TCONS_00047068 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00047068
Unique Name	TCONS_00047068
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2580

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_120:362337..376842-
coding sequence from alignment at scaffold_120:362337..376842-

transcript sequence

>TCONS_00047068 ID=TCONS_00047068|Name=TCONS_00047068|organism=Clytia hemisphaerica|type=transcript|length=2580bp
CATTTTTGTGTGTTCTAACGTATAATACGGCTGGCAATATTGGATCTTTT
TACTCTTTCAAAATGGATCAGATTTTATTTCTATTGGGTGACAGTGAAAT
GAAATCATTGTTATCAACACGTAGAAACAGTCCAACGCCTTCACGTAAAG
TTTCAACGCCAGGGCGTGATTATCAATCACCTACCACCTCCAATCATAAA
CGACATAAAAGCGTTCCCAACACTGCTGGCGTGACGCCTGTGTGGTATGC
GTCAGTTGTTGACGAGTTAAAAAGAAGGGAAGAAGAAAATAAGATACATA
CGATAGATGAACAAAAGGCGGGTTGTGAGAAGatgGGTACAGAATGGAAA
CTAGATAGTCAATTACGTGCCAGTTTGGAGCGCATCGAAAAAATCGTCTT
CAAGCTACAAGACAGTGAAAATGGAGTTCCCATCACCAACGCTAAAGCTT
TGTTTCACACCATACCTAACGTCTGTACTGGCGCTGATATCGTCACTTGG
CTTAAGAATGACCTTGAGTTGAAAACACGTGCCGAGGCTTTGAATGTCGC
TCGTACTATTGCCAAATATGGTTACATCTTTGTAGCCAGTGACAGTAAAC
TTACCGTCAAAGATGATTTAACACACCACCGATTTCAACACGAGTTTTTC
TGGCCAACTAAAGAAAGAGCTATATCGAATTCTGATTATGCTGTCCATCT
ATGTAAACGTCTGTTTTCCAATAAAAATCGATCAAACCTTGAAGTTTACG
AGATGGATCAATTCACACGCTTGCAACGTCATTTAGGTCATAAATGGGAA
CACATTTGGGTACAAGCTGAAGCAAGTTATAAAGTTGATAAGAAAAAGTC
TAAAGCCGAGCAATACGTCATTGAAAGCCAAGAAAGAGCTTTTTGGAATT
TACACAAACCGCCACCCTATTCTGATTATGTTTTAGCTGCTGATCCtttg
aagtttaaaaagaaTGCAACAACCGAGGCTATTACTCCGCTTTCTCCCGA
TCGCGCCGCCTCAACGCCTTCCATTTTGAGGCGCCATTCAGTTGATTCTT
TAAGAGATGACGCCATGAAGCTTGGAACCGCCCTTCAAAAAGCAGAAGCA
CCAAAAGCTGTTGAAAGTTTGATATCTTATTGTATGCAGTACAATAAATT
CGACCCTTTACTCCGACAACCGAGTACTACCTCGAGTAACTCGGCTTTTT
ACACGGAAGAGTCGAACAACTCGAATGATGCTTCCAGACGTGGATCACAA
CAGGTGGAACGCTGGGCGATATCATTGGAGGAGCTATTACGTGATAAGGA
AGGGGTACTCgtctttttaaaacatttagaaaaagaaCACAGCTCTGAGA
ATTTACGTTTTTGGTTAGCTTGTGAAGAATACAAGGCGTGCCCTTTAAAG
AAAGTTCCTGAAAAAGCTgaacaaatttataaagaatATCTATCTCGTTC
TGCATTTTATCAAGTGAATTTAGACAGTAAACTTATGGTTGATGTCGAAG
AGGGTATGAAAAACCCGAACCATTTTACCTTTCGGGCTGCCCAACATGAA
ATCTTTCGTCTCATGCGATCAGACAGCTATCCGCGTTTCTTGAAATCCGA
AAATTTTGTCATGTTATCGAAAGAAGCGAATTCACCGAGTCATAAAGGAC
AAGAGAAGAAAGGAATTTTATCCATTTTGACGAGTCCTCAACATAAAGTA
TAGATGTGGGttatttgtgtgttttttttttgtcaaactcGTTCATTTTT
GTTTGTCTATCTTCGTATGGAAATCTGCTGGTGATTTTTTATATAGTGTA
TGACGTATTTTGTGTTAGATTATTTTTTAGAGATAATATACTTGCTATGA
TTTTTATTACAATCGGTTGTATCTACCATTTAATTGATTTCTCTTTCAAA
TTATACCTCAACCTATTTGACAGCTTTTTATAACTGGCCATGGTCGCGAG
TTTTCCGATATACCTGTTTTGAACCATAATTCGTTTTGTGCAGTTCCGTT
TTAGGAAAAATAAGTCTTTGTTTAGCATAATTTTCCATCCCCCCTTATTC
CTCCTTCAAGCCTTGGTTCCTTTCCCCGGCCAGCTAAGTgaatacttttt
gacttttcgacGATCGTGTAATTGAGGATAAAATCAAACCTCATGTTGTA
TAGATTAGCTTTATCTAGTACATTTATTGCTGACAAAATTTTTATCGCGT
tcattttttgtacataattatTTGTAGCTCTTAGACAATACTTTCCTTTC
TTCGCTGCAAAGATTCATGAAGCGTCCCTTTCAACCAATAACGAAAATTG
GTTATTTGGGAAAACGAACACtttggtttaactcactaaagaATTTTGTT
TACTGAGCACACAAGATTAATCTTTCGTAAGTTAAACCATGATGCTCTGT
TTTTACCCAATtctgacgtcatgccgtggcaaaaaatctttgaaacaaGT
AGCAGAATTTTTTGACATCTTTTCTGTcgataaatttttaaaactcgTTG
TCCTTTGAACAGATTAAACTTCAAGGTCTTTTAAATCACGTCTTTTTCTT
AGctaagaaaataattttacctCAAGTAac

Run BLAST on NCBI

protein sequence of TCONS_00047068-protein

>TCONS_00047068-protein ID=TCONS_00047068-protein|Name=TCONS_00047068-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
FLCVLTYNTAGNIGSFYSFKMDQILFLLGDSEMKSLLSTRRNSPTPSRKV
STPGRDYQSPTTSNHKRHKSVPNTAGVTPVWYASVVDELKRREEENKIHT
IDEQKAGCEKMGTEWKLDSQLRASLERIEKIVFKLQDSENGVPITNAKAL
FHTIPNVCTGADIVTWLKNDLELKTRAEALNVARTIAKYGYIFVASDSKL
TVKDDLTHHRFQHEFFWPTKERAISNSDYAVHLCKRLFSNKNRSNLEVYE
MDQFTRLQRHLGHKWEHIWVQAEASYKVDKKKSKAEQYVIESQERAFWNL
HKPPPYSDYVLAADPLKFKKNATTEAITPLSPDRAASTPSILRRHSVDSL
RDDAMKLGTALQKAEAPKAVESLISYCMQYNKFDPLLRQPSTTSSNSAFY
TEESNNSNDASRRGSQQVERWAISLEELLRDKEGVLVFLKHLEKEHSSEN
LRFWLACEEYKACPLKKVPEKAEQIYKEYLSRSAFYQVNLDSKLMVDVEE
GMKNPNHFTFRAAQHEIFRLMRSDSYPRFLKSENFVMLSKEANSPSHKGQ
EKKGILSILTSPQHKV

Run BLAST on NCBI

transcript from alignment at scaffold_120:362337..376842-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00047068 ID=TCONS_00047068|Name=TCONS_00047068|organism=Clytia hemisphaerica|type=transcript|length=14506bp|location=Sequence derived from alignment at scaffold_120:362337..376842- (Clytia hemisphaerica)
CATTTTTGTGTGTTCTAACGTATAATACGGCTGGCAATATTGGATCTTTT
TACTCTTTCAAAATGGATCAGATTTTATTTCTATTGGGTGACAGTGAAAT
GAAATCATTGTTATCAACACGTAGAAACAGTCCAACGCCTTCACGTAAAG
TTTCAACGCCAGGGCGTGATTATCAATCACCTACCACCTCCAATCATAAA
CGACATAAAAGCGTTCCCAACACTGCTGGCGTGACGCCTGTGTGGTATGC
GTCAGTTGTTGACGAGTTAAAAAGAAGGGAAGAAGAAAATAAGATACATA
CGATAGATGAACAAAAGGCGGGTTGTGAGAAGGTACTTGTTGTAGTTTTA
CTTTATTTTCTTATAAGAATTCTTTTTACAAGAATCACAAGGTTCAAATT
TGCAACATGCTAAGAATCATTCAAGAACAACGCTGAGCCTTATTTTTATC
CACAATTTTCTTCAGATAGAGTTTTACGTTTTTTTGCTTTTTTATCTACA
GTCTAAAATCAGGCGAATAGCCTAACTCTTCAGCAGCCATAGCTGCCATA
AGTGCTCTTTTTATGCGCTCTTTTTCCATTGTGATGCACCCTTTTTTATT
CGCTCTTACTTTCGGTTCGATCATTCGCTCTTTCGGTTCACTCCGGGTAA
CTTAATGGATGTCCCAGAATTGCATTGATTTTTCCACCCTAGTTCCAGTC
CCTAAACCATAACAAGCTATACATTTTTGGAAGCGTATTTGGATGTAGAA
TACCGTATTACTATTAGATGTAACATAAATTTTTTCTCAGTATGATTAAA
GATATCTTAAGAAGAACCTGATTATGATGTCATGATCGATGACATCATAA
ATACAAAAAGTTGAATATCTCGAGAAATATAAATCAAAACATTATGAAAT
TTGGATCAATGATAGAACTCATCTCTTATGGAGATGTTTTGATAAACCAT
AGACCTGTAAATAGTGCGTATAGAAACATTCAGCATGTAGCATGCAGCTA
TTTCTTCAAACAAACAACCATCTTCCAGAAAGTTTTCAAGCACTTGCTTA
GGAATTCTAAATTTCGGTGCACCAAAGTCAAAGTTTGTCAAAGCTTTACC
TGAACTTTCACCACCAAACGAACAACATTTAATTCTCAATCTCATGATAG
TAGAATCATCTGTAAGTCTAATTGACTTGAAATCTTCTTTTGATAACATT
GAAATTAAATCAGATGTTATGTTTTCATCTTTGAAATTTTGAACGTAATT
ATGTAGGCCTAATACTTTCAGAATAGCATGCAACTTTTGGTTAGCCTGAT
AATTTGCCGAGCAGAGAGCGCATGTAAAGAGTGAATAAAAGAGCGCATCA
ACGAATGAAAAGAGCGAATTAAAAGAATGAATGAGCGAATAAAAGAAGAG
CAAAATAAAAGAGCTCATAAAAAGCACACAAGCGAACGAAAAGAGCGAAT
GAGCGAAACGAAAAAGGGAAAGAGCGAAACGAAAGAAAGTCCGCCTAGTT
CTTTTGCATAGGTATGCTTGGATGGGGCAATTTATAATACTTTCTTGACA
TGACAAGCCTTTGGTTTCTACGCGAATAGAGAAGACAAATGCAATTTTCG
ACGCATGATTTAGTCATACGATATTTTTGTGCGATATTGCGACGAGAGCA
AAAGATTAGGTTGATGAGCGAGGGGTTCCGCTTATCAATAGAAGGTAACT
CATCAGAGAAGAGGGTGACCAAATCCAAGTTTTAAGCGAAGTTTTAAGTT
TGAGATTTATTAAGGATAAAACCATTGTAAATTGAATGGGGGAAGGAAGG
AGACACAATGAAGTGGTCATCTTACCATTTGTAACTCATACAGTTAAACT
GTGATGTGAACGAAAAAGTTGAAAAGAAACTTCTACAGGTGTTGGTAGTT
CGACGTTTTATTATTTGACACGCTCCTATTCGTATTCGATAATATTGAAT
CTCACCGTCAACGAGAAACTCTCATAAATGACACTCTATATTATACATTG
CAGCTACCCCCAAGCAAACCTTATTTATTTGATTATATGCACCATCGCAA
TGTCTTTTCCGGCATTACTACGGACGGGCTACGGACCCAATAGCTGATTG
GTTGTAAGTAACGTATTGACTGATTTACGTCACACACTTTCAACCAATCA
GCTGTTGGGTCCGTGGAAGACATAATTGCAATGGTGCATATGGGGGCGCA
TAGTGCATATCATGAATTGAGATCTGGGAATCCTGATGATCCAAACCCTG
GATGATCAGACTACAATGTAACGAACAGATCATTCCGCCCGCCGCATGCG
CCCTTAAATTGCATGCCTGGAATGTGTGAAGAAACCAAGACCTGCTTGGA
AGTTAAACTCGCTGTTCATGACAGTCGGGTTTTTCTGAAATATATGGTTA
GTCTTCCTGGTCGGTAATTATTACAGATAGGCCCAGCTGTCGACTAAGAG
AAAGTGAAGGAAGGACTGCTGACCGAAGGAAGACAGTCAGAGCCAGTGGG
TTGGCAAACGATATCATCCACCAGGATGCATCCTCTCTTATTTTCCCCCT
ATTTTCTACTTTCCTATCTTCTATCCTGATTTTCTGACTTTCTCTAGTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAGAAGAGGAGTCAGAAGTAACCAGGAG
GGTGGATCATTTAGGAGGTGTCAAAGGCCTATTCCAAAAATATTCATACA
GGGGTATTGGCAAATTTTTTTCTTTACTCCTCGAAATTTTCAATGAAAAT
GGTGGGGGGGGGGACATTTCGCTGAACGCGACAAGCTATTTTCCCTTTTT
CTATCTATCTTTCACTTTACATTTTTTCTTTTGGCTTTCTGAGACTCAGT
CAGTTAGTGGAAGTACTTCGGTCTGTGAAGCGTCTTTACGTCACCACATA
GAACAAAAGAAAATAGCAAAAGAACAAACAAAGGAATATTATATACCCAT
AGCAGCAGCCACAAATGGTTAACCTGAGATCAGATTGTGGTTATTTTCTG
CCCACCACGCTGAAGCTCTAAAGAGATGGGTGAAAACAGACAATCTGACG
AATATGCAATCTCGAAATCGTAAGGATCGCGTTCGTCTAAAAGGACTGGA
GATGGCAACAAAGTTGCGTGATTGTGTTTAGGGGACCCGTCCATATTCAT
TTGACAACGCAAAACGTCAAATTGACGTTATCCTCTGAACCCCCCACCCC
CCACAGATAACGTCAAGCAATGTACTGATGTATACCAAAAGTTGTAGCCA
TTTTTCATCAAAGTTTTCCCGTTCCGTCACAAAGTTTGTACTTGGTTGTA
CCCGTGCGTTTATGTGTTCTTTTAACTAATGACTTTTATTTTAAAAAGAA
ATTAAAAGCTTCACTTGGCGCTAGGTCCGTTCCGTGCTTTAGGCGTACCA
CCTTCTTTGCCAACTTGTGCGATGTGGTTCGCTCAACTGCGCAAACAATG
AAAATATGATGTAATGATATCATAGCGCGAACCAATGGGNCTGATCATCT
TTTTTATCTGCCATATATAAAAAAAGTGTTTAATACAAAATTCCTTTTAT
AAAAAGACACATTCTCCTACGAAGAGGCTTCAAAAAAATGACGTTGCAAA
AAGTTGTTAAAAAATATGTCATTTTATCTTAACAATCTCGTAAAATACGT
CACAACCACGGAGCGCTGACTTTAAGTTTTATGACTTGCTCTCCCTTGTT
TGGTCTCCGTAATAAAAAGAAAGTCGTTATTGTGAACTTTGAACATGCTT
AAAATCGAGGTACTTCCACTAACTGTCAGTTTCTCATTTCTGACTGAGAT
TTCATACCTGTCAATCACTTGTCAATCAATTTCACCCAAACTTATTATGG
CACCGAGTGGGATTCAAACGAAAGCCAAAGAAAGACCATCGTATTTGGAA
ACCAGCGCTTTCTCCGCTTTGGGCATTCCAGAATTTGGGGGGTAACAAAA
TTTTTCTGGGATGGCCCATTAGTTTCAATCAGCAATTATGACCTTCTAAT
TATTCCTACCACTAAAAAAAAGGATGTTGAAATGGGCCATTTCAGAAAAA
TCAGAAATAAGAAAAAAAACTTAAAAAAAAAGAAATTATCAGAACATAAT
TCCATGAATTTTACTTAGTTTTTTCATAAGTTGCCAAGTCTATTAAACTA
TTGAATGTGGGACAAGGAGCGAGTGCAATATTGAATTTGAGGTTTCTAGG
AGGGCAGAACCCCCTAAGAAAATGTTTCAAAGTTGATTTGATGGGAAAAT
TATTATGTTTATGTTTCTTTTCTTTAAAGTTGATGTAAACTATCGTAAGC
AGGTAAGTTGGTCTAATGCTGAAATCCCTCTTCCAATTTGGACACCTTTC
TTTAGAGATAGGAATAATAGGAAGGTCGGAATTGCTGATATAGAAACTAT
TTTCCCTTGCTTAGATATCAGATTGGAAAAAATCTTTTGTCTATCAGTGA
TCCTAACCTTCTGATCATTCCTATTTTTAATGAAGGGTGTCGAAATTTTT
AAAGAGGGATGTCGACATTAGACCTACTTATGGTAGTACAAATTTTACTT
AGCTAAAGGTTAATCAATATCAACCATTAAATTACAATCTATCTATAAAG
TTGATATAAGATCAACTGGATTCACAAACTTGCTAAGGCAGGGCGATAAT
GTAGTCCTTCGTTTCTGGTTGCTTTATCAATACAAGTTGAAGGGCTGTCC
TGGGACTTCCCTTCATTCGCCAGATGAAATGTTTGTTTTCTTTGCTCATC
TCTTCATTTCGTTTCTNTCTTGACCGCCAGTTCGCCCGCATGCATTTTTA
ACACCCGTTGCGACGCAAACAGAGCATTTTTTCGATGACCGCCTTAGTGA
GAGTAAGTGAAATAATAAACTTCTTTCTTCTTTTTGACTCAGACTACTCT
AACAGAAAACTTCCTTTCATGAAGAACAATTTTCATAACAGTGCTTGGAA
ATAATCTACAATATATATATGTAAACCCCCCTTCTTAAACTATCCCCCCT
TCCTTGCTATCCCCCCCTTTTTCATAAAAATTTCTGATCCCCTCTTCTTC
ATCTTTTCGAGATGTGTCATCCCCCCCTTAAGAAAGCTGAGGAACGAACT
ATGTTCACATAAGTCTGTTTAAGCTTCTTCTGATTTTGTTGTAAACTCTT
CTTTGATAATTTCTTGTGTTCTGGTTTTCATATATTCCATCTTCTTAGTT
AAAAGGACTAAGTCGTTCTTAATGATGTTTTTTGCATTTGTTTTAATACT
AAGTTCTTGCTGAAGTTTTTGGATTGTTGTCTCTTTCTTTTTTCCAGCTT
TAATATGTTCATTAATCCTCTTGGTCAGAGACTTAGAAACCCCCATGCAG
TTGATACATTTGAATGAATTTACATAATGTGCAAGGGGGGTTCCAGGTCC
CACCTAACAATTCAGGACCCACCTAACCCTAAAATTCCCACCCTCAATCC
AGACCCCCAGATCCCAGCTAAAAATAGTATCCCCACGAAAAATTATACTA
ATTCGAGGAACGAAACAAAAATTCTTACAGTATAATGAACTTGTATACTG
TATAATAAAATAATAATAAAAAGGAGCAAGGTTTATTTAGTATAGTAAAA
GAATTATTTATAGAATATAAAATTTAGAAATTAGATTATAATCAAAACAC
CAAAAATCCCACATAAAGAAATTAATCCCCATCTTAACCAGCCTTAACTT
GTTTCCCCCATCTAAAACCTGAAAATTTCCAAATCCCACTTGGAAATTTT
TGACCCAAAACACCAACCCCCTCCCCACTAATCTGCACACTATGAATTTA
CTGAGCTAGATGTTAAGCAATGTATTTCATAGACAGGAAGATCAGAGCAT
TCGAAATGGACTTCTTTTACATAAAGCGCATAATAATTGACTCTCGTCGT
CACTATTCATCGCACATCTTGATGAAGAGNAGCATAATAATTGACTCTCG
TTGTCACTATTCATCGCACATCTTGATGAAGAGGGTTTTATTACTTGGTG
ATGTTGTGTCCATTTTGATGATTTTATGGTGATTTTTGAGTTTTTATTTG
ACATTTTTCTGCCATTTTAATTTTTCGTTGCAAGAGAGATGAATGATCAC
CAGCTTTGCAATAAACCTTTAGAAGCCATGGTCTATTGAATAAGTAACAA
ACAAAAACGGGACCATTCAAAAAGTATCTCTATGCGCTCTGAAGGGGAAG
GGGTCCTTTGAAATGCATATAAGCGTATTGTGAGGAGGAGGGGTTCAACC
AATACCAACCAATGTTTGCAAATTTTTCTAATGTTTTTTCCAGTCTTTTT
CCAATCTTCTATCTTTCCTTAACTTTGATCTTGTCTTGAAAGAATGTCAT
TAAAATTGAACTGCTTCAGTCAATTTCTGCTAGAATTTTATGATTTTCCA
TAGAGGCAGGGTTGGGGAGGGGGTTTTCAAGGTCCCGTAGACACCCTGGT
TAAGGAATGGCAAAACTTTAGTCTGGTAGGCCACTTACAATATCTTGATG
CAATGTTTTCATTTGATTATAATTCATTATCTTTTTATAAAGAAATTTTT
GCAAACACACAAATTTCGAAAAATGCACTTAATCAGAATTTAGCATCCAG
TTCAGTTCGTAAAAAATTAGGTAACCTCTAGCATAGTCACCTTCAATCAC
CTATCCCTGGCCAAAGACTACTTATAGGTACCAGATACCCCGAGACCTTT
TAGCACCTCCCCTACGGCCAGGGGGTTGAAACTATGTAAGACCTTTTGCT
AATCATAATCAAATGATGAAAAATTCAAAATTCCAGCATCAAAACTTCAA
ACAAAACAATCAAAACAAATCTTTTTTGCTATACTGTTGGGAAGAGAGCC
TTCTCATAAGGTGATGAAATTTTGGTTTAAAAATGTCATCTCTGTTGTCT
TTTGATATGATACAGAGAATACTGAAAATCATTTTGCTTAAGATAGTTAC
TTTCTCATGATTTCTGAACCAATCAAAATATCAAAATGAGTTTTGTGCTA
GCTCTCTGGGGTAAAAGTTCAGAATTTTAAAATTAAGCATTATGTTTATA
AAGCTGACATTTTTGAGAGAATGCCCAAAAAGGGGAACATACACCTTTCT
GCCGCTTTTACATGGTGTTAGCATGATGCCCCCCCCCCAATAGTGGCTTT
TTAAATGTTTTCTATAAAGTCACTGGAAAGTGCATCTAAAGCATAAATCA
TAATCATAATTCTTTTTGGAATGAAGTAAATGATAATATGATCTGTCAAA
GTTACCAATTTTGTTAGAAATAAAACAGAAGATAGGGTTCCTTGGTTGGT
ATAATATCTTTTAGGGATATCATTATGTTAGACAGTAAAGTTTGAGTTTC
CTCCATGCTTTTTCATTTTCATATTCTAAATTTAATGAAAAAAAGTTTCA
ATCACCTCTGTTGCGATGAGACTTAGGCCTTTCAAAACTCTAAATATTTA
ATATTTTTACATTAATATAGAAAAGTGTCTCTTTTGACTGCAAGGAGAAA
TATTGCAAGCCTTTCTTTGGAAAGCAAAAAGTATGCAAACAAACTATTCT
GTCAGAAAAGAGCAATTTGCCATTACCATAGAGTCACCAATGACTATCGA
AGATCAATATTGACACTATGATTTCATTATCATTTACTTTAATATCAACT
ACTTTTTGGGAACGACCATTCATTATACTCGATGTCTTTGAAACTTGCAC
TAAGTTTTTCAAAATTTTGGCTTAATTTTTGTGAACCTTGAAATATTGGA
AAATCTTTATCAAAATGGTAGGTTTTGTTAAATTTTTAGTTTTGATCTCC
CTTTATATTTTAACCAATTATTTTCCAAAGAGTCTTCAGTTTAATCTCCA
AACATTTCGAGTTTCAATTTCTATGCTAGAAAGCCAGAAATCTTTAACCA
AACCAAATTACTAAAACCGAAATATACTAAACTTTTGGTACACAAGAATG
TCAGTGAAATTCATTTCTGTGCCACTCTATAGAACAAACCACAACACTTA
CCACTTCCTTGCATTTTATATAAAAACAATATGTATGTTTTACATTCTCT
TGTAACATAAAATGTTTTGAATTGGAGCTGATATAGACTTTTTAATGTTA
ACGTTTTATCAATTATGTTGATGGGATTTTCAACATAAACTATTTAAATT
GTTTTTATATGTCACCCCACAGTGATGCTATTTTTGATAATAGCAAGTTT
ATTACATAGGGATTTTTTTGTTTTGAAAAATCAGTGCATACGTTTAATAA
GTGCATGAGTTTAATATACTTAAATGTTTGTTTGTTTCACCCACAACAAT
TTAAATTGTCCAGAATATTGTTATCGAATCTGAATTTTGTATGGAACAAA
GATTTTCTCAGAAGTCATGTTTTCTCGAAGATCTTACAAAAAGAACAGCA
AAATGGTATTACAATTATTTCATTATCTCTTTTCAAGTCAGTTTAAAAGA
TACCTATTTTGTTATTATGCATTGAAAATTGACTTTTAAATTGAATTTGG
TATAGCTCTGCATAGCCTCTTCATGATAGATAACTAGACATATTTAAATG
TATTATCGAGCTGAAATTCAGGTTGAATTGTTTGTTTGAAAGAGTACTTC
AGGTACTATATTTCTTGTTCAATTTTCTTTGTTTGTAGTGTCACTTATTA
ATAAATTGGTAATTTGAAATGCCTTAAACGCTTCTTTAAATACACATTAC
TACTTTAAAGCTGTTTTACATTCAACCATATTTACATTCAACCATTATTA
CATAAAACCATATTTAGGAATAATCTTTAGGACAGCAACAAGGAAGTCCT
TTTTCTTTTAACATCTGTATTGGAAGCTGTTTAGCTGTTCAAATAGAAAA
TAACGTACTGGACAATTTTGACACTAGCTGTATATACAATCAATTTTTTT
TCCTGGATTGAATGATATTATCTTATCAAACTAATACTTTTTCAACAGTT
TAAAAACGTTTTAGGAGAAAAGGTTTTCTAAATTTCATTCTTTATTCCCT
TTGAGTTTAAAAAACGCTTTGGAAGTGGAGGTTTTCTAAATTATTTTCTC
GATTTACTTTAGGGGTTAGTTTATTTTATAGCTAGGATAAGGGAAGTATA
TTGAGGAAGTTCTGAACTTGGGATTCATTGTTCCGAGAATCAGTTGAAAG
TTTTTGATATCTTATATTGCAAAATGTATTGTTTTGGGGTAAAATTCGAA
AAAGAGGAACTTTAAAGGCTACTATATATTATATACAAAGATTTATAGAT
TTATGAAAGATGAGAATTATCAATGAAATATATATAATTCTTTGTTCAAA
TTAATTATCAAATCCATGCTTGTTTATTAAAGCTTTTTGAAGATCACTGT
TAATTAATTTTCGTGAGTTTTGCTAAAAGAGCAATATTTTTTTTCGTGAT
TTGCTTTTTTGTTGTTGGCTCTAAAAGAAGTAAAATTTTTTGGTCAGTAT
ATAAATAAGGCTAGGTTGGTTAGAGTCTAGGCTTAAATCTTTGAAAACTA
ACTTCTTTTTAATGATATTATCTAGTCTTGTTTTAAAGAAAGACCAAGCT
AGAACGATAAACTCGGTATGCATTCACTCACCCTCTGGATAAGGCTATCA
CTGTGTCTCACTAACATTCTGCCGATTGGTAGTGTGAAGGTCACAGACTT
GCACCGCGATGGACTGTGTTCGAATCTCAAGCACTTTCAGGCAGGATGTT
GTTAGGGAAACATGGTGATGTCTCTACTTTCACTTTAAGACCAAGCTTCT
TTGCTCGAAGTTTTGGGTAGGGCTTAAACAGACCATATTCTAACCAGACA
TCCTCCTTTATATGACCTTTTACGATAAATAAAACCTTTTTTTTCGGATT
TGCGATAATACTAACTGATACAAGTGAAAAAAAAAAATTAAAAGCAAAGT
TGCAACAAGAACCTTTCAAAATGAAATTTATACCAAAGATAGATTTATTA
TCCAAAGCTTCATTTCGAAATTTTCAAGGTTGAGGTCAGTGAGGTTTTTC
AAGAGAAAATACCCTTTTTTGGCTAAAGAGAATCTTTCACAATGTTTCAC
AATAGAGATGCTGTAAATCTCATCTTTATAATCTTCGCACGTTTTCGAAA
ATATATATTATTCGGTTTTAAATGTACTTTAAAAATTTGAAATTACAAAT
AACATCAAGATATGGGGAGTAATGGATATGGGATAGGTTAGCAGGAGGAT
TTCATTTATTGAGTTTCGCTTCTTTTTAACACCTCCGATATTTTTGTTGT
ATCATTTCGTATTTTTCACAATGACTTATTCTGAATTGACGTAAAAGAAA
CCTTGTTGATTTTAGCAGATATGGAAAAGAGACGAAAATAAAAGTTAAGG
TCAAAAGTTGTAGTATAGTGTAGTGTAGGTAAATTATTCTTCATGCGCAT
ACAGTGGTAAAGTCGATAGTTTGAATGATAATTGGTAGTAGGTCTCAATA
AGAGGAGAATTATGGTGCCGTTTTCTGGGTCTGAGGCCCCGAGTTATTGC
ATTGATGTCACTATTTCTTGGGTAGAGCCCTCAAAATTTTGATATAAATT
GACATCCTAGTCTCTTACAGTAACAACATCAATCAATTAATTGACTTTGC
CTTTAACCTTACACACTTTAGTTTGTTTGTAATCTAATTTGTAATCTTGT
AAAAAACAAATAGCTACTAGGCTAATACAAGTCAACCTATTTACAACATT
GTATGGAGATCTTAAATCTTAAATGCAGTTGTAGAAGGTTATAGGGTTCC
TTACTATGCAACTCAAAAAATACTGATGTTCATCTTGTCTAATTTTTAGA
TATTCTATTCAAAGAAACGATAAAAAGTTCGACTTTTCCCAATGAAACCC
GTGTTCGTTTTGGTCATAAAAGAAACTAATGAATATAGTTTTGTTTTTAT
ATTTTTAGATGGGTACAGAATGGAAACTAGATAGTCAATTACGTGCCAGT
TTGGAGCGCATCGAAAAAATCGTCTTCAAGCTACAAGACAGTGAAAATGG
AGTTCCCATCACCAACGCTAAAGCTTTGTTTCACACCATACCTAACGTCT
GTACTGGCGCTGATATCGTCACTTGGCTTAAGAATGACCTTGAGTTGAAA
ACACGTGCCGAGGCTTTGAATGTCGCTCGTACTATTGCCAAATATGGTTA
CATCTTTGTAGCCAGTGACAGTAAACTTACCGTCAAAGATGATTTAACAC
ACCACCGATTTCAACACGAGTTTTTCTGGCCAACTAAAGAAAGAGCTATA
TCGAATTCTGATTATGCTGTCCATCTATGTAAACGTCTGTTTTCCAATAA
AAATCGATCAAACCTTGAAGTTTACGAGATGGATCAATTCACACGCTTGC
AACGTCATTTAGGTCATAAATGGGAACACATTTGGGTACAAGCTGAAGCA
AGTTATAAAGTTGATAAGAAAAAGTCTAAAGCCGAGCAATACGTCATTGA
AAGCCAAGAAAGAGCTTTTTGGAATTTACACAAACCGCCACCCTATTCTG
ATTATGTTTTAGCTGCTGATCCTTTGAAGTTTAAAAAGAATGCAACAACC
GAGGCTATTACTCCGCTTTCTCCCGATCGCGCCGCCTCAACGCCTTCCAT
TTTGAGGCGCCATTCAGTTGATTCTTTAAGAGATGACGCCATGAAGCTTG
GAACCGCCCTTCAAAAAGCAGAAGCACCAAAAGCTGTTGAAAGTTTGATA
TCTTATTGTATGCAGTACAATAAATTCGACCCTTTACTCCGACAACCGAG
TACTACCTCGAGTAACTCGGCTTTTTACACGGAAGAGTCGAACAACTCGA
ATGATGCTTCCAGACGTGGATCACAACAGGTGGAACGCTGGGCGATATCA
TTGGAGGAGCTATTACGTGATAAGGAAGGGGTACTCGTCTTTTTAAAACA
TTTAGAAAAAGAACACAGCTCTGAGAATTTACGTTTTTGGTTAGCTTGTG
AAGAATACAAGGCGTGCCCTTTAAAGAAAGTTCCTGAAAAAGCTGAACAA
ATTTATAAAGAATATCTATCTCGTTCTGCATTTTATCAAGTGAATTTAGA
CAGTAAACTTATGGTTGATGTCGAAGAGGGTATGAAAAACCCGAACCATT
TTACCTTTCGGGCTGCCCAACATGAAATCTTTCGTCTCATGCGATCAGAC
AGCTATCCGCGTTTCTTGAAATCCGAAAATTTTGTCATGTTATCGAAAGA
AGCGAATTCACCGAGTCATAAAGGACAAGAGAAGAAAGGAATTTTATCCA
TTTTGACGAGTCCTCAACATAAAGTATAGATGTGGGTTATTTGTGTGTTT
TTTTTTTGTCAAACTCGTTCATTTTTGTTTGTCTATCTTCGTATGGAAAT
CTGCTGGTGATTTTTTATATAGTGTATGACGTATTTTGTGTTAGATTATT
TTTTAGAGATAATATACTTGCTATGATTTTTATTACAATCGGTTGTATCT
ACCATTTAATTGATTTCTCTTTCAAATTATACCTCAACCTATTTGACAGC
TTTTTATAACTGGCCATGGTCGCGAGTTTTCCGATATACCTGTTTTGAAC
CATAATTCGTTTTGTGCAGTTCCGTTTTAGGAAAAATAAGTCTTTGTTTA
GCATAATTTTCCATCCCCCCTTATTCCTCCTTCAAGCCTTGGTTCCTTTC
CCCGGCCAGCTAAGTGAATACTTTTTGACTTTTCGACGATCGTGTAATTG
AGGATAAAATCAAACCTCATGTTGTATAGATTAGCTTTATCTAGTACATT
TATTGCTGACAAAATTTTTATCGCGTTCATTTTTTGTACATAATTATTTG
TAGCTCTTAGACAATACTTTCCTTTCTTCGCTGCAAAGATTCATGAAGCG
TCCCTTTCAACCAATAACGAAAATTGGTTATTTGGGAAAACGAACACTTT
GGTTTAACTCACTAAAGAATTTTGTTTACTGAGCACACAAGATTAATCTT
TCGTAAGTTAAACCATGATGCTCTGTTTTTACCCAATTCTGACGTCATGC
CGTGGCAAAAAATCTTTGAAACAAGTAGCAGAATTTTTTGACATCTTTTC
TGTCGATAAATTTTTAAAACTCGTTGTCCTTTGAACAGATTAAACTTCAA
GGTCTTTTAAATCACGTCTTTTTCTTAGCTAAGAAAATAATTTTACCTCA
AGTAAC

Coding sequence (CDS) from alignment at scaffold_120:362337..376842-

>TCONS_00047068 ID=TCONS_00047068|Name=TCONS_00047068|organism=Clytia hemisphaerica|type=CDS|length=3402bp|location=Sequence derived from alignment at scaffold_120:362337..376842- (Clytia hemisphaerica)
ATGGGTACAGAATGGAAACTAGATAGTCAATTACGTGCCAGTTTGGAGCG
CATCGAAAAAATCGTCTTCAAGCTACAAGACAGTGAAAATGGAGTTCCCA
TCACCAACGCTAAAGCTTTGTTTCACACCATACCTAACGTCTGTACTGGC
GCTGATATCGTCACTTGGCTTAAGAATGACCTTGAGTTGAAAACACGTGC
CGAGGCTTTGAATGTCGCTCGTACTATTGCCAAATATGGTTACATCTTTG
TAGCCAGTGACAGTAAACTTACCGTCAAAGATGATTTAACACACCACCGA
TTTCAACACGAGTTTTTCTGGCCAACTAAAGAAAGAGCTATATCGAATTC
TGATTATGCTGTCCATCTATGTAAACGTCTGTTTTCCAATAAAAATCGAT
CAAACCTTGAAGTTTACGAGATGGATCAATTCACACGCTTGCAACGTCAT
TTAGGTCATAAATGGGAACACATTTGGGTACAAGCTGAAGCAAGTTATAA
AGTTGATAAGAAAAAGTCTAAAGCCGAGCAATACGTCATTGAAAGCCAAG
AAAGAGCTTTTTGGAATTTACACAAACCGCCACCCTATTCTGATTATGTT
TTAGCTGCTGATCCTTTGAAGTTTAAAAAGAATGCAACAACCGAGGCTAT
TACTCCGCTTTCTCCCGATCGCGCCGCCTCAACGCCTTCCATTTTGAGGC
GCCATTCAGTTGATTCTTTAAGAGATGACGCCATGAAGCTTGGAACCGCC
CTTCAAAAAGCAGAAGCACCAAAAGCTGTTGAAAGTTTGATATCTTATTG
TATGCAGTACAATAAATTCGACCCTTTACTCCGACAACCGAGTACTACCT
CGAGTAACTCGGCTTTTTACACGGAAGAGTCGAACAACTCGAATGATGCT
TCCAGACGTGGATCACAACAGGTGGAACGCTGGGCGATATCATTGGAGGA
GCTATTACGTGATAAGGAAGGGGTACTCGTCTTTTTAAAACATTTAGAAA
AAGAACACAGCTCTGAGAATTTACGTTTTTGGTTAGCTTGTGAAGAATAC
AAGGCGTGCCCTTTAAAGAAAGTTCCTGAAAAAGCTGAACAAATTTATAA
AGAATATCTATCTCGTTCTGCATTTTATCAAGTGAATTTAGACAGTAAAC
TTATGGTTGATGTCGAAGAGGGTATGAAAAACCCGAACCATTTTACCTTT
CGGGCTGCCCAACATGAAATCTTTCGTCTCATGCGATCAGACAGCTATCC
GCGTTTCTTGAAATCCGAAAATTTTGTCATGTTATCGAAAGAAGCGAATT
CACCGAGTCATAAAGGACAAGAGAAGAAAGGAATTTTATCCATTTTGACG
AGTCCTCAACATAAAGTATAGTTTTTGTGTGTTCTAACGTATAATACGGC
TGGCAATATTGGATCTTTTTACTCTTTCAAAATGGATCAGATTTTATTTC
TATTGGGTGACAGTGAAATGAAATCATTGTTATCAACACGTAGAAACAGT
CCAACGCCTTCACGTAAAGTTTCAACGCCAGGGCGTGATTATCAATCACC
TACCACCTCCAATCATAAACGACATAAAAGCGTTCCCAACACTGCTGGCG
TGACGCCTGTGTGGTATGCGTCAGTTGTTGACGAGTTAAAAAGAAGGGAA
GAAGAAAATAAGATACATACGATAGATGAACAAAAGGCGGGTTGTGAGAA
GATGGGTACAGAATGGAAACTAGATAGTCAATTACGTGCCAGTTTGGAGC
GCATCGAAAAAATCGTCTTCAAGCTACAAGACAGTGAAAATGGAGTTCCC
ATCACCAACGCTAAAGCTTTGTTTCACACCATACCTAACGTCTGTACTGG
CGCTGATATCGTCACTTGGCTTAAGAATGACCTTGAGTTGAAAACACGTG
CCGAGGCTTTGAATGTCGCTCGTACTATTGCCAAATATGGTTACATCTTT
GTAGCCAGTGACAGTAAACTTACCGTCAAAGATGATTTAACACACCACCG
ATTTCAACACGAGTTTTTCTGGCCAACTAAAGAAAGAGCTATATCGAATT
CTGATTATGCTGTCCATCTATGTAAACGTCTGTTTTCCAATAAAAATCGA
TCAAACCTTGAAGTTTACGAGATGGATCAATTCACACGCTTGCAACGTCA
TTTAGGTCATAAATGGGAACACATTTGGGTACAAGCTGAAGCAAGTTATA
AAGTTGATAAGAAAAAGTCTAAAGCCGAGCAATACGTCATTGAAAGCCAA
GAAAGAGCTTTTTGGAATTTACACAAACCGCCACCCTATTCTGATTATGT
TTTAGCTGCTGATCCTTTGAAGTTTAAAAAGAATGCAACAACCGAGGCTA
TTACTCCGCTTTCTCCCGATCGCGCCGCCTCAACGCCTTCCATTTTGAGG
CGCCATTCAGTTGATTCTTTAAGAGATGACGCCATGAAGCTTGGAACCGC
CCTTCAAAAAGCAGAAGCACCAAAAGCTGTTGAAAGTTTGATATCTTATT
GTATGCAGTACAATAAATTCGACCCTTTACTCCGACAACCGAGTACTACC
TCGAGTAACTCGGCTTTTTACACGGAAGAGTCGAACAACTCGAATGATGC
TTCCAGACGTGGATCACAACAGGTGGAACGCTGGGCGATATCATTGGAGG
AGCTATTACGTGATAAGGAAGGGGTACTCGTCTTTTTAAAACATTTAGAA
AAAGAACACAGCTCTGAGAATTTACGTTTTTGGTTAGCTTGTGAAGAATA
CAAGGCGTGCCCTTTAAAGAAAGTTCCTGAAAAAGCTGAACAAATTTATA
AAGAATATCTATCTCGTTCTGCATTTTATCAAGTGAATTTAGACAGTAAA
CTTATGGTTGATGTCGAAGAGGGTATGAAAAACCCGAACCATTTTACCTT
TCGGGCTGCCCAACATGAAATCTTTCGTCTCATGCGATCAGACAGCTATC
CGCGTTTCTTGAAATCCGAAAATTTTGTCATGTTATCGAAAGAAGCGAAT
TCACCGAGTCATAAAGGACAAGAGAAGAAAGGAATTTTATCCATTTTGAC
GAGTCCTCAACATAAAGTATAGTTTTTGTGTGTTCTAACGTATAATACGG
CTGGCAATATTGGATCTTTTTACTCTTTCAAAATGGATCAGATTTTATTT
CTATTGGGTGACAGTGAAATGAAATCATTGTTATCAACACGTAGAAACAG
TCCAACGCCTTCACGTAAAGTTTCAACGCCAGGGCGTGATTATCAATCAC
CTACCACCTCCAATCATAAACGACATAAAAGCGTTCCCAACACTGCTGGC
GTGACGCCTGTGTGGTATGCGTCAGTTGTTGACGAGTTAAAAAGAAGGGA
AGAAGAAAATAAGATACATACGATAGATGAACAAAAGGCGGGTTGTGAGA
AG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030008	XLOC_030008	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00047068-protein	TCONS_00047068-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00047068-exon-scaffold_120-1575043694:376511..376842	TCONS_00047068-exon-scaffold_120-1575043694:376511..376842	Clytia hemisphaerica	exon
TCONS_00047068-exon-scaffold_120-1575043694:362337..364584	TCONS_00047068-exon-scaffold_120-1575043694:362337..364584	Clytia hemisphaerica	exon
TCONS_00047068-exon-scaffold_120-1510915933:376511..376842	TCONS_00047068-exon-scaffold_120-1510915933:376511..376842	Clytia hemisphaerica	exon
TCONS_00047068-exon-scaffold_120-1510915933:362337..364584	TCONS_00047068-exon-scaffold_120-1510915933:362337..364584	Clytia hemisphaerica	exon
TCONS_00047068-exon-scaffold_120-1491911889:376511..376842	TCONS_00047068-exon-scaffold_120-1491911889:376511..376842	Clytia hemisphaerica	exon
TCONS_00047068-exon-scaffold_120-1491911889:362337..364584	TCONS_00047068-exon-scaffold_120-1491911889:362337..364584	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_120	supercontig	scaffold_120:362337..376842 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.27719	0.643654	0	0.18279	0.258878	0	0	0.267528	1.75841	1.03344	1.7891	1.12238	2.12238	1.89422	1.96769	2.21219	3.96398	2.26001	2.9408	1.31485	3.62096	2.9288	1.1352	2.25696	1.18428	1.68106	0.466749	0.280601	0.442172	0.559807

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR016137	RGS
IPR000591	DEP_dom
IPR024066	RGS_subdom1
IPR011991	WHTH_DNA-bd_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0035556	intracellular signal transduction

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction

Blast

[Close]

BLAST of TCONS_00047068 vs. Swiss-Prot (Human)
Match: RGS6 (Regulator of G-protein signaling 6 OS=Homo sapiens GN=RGS6 PE=1 SV=5)

HSP 1 Score: 298.901 bits (764), Expect = 5.172e-91
Identity = 177/451 (39.25%), Postives = 258/451 (57.21%), Query Frame = 3

Query:  381 RIEKIVFKLQDSE-NGVPITNAKALFHTIPNVCTGADIVTWLKNDLELKTRAEALNVARTIAKYGYIFVASDSKLTVKDDLTHHRFQHEFFWPTKERAISNSDYAVHLCKRLFSNKNRSNLEVYEMDQFTRLQRHLGHKWEHIWVQAEASYKVDKKKSKAEQYVIESQERAFWNLHKPPPYSDYVLAAD---------PLKFKKN--ATTEAITPLSPDRAASTPSILRRHSVDSLRDDAMKLGTALQK--AEAPKAVESLISYCMQYNKFDPLLR--QPST--TSSNSAFYTEESNNSNDASRRGSQQ-VERWAISLEELLRDKEGVLVFLKHLEKEHSSENLRFWLACEEYKACPLKKVPEKAEQIYKEYLSRSAFYQVNLDSKLMVDVEEGMKNPNHFTFRAAQHEIFRLMRSDSYPRFLKSENF--VMLSKEANSPSHKGQEKKGIL 1670
            +IE I+ K+QD +  GVPI   K+    IP+V TG DIV WL  +L ++   EA+++   IA  GYIF  SD  LT+KDD T +RFQ  +FWP+      N+DYA++LCKR   NK R  L  YE +   RLQR    KWE I++QAEA  K+D+KK K E+ +++SQERAFW++H+P P        D         P K KK+    TE     SP    S P  +R+ + + +R     L   + +   +  K  ESLI+Y  QY ++DPL+   +PS    S + A +  E       S+  SQQ V+RW  S +E+L+D+ G   FL+ LE E SSENLRFWLA ++ K  PL+ V ++ E+I++E+L+  A   +NLDS       + +K+   +TF  AQ  I++LM+SDSY RFL+S  +  ++L+K+    S  G+   G++
Sbjct:   28 KIEDIITKMQDDKTGGVPIRTVKSFLSKIPSVVTGTDIVQWLMKNLSIEDPVEAIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYFWPSNCWEPENTDYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDSQERAFWDVHRPVPGCVNTTEMDIRKCRRLKNPQKVKKSVYGVTEESQAQSPVHVLSQP--IRKTTKEDIRKQITFLNAQIDRHCLKMSKVAESLIAYTEQYVEYDPLITPAEPSNPWISDDVALWDIE------MSKEPSQQRVKRWGFSFDEILKDQVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVAKRVEEIWQEFLAPGAPSAINLDSHSYEITSQNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGK-SLAGKRLTGLM 469

The following BLAST results are available for this feature:

BLAST of TCONS_00047068 vs. Swiss-Prot (Human)

BLAST of TCONS_00047068 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RGS6	5.172e-91	39.25	Regulator of G-protein signaling 6 OS=Homo sapiens...	[more]

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TCONS_00047068 (transcript) - C. hemisphaerica