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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003943 ID=TCONS_00003943|Name=TCONS_00003943|organism=Clytia hemisphaerica|type=transcript|length=2504bp
TGCATAGATTTCccatttttaaaattgaatatttatAGAGTAAGAATAAG
CTGCTCGAgctgttttaaaaaagaaactgtATAGAATATCAGGAAGAAAG
AGTAGAGAAAAGGGGAgtttgaaaattggtgaaaatccTGTATGAAAGAG
AATAAAGGAATACAAGATGCCTCCTAAACATATTATGATTTCATACAATT
GGGACATCCAAGACCTGGTCAAGAAAGTTGTGAGTGGGTTAAAATCACGT
GGTATCCCGGTATGGATGGACTTAGATGCCATGAGTGGTGATATCAATTC
AAGCATGGCGGAAGGAGTAGACGGTTGCAAGGCTATCGTTTGTTTCATGA
CACAAAAATATCAAGACAGTAAGAACTGCAAACGAGAATTGACATACGCT
GACCAACAAGAAAAAGATATTATCCCTTGCATGGCTCAAAAAGATTACAA
AGCTCAAAGCTGGTTGGGAATTGTCACTGCTGGACTTTTGTGGATGAACT
TCAGGGACGATAGTCAACTAGAAACCAAAATTGATTCTCTAGCTAAGGAA
ATAATCTCTCAAACCGGAAGTGACTGGATGAAAGGCGTAACAGGCTCCAC
AGCTAGGCCAGCCGTTGCGGAATCAAGGCCAAAAGATCTGGAAGATAAAG
TGAGCCGGGCTTTCAAGCATTGCTCAACTGGACAGTTCTTGGCAGAATCG
ggccaaacaaaatttcatccaGCCAGTGGCAACAGAAACAACTTGGTCTT
ACGCAATCAAGCAGAAGCTACAAGTTTCTGGGTGCAAGAACGAAAGGGTG
GGAAGGGAGaaattattttcttcaaaaattacagCACTAATGGATATTTA
GGCTATGATGCAAACGGCGACTACACTTACACCAAAGCCCAACATTACGG
CGCCGAAGAGTGGACACTGAAGGTTGATGAATCTGACAATACAGGAAAGA
GGGCTGTCGTTATTTTCGCCGTTTACGGTAAAAAATATCTCGGaattaaa
aatggaaaattatcAGGATTCCCAAGTCTAAATCCTGCTTGCAGATGGTA
TTtggaataattttttaaaatttttgtttgctattgtttgaaaattgtct
attaatattttattaaatttcctAAGGGTATAACCTAACTAACCTAAGTA
AGAATTGTAGTGCGTaaataatatttaattttttctcaattaaaacttga
atcttaaggtgggagtcacatgaaggattgagaaaattgaaattttacat
ttttcatcataTCTTTTGAAGCAGAAAAGATTTCTAAATAAAACTTTCCA
GAAATGTAATATAACTATAGAGaatgtgaaaaattaaaaaaaaattctaa
aaatagccaagacgggggtaatatcagccagggggtaatgCACTATCGAA
ATACTATGgcagcgttttagaaaaatctataaaagctatttcaaaaattt
tttttggaggtTGCTAGTATTTGGATAAGCTGTGGAatgaatggaatttt
ttttcaaaatttcattccagggggtctggaaccttaaaaatggaaaattt
aagttttttagagtttaaaaattgaaaagtgattttttcaaaaatctact
cCATTCATTCCATAGCAAACCATAAATGGAGCaacccctgaaaatttcat
gatcatAGCTCTTTCCAATCCTGAAAAAACGTTGCCAAGGTGTGCGAAAA
CCCCCTGAaacctattttgagaaaatggtccGTAAAGTCAGAATTGAGAT
ATATATCTCTATTTCTCTGTAATAAATCaaccgttttacaaaattctttc
cGTGTTTGACTAAAATGGAATAAAGTACTACTTTATATACTTTAGAAAGG
GCTTAGAAATACCAAAATAGTccagaaattccaaattatcactttcacgt
gatgcgcgccaatccttaaaattttgtgccaaactccacgtcaacatcta
tttaagtcaattttaatgTGTTTTCACAACAAAAACCACATTTTCAATGT
AATAGATCAACCTAGTGTATTTTCCTCACTGCATCTGTCAGTTATAAGTT
AATTTAAAGTTGATCTGTAGTGATACAAGAATCCACTTGTACTTGGACGT
CTAGCCGTAAGCCGTGCACAATTTCTCCTCGTGAATGTAAATAATCCAGA
GGGTGGAGGGAGCGTCCCAGACCTTCAATAATTCATCACACACAATTGTT
AAACCAGCCTCCAGGCTTTCAATTTCCTTAACACTTGGATCTTTGAATag
atacatcattgaatatgCCTTCGGTCCATTGTTTgttcttcaaagttttt
cgGTGTCAAACTAAGTTCATCGGAAACGTTGAGTTTGAGAATCAAGTCTT
TGGTTTCACCTAGCTCAAGCTTCCTTAGTTGAGAAGAATGACATTAAAGA
GCTAAAGATGTCATCAGTCAGTCCAACATTGCCAAATTCAAACAGTTTTC
TTGTCAAAAACACTGCTGACAGCCTccaaatttgtgtgtttttaaaaaat
atta Run BLAST on NCBI protein sequence of TCONS_00003943-protein >TCONS_00003943-protein ID=TCONS_00003943-protein|Name=TCONS_00003943-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MPPKHIMISYNWDIQDLVKKVVSGLKSRGIPVWMDLDAMSGDINSSMAEG
VDGCKAIVCFMTQKYQDSKNCKRELTYADQQEKDIIPCMAQKDYKAQSWL
GIVTAGLLWMNFRDDSQLETKIDSLAKEIISQTGSDWMKGVTGSTARPAV
AESRPKDLEDKVSRAFKHCSTGQFLAESGQTKFHPASGNRNNLVLRNQAE
ATSFWVQERKGGKGEIIFFKNYSTNGYLGYDANGDYTYTKAQHYGAEEWT
LKVDESDNTGKRAVVIFAVYGKKYLGIKNGKLSGFPSLNPACRWYLE Run BLAST on NCBI transcript from alignment at sc0000038:207188..215642- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003943 ID=TCONS_00003943|Name=TCONS_00003943|organism=Clytia hemisphaerica|type=transcript|length=8455bp|location=Sequence derived from alignment at sc0000038:207188..215642- (Clytia hemisphaerica)
TGCATAGATTTCCCATTTTTAAAATTGAATATTTATAGAGTAAGAATAAG
CTGCTCGAGCTGTTTTAAAAAAGAAACTGTATAGAATATCAGGAAGAAAG
AGTAGAGAAAAGGGGAGTTTGAAAATTGGTGAAAATCCTGTATGAAAGGT
AGGTTACGAAAGTTGTTTTGACAAAAATTGAAAATACTTTTTGAAAACAA
ATTTTAACACAAACTTTACAAGGAAATTTGTGAGGCCTTGGATTGAGGAC
CGAACTTGAAGTGATTATGGTAAAATAATGGAGTACATTGAGATTTAGCC
AGAGTGTTAGGCGTGATGTCTAACCAACCTGCAAATTTTCACTACACTTA
TACAATACAGACGTCCAATAACCCCCTTCTCACAGACCCACTGGGAACCC
TTCCCACTGGAAAAATTGGCAAAAATATCTCCCCAATTGTGCTATTTCTT
CTATCCCTCTGAATCTTCTGGCTAAAAAACAATGGAATTCAAGTCCCCAG
CCATAAAAAATATGGGAATATCATTCCCAGTCCAATTTTGGTCCGGTATT
TTTACCACTACTAGCTGATAAAATCCCAACGGGTCTGTGAGAAGGGGGTG
TCCCAATCGCAAACAAATCTTCGTTGCAGTTCGTTTTATCGCATCCAATC
AGATTTGAGTATTAAGGATGCCAATGAAAACGACAATTTCTCGTTTTTGT
GTTTTGATAGAATGTTACGCTCCAAACAAAGAGAAAAAGTTTGTCATTTT
TGAATGCTCTCGAGAATAACGGCTACCTTAACGGAACTAATTTTGGCGGG
AATTAATTTTGGCGAGCGGCGGCGAAAATATTTAAGAATTTTAATTTTGG
CGGGAACTAATTATGGCGAATAGTGAATGTTTTTAATTTTGGCGGGAACT
AATTTTGGCGAATGACAGTGTAAATCTGTTCTATGTTGCCTTATTTTGAG
CAATTTTGATGAATTTCAGGGTTTATTTAGGCAAGGAAACAAAAAATTTA
ATTTTGGCGGGAACTTATTTTGGCGAGTGCGCAAAATGTTTAATTTTGGC
GGGAACTAAATTTGGCGAATTTCGTCTAAATTCGCCAAATTCGCCAAAAT
TAGTTCCCTTTAAGGTATGTTATTGTTTTGGCCTTCGATAACAAAAAATA
TTTCTTATCGTCTTGATTCGATTTGTGGCTGACACTGACCCCTAAAAAGA
AAGATCTTTCGGCAAAGGCGAGCATGTCTTTACCGAGTTTGTTTTCAACA
GTTTACATCTGATTAAATTATGCTATTAGTTTTCGGTCTGAATCTTGGCA
CGTTGAGATTTACAGTGGTTTTAAAGCTAAATATATTACTTGATTCCAGC
TTAACCTATTCTTCTTGCAGAGAATAAAGGAATACAAGATGCCTCCTAAA
CATATTATGATTTCATACAATTGGGACATCCAAGACCTGGTCAAGAAAGT
TGTGAGTGGGTTAAAATCACGTGGTATCCCGGTATGGATGGACTTAGATG
CCATGAGTGGTGATATCAATTCAAGGTGAAAGAAATATATACATCCCAGT
GTCACAAACCCGGGGGACTCAAACACAACTGGAAATTTGGCCCTTTTCGT
TCCTGGTGGGGAAAATACACTACAATATCCCAGTAGGAAGTTGATCTTGA
TTTCATCAAAAAAAATCATATCGCAACCATTTTGATTCCATATAACCATT
CCTCATGGTGAGCCGGGACAATAGAATTTCGATCTCTATTAGGATTTCGA
TAGAAATCTTCATCCCGCTTTCCACCAGGGCATTGTTACAGGGATGTAAA
TACAGTTGATCCTCTTCTGATTTTCAGACTTATACTTAATTGTCTTACAG
TAATACAAAAAACTTTTTCGTTAGTTTTAATTTGCGAAATACTTTAAAAC
CTGTCTCGCTGATGCCTTACCCGTTTTTTTTTTTTTTAAGAAACACACTT
TTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAACATCTAAGAA
ACATGCTGAGCCTGAGAATGAGAAAATAACATTTTTTAATTCGGTTTTTC
TTAAGACCCTTCCAATCCAGCCTTCCATGAGGCTGATTATGTCAAAAAGT
TTAGAAACATGTAAGAAACATTCAAGGCTCAAAAGGCCGATTTCTTAAGA
AACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAAAAACGTGT
ACAAAACGATTCATTTTTACACCGACGACAATGATTTGGATAGAGCGGAT
AGCTGAAATTGCAACAAGGTCTTTAGGCAAACTAAGTGCTCATAAGAAGT
TCTTATTGGGGACCCCTATTTAGAATTATACTGAAATTTATATCTTTCTC
GAACCCAGTTCCTTAGTTTGCTTGATACACCTTTTTGACCGCAGTCGCGC
GTTCAGGTGCGTGCCATTTAATTATTTAATTATCCCACTAAACTCGATCC
AATCCTTTTTTGACACATTTTTCTATTGCGAAAAAAGGACTGGGACGGTT
TTAGTGGGATAAAGCGGACAATTGGCAGCTACGGTCGAAAAGGTGTATTT
TGATAGCGCTCTCGATTACGTCCATCAATAAAATAAAAGTGGTGCAATAG
TTCATATTTTAATAAACTGTGTACTTTATTTTCACTTTTAAACAGCATGG
CGGAAGGAGTAGACGGTTGCAAGGCTATCGTTTGTTTCATGACACAAAAA
TATCAAGACAGTAAGAACTGCAAACGAGAATTGACATACGCTGACCAACA
AGAAAAAGATATTATCCCTTGCATGGCTCAAAAAGATTACAAAGCTCAAA
GCTGGTTGGGAATTGTCACTGCTGGACTTTTGTGGATGAACTTCAGGTAC
CCTTTGATTCTCACATAATCTCACAGCAATCAACAAAATTATTTTTTCAG
GTTAAGAAGGTTGCGAGGTGGTTCTTCGAGTATCCATTTTTTCAAGAATA
ACTTATTCCAGCAATCTACTTTAATGGGATATACTTTCGCGGGGATTAAA
TTTCGCGGGGACTTAATTTCGCGTGTAGCACTATTGGGTGGGAATATTTT
CATGATTTTTTGACTTCTACTGTCAAATCATGCATGTTGGTTGTTGAAAT
ACACATTATTTGCGCTTCTTTGACGCAGGTAACCATTCAAAAAGTATTAT
TTTACATATTTAATCCCCGCGAAAGTTTATCCAATTAAAGAATAGACCTA
AGAATAAGAAATTAAAATTCACCGACTTGGCAAGATATTTAAAACTTAAA
TCTCGGTTTGTTCTGCTTTGATAGTGTCATATTTCTTTGATAATATGTAA
TATTTTCATATTAAGGGGGTAGTCATATCAGATTTTGAAAATTGGTGAAA
AATTTATCAATTTCGGGATTTAGGGCTTTTTAGGATCCTTTATCCTTCCT
GAACATACCCTGAAAATTTCAAGGCCGTAGCATAAATATCTGCCGATATA
TTGGGTTTCTTATGAGCCGTGATATACAATTTTCTCCTTAGCAACGGGAA
ATCGCATCCGTTGCTAGGGCCTCATTTCCGTATGGGATGAGCTGGAGTTT
TTACAAGATACTTCACTAATTGGTCATTCAAAGTGATAGAGATGACGCGT
TCTTTAGAAAAAGTAATAAGATTCTTTTATTACATCTTAACGACCACCCA
AATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTGGAAAGTTTCATT
GAAAAATATTTACTACTTCACAAGATATAACAAAAAGTTTAAAAAATGAC
ATTTCAAATTTCTCATATGACTACCCCCTTAAATCTTGATGATGTGTACA
GATTTTTATCATGAGAAAATTTGGTATATTGCAAATGACATTGTCTCAAA
CGTTCATGGATTGTTTACCGTGAATCGTATATCGGGTTTTCCTTGAAATA
CAACCTGTGATTCTCTAATTCGATCTTCAAGGGACTAAAAATGTTCCTCG
AATTACAGAAAGATTTGAATTACAGCGAATACTTTGTACAACTTTCCAGC
TAAGGGGACCAATAATTATATTCGAAATACAGAAAAATTCGAATAATTTA
ATAGAGGTTTGAATTGAAAATCACTGCAGATAGATTTTTTCGCAATACGC
TATCACAGTGTAGGGGGGGGGGGGGGGGGGGGGGGGTTTGTAGGGGTTCG
AAATACCGTTTTCCCGTCAAAATTTTTGCTGAATCCCGGAATCCCGAAAA
TTGGAAAAATAATAACACCGTCACACCGGCTTGTACAGGGCAAAAATGTA
CCTAAATACCGTCACCGTCTGATTTTAAAATACCGTTTTCCCGTCTCTTT
TTTCGTCAAATCCCGTAATTAATACCGTACTAAAAAAGGGCCTATCCCGT
CACACCGTAAAAGTACATAAAAGTACAAACCCTCAGTGTATATTCAGTAT
AACTGACGATAAAGATTGTATGTTCGAATCTTTTTCATTTTTTTTTTATT
TTCACGTTGTAGGGACGATAGTCAACTAGAAACCAAAATTGATTCTCTAG
CTAAGGAAATAATCTCTCAAACCGGAAGTGACTGGATGAAAGGCGTAACA
GGCTCCACAGCTAGGCCAGCCGTTGCGGAATCAAGGCCAAAAGATCTGGA
AGATAAAGTGAGCCGGGCTTTCAAGCATTGCTCAACTGGACAGTTCTTGG
CAGAATCGGGTAAATAAATTATTATTCAACATCAAACTCAGGGGGGAGCA
AAGAACAAACCGATATTTTCTGAAAGTAGATTCAACTGGAGTCAGTTTTT
TGTCAATTTATTGAAGCATGGGAACAAATGAATTCCTGTATCATGCCGAA
AAGAAGCAAGTGTATTTGAAACAAATTGCACTGAAATTTCCTTTTTAACT
GCCAAATGAATTTTCTTTCTATTTTCAGGCCAAACAAAATTTCATCCAGC
CAGTGGCAACAGAAACAACTTGGTCTTACGCAATCAAGCAGAAGCTACAA
GTTTCTGGGTGCAAGAACGAAAGGGTGGGAAGGGAGAAATTATTTTCTTC
AAAAATTACAGCACTAATGGATATTTAGGTAACACAAATTTTACTCTTTT
TAGCATTATCAATCACCCTCGTTAAGCTTGGGGAGTCGAGCCCTTTTATA
TAAATGACCTTATGACCAGGTCGAGCTTGCTCGGCTTGCGATGACACGTT
CTCTCCACTGTTGCTGATGTCCCATGGCATTTGGAAGGTCTTCCTTTGAG
CAGCCTGCACCATCTCTCAGTATGTTGATGTAGGTTTTGTTTGGTCTACC
CCTTGTTCTTTTTCCGTGAAAAGGCTCCCAAAGTATTACCTCTGAGGCTA
GCTCATTTTTGCCCCGCCAGCCGTGGCCAGAAAAACGTAGGCGCTGTTCT
CGGATTGTTGATGTTATAATGATCTTATACGGTCACATTAAGTCATATCA
AGAATGAAGAATGGCTAGTGACTGATGGTAAATGATATATGATACCAAGG
AAATTTTAAACCGTCCAGTAACCTGAGCTCCTTGCATGTTTTTTATCATT
ATTATGCTATAGTTCTTGTTAAAAATCCCTCCAAAGACTGTTAACAGGGG
TTGGAGCGGAGGATTATTGGGCTGTGAGCTACCGGGCACGTGTCGAGCCT
CGGACTTTTAATAGAACGAAAAAAGGGAACTTTTGTGTTGGGACTACTTT
GACCAAATTTTGTTTTTTCAAGGGCAAAAAAGTTGAAATTTTCCAAATTT
TCTGACCCTTAGTGTGACTGAAATTAGCCTCGTTCGAATTTTCTAATTGC
AGGCTATGATGCAAACGGCGACTACACTTACACCAAAGCCCAACATTACG
GCGCCGAAGAGTGGACACTGAAGGTTGATGAATCTGACAATACAGGAAAG
AGGGCTGTCGTTATTTTCGCCGTTTACGGTAAAAAATATCTCGGAATTAA
AAATGGAAAATTATCAGGATTCCCAAGTCTAAATCCTGCTTGCAGATGGT
ATTTGGAATAATTTTTTAAAATTTTTGTTTGCTATTGTTTGAAAATTGTC
TATTAATATTTTATTAAATTTCCTAAGGGTATAACCTAACTAACCTAAGT
AAGAATTGTAGTGCGTAAATAATATTTAATTTTTTCTCAATTAAAACTTG
AATCTTAAGGTGGGAGTCACATGAAGGATTGAGAAAATTGAAATTTTACA
TTTTTCATCATATCTTTTGAAGCAGAAAAGATTTCTAAATAAAACTTTCC
AGAAATGTAATATAACTATAGAGAATGTGAAAAATTAAAAAAAAATTCTA
AAAATAGCCAAGACGGGGGTAATATCAGCCAGGGGGTAATGCACTATCGA
AATACTATGGCAGCGTTTTAGAAAAATCTATAAAAGCTATTTCAAAAATT
TTTTTTGGAGGTTGCTAGTATTTGGATAAGCTGTGGAATGAATGGAATTT
TTTTTCAAAATTTCATTCCAGGGGGTCTGGAACCTTAAAAATGGAAAATT
TAAGTTTTTTAGAGTTTAAAAATTGAAAAGTGATTTTTTCAAAAATCTAC
TCCATTCATTCCATAGCAAACCATAAATGGAGCAACCCCTGAAAATTTCA
TGATCATAGCTCTTTCCAATCCTGAAAAAACGTTGCCAAGGTGTGCGAAA
ACCCCCTGAAACCTATTTTGAGAAAATGGTCCGTAAAGTCAGAATTGAGA
TATATATCTCTATTTCTCTGTAATAAATCAACCGTTTTACAAAATTCTTT
CCGTGTTTGACTAAAATGGAATAAAGTACTACTTTATATACTTTAGAAAG
GGCTTAGAAATACCAAAATAGTCCAGAAATTCCAAATTATCACTTTCACG
TGATGCGCGCCAATCCTTAAAATTTTGTGCCAAACTCCACGTCAACATCT
ATTTAAGTCAATTTTAATGTGTTTTCACAACAAAAACCACATTTTCAATG
TAATAGATCAACCTAGTGTATTTTCCTCACTGCATCTGTCAGTTATAAGT
TAATTTAAAGTTGATCTGTAGTGATACAAGAATCCACTTGTACTTGGACG
TCTAGCCGTAAGCCGTGCACAATTTCTCCTCGTGAATGTAAATAATCCAG
AGGGTGGAGGGAGCGTCCCAGACCTTCAATAATTCATCACACACAATTGT
TAAACCAGCCTCCAGGCTTTCAATTTCCTTAACACTTGGATCTTTGAATA
GATACATCATTGAATATGCCTTCGGTCCATTGTTTGTTCTTCAAAGTTTT
TCGGTGTCAAACTAAGTTCATCGGAAACGTTGAGTTTGAGAATCAAGTCT
TTGGTTTCACCTAGCTCAAGCTTCCTTAGTTGAGAAGAATGACATTAAAG
AGCTAAAGATGTCATCAGTCAGTCCAACATTGCCAAATTCAAACAGTTTT
CTTGTCAAAAACACTGCTGACAGCCTCCAAATTTGTGTGTTTTTAAAAAA
TATTA Coding sequence (CDS) from alignment at sc0000038:207188..215642- >TCONS_00003943 ID=TCONS_00003943|Name=TCONS_00003943|organism=Clytia hemisphaerica|type=CDS|length=4470bp|location=Sequence derived from alignment at sc0000038:207188..215642- (Clytia hemisphaerica)
GCTATGATGCAAACGGCGACTACACTTACACCAAAGCCCAACATTACGGC
GCCGAAGAGTGGACACTGAAGGTTGATGAATCTGACAATACAGGAAAGAG
GGCTGTCGTTATTTTCGCCGTTTACGGTAAAAAATATCTCGGAATTAAAA
ATGGAAAATTATCAGGATTCCCAAGTCTAAATCCTGCTTGCAGATGGTAT
TTGGAATAAGCCAAACAAAATTTCATCCAGCCAGTGGCAACAGAAACAAC
TTGGTCTTACGCAATCAAGCAGAAGCTACAAGTTTCTGGGTGCAAGAACG
AAAGGGTGGGAAGGGAGAAATTATTTTCTTCAAAAATTACAGCACTAATG
GATATTTAGGGACGATAGTCAACTAGAAACCAAAATTGATTCTCTAGCTA
AGGAAATAATCTCTCAAACCGGAAGTGACTGGATGAAAGGCGTAACAGGC
TCCACAGCTAGGCCAGCCGTTGCGGAATCAAGGCCAAAAGATCTGGAAGA
TAAAGTGAGCCGGGCTTTCAAGCATTGCTCAACTGGACAGTTCTTGGCAG
AATCGGCATGGCGGAAGGAGTAGACGGTTGCAAGGCTATCGTTTGTTTCA
TGACACAAAAATATCAAGACAGTAAGAACTGCAAACGAGAATTGACATAC
GCTGACCAACAAGAAAAAGATATTATCCCTTGCATGGCTCAAAAAGATTA
CAAAGCTCAAAGCTGGTTGGGAATTGTCACTGCTGGACTTTTGTGGATGA
ACTTCAGATGCCTCCTAAACATATTATGATTTCATACAATTGGGACATCC
AAGACCTGGTCAAGAAAGTTGTGAGTGGGTTAAAATCACGTGGTATCCCG
GTATGGATGGACTTAGATGCCATGAGTGGTGATATCAATTCAAGGCTATG
ATGCAAACGGCGACTACACTTACACCAAAGCCCAACATTACGGCGCCGAA
GAGTGGACACTGAAGGTTGATGAATCTGACAATACAGGAAAGAGGGCTGT
CGTTATTTTCGCCGTTTACGGTAAAAAATATCTCGGAATTAAAAATGGAA
AATTATCAGGATTCCCAAGTCTAAATCCTGCTTGCAGATGGTATTTGGAA
TAAGCCAAACAAAATTTCATCCAGCCAGTGGCAACAGAAACAACTTGGTC
TTACGCAATCAAGCAGAAGCTACAAGTTTCTGGGTGCAAGAACGAAAGGG
TGGGAAGGGAGAAATTATTTTCTTCAAAAATTACAGCACTAATGGATATT
TAGGGACGATAGTCAACTAGAAACCAAAATTGATTCTCTAGCTAAGGAAA
TAATCTCTCAAACCGGAAGTGACTGGATGAAAGGCGTAACAGGCTCCACA
GCTAGGCCAGCCGTTGCGGAATCAAGGCCAAAAGATCTGGAAGATAAAGT
GAGCCGGGCTTTCAAGCATTGCTCAACTGGACAGTTCTTGGCAGAATCGG
CATGGCGGAAGGAGTAGACGGTTGCAAGGCTATCGTTTGTTTCATGACAC
AAAAATATCAAGACAGTAAGAACTGCAAACGAGAATTGACATACGCTGAC
CAACAAGAAAAAGATATTATCCCTTGCATGGCTCAAAAAGATTACAAAGC
TCAAAGCTGGTTGGGAATTGTCACTGCTGGACTTTTGTGGATGAACTTCA
GATGCCTCCTAAACATATTATGATTTCATACAATTGGGACATCCAAGACC
TGGTCAAGAAAGTTGTGAGTGGGTTAAAATCACGTGGTATCCCGGTATGG
ATGGACTTAGATGCCATGAGTGGTGATATCAATTCAAGGCTATGATGCAA
ACGGCGACTACACTTACACCAAAGCCCAACATTACGGCGCCGAAGAGTGG
ACACTGAAGGTTGATGAATCTGACAATACAGGAAAGAGGGCTGTCGTTAT
TTTCGCCGTTTACGGTAAAAAATATCTCGGAATTAAAAATGGAAAATTAT
CAGGATTCCCAAGTCTAAATCCTGCTTGCAGATGGTATTTGGAATAAGCC
AAACAAAATTTCATCCAGCCAGTGGCAACAGAAACAACTTGGTCTTACGC
AATCAAGCAGAAGCTACAAGTTTCTGGGTGCAAGAACGAAAGGGTGGGAA
GGGAGAAATTATTTTCTTCAAAAATTACAGCACTAATGGATATTTAGGGA
CGATAGTCAACTAGAAACCAAAATTGATTCTCTAGCTAAGGAAATAATCT
CTCAAACCGGAAGTGACTGGATGAAAGGCGTAACAGGCTCCACAGCTAGG
CCAGCCGTTGCGGAATCAAGGCCAAAAGATCTGGAAGATAAAGTGAGCCG
GGCTTTCAAGCATTGCTCAACTGGACAGTTCTTGGCAGAATCGGCATGGC
GGAAGGAGTAGACGGTTGCAAGGCTATCGTTTGTTTCATGACACAAAAAT
ATCAAGACAGTAAGAACTGCAAACGAGAATTGACATACGCTGACCAACAA
GAAAAAGATATTATCCCTTGCATGGCTCAAAAAGATTACAAAGCTCAAAG
CTGGTTGGGAATTGTCACTGCTGGACTTTTGTGGATGAACTTCAGATGCC
TCCTAAACATATTATGATTTCATACAATTGGGACATCCAAGACCTGGTCA
AGAAAGTTGTGAGTGGGTTAAAATCACGTGGTATCCCGGTATGGATGGAC
TTAGATGCCATGAGTGGTGATATCAATTCAAGGCTATGATGCAAACGGCG
ACTACACTTACACCAAAGCCCAACATTACGGCGCCGAAGAGTGGACACTG
AAGGTTGATGAATCTGACAATACAGGAAAGAGGGCTGTCGTTATTTTCGC
CGTTTACGGTAAAAAATATCTCGGAATTAAAAATGGAAAATTATCAGGAT
TCCCAAGTCTAAATCCTGCTTGCAGATGGTATTTGGAATAAGCCAAACAA
AATTTCATCCAGCCAGTGGCAACAGAAACAACTTGGTCTTACGCAATCAA
GCAGAAGCTACAAGTTTCTGGGTGCAAGAACGAAAGGGTGGGAAGGGAGA
AATTATTTTCTTCAAAAATTACAGCACTAATGGATATTTAGGGACGATAG
TCAACTAGAAACCAAAATTGATTCTCTAGCTAAGGAAATAATCTCTCAAA
CCGGAAGTGACTGGATGAAAGGCGTAACAGGCTCCACAGCTAGGCCAGCC
GTTGCGGAATCAAGGCCAAAAGATCTGGAAGATAAAGTGAGCCGGGCTTT
CAAGCATTGCTCAACTGGACAGTTCTTGGCAGAATCGGCATGGCGGAAGG
AGTAGACGGTTGCAAGGCTATCGTTTGTTTCATGACACAAAAATATCAAG
ACAGTAAGAACTGCAAACGAGAATTGACATACGCTGACCAACAAGAAAAA
GATATTATCCCTTGCATGGCTCAAAAAGATTACAAAGCTCAAAGCTGGTT
GGGAATTGTCACTGCTGGACTTTTGTGGATGAACTTCAGATGCCTCCTAA
ACATATTATGATTTCATACAATTGGGACATCCAAGACCTGGTCAAGAAAG
TTGTGAGTGGGTTAAAATCACGTGGTATCCCGGTATGGATGGACTTAGAT
GCCATGAGTGGTGATATCAATTCAAGGCTATGATGCAAACGGCGACTACA
CTTACACCAAAGCCCAACATTACGGCGCCGAAGAGTGGACACTGAAGGTT
GATGAATCTGACAATACAGGAAAGAGGGCTGTCGTTATTTTCGCCGTTTA
CGGTAAAAAATATCTCGGAATTAAAAATGGAAAATTATCAGGATTCCCAA
GTCTAAATCCTGCTTGCAGATGGTATTTGGAATAAGCCAAACAAAATTTC
ATCCAGCCAGTGGCAACAGAAACAACTTGGTCTTACGCAATCAAGCAGAA
GCTACAAGTTTCTGGGTGCAAGAACGAAAGGGTGGGAAGGGAGAAATTAT
TTTCTTCAAAAATTACAGCACTAATGGATATTTAGGGACGATAGTCAACT
AGAAACCAAAATTGATTCTCTAGCTAAGGAAATAATCTCTCAAACCGGAA
GTGACTGGATGAAAGGCGTAACAGGCTCCACAGCTAGGCCAGCCGTTGCG
GAATCAAGGCCAAAAGATCTGGAAGATAAAGTGAGCCGGGCTTTCAAGCA
TTGCTCAACTGGACAGTTCTTGGCAGAATCGGCATGGCGGAAGGAGTAGA
CGGTTGCAAGGCTATCGTTTGTTTCATGACACAAAAATATCAAGACAGTA
AGAACTGCAAACGAGAATTGACATACGCTGACCAACAAGAAAAAGATATT
ATCCCTTGCATGGCTCAAAAAGATTACAAAGCTCAAAGCTGGTTGGGAAT
TGTCACTGCTGGACTTTTGTGGATGAACTTCAGATGCCTCCTAAACATAT
TATGATTTCATACAATTGGGACATCCAAGACCTGGTCAAGAAAGTTGTGA
GTGGGTTAAAATCACGTGGTATCCCGGTATGGATGGACTTAGATGCCATG
AGTGGTGATATCAATTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003943-exon-sc0000038-1575043694:215495..215642 | TCONS_00003943-exon-sc0000038-1575043694:215495..215642 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1575043694:214118..214272 | TCONS_00003943-exon-sc0000038-1575043694:214118..214272 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1575043694:212797..212997 | TCONS_00003943-exon-sc0000038-1575043694:212797..212997 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1575043694:209934..210130 | TCONS_00003943-exon-sc0000038-1575043694:209934..210130 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1575043694:209565..209714 | TCONS_00003943-exon-sc0000038-1575043694:209565..209714 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1575043694:207188..208840 | TCONS_00003943-exon-sc0000038-1575043694:207188..208840 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1510915933:215495..215642 | TCONS_00003943-exon-sc0000038-1510915933:215495..215642 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1510915933:214118..214272 | TCONS_00003943-exon-sc0000038-1510915933:214118..214272 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1510915933:212797..212997 | TCONS_00003943-exon-sc0000038-1510915933:212797..212997 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1510915933:209934..210130 | TCONS_00003943-exon-sc0000038-1510915933:209934..210130 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1510915933:209565..209714 | TCONS_00003943-exon-sc0000038-1510915933:209565..209714 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1510915933:207188..208840 | TCONS_00003943-exon-sc0000038-1510915933:207188..208840 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1491911889:215495..215642 | TCONS_00003943-exon-sc0000038-1491911889:215495..215642 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1491911889:214118..214272 | TCONS_00003943-exon-sc0000038-1491911889:214118..214272 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1491911889:212797..212997 | TCONS_00003943-exon-sc0000038-1491911889:212797..212997 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1491911889:209934..210130 | TCONS_00003943-exon-sc0000038-1491911889:209934..210130 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1491911889:209565..209714 | TCONS_00003943-exon-sc0000038-1491911889:209565..209714 | Clytia hemisphaerica | exon |
| TCONS_00003943-exon-sc0000038-1491911889:207188..208840 | TCONS_00003943-exon-sc0000038-1491911889:207188..208840 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:207188..215642 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000157 | TIR_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007165 |
signal transduction |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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