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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047075 ID=TCONS_00047075|Name=TCONS_00047075|organism=Clytia hemisphaerica|type=transcript|length=2885bp
TGAAAAATGAACGTGTTAGCTGATACTGAAATAGCGATTCAAACATTTTA
TCATTCACAAGTCGAAGAACAACGCAATGAAGCACACAGATGGCTGCTTG
AGCTTCAAAAGTCACCACAGGCATGGCAAGTCTCATTATTATTGTTAGAT
GCAACAAAACCAACAGAATGTCAATATTATGGTGCAGTTATATTACACTA
CAAGATTTGTCATATGATGACAGAAGTTGGTGAAAAAGAAGTAcaagatt
taaaaaacaagCTGGTTTTATTGATATCTTCAGCTTGCTCAGGTGCAAAG
TTTGTTAGGACTAAATTATGCTCAATATTTGCAGTCTTGGTTTTACAAAC
CATGCAAGAGTCTGAGACATTGCTGACTTGTATCACCCAAGTCAGCTCTC
ATTTTCAGAATGTTAGTCCTCAACAATCAAAAGAagttattttacaaata
ttgatTGAATTCCCATCACAATTTAAAAACCTGAACATGGATTCAAGTAA
AAGATTGAAAGCAAGAGATTTTATGGTTCAATTTGCAGAACCACTGTTAT
CAATGTGGAATGAAATTTTAGCTGGACATTACCCATCTGACGAAACATGT
AGTAGATTGACGTTAACTTTTTGGTATCATCTACAAGATGATTTAGTGGA
TGTCACAGTgactgattttcaaaaacagtTCCAAGATGCTTTTCTAATGT
TGGTTGATGTGTATTTTGTTAAAGGACAGTACCCACCTGATGAGGTATAC
AATAAATACACTAGCGAAGAGAAAGAACTTTTTCGTTGTTATCGTATTGA
CATTCAAGACACTATCATGTATTTACATCACACGTTGAGAGATCGCTGTT
TATcttatttcattgaaaaattatcCAGCCTGTTATCATctggGCAATCA
ACGTGGCAACAATATGAATCGGTGCTCTATCTTCTATCTGGTACAACGGG
CACTATAGACAGCGAGGATAAAGTCTACATGCCGAACATCATACAACTTC
TTAAAAAAGTACCAAACCATCCGAAGATTCATGATACCCTGTACACTTTC
CTGGGCGGTCTTGGAGAATGGTTAATTTACAATCAAAACCACATCGAAGA
TTTGCTACCGTTTCTGTTGTCTGGTATGAACGAATCTAACAACCAAATCA
TGAGCTCTTGCAGTTTGTCTTTGCAAGATATTTGTCAAGAATGTGCTCAA
TTACTTAGCCGACAATCTGTTATGAAAGTATTACAAGTCTGCCGTGATAC
ATTACAACGTCCGAATTGCCCAGCTAAAGTTTGTGTACGTTTATTTCAAG
TGGCCGGATATGTGATATCAGTTCTACCAGCCTCTGAAATACGAAACGAA
CTTGAGATCATGGTTGCACCCTTGCTACATAATTTTAAAAGCTTGTTGGG
AAGTAAAGCTCAAGGACCTGAGGTCGTAGAGCAGATCTGCCATTGCTTAA
ACTGTTTGACAGCTATGTTTAGGTCTTTGGATCCTTTCGAAGAACAAGCT
GTCCATCCCATCTCTATTGTTTATGAGCAATTATTACAAATTCTACCTTT
AATTAAAGGATACTGTACTGAAGAAATCATCATGCTTGCTGCTACGGGCT
GCGTCTCAAAAGCTGTTGAAATTGTACGAGAAAAGTTGGCACCTTTTGTC
AATGCGACTTGCCAACTACTTTTTGATTGTTTCAGTGCATGCCCAATGTG
GTGTATAATGAATACAGCTTCCCTAGTTATTGGTATGTTTGGTTCGGAAG
AAATCACTTCACAAGCTATCAAAGAGTTCTTCGTTGCTATTACTACCTCA
TGTTTGACTTTGAACAGTACTGACAACACCGACTCCATGCAAGGTTTGAT
GGAGATGATGACCAAAGTTATCAGAACTGTACCTGAATTTTTCTTTGAGG
GAACTGAATTTCAAGAAGTGTTGGTTAAACGTGCTTTAGAGTTAATGACT
TTACAAGAGACTCCTACTATTAAGAGTACATGTCACTTTGTTGTTACGTA
CCTGGGTGTGGTTTCCGTGTATGATACTGGCAAAGAAGTGTTTTTGCGAT
GTGGAAAAGATATTATTGGTCGGGTTTTACTTTGCATTGGTGTTACTGCT
CCTAGATCACTATTAGATAACTACTCAGATGTCTTGTTAGCTAttaataa
aaacttttcaaccGAAAGCTCTGTATGGTTAAATGAGTTGTTACTCACAG
AGAATTTCCCCACTGCTGTACCTACTCAACAACAAAAAGAGTTGTTCCGT
AAAATGGTGATTAAAGAACGGTCAAGTAAGAACCGACTTCGAGAAACTGT
TAGAAATTTTGCTTTATTATGTCGTGGTTTGATGGGACTGACTTATGTTC
AATGAAATATTATAGGAACGTTTAACAAGAAGAAATCCCTCTTTGAAGGG
AAATTGACTAAAATTGCGATGGTTTCTGTGCAGTCAGCAGATCTTATtgg
aaaagttcaattttttgcatCGCATTCTTCGTTTGAAATGCCGAAAATGT
CATATTTCTTGGTACTAATTTTTGCTTAACTGCATAGGCATTTTATCAAG
AGCCGAAGCCTGTATCTTACTATGGCTCCTATGCAAGATAATTTCATTTC
TCTccaattttatgaattttaaccCGATTACTCTCCACCTCTACAATTAA
GCAAATAAtagtattttgatttttgataaattttgagcCTAACTTTTCAT
TGTTTATACATACCATGCATCTGCATACATTGGTAAGTTTTTTCTTCGGT
TTTTGGTATTTATCTTCATGTTTTAGCTAGAATTAgggtttatttttttt
ctatttttttttctattaaatatttttctattttttgttgttttaaataa
tctattttaatcaaaaagattttagaacCTAGAAC Run BLAST on NCBI protein sequence of TCONS_00047075-protein >TCONS_00047075-protein ID=TCONS_00047075-protein|Name=TCONS_00047075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=782bp
MNVLADTEIAIQTFYHSQVEEQRNEAHRWLLELQKSPQAWQVSLLLLDAT
KPTECQYYGAVILHYKICHMMTEVGEKEVQDLKNKLVLLISSACSGAKFV
RTKLCSIFAVLVLQTMQESETLLTCITQVSSHFQNVSPQQSKEVILQILI
EFPSQFKNLNMDSSKRLKARDFMVQFAEPLLSMWNEILAGHYPSDETCSR
LTLTFWYHLQDDLVDVTVTDFQKQFQDAFLMLVDVYFVKGQYPPDEVYNK
YTSEEKELFRCYRIDIQDTIMYLHHTLRDRCLSYFIEKLSSLLSSGQSTW
QQYESVLYLLSGTTGTIDSEDKVYMPNIIQLLKKVPNHPKIHDTLYTFLG
GLGEWLIYNQNHIEDLLPFLLSGMNESNNQIMSSCSLSLQDICQECAQLL
SRQSVMKVLQVCRDTLQRPNCPAKVCVRLFQVAGYVISVLPASEIRNELE
IMVAPLLHNFKSLLGSKAQGPEVVEQICHCLNCLTAMFRSLDPFEEQAVH
PISIVYEQLLQILPLIKGYCTEEIIMLAATGCVSKAVEIVREKLAPFVNA
TCQLLFDCFSACPMWCIMNTASLVIGMFGSEEITSQAIKEFFVAITTSCL
TLNSTDNTDSMQGLMEMMTKVIRTVPEFFFEGTEFQEVLVKRALELMTLQ
ETPTIKSTCHFVVTYLGVVSVYDTGKEVFLRCGKDIIGRVLLCIGVTAPR
SLLDNYSDVLLAINKNFSTESSVWLNELLLTENFPTAVPTQQQKELFRKM
VIKERSSKNRLRETVRNFALLCRGLMGLTYVQ Run BLAST on NCBI transcript from alignment at scaffold_120:412342..416679- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047075 ID=TCONS_00047075|Name=TCONS_00047075|organism=Clytia hemisphaerica|type=transcript|length=4338bp|location=Sequence derived from alignment at scaffold_120:412342..416679- (Clytia hemisphaerica)
TGAAAAATGAACGTGTTAGCTGATACTGAAATAGCGATTCAAACATTTTA
TCATTCACAAGTCGAAGAACAACGCAATGAAGCACACAGATGGCTGCTTG
AGCTTCAAAAGTCACCACAGGCATGGCAAGTCTCATTATTATTGTTAGAT
GCAACAAAACCAACAGAATGTCAATATTATGGTGCAGTTATATTACACTA
CAAGATTTGTCATATGATGACAGAAGTTGGTGAAAAAGAAGTACAAGATT
TAAAAAACAAGCTGGTTTTATTGATATCTTCAGCTTGCTCAGGTGCAAAG
TTTGTTAGGACTAAATTATGCTCAATATTTGCAGTCTTGGTTTTACAAAC
CATGCAAGAGTCTGAGACATTGCTGACTTGTATCACCCAAGTCAGCTCTC
ATTTTCAGAATGTTAGTCCTCAACAATCAAAAGAAGTTATTTTACAAATA
TTGATTGAATTCCCATCACAATTTAAAAACCTGAACATGGATTCAAGTAA
AAGATTGAAAGCAAGAGATTTTATGGTTCAATTTGCAGAACCACTGTTAT
CAATGTGGAATGAAATTTTAGCTGGTAAAGATGTTGAAATGAAAAATGAA
GCCTTGTCTTGTATGTTAGGTTGGATAGGTTTTGGTATATCTGCACTTGA
TATTGTGCCTTTAATACCAATTTTATTGAATCATATTGAAACTGAAGAAC
TCACTTCAAAAGTGTGTGAAGTCATAAGTGATGCTTTGACCGACCCTAGT
AGTTACTCTCTAGTCTCAAGTGTATTTGAATCTATAGAGAAATTATTATT
GTTGGAACCTCTCATAGAAAAAGCATTACAGGATGAAAATGATGATTTTG
CATATAATGTTTGTATGATGATGGCCAATATTGGCGAGACGCATTCCAAC
ATCTTAGTCGCTACCAATAACCCAAGCCAACAAATGCTTGCCCTTCGATT
GACCAAATTGATATTAAAATTTTCATCCATGCCAGGACATTACCCATCTG
ACGAAACATGTAGTAGATTGACGTTAACTTTTTGGTATCATCTACAAGAT
GATTTAGTGGATGTCACAGTGACTGATTTTCAAAAACAGTTCCAAGATGC
TTTTCTAATGTTGGTTGATGTGTATTTTGTTAAAGGACAGTACCCACCTG
ATGAGGTATACAATAAATACACTAGCGAAGAGAAAGAACTTTTTCGTTGT
TATCGTATTGACATTCAAGACACTATCATGTATTTACATCACACGTTGAG
AGATCGCTGTTTATCTTATTTCATTGAAAAATTATCCAGCCTGTTATCAT
GTAAGTGACCTTTCTTTTTTGCCAAATTTTTTTTATTCTTTAAAATAAAA
AAGCAAGACCAAAGCAAAAGGGATTTTCGAATCTTGCTACTAGCCTTTGG
AAGGGTTCATTTTTTCTGCAAACCCCTGGTTGGCGGGTCCTCAAAATAAA
CAGTAATATCTGGTAACATCATTATATCTAAGCAGATAAAAACTGGCCAG
TTTTTTGAAGAGTTTGGTAATTATGATTACTACCGGGTATTTCAAAAAAA
AAAGCGTACAAGTTTGAATTGAGGTTGTGAGAAAGCTAAAAATGTTATAA
ATCTTAACTTTTTGCCATTAAATGGAGGAATGACTAACTTAAAATTTGAG
CTTTTGAGCTATCATACTTAATATTTGTTTTGCGCATTCAAAAGGTATTA
AGAAAATTCGAAAAAGTTCTCTTTCGAAAAAGTCTCATTTAATTGAGAAA
ATATGGGATCAAATTCAAGCTTACAAAACACTGAAAACAGCTTTTTTTGC
TACTTTTTTTAACACCGAAAGTTTTGAGGGCCTTTTGAATGTTTGATGAT
TATCAAAAGAAATAAAAAATATTAATTACAGCCATCAAAACTTTAAACTG
ACTGTGTTTTCTTGCACAAAAGGGAAAGAGAAAAAAAAATTGATCCACTC
TTTTTTCTCAAAAATGACGCTTTTTCAAAAGAGAATTTTTTCGAATTATC
TTCATAACTTTTGAACACGTGAAGCAAATTTAAAGTATGATAGCTCAAAA
TTTAAGTTATTTTACCTCTTTTTAATGGTGAAAAGTTTAGATTTATAGCA
TTGTTAGTTTTCTCACAATAATAATTCAAAGTTGTACACTTTTGAAACAC
CAGGTATATTCGTCTGGACACAGAAAAAATGCCCCTTTTTCCAGTTCTTT
TGTCAGTGAAGGAGAAAGATTCTCAACCAAAAGCTTGGGAAAAGTATTTA
GAAAACTTCTGGGAACCTTTCAAGAGTTTGACCAAAAGCTAAAGATACCT
CAAGTTGATCTTTTCATAGTTCAGATCCTTTTTATTTTTCAGCTGGGCAA
TCAACGTGGCAACAATATGAATCGGTGCTCTATCTTCTATCTGGTACAAC
GGGCACTATAGACAGCGAGGATAAAGTCTACATGCCGAACATCATACAAC
TTCTTAAAAAAGTACCAAACCATCCGAAGATTCATGATACCCTGTACACT
TTCCTGGGCGGTCTTGGAGAATGGTTAATTTACAATCAAAACCACATCGA
AGATTTGCTACCGTTTCTGTTGTCTGGTATGAACGAATCTAACAACCAAA
TCATGAGCTCTTGCAGTTTGTCTTTGCAAGATATTTGTCAAGAATGTGCT
CAATTACTTAGCCGACAATCTGTTATGAAAGTATTACAAGTCTGCCGTGA
TACATTACAACGTCCGAATTGCCCAGCTAAAGTTTGTGTACGTTTATTTC
AAGTGGCCGGATATGTGATATCAGTTCTACCAGCCTCTGAAATACGAAAC
GAACTTGAGATCATGGTTGCACCCTTGCTACATAATTTTAAAAGCTTGTT
GGGAAGTAAAGCTCAAGGACCTGAGGTCGTAGAGCAGATCTGCCATTGCT
TAAACTGTTTGACAGCTATGTTTAGGTCTTTGGATCCTTTCGAAGAACAA
GCTGTCCATCCCATCTCTATTGTTTATGAGCAATTATTACAAATTCTACC
TTTAATTAAAGGATACTGTACTGAAGAAATCATCATGCTTGCTGCTACGG
GCTGCGTCTCAAAAGCTGTTGAAATTGTACGAGAAAAGTTGGCACCTTTT
GTCAATGCGACTTGCCAACTACTTTTTGATTGTTTCAGTGCATGCCCAAT
GTGGTGTATAATGAATACAGCTTCCCTAGTTATTGGTATGTTTGGTTCGG
AAGAAATCACTTCACAAGCTATCAAAGAGTTCTTCGTTGCTATTACTACC
TCATGTTTGACTTTGAACAGTACTGACAACACCGACTCCATGCAAGGTTT
GATGGAGATGATGACCAAAGTTATCAGAACTGTACCTGAATTTTTCTTTG
AGGGAACTGAATTTCAAGAAGTGTTGGTTAAACGTGCTTTAGAGTTAATG
ACTTTACAAGAGACTCCTACTATTAAGAGTACATGTCACTTTGTTGTTAC
GTACCTGGGTGTGGTTTCCGTGTATGATACTGGCAAAGAAGTGTTTTTGC
GATGTGGAAAAGATATTATTGGTCGGGTTTTACTTTGCATTGGTGTTACT
GCTCCTAGATCACTATTAGATAACTACTCAGATGTCTTGTTAGCTATTAA
TAAAAACTTTTCAACCGAAAGCTCTGTATGGTTAAATGAGTTGTTACTCA
CAGAGAATTTCCCCACTGCTGTACCTACTCAACAACAAAAAGAGTTGTTC
CGTAAAATGGTGATTAAAGAACGGTCAAGTAAGAACCGACTTCGAGAAAC
TGTTAGAAATTTTGCTTTATTATGTCGTGGTTTGATGGGACTGACTTATG
TTCAATGAAATATTATAGGAACGTTTAACAAGAAGAAATCCCTCTTTGAA
GGGAAATTGACTAAAATTGCGATGGTTTCTGTGCAGTCAGCAGATCTTAT
TGGAAAAGTTCAATTTTTTGCATCGCATTCTTCGTTTGAAATGCCGAAAA
TGTCATATTTCTTGGTACTAATTTTTGCTTAACTGCATAGGCATTTTATC
AAGAGCCGAAGCCTGTATCTTACTATGGCTCCTATGCAAGATAATTTCAT
TTCTCTCCAATTTTATGAATTTTAACCCGATTACTCTCCACCTCTACAAT
TAAGCAAATAATAGTATTTTGATTTTTGATAAATTTTGAGCCTAACTTTT
CATTGTTTATACATACCATGCATCTGCATACATTGGTAAGTTTTTTCTTC
GGTTTTTGGTATTTATCTTCATGTTTTAGCTAGAATTAGGGTTTATTTTT
TTTCTATTTTTTTTTCTATTAAATATTTTTCTATTTTTTGTTGTTTTAAA
TAATCTATTTTAATCAAAAAGATTTTAGAACCTAGAAC Coding sequence (CDS) from alignment at scaffold_120:412342..416679- >TCONS_00047075 ID=TCONS_00047075|Name=TCONS_00047075|organism=Clytia hemisphaerica|type=CDS|length=7047bp|location=Sequence derived from alignment at scaffold_120:412342..416679- (Clytia hemisphaerica)
CTGGGCAATCAACGTGGCAACAATATGAATCGGTGCTCTATCTTCTATCT
GGTACAACGGGCACTATAGACAGCGAGGATAAAGTCTACATGCCGAACAT
CATACAACTTCTTAAAAAAGTACCAAACCATCCGAAGATTCATGATACCC
TGTACACTTTCCTGGGCGGTCTTGGAGAATGGTTAATTTACAATCAAAAC
CACATCGAAGATTTGCTACCGTTTCTGTTGTCTGGTATGAACGAATCTAA
CAACCAAATCATGAGCTCTTGCAGTTTGTCTTTGCAAGATATTTGTCAAG
AATGTGCTCAATTACTTAGCCGACAATCTGTTATGAAAGTATTACAAGTC
TGCCGTGATACATTACAACGTCCGAATTGCCCAGCTAAAGTTTGTGTACG
TTTATTTCAAGTGGCCGGATATGTGATATCAGTTCTACCAGCCTCTGAAA
TACGAAACGAACTTGAGATCATGGTTGCACCCTTGCTACATAATTTTAAA
AGCTTGTTGGGAAGTAAAGCTCAAGGACCTGAGGTCGTAGAGCAGATCTG
CCATTGCTTAAACTGTTTGACAGCTATGTTTAGGTCTTTGGATCCTTTCG
AAGAACAAGCTGTCCATCCCATCTCTATTGTTTATGAGCAATTATTACAA
ATTCTACCTTTAATTAAAGGATACTGTACTGAAGAAATCATCATGCTTGC
TGCTACGGGCTGCGTCTCAAAAGCTGTTGAAATTGTACGAGAAAAGTTGG
CACCTTTTGTCAATGCGACTTGCCAACTACTTTTTGATTGTTTCAGTGCA
TGCCCAATGTGGTGTATAATGAATACAGCTTCCCTAGTTATTGGTATGTT
TGGTTCGGAAGAAATCACTTCACAAGCTATCAAAGAGTTCTTCGTTGCTA
TTACTACCTCATGTTTGACTTTGAACAGTACTGACAACACCGACTCCATG
CAAGGTTTGATGGAGATGATGACCAAAGTTATCAGAACTGTACCTGAATT
TTTCTTTGAGGGAACTGAATTTCAAGAAGTGTTGGTTAAACGTGCTTTAG
AGTTAATGACTTTACAAGAGACTCCTACTATTAAGAGTACATGTCACTTT
GTTGTTACGTACCTGGGTGTGGTTTCCGTGTATGATACTGGCAAAGAAGT
GTTTTTGCGATGTGGAAAAGATATTATTGGTCGGGTTTTACTTTGCATTG
GTGTTACTGCTCCTAGATCACTATTAGATAACTACTCAGATGTCTTGTTA
GCTATTAATAAAAACTTTTCAACCGAAAGCTCTGTATGGTTAAATGAGTT
GTTACTCACAGAGAATTTCCCCACTGCTGTACCTACTCAACAACAAAAAG
AGTTGTTCCGTAAAATGGTGATTAAAGAACGGTCAAGTAAGAACCGACTT
CGAGAAACTGTTAGAAATTTTGCTTTATTATGTCGTGGTTTGATGGGACT
GACTTATGTTCAATGAGACATTACCCATCTGACGAAACATGTAGTAGATT
GACGTTAACTTTTTGGTATCATCTACAAGATGATTTAGTGGATGTCACAG
TGACTGATTTTCAAAAACAGTTCCAAGATGCTTTTCTAATGTTGGTTGAT
GTGTATTTTGTTAAAGGACAGTACCCACCTGATGAGGTATACAATAAATA
CACTAGCGAAGAGAAAGAACTTTTTCGTTGTTATCGTATTGACATTCAAG
ACACTATCATGTATTTACATCACACGTTGAGAGATCGCTGTTTATCTTAT
TTCATTGAAAAATTATCCAGCCTGTTATCATATGAACGTGTTAGCTGATA
CTGAAATAGCGATTCAAACATTTTATCATTCACAAGTCGAAGAACAACGC
AATGAAGCACACAGATGGCTGCTTGAGCTTCAAAAGTCACCACAGGCATG
GCAAGTCTCATTATTATTGTTAGATGCAACAAAACCAACAGAATGTCAAT
ATTATGGTGCAGTTATATTACACTACAAGATTTGTCATATGATGACAGAA
GTTGGTGAAAAAGAAGTACAAGATTTAAAAAACAAGCTGGTTTTATTGAT
ATCTTCAGCTTGCTCAGGTGCAAAGTTTGTTAGGACTAAATTATGCTCAA
TATTTGCAGTCTTGGTTTTACAAACCATGCAAGAGTCTGAGACATTGCTG
ACTTGTATCACCCAAGTCAGCTCTCATTTTCAGAATGTTAGTCCTCAACA
ATCAAAAGAAGTTATTTTACAAATATTGATTGAATTCCCATCACAATTTA
AAAACCTGAACATGGATTCAAGTAAAAGATTGAAAGCAAGAGATTTTATG
GTTCAATTTGCAGAACCACTGTTATCAATGTGGAATGAAATTTTAGCTGC
TGGGCAATCAACGTGGCAACAATATGAATCGGTGCTCTATCTTCTATCTG
GTACAACGGGCACTATAGACAGCGAGGATAAAGTCTACATGCCGAACATC
ATACAACTTCTTAAAAAAGTACCAAACCATCCGAAGATTCATGATACCCT
GTACACTTTCCTGGGCGGTCTTGGAGAATGGTTAATTTACAATCAAAACC
ACATCGAAGATTTGCTACCGTTTCTGTTGTCTGGTATGAACGAATCTAAC
AACCAAATCATGAGCTCTTGCAGTTTGTCTTTGCAAGATATTTGTCAAGA
ATGTGCTCAATTACTTAGCCGACAATCTGTTATGAAAGTATTACAAGTCT
GCCGTGATACATTACAACGTCCGAATTGCCCAGCTAAAGTTTGTGTACGT
TTATTTCAAGTGGCCGGATATGTGATATCAGTTCTACCAGCCTCTGAAAT
ACGAAACGAACTTGAGATCATGGTTGCACCCTTGCTACATAATTTTAAAA
GCTTGTTGGGAAGTAAAGCTCAAGGACCTGAGGTCGTAGAGCAGATCTGC
CATTGCTTAAACTGTTTGACAGCTATGTTTAGGTCTTTGGATCCTTTCGA
AGAACAAGCTGTCCATCCCATCTCTATTGTTTATGAGCAATTATTACAAA
TTCTACCTTTAATTAAAGGATACTGTACTGAAGAAATCATCATGCTTGCT
GCTACGGGCTGCGTCTCAAAAGCTGTTGAAATTGTACGAGAAAAGTTGGC
ACCTTTTGTCAATGCGACTTGCCAACTACTTTTTGATTGTTTCAGTGCAT
GCCCAATGTGGTGTATAATGAATACAGCTTCCCTAGTTATTGGTATGTTT
GGTTCGGAAGAAATCACTTCACAAGCTATCAAAGAGTTCTTCGTTGCTAT
TACTACCTCATGTTTGACTTTGAACAGTACTGACAACACCGACTCCATGC
AAGGTTTGATGGAGATGATGACCAAAGTTATCAGAACTGTACCTGAATTT
TTCTTTGAGGGAACTGAATTTCAAGAAGTGTTGGTTAAACGTGCTTTAGA
GTTAATGACTTTACAAGAGACTCCTACTATTAAGAGTACATGTCACTTTG
TTGTTACGTACCTGGGTGTGGTTTCCGTGTATGATACTGGCAAAGAAGTG
TTTTTGCGATGTGGAAAAGATATTATTGGTCGGGTTTTACTTTGCATTGG
TGTTACTGCTCCTAGATCACTATTAGATAACTACTCAGATGTCTTGTTAG
CTATTAATAAAAACTTTTCAACCGAAAGCTCTGTATGGTTAAATGAGTTG
TTACTCACAGAGAATTTCCCCACTGCTGTACCTACTCAACAACAAAAAGA
GTTGTTCCGTAAAATGGTGATTAAAGAACGGTCAAGTAAGAACCGACTTC
GAGAAACTGTTAGAAATTTTGCTTTATTATGTCGTGGTTTGATGGGACTG
ACTTATGTTCAATGAGACATTACCCATCTGACGAAACATGTAGTAGATTG
ACGTTAACTTTTTGGTATCATCTACAAGATGATTTAGTGGATGTCACAGT
GACTGATTTTCAAAAACAGTTCCAAGATGCTTTTCTAATGTTGGTTGATG
TGTATTTTGTTAAAGGACAGTACCCACCTGATGAGGTATACAATAAATAC
ACTAGCGAAGAGAAAGAACTTTTTCGTTGTTATCGTATTGACATTCAAGA
CACTATCATGTATTTACATCACACGTTGAGAGATCGCTGTTTATCTTATT
TCATTGAAAAATTATCCAGCCTGTTATCATATGAACGTGTTAGCTGATAC
TGAAATAGCGATTCAAACATTTTATCATTCACAAGTCGAAGAACAACGCA
ATGAAGCACACAGATGGCTGCTTGAGCTTCAAAAGTCACCACAGGCATGG
CAAGTCTCATTATTATTGTTAGATGCAACAAAACCAACAGAATGTCAATA
TTATGGTGCAGTTATATTACACTACAAGATTTGTCATATGATGACAGAAG
TTGGTGAAAAAGAAGTACAAGATTTAAAAAACAAGCTGGTTTTATTGATA
TCTTCAGCTTGCTCAGGTGCAAAGTTTGTTAGGACTAAATTATGCTCAAT
ATTTGCAGTCTTGGTTTTACAAACCATGCAAGAGTCTGAGACATTGCTGA
CTTGTATCACCCAAGTCAGCTCTCATTTTCAGAATGTTAGTCCTCAACAA
TCAAAAGAAGTTATTTTACAAATATTGATTGAATTCCCATCACAATTTAA
AAACCTGAACATGGATTCAAGTAAAAGATTGAAAGCAAGAGATTTTATGG
TTCAATTTGCAGAACCACTGTTATCAATGTGGAATGAAATTTTAGCTGCT
GGGCAATCAACGTGGCAACAATATGAATCGGTGCTCTATCTTCTATCTGG
TACAACGGGCACTATAGACAGCGAGGATAAAGTCTACATGCCGAACATCA
TACAACTTCTTAAAAAAGTACCAAACCATCCGAAGATTCATGATACCCTG
TACACTTTCCTGGGCGGTCTTGGAGAATGGTTAATTTACAATCAAAACCA
CATCGAAGATTTGCTACCGTTTCTGTTGTCTGGTATGAACGAATCTAACA
ACCAAATCATGAGCTCTTGCAGTTTGTCTTTGCAAGATATTTGTCAAGAA
TGTGCTCAATTACTTAGCCGACAATCTGTTATGAAAGTATTACAAGTCTG
CCGTGATACATTACAACGTCCGAATTGCCCAGCTAAAGTTTGTGTACGTT
TATTTCAAGTGGCCGGATATGTGATATCAGTTCTACCAGCCTCTGAAATA
CGAAACGAACTTGAGATCATGGTTGCACCCTTGCTACATAATTTTAAAAG
CTTGTTGGGAAGTAAAGCTCAAGGACCTGAGGTCGTAGAGCAGATCTGCC
ATTGCTTAAACTGTTTGACAGCTATGTTTAGGTCTTTGGATCCTTTCGAA
GAACAAGCTGTCCATCCCATCTCTATTGTTTATGAGCAATTATTACAAAT
TCTACCTTTAATTAAAGGATACTGTACTGAAGAAATCATCATGCTTGCTG
CTACGGGCTGCGTCTCAAAAGCTGTTGAAATTGTACGAGAAAAGTTGGCA
CCTTTTGTCAATGCGACTTGCCAACTACTTTTTGATTGTTTCAGTGCATG
CCCAATGTGGTGTATAATGAATACAGCTTCCCTAGTTATTGGTATGTTTG
GTTCGGAAGAAATCACTTCACAAGCTATCAAAGAGTTCTTCGTTGCTATT
ACTACCTCATGTTTGACTTTGAACAGTACTGACAACACCGACTCCATGCA
AGGTTTGATGGAGATGATGACCAAAGTTATCAGAACTGTACCTGAATTTT
TCTTTGAGGGAACTGAATTTCAAGAAGTGTTGGTTAAACGTGCTTTAGAG
TTAATGACTTTACAAGAGACTCCTACTATTAAGAGTACATGTCACTTTGT
TGTTACGTACCTGGGTGTGGTTTCCGTGTATGATACTGGCAAAGAAGTGT
TTTTGCGATGTGGAAAAGATATTATTGGTCGGGTTTTACTTTGCATTGGT
GTTACTGCTCCTAGATCACTATTAGATAACTACTCAGATGTCTTGTTAGC
TATTAATAAAAACTTTTCAACCGAAAGCTCTGTATGGTTAAATGAGTTGT
TACTCACAGAGAATTTCCCCACTGCTGTACCTACTCAACAACAAAAAGAG
TTGTTCCGTAAAATGGTGATTAAAGAACGGTCAAGTAAGAACCGACTTCG
AGAAACTGTTAGAAATTTTGCTTTATTATGTCGTGGTTTGATGGGACTGA
CTTATGTTCAATGAGACATTACCCATCTGACGAAACATGTAGTAGATTGA
CGTTAACTTTTTGGTATCATCTACAAGATGATTTAGTGGATGTCACAGTG
ACTGATTTTCAAAAACAGTTCCAAGATGCTTTTCTAATGTTGGTTGATGT
GTATTTTGTTAAAGGACAGTACCCACCTGATGAGGTATACAATAAATACA
CTAGCGAAGAGAAAGAACTTTTTCGTTGTTATCGTATTGACATTCAAGAC
ACTATCATGTATTTACATCACACGTTGAGAGATCGCTGTTTATCTTATTT
CATTGAAAAATTATCCAGCCTGTTATCATATGAACGTGTTAGCTGATACT
GAAATAGCGATTCAAACATTTTATCATTCACAAGTCGAAGAACAACGCAA
TGAAGCACACAGATGGCTGCTTGAGCTTCAAAAGTCACCACAGGCATGGC
AAGTCTCATTATTATTGTTAGATGCAACAAAACCAACAGAATGTCAATAT
TATGGTGCAGTTATATTACACTACAAGATTTGTCATATGATGACAGAAGT
TGGTGAAAAAGAAGTACAAGATTTAAAAAACAAGCTGGTTTTATTGATAT
CTTCAGCTTGCTCAGGTGCAAAGTTTGTTAGGACTAAATTATGCTCAATA
TTTGCAGTCTTGGTTTTACAAACCATGCAAGAGTCTGAGACATTGCTGAC
TTGTATCACCCAAGTCAGCTCTCATTTTCAGAATGTTAGTCCTCAACAAT
CAAAAGAAGTTATTTTACAAATATTGATTGAATTCCCATCACAATTTAAA
AACCTGAACATGGATTCAAGTAAAAGATTGAAAGCAAGAGATTTTATGGT
TCAATTTGCAGAACCACTGTTATCAATGTGGAATGAAATTTTAGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047075-exon-scaffold_120-1575043694:416106..416679 | TCONS_00047075-exon-scaffold_120-1575043694:416106..416679 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1575043694:415380..415694 | TCONS_00047075-exon-scaffold_120-1575043694:415380..415694 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1575043694:412342..414337 | TCONS_00047075-exon-scaffold_120-1575043694:412342..414337 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1510915933:416106..416679 | TCONS_00047075-exon-scaffold_120-1510915933:416106..416679 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1510915933:415380..415694 | TCONS_00047075-exon-scaffold_120-1510915933:415380..415694 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1510915933:412342..414337 | TCONS_00047075-exon-scaffold_120-1510915933:412342..414337 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1491911889:416106..416679 | TCONS_00047075-exon-scaffold_120-1491911889:416106..416679 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1491911889:415380..415694 | TCONS_00047075-exon-scaffold_120-1491911889:415380..415694 | Clytia hemisphaerica | exon |
| TCONS_00047075-exon-scaffold_120-1491911889:412342..414337 | TCONS_00047075-exon-scaffold_120-1491911889:412342..414337 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_120 | supercontig | scaffold_120:412342..416679 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005488 | binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005488 |
binding |
Blast
BLAST of TCONS_00047075 vs. Swiss-Prot (Human)
Match: IPO13 (Importin-13 OS=Homo sapiens GN=IPO13 PE=1 SV=3) HSP 1 Score: 275.018 bits (702), Expect = 1.362e-77 Identity = 179/619 (28.92%), Postives = 309/619 (49.92%), Query Frame = 1
Query: 568 LAGHYPSDETCSRLTLTFWYHLQX---XXXXXXXXXFQKQFQDAFLMLVDVYFVKGQYPPDEVYNKYTSEEKELFRCYRIDIQDTIMYLHHTLRDRCLSYFIEKLSSLLSSGQS--TWQQYESVLYLLSGTTGTIDSEDKVYMPNIIQLLKKVP-NHPKIHDTLYTFLGGLGEWLIYNQNHIEDLLPFLLSGMNESNNQIMSSCSLSLQDICQECAQLLSRQSVMKVLQVCRDTLQRPNCPAKVCVRLFQVAGYVISVLPASEIRNELEIMVAPLLHNFKSLLGSKAQGPEVVEQICHCLNCLTAMFRSLDPFEEQAVH--------PIS--------IVYEQLLQILPLIKGYCTEEIIMLAATGCVSKAVEIVREKLAPFVNATCQLLFDCFSACPMWCIMNTASLVIGMFGSEEITSQAIKEFFVAITTSCLTL---NSTDNTDSMQGLMEMMTKVIRTVPEFFF-EGTEFQEVLVKRALELMTLQETPTIKSTCHFVVTYLGVVSVYDTGKEVFLRCGKDIIGRVLLCIGVTAPRSLLDNYSDVLLAINKNFSTESSVWLNELLLTENFPTAVPTQQQKELFRKMVIKERSSKNRLRETVRNFALLCRGLMGLTY 2346
+ GHYP +ET S LTLTFWY LQD +Q+ ++ + LVDV K Q+P DE Y ++S+EKE FR YR+DI DT+MY++ L LS +KL LL+S + +WQ E++LY TID +P +I L+ ++ ++ ++ DT+ +G L EWL + I +LP +L + N ++ S +L+ IC+EC L + ++ V +D L + C+ L Q G+++S L EI L +++P + + L + P I H L L+ +F +LD + H P+ ++ + I ++ + + ++ A K+V+ + + AP V C++L +S P ++ ++ +F E I+ F+ +T+ LTL D+ D + M+++ + ++ P+ F E + + V + A+ + E PT+K++C F L ++ +V G+ ++ VL IG A RSL+D ++D+L A+NK+ + S+W+ E L FP+A + +QK+ F + +++ER +K R++E V+ F LLCRGL G Y
Sbjct: 346 IPGHYPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALG--NPELSVSSVSTLKKICRECKYDLPPYAA-NIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKL-AEEIPNPSNKLAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVF-QCAVLALKFPEAPTVKASCGFFTELLPRCGEVESVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSMWIKEALQPPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGTDY 959
The following BLAST results are available for this feature:
|
