TCONS_00069986-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069986-protein
Unique Name	TCONS_00069986-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	807

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069986-protein ID=TCONS_00069986-protein|Name=TCONS_00069986-protein|organism=Clytia hemisphaerica|type=polypeptide|length=807bp
ILWLHSIYLLSTADCLHSNSRYSTILGLVTLTNCPPDEQFRCVDAWKNAN
NLSQDVKLHNRTCFIDVQNSPEYLHEIVLSYSEDTESNFTEQCLNKKAKM
IFRKDEMSILFTYMSYELTRLASYLLVNEKVILLAVTFQPMLPSQLRERS
YNLFSHESSFVSENQKDSVFRVAMDMGVTYFGIVYAKEYQEDENLITKAC
KERPTDSAFCVAMRLDQEEKSNKCFKEILMDYQNLTSVNNVLQILEEDPH
MRILVAYGYGSSHQRLFKIDLFNDFMFPDNIDRKKYYFLVPFTRNFTNSS
SHYKNVHNFERFQNVPGGLVMDKFVTNTLQFKENFVDSNSAFIYLVRYMP
KEYLFLIKMVIPNYDSSVGITWEVWNDVPMVKREKLANIFLSSDKIMNDL
LATWKRLHNFKENTADDYMTRNEFNPSVAIQRSNPYCNLTRPKTCQKGYE
LRHGLYHEAKWQNSYGWHCGACAEKQYKEDEGMSKCKTCNYPFTTNEAKT
KCFDPYNRDYMKLHDPVMIVITILSAMTGLLIMFTSIVFIKLRDTPIVKA
ANRSMTVVQLFGHLLLATVTPILFLEEPTPWKCFLKPIVTGLCFTSTVSV
NLAKTQKLHVIFNSKMVHSKKKQKAIAILEWLIVGMTILIDLAILASTFQ
NGRPVPETHRNFATQTREISCTNNNHIIIQIVYILVLVLANGIQAVRARN
LPSHFKETTHVIYSSFTSVLLLGALSAIYFTQKSAKTRDVIMWASILTMN
FLHFSLIYAYKLYVVLLKPNKNTKKAFQEKRKKNFDEKMHRVKDIPALTR
IKIPTRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043565	XLOC_043565	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069986	TCONS_00069986	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR017978	GPCR_3_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 545..567 score: 40.22 coord: 683..706 score: 30.73 coord: 591..612 score: 33.24
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 530..763 e-value: 1.7E-30 score: 106.4
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 517..781 score: 25.622

Blast

[Close]

BLAST of TCONS_00069986-protein vs. Swiss-Prot (Human)
Match: GRM1 (Metabotropic glutamate receptor 1 OS=Homo sapiens GN=GRM1 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 2.839e-26
Identity = 77/321 (23.99%), Postives = 158/321 (49.22%), Query Frame = 0

Query:  460 KWQNSYGWHCGACAEKQYKEDEGMSKCKTCNYPFTTNEAKTKCFDPYNRDYMKLHDPVMIVITILSAMTGLLIMFTSIVFIKLRDTPIVKAANRSMTVVQLFGHLLLATVTPILFLEEPTPWKCFLKPIVTGLCFTSTVSVNLAKTQKLHVIF--NSKMVHSKKKQKAIAILEWLIVGMTILIDLAILASTFQNGRPVPETHRNFATQTREISCTNNNHIIIQIVYILVLVLANGIQAVRARNLPSHFKETTHVIYSSFTSVLLLGALSAIYFTQKSAKTRDVIMWASILTMNF-LHFSLIYAYKLYVVLLKPNKNTKKAF 777
            K + S  W C AC E +Y +DE    CK C+  +  N   T C +P    Y++  +   I+    S +  L+ +F +++F+  RDTP+VK+++R +  + L G + L  V P   + +PT   C+L+ ++ GL      S  + KT ++  I   + K + ++K +   A  + +I  + I + L ++ +      P+P        +   I  T+N  ++  + Y  +L+++    A + RN+P++F E  ++ ++ +T+ ++  A   IYF         +I     ++++  +    ++  K+Y+++ KP +N + AF
Sbjct:  538 KGEVSCCWICTACKENEYVQDE--FTCKACDLGWWPNADLTGC-EPIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAG-IFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYF----GSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPERNVRSAF 850

The following BLAST results are available for this feature:

BLAST of TCONS_00069986-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069986-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM1	2.839e-26	23.99	Metabotropic glutamate receptor 1 OS=Homo sapiens ...	[more]

You are here

TCONS_00069986-protein (polypeptide) - C. hemisphaerica