TCONS_00070264-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070264-protein
Unique Name	TCONS_00070264-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	675

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070264-protein ID=TCONS_00070264-protein|Name=TCONS_00070264-protein|organism=Clytia hemisphaerica|type=polypeptide|length=675bp
MNRGIEIVNSHEQTTCLVTNQNTCSVSQQKTHAEQFVAVFGTFFSFSTIP
LSSLLGAFHIPLLSYRASSPLLSKRTDHGTFYRSVASDESIIEALVDVID
QFGWTYIYAIGADDEYGKIGLQLLQKHTEKMDICLTGEVYIPIDSKDTQR
IAKEIALDMQKQENATVVVMFNYALKSGEYILHEAEKLGLDRLYLTGEAW
NPEVLSATNITKTQMESILTVSVENGNPNQEFLDYVNKTINSCYGKDIWL
KQYIFQQSGCLVTSNDAFGRLTGKDANNETCEIESNEILKLILNENPSQI
NNLIDLVDSVSHALDDVTSKYCPSSATNCGANINPIQVNEALKTVDFTTR
QNKPYKYNTKGSPVYVSYSIEQVQYNNNTGQFKYRPVGRWESQREKRLNI
DKAKIRIPSWSGNEMPTSSCSEKCVAGEKITAKQRCCWKCERCPKGSMST
KPNSLQCSPCAEGYHTKDFINCELTPIKHITLKDTIGLTTTIISCIGIVL
MFLCLYLLRYLKETTIVKSTKPRFIILSTLLVIASFSYTFLHLVIPSRGV
CRIRYISFHALLTLFSLVLLLKNRSVSRFISKFVNNKQNNTLADILISTF
ILTLETIILLTWQFMESFPITKTESNYESFEECELQFSLYRMLAFVLPFV
IXQNLLDAWNKKFCSARLTFKGTAM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043752	XLOC_043752	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070264	TCONS_00070264	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR017978	GPCR_3_C
IPR011500	GPCR_3_9-Cys_dom
IPR001828	ANF_lig-bd_rcpt
IPR028082	Peripla_BP_I

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 673..675
None	No IPR available	GENE3D	3.40.50.2300		coord: 11..363 e-value: 7.1E-35 score: 120.2
None	No IPR available	CDD	cd06269	PBP1_glutamate_receptors_like	coord: 37..227 e-value: 3.50354E-33 score: 128.402
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 594..617 score: 13.67 coord: 107..124 score: 24.65 coord: 72..91 score: 33.75 coord: 91..107 score: 33.64 coord: 39..65 score: 36.69
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 498..647 e-value: 1.1E-7 score: 31.8
IPR011500	GPCR, family 3, nine cysteines domain	PFAM	PF07562	NCD3G	coord: 416..464 e-value: 6.6E-9 score: 35.5
IPR001828	Receptor, ligand binding region	PFAM	PF01094	ANF_receptor	coord: 30..376 e-value: 1.3E-38 score: 132.9
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	53822	Periplasmic binding protein-like I	coord: 12..398

Blast

[Close]

BLAST of TCONS_00070264-protein vs. Swiss-Prot (Human)
Match: CASR (Extracellular calcium-sensing receptor OS=Homo sapiens GN=CASR PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 9.037e-41
Identity = 149/587 (25.38%), Postives = 271/587 (46.17%), Query Frame = 0

Query:   32 HAEQFVAVFGTFFSFSTIPLSSLLGAFHIPLLSYRASSPLLSKRTDHGTFYRSVASDESIIEALVDVIDQFGWTYIYAIGADDEYGKIGLQLLQKHTEKMDICLTGEVYIP--IDSKDTQRIAKEIALDMQKQENATVVVMFNYALKSGEYILHEAEKLGLDRLYLTGEAWNPEVLSATNITKTQMESILTVSVENGN-PN-QEFLDYVN--KTINSCYGKDIWLKQY--IFQQSGCLVTSNDAFGRLTGKDANNETCEIESNEILKLIL-NENPSQIN-------------NLIDLVDSVSHALDDVTSKYCPSSATNCG--ANINPI---QVNEALKTVDFTTRQNKPYKYNTKGSPVYVSYSIEQVQYNNNTGQFKYRPVGRWE--SQREKRLNIDKAKIRIPSWSG--NEMPTSSCSEKCVAGEK---ITAKQRCCWKCERCPKGSMSTKPNSLQCSPCAEGYHT-KDFINCELTPIKHITLKDTIGLTTTIISCIGIVLMFLCLYLLRYLKETTIVKSTKPRFIILSTLLVIASFSYTFLHLVIPSRGVCRIRYISFHALLTL-FSLVLLLKNRSVSRFISK 582
            H    +AV G   S  +  +++LLG F+IP +SY +SS LLS +    +F R++ +DE    A+ D+I+ F W ++  I ADD+YG+ G++  ++  E+ DIC+     I    D ++ Q + + I     +   A V+V+F+        I     +    +++L  EAW    L A       +   +  +++ G  P  +EFL  V+  K++++ + K+ W + +    Q+        D F  L G + + +     S     L   +EN S +              N+   V S++HAL D+ +          G  A+I  +   QV + L+ ++FT    +   ++  G  V  +YSI     +   G   ++ VG +   +++ +RL I++ KI    WSG   E+P S+CS  C+AG +   I  +  CC++C  CP G  S + ++  C+ C + + + ++  +C    I+ ++  +  G+  T+ + +GI L    L +    + T IVK+T      L    ++  FS +   +  P    CR+R  +F     L  S +L+  NR +  F +K
Sbjct:  134 HIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQFKSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEERDICIDFSELISQYSDEEEIQHVVEVI-----QNSTAKVIVVFSSGPDLEPLIKEIVRRNITGKIWLASEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKVHPRKSVHNGFAKEFWEETFNCHLQEGAKGPLPVDTF--LRGHEESGDRFSNSSTAFRPLCTGDENISSVETPYIDYTHLRISYNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFDECGDLV-GNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKIL---WSGFSREVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDETDASACNKCPDDFWSNENHTSCIAKEIEFLSWTEPFGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRELSYLLLFSLLCCFSSSLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAK 709

The following BLAST results are available for this feature:

BLAST of TCONS_00070264-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070264-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CASR	9.037e-41	25.38	Extracellular calcium-sensing receptor OS=Homo sap...	[more]

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TCONS_00070264-protein (polypeptide) - C. hemisphaerica