TCONS_00069781-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069781-protein
Unique NameTCONS_00069781-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length581

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069781-protein ID=TCONS_00069781-protein|Name=TCONS_00069781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=581bp
MAKLSASGEWLLAESTVPNCGPVELQNNSKLRSSSFFDSRICYECGHNFR
ACDCKTCLKCGTPFMTYFGTGFIKGRSHCRVCASPVCVTCIVVIKGLEKV
CTRCHLKQKEEEICTEKALSAICEDKFGLDDSYANVSKLKTLSQKTDALF
EAVKKGLDHVMLTLFNSGCSVDSVDFKQNTPLFYAAEGGYLQCIVLLLEK
GANINAKNNVGWTPLHAVSWKGKLENYTECAKYLIEMGADVLCESNTKET
AGDVAQRCHSNADLVQILKAAEVEVAMREVGRKVTNLLASAPTLKEQQFC
RLLSTLLRYIKQHAVNAMETSPKEKKSETEKENPKEGEKEEKKKSDQKEN
EEEQEGVSQKRLCHKCRGPTLLGSSPSQSEKPKADVEPIVRPSTPKSPPP
LPPDVIQNLAEIKRLEREKSDWEERCRKLMSSIALSTKDHEKQIEELQNQ
MQHLKEENQNIKTKRDATYENKLAKLRQESEVQIKEMEERVDESEQEKTE
VLVLQTQHKLTWIPDDLVHECQISKCRAPFTKTTRKHHCRCCGRVFCAKC
SQQKVKLERFGYTKPVRVCNVCYALIDDVIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043453XLOC_043453Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069781TCONS_00069781Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR000306Znf_FYVE
IPR020683Ankyrin_rpt-contain_dom
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 405..504
NoneNo IPR availableCOILSCoilCoilcoord: 335..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..404
NoneNo IPR availableCDDcd00204ANKcoord: 148..268
e-value: 5.40293E-25
score: 99.7654
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 210..243
e-value: 0.05
score: 22.8
coord: 144..173
e-value: 880.0
score: 5.4
coord: 177..206
e-value: 2.4E-5
score: 33.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 177..209
score: 12.369
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 210..246
score: 9.912
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 507..578
e-value: 1.4E-28
score: 110.9
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 511..575
e-value: 4.5E-18
score: 65.0
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 149..241
e-value: 2.1E-13
score: 50.6
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 110..361
e-value: 7.6E-32
score: 109.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 144..280
score: 25.09
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 144..271
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 500..579
e-value: 1.3E-21
score: 75.7
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 526..577
score: 12.378
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 511..578

Blast
[Close]
BLAST of TCONS_00069781-protein vs. Swiss-Prot (Human)
Match: LST2 (Lateral signaling target protein 2 homolog OS=Homo sapiens GN=ZFYVE28 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 3.861e-16
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:  512 WIPDDLVHECQISKCRAPFTKTTRKHHCRCCGRVFCAKCSQQKVKLERFGYTKPVRVCNVCYAL 575
            W+PD+    C  + C+APFT   RKHHCR CG++FC++CS     L R+G  KPVRVC  CY  
Sbjct:  814 WVPDEACGFC--TACKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMF 875
The following BLAST results are available for this feature:
BLAST of TCONS_00069781-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LST23.861e-1650.00Lateral signaling target protein 2 homolog OS=Homo... [more]
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