYSQCLDTLVKCFYSKEDCKIVLETLSASGIVQVFTSRFIGHLI
EWDSLLVTDQVVDTVSSSGLRSFGLNGCTKVTAECVSKLLNRCQNIYNLD
ISNCDQLLEPEFFDCLFIQNLKKLKINGCNRLNGSMFEKIISQCPTLENL
SLDECCNLGGFSSTCLRFQTFGSSLTSISMSGCKSVDNKFVRNLCSVTRS
NLKWLDISYTSADCLALIYLAGFTLKMACQITNLKELGGTILRDVELNEE
LNDLFEYDQNMKCASPEIKCKDCLERQREATLLEDYYKIGNIIPCNSKTN
YEDWDVISLSQEENLLSCTCKDLQQNKMTTIPIDPGLEKGQLFEPKLIYL
DINNLEFYYNEFGRKCLELFMDSNKCLEHFFISWNNLDNEMLKCISKNDI
NLKTFHLDNCSGLIGLNWDGFGQYCHSLVDLNLTGASFLTDRAIIQLIQN
NQNIRKLGLSEASISDEVVHFITDLLSEKLELIDLSWCENITNAATINLI
TKCTKLDCVNLRQGQVSSSTVEAIGKYQTNLSSIGLSGLKGLHQDLASQN
PSLLHLTSLQKLTSIDLSWNCMVSDDTIIALFGNMPVLEEAVLIGLKCLS
SNPFLPMIYNYKEWYRLKTDITKKILAEKSDLEESEKKLLRKNIHKHQFI
EADFHVPFRSKVYQPRLKNLSLSYCDKVDDDQLSDIVSVCRGTLVITGYF
GEAIEPKWRYDQYVETFIVN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp |
| IPR032675 | L_dom-like |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | LRR_CC_2 | coord: 503..527
e-value: 350.0
score: 2.5
coord: 67..92
e-value: 470.0
score: 1.5
coord: 172..197
e-value: 97.0
score: 6.8
coord: 425..450
e-value: 0.062
score: 22.4
coord: 477..502
e-value: 6.0
score: 15.8
coord: 559..584
e-value: 43.0
score: 9.6
coord: 664..692
e-value: 40.0
score: 9.8 |
| IPR032675 | Leucine-rich repeat domain, L domain-like | GENE3D | 3.80.10.10 | | coord: 43..256
e-value: 2.5E-15
score: 55.6
coord: 549..695
e-value: 2.5E-6
score: 26.1
coord: 316..548
e-value: 3.6E-17
score: 61.6 |
| None | No IPR available | SUPERFAMILY | 52047 | RNI-like | coord: 65..220 |
| None | No IPR available | SUPERFAMILY | 52047 | RNI-like | coord: 349..607 |
Blast
The following BLAST results are available for this feature:
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