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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047613 ID=TCONS_00047613|Name=TCONS_00047613|organism=Clytia hemisphaerica|type=transcript|length=1007bp
CGTGAACTTAGAGAAATTGAAGAAGCTCACAACAAAATGAAACTTCAATT
GGAAATTAAGAAATCTGAGGCAAGAATGTCAGTTTACCAACAAAACCAAG
ATGAAGAAGGCAAGCTTAGCGAGTTCGACGAAATTACCAATAAGCTGCCA
GTCGACGAATCGTACACTATGAACTACATAGAAAGGTTGCAATCATCCAT
ACACGACGAAAAGTGTAGCGTCAACAAGGCAACTAAAAACATTAGTGATA
ATGATCAAGTTAATTTACAATCCAGCGATCAAAGCAAAAGTCATCATCAC
AGATTCAAATCAGTTGACGAGCCTTTCAAAGACAAACTCAAAGAAGCGGG
ACCATCAGTCAAATTCCAAGTTGTAGAGGCAAGTCATACAGAGGAAATGA
CAAAGTTGGTAAAACTAGCCAGAGCACCTGCAGTTAAAATTGACTCTTTT
AATGGAAATCCAGTCGATTTTCCATACTTCATAGCGAATTTTACTCAAGC
AGTTGACGAAAACGTTCCAGACGAACGAGGCAAGTTAACCAGGCTGATTG
ATTGTAACAGAGGGGAACCTCATGAGTTGGTCAAGTCGTGTGTTTACCTA
GACGACAAAGATTGTTATCAACAAGCAAAGGAGTTATTGAAGAAGAAGTA
TGGCAGTCCACATACGATAGCAAGTGAATACAGAAANGAGTTGGTCAAGT
CGTGTGTTTACCTAGACGACAAAGATTGTTATCAACAAGCAAAGGAGTTA
TTGAAGAAGAAGTATGGCAGTCCACATACGATAGCAAGTGAATACAGAAA
ACAGTTAGTGTTATGGCCAAAGCTAAAGGCTAATGACACACAAGCATTCG
ACAGATTCGAAAACTATTTGATCAAGTATCAAGCTTCGATGCGAGCAATT
GGCAAGAAGAGTCAGTGCAACTTAGAACTGATTCAACTACTTCAAAGCAA
GATGCCACCATTCCTACAAGAGAGATGGAACAGAAAAGTCTATCAGTCGA
GAAGGCA Run BLAST on NCBI protein sequence of TCONS_00047613-protein >TCONS_00047613-protein ID=TCONS_00047613-protein|Name=TCONS_00047613-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
RELREIEEAHNKMKLQLEIKKSEARMSVYQQNQDEEGKLSEFDEITNKLP
VDESYTMNYIERLQSSIHDEKCSVNKATKNISDNDQVNLQSSDQSKSHHH
RFKSVDEPFKDKLKEAGPSVKFQVVEASHTEEMTKLVKLARAPAVKIDSF
NGNPVDFPYFIANFTQAVDENVPDERGKLTRLIDCNRGEPHELVKSCVYL
DDKDCYQQAKELLKKKYGSPHTIASEYRXELVKSCVYLDDKDCYQQAKEL
LKKKYGSPHTIASEYRKQLVLWPKLKANDTQAFDRFENYLIKYQASMRAI
GKKSQCNLELIQLLQSKMPPFLQERWNRKVYQSRR Run BLAST on NCBI transcript from alignment at scaffold_132:212885..213891 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047613 ID=TCONS_00047613|Name=TCONS_00047613|organism=Clytia hemisphaerica|type=transcript|length=1007bp|location=Sequence derived from alignment at scaffold_132:212885..213891 (Clytia hemisphaerica)
TGCCTTCTCGACTGATAGACTTTTCTGTTCCATCTCTCTTGTAGGAATGG
TGGCATCTTGCTTTGAAGTAGTTGAATCAGTTCTAAGTTGCACTGACTCT
TCTTGCCAATTGCTCGCATCGAAGCTTGATACTTGATCAAATAGTTTTCG
AATCTGTCGAATGCTTGTGTGTCATTAGCCTTTAGCTTTGGCCATAACAC
TAACTGTTTTCTGTATTCACTTGCTATCGTATGTGGACTGCCATACTTCT
TCTTCAATAACTCCTTTGCTTGTTGATAACAATCTTTGTCGTCTAGGTAA
ACACACGACTTGACCAACTCNTTTCTGTATTCACTTGCTATCGTATGTGG
ACTGCCATACTTCTTCTTCAATAACTCCTTTGCTTGTTGATAACAATCTT
TGTCGTCTAGGTAAACACACGACTTGACCAACTCATGAGGTTCCCCTCTG
TTACAATCAATCAGCCTGGTTAACTTGCCTCGTTCGTCTGGAACGTTTTC
GTCAACTGCTTGAGTAAAATTCGCTATGAAGTATGGAAAATCGACTGGAT
TTCCATTAAAAGAGTCAATTTTAACTGCAGGTGCTCTGGCTAGTTTTACC
AACTTTGTCATTTCCTCTGTATGACTTGCCTCTACAACTTGGAATTTGAC
TGATGGTCCCGCTTCTTTGAGTTTGTCTTTGAAAGGCTCGTCAACTGATT
TGAATCTGTGATGATGACTTTTGCTTTGATCGCTGGATTGTAAATTAACT
TGATCATTATCACTAATGTTTTTAGTTGCCTTGTTGACGCTACACTTTTC
GTCGTGTATGGATGATTGCAACCTTTCTATGTAGTTCATAGTGTACGATT
CGTCGACTGGCAGCTTATTGGTAATTTCGTCGAACTCGCTAAGCTTGCCT
TCTTCATCTTGGTTTTGTTGGTAAACTGACATTCTTGCCTCAGATTTCTT
AATTTCCAATTGAAGTTTCATTTTGTTGTGAGCTTCTTCAATTTCTCTAA
GTTCACG Coding sequence (CDS) from alignment at scaffold_132:212885..213891 >TCONS_00047613 ID=TCONS_00047613|Name=TCONS_00047613|organism=Clytia hemisphaerica|type=CDS|length=1005bp|location=Sequence derived from alignment at scaffold_132:212885..213891 (Clytia hemisphaerica)
CCTTCTCGACTGATAGACTTTTCTGTTCCATCTCTCTTGTAGGAATGGTG
GCATCTTGCTTTGAAGTAGTTGAATCAGTTCTAAGTTGCACTGACTCTTC
TTGCCAATTGCTCGCATCGAAGCTTGATACTTGATCAAATAGTTTTCGAA
TCTGTCGAATGCTTGTGTGTCATTAGCCTTTAGCTTTGGCCATAACACTA
ACTGTTTTCTGTATTCACTTGCTATCGTATGTGGACTGCCATACTTCTTC
TTCAATAACTCCTTTGCTTGTTGATAACAATCTTTGTCGTCTAGGTAAAC
ACACGACTTGACCAACTCNTTTCTGTATTCACTTGCTATCGTATGTGGAC
TGCCATACTTCTTCTTCAATAACTCCTTTGCTTGTTGATAACAATCTTTG
TCGTCTAGGTAAACACACGACTTGACCAACTCATGAGGTTCCCCTCTGTT
ACAATCAATCAGCCTGGTTAACTTGCCTCGTTCGTCTGGAACGTTTTCGT
CAACTGCTTGAGTAAAATTCGCTATGAAGTATGGAAAATCGACTGGATTT
CCATTAAAAGAGTCAATTTTAACTGCAGGTGCTCTGGCTAGTTTTACCAA
CTTTGTCATTTCCTCTGTATGACTTGCCTCTACAACTTGGAATTTGACTG
ATGGTCCCGCTTCTTTGAGTTTGTCTTTGAAAGGCTCGTCAACTGATTTG
AATCTGTGATGATGACTTTTGCTTTGATCGCTGGATTGTAAATTAACTTG
ATCATTATCACTAATGTTTTTAGTTGCCTTGTTGACGCTACACTTTTCGT
CGTGTATGGATGATTGCAACCTTTCTATGTAGTTCATAGTGTACGATTCG
TCGACTGGCAGCTTATTGGTAATTTCGTCGAACTCGCTAAGCTTGCCTTC
TTCATCTTGGTTTTGTTGGTAAACTGACATTCTTGCCTCAGATTTCTTAA
TTTCCAATTGAAGTTTCATTTTGTTGTGAGCTTCTTCAATTTCTCTAAGT
TCACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047613-exon-scaffold_132-1491911889:212885..213891 | TCONS_00047613-exon-scaffold_132-1491911889:212885..213891 | Clytia hemisphaerica | exon |
| TCONS_00047613-exon-scaffold_132-1510915933:212885..213891 | TCONS_00047613-exon-scaffold_132-1510915933:212885..213891 | Clytia hemisphaerica | exon |
| TCONS_00047613-exon-scaffold_132-1575043694:212885..213891 | TCONS_00047613-exon-scaffold_132-1575043694:212885..213891 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_132 | supercontig | scaffold_132:212885..213891 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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