TCONS_00047029 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047029
Unique NameTCONS_00047029
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2617

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047029 ID=TCONS_00047029|Name=TCONS_00047029|organism=Clytia hemisphaerica|type=transcript|length=2617bp
ctactTTCACTTTCTCAGAACTTGCTGGAGGAATTTATGAACCCTTTTCT
TTTGTCAAACAAGAAGAATGAAGTCTATGAGGTTGATCCAAACAtaaact
tgaaagttagaaaaCAAGTGTATATGCTAAGACGTACTCGAGCAACTGAA
GGTGGATCATTGATTTGTGAATTGTGTGGCCGTTCTTCATATAAACAATA
TTCAATTGAGGTAGAAGTTTCTGCTGATTCAACCACTGGTGGTAAACGAT
CAAACCAATGGAAAAGAGCAAGCACTGAGATAGCTAAGATCTGTCGAAGT
TGTTTTTTCGAGCAGAACAAAGATCAATCATCTAGTAAGACTGGATCCAA
AACTCGGACGCGTCCACAATTTCACCGTTCTGAATGTGGGATCACTACCG
GTCGTGCTTCCAAAGCATGGCATTTTGTACGCCGTGACCTAATCGTAAAC
AAAACTAAAGCTTTACTCAATAAACGATgctttgaaaatgaattttcagA
CCGCTTCTTGAATGAAGAAACTGAAGTTGAGGAATCTTGCGACTCGGACA
CAAGTTATGAGAGTGATTCAGGAAGCATTGACGTTCTTCCTTTTCAATTA
GCCAACACAGGTTGGGTGACACCGGGGTCGTTAGTTCAAGTGAAACGCAC
TGATGCTCGGCAAGTCGTAGCGTCTCCCTCACCTTTGCTAACAGAAGAGA
TTTCAGATGCTTTGTTGCAGACTGAGCTTGCAATGACTCGAGATATTTCT
CCTCAACCAATCAAATCTCCTGAATTAATCAAATCGCCCAGTGATACTTC
GGCAGATGACACGATCCTGAATGCACTCATGGAATCTTTCGAAACACCAT
TGAGCATCGTAACCGTAGCGGAAGACACTGCAAACCCAGTGAAAACTCAA
CTAACAAACACTATAATCGAAGATGGACTATTAGATTATTTTACGGATCG
ACCTGCTCGTGTGCGACGCATCAAACGGAAGCGAAGGCGGACCATATCAA
GAAGCAGTGTTATTaagaagaaagtgaagaaaGATACCTCGAAGCAATCA
ACTTATAACGGACTCTGCAAATTAGTTACCGTTTTGAATCACACGAAAGG
AAAGTATGTTGATAATTCAAAAACATCAACTTTATTTGATACTCATGGTC
TTGATTGGCGCAACAAGGATCTACCGTCTTATCTGAACATCAACACAAAC
CAATACGTAGATTCAAAAGGAGGTTACcgacagaaaaagaaaaatgttga
taCTTTTATGActgatcaaaaatcaaaaccagTCTTAAAGATCAAACGGA
AAGTTAAAGAATTTTCTCCGACACCATCTCCCATCCCTNcccccccccgc
ttattccaacccccggctattaggtaccctaGAGTAAGTCACACACTTGA
ATATTTGAACtgaataatttctttttaaatctctCGAGCAGTTGCAGCAA
CACAGAAGAAATTTGCATCTGTAGCGTACGATTGTGAGATTTGTCAACAA
AACTTAGCAAGAAAATCATACAAAAGTTATTCCAAAGAAACTGCACCACT
TATTTATCTCAAGTTGTTCAAAGGTAACAAAGACAAGCTTCGTATCTGTT
CCAACTGCAACCTGAGAAAAATGAACGAGAAATACAACAACGTACAATCG
CGCAAACGACCTGCTGGACAGAACGAAAAAGAGCCACCTGCCCCAAAAGT
TTCTAAACAAACACCAATACCAGCAAAATCAAGTTCAAGCTCGTCGTCTA
TGAAAGGGCAAACGAAACAAGCCTCCTCACAAGTATTCAAACTCAGTGAC
GCTGGTGCACAAGACATGAATGTTACCATCGTTAAAAGTCCAGATGCAGA
ACAGATGAAAATGATTCAAAACAGTAATGCTAAATACGTCATACTGAAAG
CAACACCGACTGCTAATGGCAACATCGTTACCGGTGATTTAGACCAAATA
TTAAGTGAAATCCGTATCCAAGGAAAGAACTATAAGATTGATAAGGATTT
CAAATTAAACGAACTTGTAAAAGAGAATGAAAACGCTGGCACTGTGACTG
CAAACTCTAAAGATCTTTTAGTGAAACAACTCCCAAACATTCTCAAACGA
ACCATAGGCCAACGCAACGGTGGTCCAACAACCTTTAAAATTGTCAACGT
CATGCCTCCTGCTATGGTTGCTAACAACACGAACGTGCCCAAAGTActtc
caaaaacaacaacacaGCAACACGTCACATCCTCTCTGCCATCTATTTCT
CTACAAGTTCAAGAACAGATCCGAACCTCTCTGGCTAATAGTAAGAAGCC
GAGAACAAATTTAACCGGATTGACCAACTCGCTTCCAACAAACGGACCGG
TCAAACCAATTCAAATGGTTAACCCGCCCAAAGTAACACTACCTGCTTTA
TCCGGTAAGAAACGGCCAATGCCTAATACTAACCAATCTGTTACACAGAT
TCAAAGACAAAAGATTGTTTCCTCAACAAAAACTTCAAGCAAAGGAGatt
ctaaaaaatgaaaaatgtattttgtaAAGTATTTAATTATGATTTTAAAG
AGTATTTTAATGGtcttttattaaaaaaggtttaatatacAGTGTGCCCG
GAAAAAATATCATACTG
Run BLAST on NCBI

protein sequence of TCONS_00047029-protein

>TCONS_00047029-protein ID=TCONS_00047029-protein|Name=TCONS_00047029-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
LLSLSQNLLEEFMNPFLLSNKKNEVYEVDPNINLKVRKQVYMLRRTRATE
GGSLICELCGRSSYKQYSIEVEVSADSTTGGKRSNQWKRASTEIAKICRS
CFFEQNKDQSSSKTGSKTRTRPQFHRSECGITTGRASKAWHFVRRDLIVN
KTKALLNKRCFENEFSDRFLNEETEVEESCDSDTSYESDSGSIDVLPFQL
ANTGWVTPGSLVQVKRTDARQVVASPSPLLTEEISDALLQTELAMTRDIS
PQPIKSPELIKSPSDTSADDTILNALMESFETPLSIVTVAEDTANPVKTQ
LTNTIIEDGLLDYFTDRPARVRRIKRKRRRTISRSSVIKKKVKKDTSKQS
TYNGLCKLVTVLNHTKGKYVDNSKTSTLFDTHGLDWRNKDLPSYLNINTN
QYVDSKGGYRQKKKNVDTFMTDQKSKPVLKIKRKVKEFSPTPSPIPXPPR
LFQPPAIRYPRVSHTLEYLN
Run BLAST on NCBI

transcript from alignment at scaffold_120:201575..211569-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047029 ID=TCONS_00047029|Name=TCONS_00047029|organism=Clytia hemisphaerica|type=transcript|length=9995bp|location=Sequence derived from alignment at scaffold_120:201575..211569- (Clytia hemisphaerica)
CTACTTTCACTTTCTCAGAACTTGCTGGAGGAATTTATGAACCCTTTTCT
TTTGTCAAACAAGAAGAATGAAGTCTATGAGGTTGATCCAAACATAAACT
TGAAAGTTAGAAAACAAGGTATAGTATTGTTTATTTGAATATAATTCGAA
ACTCCACCACTGACTTCAGCATCAAAACAATGATTAGAAATATACATGTG
TTTACCTTTACTTGCTTTATTTTTTGTGTGTTCAGGACCCTGCCGACGCA
CCGGACTGTCCGGTGTATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTTC
ACCGANAATGTCACTTGTTTTCCTGATATTTGGATAATATTAAAACCTTT
CTGTATATATTTGGTTCTTCAAAACCATTTCCCTTTCCCGCAGCAGGCCT
TAAAGTTCATGTTGACCCCCGGTTTTTTTTGCGCGGTAATCTAGAAAGGC
CTTTAGTGCGGTATAAACAAATGATTTCATTGGTTTAAAAAGGTCAAAAC
ATCAAGCTATATCACGTGATCAGAATCATGATCGAACTAAACGGAAGCCG
TGGTCATATGTCATATGATATTTTCCNGTTTAGTAAACTCGACCACGTAT
CAATGTTTTGATTTTTCAAGCGGGGATTTCTGTAGAATGATAAAATATGG
CTTGGCTGGAATGGACACCATAACAGCAGTGTTGGAGGTACTCCGATTTG
TGAAGCGTCTTTATGTCACATAGAACAAAATCACCCATGCGTAAAGTTAA
CAGATCTGAAAATACAACGCTAGATCTTATGGATTTTTGTAGATATCTCT
ACACTTGCACGTGTTTCACTATGGAATTTGTTTCATATTTTGATTTAAAA
GCCTACTCGGTGCAAATGAGAAATTGTGTATTTTTTAATACTCTGTTCAT
TAACTCAAATCAAATGACTTTAGAGGTTCGGTGAAATGGTGGCCGAATTG
CCGTCCCATGTTTTGTCAGATAGTCATGTGATTAATTTTTGAACCAATCC
CAAGAGGAGTATTTGGTAACATGATNAGGGAATTTTGGACGCCGGACATT
TATGAAACAAAAAATTAAGAAACACCGGACGCACCGGACTGGTCATGTCC
GGTGTTTTGATTGTCCGGTGGGAAAAAAAATTTATTTTAGTTTGTATCTT
TGAAAGACCCCATCAGATTTAGGCAGCGCTGTCAGATTTAGGACCACTCA
CGGTATCAACCAGTCCCATGTTTTGACCAATCGTCCCAAGTTAGAGCAGT
GTTGACGGTTGGNGTTAACAGATCTGAAAATACAACGCTAGATCTTATGG
ATTTTTGTAGATATCTCTACACTTGCACGTGTTTCACTATGGAATTTGTT
TCATATTTTGATTTAAAAGCCTACTCAGTGCAAATGAGAAATTGTGTATT
TTTTAATACTCTGTTCATTAACTCAAATCAAATGACTTTAGAGGTTCGGT
GAAATGGTGGCCGAATTGCCGTCCCATGTTTTGTCAGATAGTCATGTGAT
TAATTTTTGAACCAATCCCAAGAGGAGTATTTGGTAACATGATCAAAAAC
TGAGTAAATCAATTTTATAATAGTTATTTTTAACAAAGGAAAAAGTTAAA
AGAATGCTACATCAATAGGCTTCATGACCAGAGTTTTTTATACGGACTAT
GATGTTATGTTAAATAATTAAAGACTCCAGCATCAAACAATACTAAGAAA
AAAAATTTTATACACTTATAGTAATTACACATTAATGTGTCATTGTTTTC
AAACTGGAGTTTTTTATTAAGCAACATGACGTCACTTCTAGCAAAAGGTC
TATCAATTGATTGATTATTCATCGATTCAGATCGATTGGCTCCAAGATTA
TCTATTGATCGCAAAACCTGGAATTGCTTCGCATGCCAAAAAGCAATATA
ATTCAAACCTATTGTTATATTAGGCAAATCTTTAAAAGGTTTGTTTTTCT
GAGCAAACATCACAAATGTAAAATGAAAACTATTGGACATTTGGAAATTG
ATATATTTTACCTTTAGCAAACAGAAAAAATATTAGTTTACAAATAGCTA
TATAAAGATGTTTTAAGTATTTTTACGAGGGACTATAAAAAAATATCCGG
GTAGCGGCTGGGTGATGTTTAAAAAAAACTTTACCTGGCTGATTTCCTGA
AAAAAGACTACTTTTTTTTGTAGTCAAGATAAAGAGAAACAAATCAAGTT
TTTATCAACTTTACAAAATTAAAAGTGGTGCTTGCTGACACTTTTATCAC
TCTAATTAGAATCATAATTTATTTCATAAACAAAATTCCACGGCAACTCG
CTCCAAACACAGATGGGTAGATATACCATTGATATTTAAAGGGGAAGAGT
TATCCTCCCAAGGCCTACTAAGGAAAACCTCTTTATTTCAATCAAAGCCA
TTTCTTTAGTCAATTTGTGTTTTGAGTTTTGTATGACAAAATCAGCAGCA
AACGATATCATATTTGGTGGCAATGGAAAGCTTATGGAATCGCCAATCCT
GCACTGATCTGAACTTTAGTATAATAAGTCTTTTCAAGGTGTACACCAGC
AGGGAATACGAAACTTTGTCTTTTTCATTTTTTCATAGTCATGAAAGTTA
TAGAATCTATAGATGCATTATTATCAGGCTTTCCATGGATTATATAATTG
ATGTAACTATATCTGTGTCCCCATCATGCTAAAGTAAAAAAAACTACCCC
TCGGTAAGAATCTTTTCATATACTTGAAAAAGACAAATAAGCCTAAAAGN
ACTATCCCTTGGTAAGAATCTTTTCATATAGTACTTGAAAAAGACAAATA
AGCCTAAAAAATTGTTGCTCTGACAAAAACGTGTCTTATTTTCATTTTGT
TACACATCTTGTAGCATTTTATGTTTCCACCTTTTTATTTTAGTGTATAT
GCTAAGACGTACTCGAGCAACTGAAGGTGGATCATTGATTTGTGAATTGT
GTGGCCGTTCTTCATATAAACAATATTCAATTGAGGTAGAAGTTTCTGCT
GATTCAACCACTGGTGGTAAACGATCAAACCAATGGAAAAGAGCAAGCAC
TGAGATAGCTAAGGTAAGCCTTTATTTTTATAAGAGTCAGATATTCTTTA
GTACAACTGTTTTTCTCAGTGTTTTCACCATTTTATTTTGCAGTTTTTCT
CGTAAATTTGTCTCGANTGCTAAGACGTACCCGAGCAACTGAAGGTGGAT
CATTGATTTGTGAATTGTGTGGCCGTTCTTCATATAAACAATATTCAATT
GAGGTAGAAGTTTCTGCTGATTCAACCACTGGTGGTAAACGATCAAACCA
ATGGAAAAGAGCAAGCACTGAGATAGCTAAGGTAAGCCTTTATTTTTATA
AGAGTCAGATATTCTTTAGTAGAACTGTTTATCTAAGTGTTTTCACCATT
TTATTTTGCAGTTTTTCTCGTATATTTGTCTCGAATTTTCTTGAACACTT
TGTGTTTTTATTTATTTCATTGTATCTTGCATGCATTTAGTAAATATGCT
TCATTTCTATGTCACTAGAACTGGAAAAACATGAGTATTTTGGATAAAAA
TTAGGGTTGATATTAAATTGTGGAAAACGAGGAACGAGAATATTTCTATG
AATCTCTTTTGTGAAACAATGTATTAAAGATCTGCAAATATCAAGTAGAA
TTAAAAAGGGTACTGTTTAGATTTAGCCATACACACAATTTCTTTTGGCC
CAGAATCGGGCCTTTCATTAGCATGTCTCTGTCAGTGGTGTTGTATGTCT
GCCGTAGAAAAAGCAGTGCTTTGTCAATTCAAGTTTATTTTGGAAGAATC
AGCGCCTTGTAACGACTATTGCTATGTGGCTGGGCCTTCATGCCCCATCA
GCTTCTTGTTTCTTCTTTCGGCTTCTTGTTTCTTCTTATATAAGTGGTCT
GACACGTACTTTTCTCGCAACACGATGTAATATATAGGTTAATCTCTTCT
CGAGCATCTTAACTTTTGTGTTTTGTTGAATGTATTGTTTTGAGCGTTAT
TGTTTTTTTACAGATCTGTCGAAGTTGTTTTTTCGAGCAGAACAAAGATC
AATCATCTAGTAAGACTGGATCCAAAACTCGGACGCGTCCACAATTTCAC
CGTTCTGAATGTGGGATCACTACCGGTCGTGCTTCCAAAGCATGGCATTT
TGTACGCCGTGACCTAATCGTAAACAAAACTAAAGCTTTACTCAATAAAC
GATGCTTTGAAAATGAATTTTCAGACCGCTTCTTGAATGAAGAAACTGAA
GTTGAGGAATCTTGCGACTCGGACACAAGTTATGAGAGTGATTCAGGAAG
CATTGACGTTCTTCCTTTTCAATTAGCCAACACAGGTTGGGTGACACCGG
GGTCGTTAGTTCAAGTGAAACGCACTGATGCTCGGCAAGTCGTAGCGTCT
CCCTCACCTTTGCTAACAGAAGAGATTTCAGATGCTTTGTTGCAGACTGA
GCTTGCAATGACTCGAGATATTTCTCCTCAACCAATCAAATCTCCTGAAT
TAATCAAATCGCCCAGTGATACTTCGGCAGATGACACGATCCTGAATGCA
CTCATGGAATCTTTCGAAACACCATTGAGCATCGTAACCGTAGCGGAAGA
CACTGCAAACCCAGTGAAAACTCAACTAACAAACACTATAATCGAAGATG
GACTATTAGATTATTTTACGGATCGACCTGCTCGTGTGCGACGCATCAAA
CGGAAGCGAAGGCGGACCATATCAAGAAGCAGTGTTATTAAGAAGAAAGT
GAAGAAAGATACCTCGAAGCAATCAACTTATAACGGACTCTGCAAATTAG
TTACCGTTTTGAATCACACGAAAGGAAAGTATGTTGATAATTCAAAAACA
TCAACTTTATTTGATACTCATGGTCTTGATTGGCGCAACAAGGATCTACC
GTCTTATCTGAACATCAACACAAACCAATACGTAGATTCAAAAGGAGGTT
ACCGACAGAAAAAGAAAAATGTTGATACTTTTATGACTGATCAAAAATCA
AAACCAGTCTTAAAGATCAAACGGAAAGTTAAAGAATTTTCTCCGACACC
ATCTCCCATCCCTNCCCCCCCCCGCTTATTCCAACCCCCGGCTATTAGGT
ACCCTAGAGTAAGTCACACACTTGAATATTTGAACTGAATAATTTCTTTT
TAAATCTCTCGAGCAGTTGCAGCAACACAGAAGAAATTTGCATCTGTAGC
GTACGATTGTGAGATTTGTCAACAAAACTTAGCAAGAAAATCATACAAAA
GTTATTCCAAAGAAACTGCACCACTTATTTATCTCAAGGTAAGATACTTT
CTCAACCCTCATCATTTTTATGAGAATCATTTTGCATATTGATATAGTAA
GTTCCCCAGCTAATGGATAATCTACAGGCAGAGCAAACAAATCCTCTTAA
ATACCCTTTTGAAGGTGAAGACACTTTATTCTAAATCATCAAGTCGAACC
TTAATTCCGATGTCCCTTTTGAGACTTACGGTATCTTTATTTATATTTCA
GTTGTTCAAAGGTAACAAAGACAAGCTTCGTATCTGTTCCAACTGCAACC
TGAGAAAAATGAACGAGAAATACAACAACGTACAATCGCGCAAACGACCT
GCTGGACAGAACGAAAAAGAGGTGAGATGCAATCCAATCCTTTAAATTTA
AAATGACTTTCATGATAATACACGTTTTTTTTTTATTAGAACACCTAAAA
TTTGGCTGAGCCTGGATGTGCTTATTTTCTTGGTAGTTTTCAGCCTATAA
TGTTCTTAAATACGCTCTTAACTTTTTAGACTACTCTAAATCGACAATAT
CATGCAAAACAAGACGACTTAAAGTCGAAAATTTCGCATAATACTTGAAC
ATTAACGACGAAGACGCGTGAAACGTGACTCCTGCAGCATTATGCATTTT
GAATGAAGCGTTACAAAAAATATACACAATGTATTGTACACACAGGTCAT
AGATGTCATAGATACCCTGTTTTTTTATGAAAAATCTCAATCCATTAAAA
AAAAGATTCCTTAAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATTTCAAAATCGATCTAAGTCAAGAAAATAGTAGCTTCAATGT
TCTACAGATTTAACTTAGCTTATCAAATCTAAACAGATAAAAAGGACAAT
TTCAGCGTCATTACTATTTGTAAGTTTCATATAAATTGTTTTATAAACTA
CATTATACGATTTCAAAATATATGAACTCCCATACACGCCGTGAAACTAA
AAGAAAAAAGTAAAACCAAAATAATTGTGTCTTGGATTTTAAAATTGTAG
GCATCCTTAGTTTTCTTCTTAGTTTTTGGAAAACCATCCATGGATTTTAT
TTTTAATATTTTTCTAGAAAAGGTAAAAAAGTAGCACTTAGTATTCATTT
GTATTAACTGTTTTCCTAGATTTTTTACTTGACACCACCCTAGCAGTCAC
TTAGTACCATCAAGTACTAACTGATTTTTGAAAATTTTGTAGGTATACCA
CCACGGTACTAACCGGCATGATGTCTTGTACTAACGGCTTGACCCCCCCC
CCTGGACAGAGGGGAATTTATAGGACCTCCACCCCACCGGGGTAGGTCCA
AAAAGGGACATATTTCCAAATGTCTCAGGCGCTCCAACCTTGATATCTGA
AAATGTGCTACCTTGAGAACAAAACATACATTTACCTTTTAGCTAAGAAA
CACAACAAACGCACAAGCAGAAAGGCGTGTTATTCATTAACTAAATATTT
AAGTCTACTCAATATTTTGATGCATATTTTGTTCCTCTTTTTGAGTGCTA
GGTATATGAGCCTGANTTATTACCTTATTGCCCATTCTTTTTACATTCCA
ACGGCTTATTAGCAGACGCCCACGTTAAAACTTAAAGAGCGAGCCAATAT
CTATCATCCCATCGGGGAAGAAAAGCTGTAACTTTTACTAACCAAACTTA
TCGAACACCAATCAAACTTCATTGAATAAAAAACTGTCATCATTAATGAG
GGACCGCTGTATATACATTGTACAGTGGTGTACGGTGGGGCTGGATCTAA
ATGTCCTTTGTACGGNTTATTGGTGCATTCACTAACTACACAAACATAAA
GTACTTAGTAGTAAACAAATATTAAACCTCTTTAAACACTCTACAAAAGA
CCAGAAAATATGATAAAAATTTACAGTATACAGCAGCAGCAAGTTTCAAA
AGCAGTCATTAAACAGTTCTCACGATGAATGTTTGCAAAGGCTTGGTTAC
ACTTCTTACCTTNGTACGGCAGTGTCGTAGGCAGGGTCGTTTCGATTATA
CAAAAATGATTGCTGAATTTCAATTGACATGATTTCTAAGAAATACCGTG
AGATCGGGTAACTTACATAAGCCCTCAAATGAATTACCCATTTGGTCATT
AAAATACGAAGTTAAATCAAAACAAAAATGGTAGGCNTTTTTATCACTTT
TTATCTTTGTGAGTGAGTCCACCTTTAGAATATTTGCCGTAGTACGCCCG
CAGCCAAACGCCCACGCCATAATCTTCGCCCCCAAAAAATTCTCCCCCGC
CGCCGCCGCAGAAAGGCTATCGTAATACTTTCGCTAAGCGAAATTAATAA
AGAGCACTTAAAATTGGTAAAATTTAGACAATATTTGACTCTCGATTTTG
GAAAATCCACCCCTAAGTTCGGTTAAAACTGCTTAAAAAGAGGAAAAATT
GTAGTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGACATGTTCTTACGA
TGTTCTTAATTTTTTGACAAATTTCAGCCTCAATGTTCTTATAAACTAGG
TTCTAATAAAAAAAAAACGTGTACCTCAAAGTCATAATATAATTTCCAAT
CTCCTGCAAATAGTGAACGTTTGACTTAAACTGTAACAATATTTTTATTG
TATCTTTTCAGCCACCTGCCCCAAAAGTTTCTAAACAAACACCAATACCA
GCAAAATCAAGTTCAAGCTCGTCGTCTATGAAAGGGCAAACGAAACAAGC
CTCCTCACAAGTATTCAAACTCAGTGACGCTGGTGCACAAGACATGAATG
TTACCATCGTTAAAAGTCCAGATGCAGAACAGATGAAAATGATTCAAAAC
AGTAATGCTAAATACGTCATACTGAAAGCAACACCGACTGCTAATGGCAA
CATCGTTACCGGTGATTTAGACCAAATATTAAGTGAAATCCGTATCCAAG
GAAAGAACTATAAGATTGATAAGGATTTCAAATTAAACGAACTTGTAAAA
GAGAATGAAAACGCTGGCACTGTGACTGCAAACTCTAAAGATCTTTTAGT
GAAACAACTCCCAAACATTCTCAAACGAACCATAGGCCAACGCAACGGTG
GTCCAACAACCTTTAAAATTGTCAACGTCATGCCTCCTGCTATGGTTGCT
AACAACACGAACGTGCCCAAAGTACTTCCAAAAACAACAACACAGCAACA
CGTCACATCCTCTCTGCCATCTATTTCTCTACAAGTTCAAGAACAGATCC
GAACCTCTCTGGCTAATAGTAAGAAGCCGAGAACAAATTTAACCGGATTG
ACCAACTCGCTTCCAACAAACGGACCGGTCAAACCAATTCAAATGGTTAA
CCCGCCCAAAGTAACACTACCTGCTTTATCCGGTAAGAAACGGCCAATGC
CTAATACTAACCAATCTGTTACACAGATTCAAAGACAAAAGATTGTTTCC
TCAACAAAAACTTCAAGCAAAGGAGATTCTAAAAAATGAAAAATGTATTT
TGTAAAGTATTTAATTATGATTTTAAAGAGTATTTTAATGGTCTTTTATT
AAAAAAGGTTTAATATACAGTGTGCCCGGAAAAAATATCATACTG

Coding sequence (CDS) from alignment at scaffold_120:201575..211569-

>TCONS_00047029 ID=TCONS_00047029|Name=TCONS_00047029|organism=Clytia hemisphaerica|type=CDS|length=5652bp|location=Sequence derived from alignment at scaffold_120:201575..211569- (Clytia hemisphaerica)
ATCTGTCGAAGTTGTTTTTTCGAGCAGAACAAAGATCAATCATCTAGTAA
GACTGGATCCAAAACTCGGACGCGTCCACAATTTCACCGTTCTGAATGTG
GGATCACTACCGGTCGTGCTTCCAAAGCATGGCATTTTGTACGCCGTGAC
CTAATCGTAAACAAAACTAAAGCTTTACTCAATAAACGATGCTTTGAAAA
TGAATTTTCAGACCGCTTCTTGAATGAAGAAACTGAAGTTGAGGAATCTT
GCGACTCGGACACAAGTTATGAGAGTGATTCAGGAAGCATTGACGTTCTT
CCTTTTCAATTAGCCAACACAGGTTGGGTGACACCGGGGTCGTTAGTTCA
AGTGAAACGCACTGATGCTCGGCAAGTCGTAGCGTCTCCCTCACCTTTGC
TAACAGAAGAGATTTCAGATGCTTTGTTGCAGACTGAGCTTGCAATGACT
CGAGATATTTCTCCTCAACCAATCAAATCTCCTGAATTAATCAAATCGCC
CAGTGATACTTCGGCAGATGACACGATCCTGAATGCACTCATGGAATCTT
TCGAAACACCATTGAGCATCGTAACCGTAGCGGAAGACACTGCAAACCCA
GTGAAAACTCAACTAACAAACACTATAATCGAAGATGGACTATTAGATTA
TTTTACGGATCGACCTGCTCGTGTGCGACGCATCAAACGGAAGCGAAGGC
GGACCATATCAAGAAGCAGTGTTATTAAGAAGAAAGTGAAGAAAGATACC
TCGAAGCAATCAACTTATAACGGACTCTGCAAATTAGTTACCGTTTTGAA
TCACACGAAAGGAAAGTATGTTGATAATTCAAAAACATCAACTTTATTTG
ATACTCATGGTCTTGATTGGCGCAACAAGGATCTACCGTCTTATCTGAAC
ATCAACACAAACCAATACGTAGATTCAAAAGGAGGTTACCGACAGAAAAA
GAAAAATGTTGATACTTTTATGACTGATCAAAAATCAAAACCAGTCTTAA
AGATCAAACGGAAAGTTAAAGAATTTTCTCCGACACCATCTCCCATCCCT
NCCCCCCCCCGCTTATTCCAACCCCCGGCTATTAGGTACCCTAGAGTAAG
TCACACACTTGAATATTTGAACTGAGTGGATCATTGATTTGTGAATTGTG
TGGCCGTTCTTCATATAAACAATATTCAATTGAGGTAGAAGTTTCTGCTG
ATTCAACCACTGGTGGTAAACGATCAAACCAATGGAAAAGAGCAAGCACT
GAGATAGCTAAGTGTATATGCTAAGACGTACTCGAGCAACTGAAGCTACT
TTCACTTTCTCAGAACTTGCTGGAGGAATTTATGAACCCTTTTCTTTTGT
CAAACAAGAAGAATGAAGTCTATGAGGTTGATCCAAACATAAACTTGAAA
GTTAGAAAACAAGATCTGTCGAAGTTGTTTTTTCGAGCAGAACAAAGATC
AATCATCTAGTAAGACTGGATCCAAAACTCGGACGCGTCCACAATTTCAC
CGTTCTGAATGTGGGATCACTACCGGTCGTGCTTCCAAAGCATGGCATTT
TGTACGCCGTGACCTAATCGTAAACAAAACTAAAGCTTTACTCAATAAAC
GATGCTTTGAAAATGAATTTTCAGACCGCTTCTTGAATGAAGAAACTGAA
GTTGAGGAATCTTGCGACTCGGACACAAGTTATGAGAGTGATTCAGGAAG
CATTGACGTTCTTCCTTTTCAATTAGCCAACACAGGTTGGGTGACACCGG
GGTCGTTAGTTCAAGTGAAACGCACTGATGCTCGGCAAGTCGTAGCGTCT
CCCTCACCTTTGCTAACAGAAGAGATTTCAGATGCTTTGTTGCAGACTGA
GCTTGCAATGACTCGAGATATTTCTCCTCAACCAATCAAATCTCCTGAAT
TAATCAAATCGCCCAGTGATACTTCGGCAGATGACACGATCCTGAATGCA
CTCATGGAATCTTTCGAAACACCATTGAGCATCGTAACCGTAGCGGAAGA
CACTGCAAACCCAGTGAAAACTCAACTAACAAACACTATAATCGAAGATG
GACTATTAGATTATTTTACGGATCGACCTGCTCGTGTGCGACGCATCAAA
CGGAAGCGAAGGCGGACCATATCAAGAAGCAGTGTTATTAAGAAGAAAGT
GAAGAAAGATACCTCGAAGCAATCAACTTATAACGGACTCTGCAAATTAG
TTACCGTTTTGAATCACACGAAAGGAAAGTATGTTGATAATTCAAAAACA
TCAACTTTATTTGATACTCATGGTCTTGATTGGCGCAACAAGGATCTACC
GTCTTATCTGAACATCAACACAAACCAATACGTAGATTCAAAAGGAGGTT
ACCGACAGAAAAAGAAAAATGTTGATACTTTTATGACTGATCAAAAATCA
AAACCAGTCTTAAAGATCAAACGGAAAGTTAAAGAATTTTCTCCGACACC
ATCTCCCATCCCTNCCCCCCCCCGCTTATTCCAACCCCCGGCTATTAGGT
ACCCTAGAGTAAGTCACACACTTGAATATTTGAACTGAGTGGATCATTGA
TTTGTGAATTGTGTGGCCGTTCTTCATATAAACAATATTCAATTGAGGTA
GAAGTTTCTGCTGATTCAACCACTGGTGGTAAACGATCAAACCAATGGAA
AAGAGCAAGCACTGAGATAGCTAAGTGTATATGCTAAGACGTACTCGAGC
AACTGAAGCTACTTTCACTTTCTCAGAACTTGCTGGAGGAATTTATGAAC
CCTTTTCTTTTGTCAAACAAGAAGAATGAAGTCTATGAGGTTGATCCAAA
CATAAACTTGAAAGTTAGAAAACAAGATCTGTCGAAGTTGTTTTTTCGAG
CAGAACAAAGATCAATCATCTAGTAAGACTGGATCCAAAACTCGGACGCG
TCCACAATTTCACCGTTCTGAATGTGGGATCACTACCGGTCGTGCTTCCA
AAGCATGGCATTTTGTACGCCGTGACCTAATCGTAAACAAAACTAAAGCT
TTACTCAATAAACGATGCTTTGAAAATGAATTTTCAGACCGCTTCTTGAA
TGAAGAAACTGAAGTTGAGGAATCTTGCGACTCGGACACAAGTTATGAGA
GTGATTCAGGAAGCATTGACGTTCTTCCTTTTCAATTAGCCAACACAGGT
TGGGTGACACCGGGGTCGTTAGTTCAAGTGAAACGCACTGATGCTCGGCA
AGTCGTAGCGTCTCCCTCACCTTTGCTAACAGAAGAGATTTCAGATGCTT
TGTTGCAGACTGAGCTTGCAATGACTCGAGATATTTCTCCTCAACCAATC
AAATCTCCTGAATTAATCAAATCGCCCAGTGATACTTCGGCAGATGACAC
GATCCTGAATGCACTCATGGAATCTTTCGAAACACCATTGAGCATCGTAA
CCGTAGCGGAAGACACTGCAAACCCAGTGAAAACTCAACTAACAAACACT
ATAATCGAAGATGGACTATTAGATTATTTTACGGATCGACCTGCTCGTGT
GCGACGCATCAAACGGAAGCGAAGGCGGACCATATCAAGAAGCAGTGTTA
TTAAGAAGAAAGTGAAGAAAGATACCTCGAAGCAATCAACTTATAACGGA
CTCTGCAAATTAGTTACCGTTTTGAATCACACGAAAGGAAAGTATGTTGA
TAATTCAAAAACATCAACTTTATTTGATACTCATGGTCTTGATTGGCGCA
ACAAGGATCTACCGTCTTATCTGAACATCAACACAAACCAATACGTAGAT
TCAAAAGGAGGTTACCGACAGAAAAAGAAAAATGTTGATACTTTTATGAC
TGATCAAAAATCAAAACCAGTCTTAAAGATCAAACGGAAAGTTAAAGAAT
TTTCTCCGACACCATCTCCCATCCCTNCCCCCCCCCGCTTATTCCAACCC
CCGGCTATTAGGTACCCTAGAGTAAGTCACACACTTGAATATTTGAACTG
AGTGGATCATTGATTTGTGAATTGTGTGGCCGTTCTTCATATAAACAATA
TTCAATTGAGGTAGAAGTTTCTGCTGATTCAACCACTGGTGGTAAACGAT
CAAACCAATGGAAAAGAGCAAGCACTGAGATAGCTAAGTGTATATGCTAA
GACGTACTCGAGCAACTGAAGCTACTTTCACTTTCTCAGAACTTGCTGGA
GGAATTTATGAACCCTTTTCTTTTGTCAAACAAGAAGAATGAAGTCTATG
AGGTTGATCCAAACATAAACTTGAAAGTTAGAAAACAAGATCTGTCGAAG
TTGTTTTTTCGAGCAGAACAAAGATCAATCATCTAGTAAGACTGGATCCA
AAACTCGGACGCGTCCACAATTTCACCGTTCTGAATGTGGGATCACTACC
GGTCGTGCTTCCAAAGCATGGCATTTTGTACGCCGTGACCTAATCGTAAA
CAAAACTAAAGCTTTACTCAATAAACGATGCTTTGAAAATGAATTTTCAG
ACCGCTTCTTGAATGAAGAAACTGAAGTTGAGGAATCTTGCGACTCGGAC
ACAAGTTATGAGAGTGATTCAGGAAGCATTGACGTTCTTCCTTTTCAATT
AGCCAACACAGGTTGGGTGACACCGGGGTCGTTAGTTCAAGTGAAACGCA
CTGATGCTCGGCAAGTCGTAGCGTCTCCCTCACCTTTGCTAACAGAAGAG
ATTTCAGATGCTTTGTTGCAGACTGAGCTTGCAATGACTCGAGATATTTC
TCCTCAACCAATCAAATCTCCTGAATTAATCAAATCGCCCAGTGATACTT
CGGCAGATGACACGATCCTGAATGCACTCATGGAATCTTTCGAAACACCA
TTGAGCATCGTAACCGTAGCGGAAGACACTGCAAACCCAGTGAAAACTCA
ACTAACAAACACTATAATCGAAGATGGACTATTAGATTATTTTACGGATC
GACCTGCTCGTGTGCGACGCATCAAACGGAAGCGAAGGCGGACCATATCA
AGAAGCAGTGTTATTAAGAAGAAAGTGAAGAAAGATACCTCGAAGCAATC
AACTTATAACGGACTCTGCAAATTAGTTACCGTTTTGAATCACACGAAAG
GAAAGTATGTTGATAATTCAAAAACATCAACTTTATTTGATACTCATGGT
CTTGATTGGCGCAACAAGGATCTACCGTCTTATCTGAACATCAACACAAA
CCAATACGTAGATTCAAAAGGAGGTTACCGACAGAAAAAGAAAAATGTTG
ATACTTTTATGACTGATCAAAAATCAAAACCAGTCTTAAAGATCAAACGG
AAAGTTAAAGAATTTTCTCCGACACCATCTCCCATCCCTNCCCCCCCCCG
CTTATTCCAACCCCCGGCTATTAGGTACCCTAGAGTAAGTCACACACTTG
AATATTTGAACTGAGTGGATCATTGATTTGTGAATTGTGTGGCCGTTCTT
CATATAAACAATATTCAATTGAGGTAGAAGTTTCTGCTGATTCAACCACT
GGTGGTAAACGATCAAACCAATGGAAAAGAGCAAGCACTGAGATAGCTAA
GTGTATATGCTAAGACGTACTCGAGCAACTGAAGCTACTTTCACTTTCTC
AGAACTTGCTGGAGGAATTTATGAACCCTTTTCTTTTGTCAAACAAGAAG
AATGAAGTCTATGAGGTTGATCCAAACATAAACTTGAAAGTTAGAAAACA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030002XLOC_030002Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047029-exon-scaffold_120-1575043694:211452..211569TCONS_00047029-exon-scaffold_120-1575043694:211452..211569Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1575043694:208644..208676TCONS_00047029-exon-scaffold_120-1575043694:208644..208676Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1575043694:208239..208375TCONS_00047029-exon-scaffold_120-1575043694:208239..208375Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1575043694:206282..207556TCONS_00047029-exon-scaffold_120-1575043694:206282..207556Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1575043694:205949..206068TCONS_00047029-exon-scaffold_120-1575043694:205949..206068Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1575043694:201575..202508TCONS_00047029-exon-scaffold_120-1575043694:201575..202508Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1510915933:211452..211569TCONS_00047029-exon-scaffold_120-1510915933:211452..211569Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1510915933:208644..208676TCONS_00047029-exon-scaffold_120-1510915933:208644..208676Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1510915933:208239..208375TCONS_00047029-exon-scaffold_120-1510915933:208239..208375Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1510915933:206282..207556TCONS_00047029-exon-scaffold_120-1510915933:206282..207556Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1510915933:205949..206068TCONS_00047029-exon-scaffold_120-1510915933:205949..206068Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1510915933:201575..202508TCONS_00047029-exon-scaffold_120-1510915933:201575..202508Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1491911889:211452..211569TCONS_00047029-exon-scaffold_120-1491911889:211452..211569Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1491911889:208644..208676TCONS_00047029-exon-scaffold_120-1491911889:208644..208676Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1491911889:208239..208375TCONS_00047029-exon-scaffold_120-1491911889:208239..208375Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1491911889:206282..207556TCONS_00047029-exon-scaffold_120-1491911889:206282..207556Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1491911889:205949..206068TCONS_00047029-exon-scaffold_120-1491911889:205949..206068Clytia hemisphaericaexon
TCONS_00047029-exon-scaffold_120-1491911889:201575..202508TCONS_00047029-exon-scaffold_120-1491911889:201575..202508Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047029-proteinTCONS_00047029-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_120supercontigscaffold_120:201575..211569 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.281272	0.338788	0.545729	0.554852	6.55475e-08	8.60735e-08	0.818179	0.654127	1.4371	2.07568	1.08682	0.934767	1.63755	1.03799	1.1051	1.27506	0.043306	0.969159	0.343007	1.33043	0.00488868	2.22977	1.57646	2.34026	1.70162	2.4167	0.554391	0.488828	1.44375	2.4015
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047029 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top