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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047648 ID=TCONS_00047648|Name=TCONS_00047648|organism=Clytia hemisphaerica|type=transcript|length=2870bp CAGAAAACAACACACACGTAAAAACATGAATATTTAATATATGTTATAAG AAATGGGTTTGGAAGCTGGCcggaaaaacacgaaaaatgcaTTGAAAGGC AACGTGTCAAAACAAGAAAAGaagcaGCCGGATCCAAAAGATCTTCTACC CGTTTCATTGCTCTGTGGCTTTCTGGGAGCGGGTAAAACAACCCTCCTTA AGCACATCTTGGAGACCAAACACAATGAAGAGGGCTTTAGATGTGCTGTT ATCGTCAATGATATGGCAACTCTGAATATTGACAAAAGTTTGATCGATCA GTCAGCCCTTGTTCAAAGTGACGAAGTCATTGCAATGCAAAATGGTTGTT TTTGCTGCACTCTTCAAAGTGATCTTGTGGATCAGATTGTGTCTTTGGCA TCAAAGAATATATTTGATTACATGTTGATCGAGGCATCAGGAGTTTCGGA ACCTGCACAAATTGCTCCACTTTTCGATCTTTGTGAAGATGAGCATGACC ATGAAGAGGAACATCCAGAAGGACCAGAGCTGGGTGAAGTTGCAAGGCTT GATACATGTGTTACTGTTATTGATGCAGCTGAATTTTACAATAATCTTGA AAGTATGAAAATGTACGAGGATGGGGACATGGTTGGAACAATATCAGAAT TGCTGATGGAACAAGTGGAATATTCCAATGTTGTTATTCTCAATAAACAA GACTTGGTCAACGAACATCAAAAAGCTGACATCATGGCTAAGATAAAGTT ATTGAATCCAAGAGCAAAGATTTTGACCACATTTCAAAGCACGATTGATG TGAGAGAGATTttgaatactaatttgtatagCAAAGAGGCCATGGACGAG GATGCAGTCATTTGTTCTGCAACAAGgCAGGGTGATTCAGAAGATGACAT CTACTTACCAGAATGTTGCGTTAAATCTGTTGAATCTGGCAAAAAGAAAT GttgtaaaagtaaaaacgcTGAGAACAAGCAAATCGTTGATTCTGGAAAA TCACAACTATTTCTTGGAGTGGTGGACAAAATTTCTGGCAAAAAGCAATT GACCAGGCATGAAAAACGCTTTGGAATATCTTCCTTTGTTTATCGGTCAA GAAGGCCTTTTCATCCGGGGCGGTTTAATGAATTATTCTTAGAACCTTTC TTTATAATGAGAttcgaagaagaaaataacGAACTTGATCAACTTCAGAA AAGAGCAGCTGAGAAACAAAAAATACGAACGAAAAGCATTGGTGAATTAT TACGAGCAAAAGGATTTTTATGGATCGCTTCTTCACATGAAGTTCTGGGT GGCTTTCAGCAAGCTGGCAATGTCGTCAGGGTTGAGGAAGAAGGTCCATG GATGGTACATCCTGAATGTCGTGACAAATGGGAAGGAACAGATACGGAAG AGAGAGTTCTGAAAGATATGACAAACGAGAAGGGTGAAGAATATGAATAC GGCGATCGCCGTCAAGAATTAGTTTTCATCGGAATGACTTTGAAATATGA AACCATACAAAAAATATTAGATGAATGTCTTTTGACTGACGATGAAATGA AGTTGGGACCGGAGAAATGGTTTGAGACTATGGAGAGTGAGGATAAATTG AAACTAAGTTTGGATGTCTCTGATGATGAAGACGAAGATTACGAAGATGA AAATGGGGAACAAGACGATATCAACGAGGGGGGTGAAAGCGATCCTGAAA ACGATGATGAAAAGGAAGAACCGAAAGAGATGGGAAAAGTGGTCAATAAC AAACGAAAAGGTGATGATGTTAAAGAAGAACAAAGACCTGAAAACAAAAA GactaaaaagaaataaaaacaaaattactATTGCACGTAGATTTTGACTt ccaattttatattttttgaatcaaATAATGGATCAACTCATACTACCTAA TCTTTCTTGATATGATAAAGTCTGTTTGGCCTCATATCTCATGACCTGGG CCTAGTCCTTTTTTGAACCTActccggtggaggtcctttaaattaacctg tttccttccgtccgtccgtccatcTGATGcaagcttttctcaggattggc tcattcgATCTTTCTGATTTTCTTGCACAAGGATGCAAAAttgtaatgcc caaaatgtgacggagcccgtttttcgaaaaatatattaatATACCGAAAA AACCGGGTTTTTTGGCTATATTTATCATTAGGTAGGTTCAATATACATTG TGcttgttctttttattttaatcaaaCGCTAACCTAATGGATTTGTGGTC TTATACTACCTTGTATACTAcatgcggttttgtagaggtctacAATTCAG ACTAACGCTAGCCCAGCCTCTCGGACATATATGAATACTAAAAGAgtttt tgagagaatttttgGCATACCACCACCCCACCCCAGTTTAAGTGGTGtct tagtacacatgtacttaAATTTTTGGGGACATTTTGACACATATACCGCC CAATTTTAGTCTTTTCTGGACAATTTTTGTCTTCTCGGGACCATTTTGCT CAAAAGTGATGATTTTGCAacataaaattcaatttttgctcaaatttata taattatagactaaatttaggctatttagagcaaaataagggaccttctc ttaAGTTCATAAGGTCTGGCGGgttgaaaaattgtcaaaaaatgaacaag cgggggggcgtttaattggaacctaagagtatatcTTTTCGATCTTTTAA TCTATTATACAATAACATAGTTCAATAGGAAAGGTATTGTTATGTTTTTT GAAGTTGCTACCCATATATAGTATATACATATTAGGCATACTGTATTACG CTTGTCATGCTTATTATGAACCAGACGCCTATATTAGGCGTAAAATAGAA ACTCTAAACGAATCATGTCA Run BLAST on NCBI transcript from alignment at scaffold_133:314650..322394+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047648 ID=TCONS_00047648|Name=TCONS_00047648|organism=Clytia hemisphaerica|type=transcript|length=7745bp|location=Sequence derived from alignment at scaffold_133:314650..322394+ (Clytia hemisphaerica) CAGAAAACAACACACACGTAAAAACATGAATATTTAATATATGTTATAAG
AAATGGGTTTGGAAGCTGGCcggaaaaacacgaaaaatgcaTTGAAAGGC
AACGTGTCAAAACAAGAAAAGGTAATGTGAGCAAAAAAGGCTATTATCTT
CCTATACTTTCTTTCTGATCAAATCAATGCTTTTAAAGGCCGGATTCCAC
TTGCGTGCGCTGCGAgggcactttttcgagcaaagcttccatgctattgg
tcaaaagaaaaatgaagcgatTCCATTGGcacgatctgacgtaacggttg
aaaaaagttgaaatgtattcAACTTGTTTTTCGAGCGCACGCTACAtttt
aatgacgtaatctttttccaAGCAAATAGAATCGAAGCCAAACGGTGCGA
TCGTAGCGCGCCCAAGTGGAGACCGTCCTTAAGAATATCGTGCTAAAAAA
CcccaaattttagaaattcgaATCAGAATATAGCTTCAGCATAATAGTGT
TATTAGATTTCACCAGGGATATCGAGTCTGATCGGAGTTTCAACCGAATT
TAATCCTTCCTTAATAAAGGAGCGAATGCAAAAAAATATCTGATTGTCAT
TCGTCGtccacatgactaaaggttcaatctcaaaataagtgccttagaaa
attgaaattttttagatTCTGTTCTGTTTTATGATTGGCTTTTTTGTCAT
TGGAAAACATTGAATATTCCTCTGTAAGACAAATGAAGAATCCCAATGTC
AAAGGTGAACACCAcagtaaaattttgagttttgtaaGGTACatactaat
tttgagattgagcCTTGAGTCACGCGAGTGATAAATTTTATAACtccttt
tcatttttagaagcaGCCGGATCCAAAAGATCTTCTACCCNAGGCCGGAT
TCCACTTGCGTGCGCTGCGAgggcactttttcgagcaaagcttccatgct
attggtcaaaagaaaaatgaagcgatTCCATTgacgcgatctgacgtaac
ggttgaaaaaagttgaaatgtattcAACTTGTTTTTCGAGCGCACGCTAC
AttttaatgacgtaatctttttccaAGCAAATAGAATCGAAGCCAAACGG
TGCGATCGTAGCGCGCCCAAGTGGAGACCGTCCTTAAGAATATCGTGCTA
AAAAACcccaaattttagaaattcgaATCAGAATATAGCTTCAGCATAAT
AGTGTTATTAGATTTCACCAGGGATATCGAGTCTGATCGGAGTTTCAACC
GAATTTAATCCTTCCTTAATAAAGGAGCGAATGCAAAAAAATATCTGATT
GTCATTCGTCGtccacatgactaaaggttcaatctcaaaataagtgcctt
agaaaattgaaattttttagatTCTGTTCTGTTTTATGATTGGCTTTTTT
GTCATTGGAAAACATTGAATATTCCTCTGTAAGACAAATGAAGAATCCCA
ATGTCAAAGGTGAACACCAcagtaaaattttgagttttgtaaGGTACata
ctaattttgagattgagcCTTGAGTCACGCGAGTGATAAATTTTATAACt
ccttttcatttttagaagcaGCCGGATCCAAAAGATCTTCTACCCGTTTC
ATTGCTCTGTGGCTTTCTGGGAGCGGGTAAAACAACCCTCCTTAAGCACA
TCTTGGAGACCAAACACAATGAAGAGGGCTTTAGATGTGCTGTTATCGTC
AATGATATGGCAACTCTGAATATTGACAAAAGTTTGATCGATCAGTCAGC
CCTTGTTCAAAGTGACGAAGTCATTGCAATGCAAAATGGTTGTTTTTGCT
GCACTCTTCAAAGTGATCTTGTGGATCAGATTGTGTCTTTGGCATCAAAG
AATATATTTGATTACATGTTGATCGAGGCATCAGGAGTTTCGGAACCTGC
ACAAATTGCTCCACTTTTCGATCTTTGTGAAGATGAGCATGACCATGAAG
AGGAACATCCAGAAGGACCAGAGCTGGGTGAAGTTGCAAGGCTTGATACA
TGTGTTACTGTTATTGATGCAGCTGAATTTTACAATAATCTTGAAAGTAT
GAAAATGTACGAGGATGGGGACATGGTTGGTAAGAATGATATTTTTATAT
TCATACACTATGATACTTGTGACATGAATAGCATAGCTCAAACTCCTTTC
TTTAAGGGGTCATGACCACTGAGCTTTACATAAATCTGAAGtaaaataga
aaacaacatGGTGGACTAGTCGACTTCAAAACTGGGCACACTttcatagg
ccatttcacagtcgcaaagcgtaatgggtaatcaggaccactgcgcgcta
ataacgacttactattggtccaaagttttgaaaaaaattttcaagaaaaa
gatttttgcgtctagccaacgggaagccgtaatggaggcgcaatcagtcc
tgattacccatgatccatttcgactgtgaaatggcctatgggAAATCTGT
GAGAAATTACAATTAGCCTTTCTAGTATGTAAAAGAATATGTGTATCTGT
CCTTTCAAAACAACGCCGAACNaccctggaggacactatgtctAGTATGT
AAAAGAATATGTGTACCTGTGCTTTCAAAACAACGCCGAACAAAGGTGGT
GAATATAGCTTTGTCCAGAGTTTACAAAGGTCAATGGCCAAATGACACCT
CTGAAAATCCGAAGAAGAGGATGGGTTGGgatattttcctgaaaaaggTG
GTACTTAGATAGGATTTTCGGGTCACGCTCACGATATCCTGTGTCGTCgt
ttttttaaaggaaatctTGCTCTATTAGCAGTCAATTGCAAGACCGAATC
TTgctggaattttttaaagattttgccAACAAAGTTTTTGTCGTGTATAA
AGCGCTTAACAAATCAATAGAGGAATCGCCGTTTATGTGATAGTGATATG
ATTTTCTCCATTATGGAAAAATATTCGATTCGCATATATCACTGGTAAGT
CATTGGAAGGTTTTCTGTCAACTTTACTCCCAATGTAATATTTCTTATAA
CATTCTTAATTTTCTAGGAACAATATCAGAATTGCTGATGGAACAAGTGG
AATATTCCAATGTTGTTATTCTCAATAAACAAGACTTGGTCAACGAACAT
CAAAAAGCTGACATCATGGCTAAGATAAAGTTATTGAATCCAAGAGCAAA
GATTTTGACCACATTTCAAAGCACGATTGATGTGAGAGAGATTttgaata
ctaatttgtatagCAAAGAGGCCATGGACGAGGATGCAGTCATTTGTTCT
GCAACAAGGTATATAGTTGATTTAGATTTACCAACAGTTTGtctctcacg
tttatcgctacgtagtacactctgtgcacaTTGTGCactctgtttgataa
aaaaattgcgatgaagtatgatttacaAATAGCAACACgtctctcatcgt
ctcccctctcccGCCAAcgctccatcgcagcggtcggtttgaaaaatctc
aaatgaaaaaagacaatgacaacagaccctttacggcaatgaaatttgaa
ataagccgtagatactgcgtttgtgtacagacaagcaGTTTGTATGATGG
CGTGAAATCTGAAAAACTTGATGTGACAGCGTAAATTTTTGGTCTGCTGA
AAGGGCAACATGAAGTGACCCGTATAAGCCTAGCTGTGGCACAAAATGCA
AAAGCAACCTTTATTTCtaacattcaaaacaaaacgTTCATATGAGGTTT
GATGATTATTGAAACAAAGTTGTGTGCCAACTTGGAGAGTTATATTGTGT
TTTCTATCTTAAAAAATGGAATTAGCGCCGGATTGCCctgtttttcaaag
attttcgaaGTTTACAAGTGTAAAGctataatattatttttcttacaaaa
attgcTTTTTCACTAGCACCAAcgttactttttgttttacaaaCTCAATT
TTAAATACAGTTTCttcccactgacctttatataccctggaccaagtttc
tcaatcttggccaagcaaaatctttgatcggagttttttgaaaagtggta
ccctaatggcggcacttctcaatagcggtgtaaatgcattgagggcgcta
gatctactttacctcgaaaacttttgatgatgtagcgccatTAGACgttt
tttaacactgcaatggattctttacgggtaccaattcaaaaaaaacttcg
atcaaagatggcagatatagcttggtccagggattataaaggtcagtgtt
tcTTCCACTGAAAAACAGTTGTgaaaaaaagcttgaaaatttcCGTTCAA
AACACCATGGAATATAGAGAGtatattttatttaattctattgtttttag
gCAGGGTGATTCAGAAGATGACATCTACTTACCAGAATGTTGCGTTAAAT
CTGTTGAATCTGGCAAAAAGAAATGttgtaaaagtaaaaacgcTGAGAAC
AAGCAAATCGTTGATTCTGGAAAATCACAACTATTTCTTGGAGTGGTGGA
CAAAATTTCTGGCAAAAAGCAATTGACCAGGCATGAAAAACGCTTTGGAA
TATCTTCCTTTGTTTATCGGTCAAGAAGGCCTTTTCATCCGGGGCGGTTT
AATGAATTATTCTTAGAACCTTTCTTTATAATGAGAttcgaagaagaaaa
taacGAACTTGATCAACTTCAGAAAAGAGCAGCTGAGAAACAAAAAATAC
GAACGAAAAGCATTGGTGAATTATTACGAGCAAAAGGATTTTTATGGATC
GCTTCTTCACATGAAGTTCTGGGTGGCTTTCAGCAAGCTGGCAATGTCGT
CAGGTAAATTTTGATCTTAAAATTATGTTTAGATATAATCTTTAGCTAGA
GGTCATCGATATAGTAAGTACGCCAAAATTTCCGAATATTTGACGTCCCC
TCCCCCATCCTCATAGAAACGATGCGATTCGAACAATAATTTATGCTTTT
CTAAACCCCCCCCCTTCACTGCTCACGCTTTATATAGATGATCCCCTAGA
CTGATCTAAATCTGCGAATATGAGAATTCAATTTGCTTGCATTCCAACCA
TCCGTCtcatttggcttaaaaaacaatagaaatcaaattatgggaaaatg
ttaagttttgagattcaaAAACTTGGCACGAGGTGAATTATAAGCATTAT
AATTcatcataagcatataataagcatagtCTATGCCTTGATGCTTTTGA
AAGCTTAAACCTACACGAGCGTGAccaaggggcagacacttgcttataaa
aagaagtaTGTATTGTCAGTGAAGATGGACATTTGTTCAAGGACTCTTAC
ATCATTTGTGAATTGTTTTATTATAGGGTTGAGGAAGAAGGTCCATGGAT
GGTACATCCTGAATGTCGTGACAAATGGGAAGGAACAGATACGGAAGAGA
GAGTTCTGAAAGATATGACAAACGAGAAGGGTGAAGAATATGAATACGGC
GATCGCCGTCAAGAATTAGTTTTCATCGGAATGACTTTGAAATATGAAAC
CATACAAAAAATATTAGATGAATGTCTTTTGACTGACGATGAAATGAAGT
TGGGACCGGAGAAATGGTTTGAGACTATGGAGAGTGAGGATAAATTGAAA
CTAAGTTTGGATGTCTCTGATGATGAAGACGAAGATTACGAAGATGAAAA
TGGGGAACAAGACGATATCAACGAGGGGGGTGAAAGGTAAgatatttttg
ttcttttgttacATAATTCGTAGAGAGCACCTAACCGAAAACCGgaattt
ttcatctcgtttcttggTGACTTTAGCCTTTACTTTCGATACTCCTGTAG
TAGCTAAAAAATCGAATTtacgtcaaagcacttgaaagtcttctattttt
cagaaatcgtcaaagtggaacttaccaaaaaacgagatgaaaaatcccag
tttttggtgaggtgctcgctatggAAAACCTGGGTTCCCAACAatgcggg
tgacgtctagtataggctacataacttttatctgatattccgacggtgta
ttggcggccgcccacgctaaagctctgaaggagcgggccaatttaccatc
ggagacctatagtagtcatcgtttgatgtaccgcatcacagtCNGAGTTA
AAGAGACACCACGCCATCCTTTACGCCTACATCAGTATATCATTGTTCAA
ACCTTCGTGCGCGGCTAGACAATTATTATTCGCCGGTTTATCCGAAAAAA
TAGCGTGCTTGATTGCTTCTCACTCGGTAACATTTAGCTACTAGCGTACA
TAATTCACATTCACATTATGGTTTCTTCTCCTTAAAGGACATCATTTCAA
CGCATCTCTTCCCATTTGCTTGCACTACAGCATCTTTAAACGAAAATAAA
CAACTCCCGCCCCACGCGAGcacaaaatgctgaaaattctttaaattatt
ctgctttgtcagcactAGAAGCGCCTCTTTTCTATATCAAAGTAAGAATA
TATACGTACAGTACGCAGCGCTGatgagtcctaataaggacgaaatacAT
ATGCTgttctgccacccaaatctcctgagtgaatatagttcaCATATTAT
GTCTGAAAAGAAATGTATTTATCTGTCTACGTTTAATATATGTTTTTTTA
CTTCCTTTAAAAAGCGATCCTGAAAACGATGATGAAAAGGAAGAACCGAA
AGAGATGGGAAAAGTGGTCAATAACAAACGAAAAGGTGATGATGTTAAAG
AAGAACAAAGACCTGAAAACAAAAAGactaaaaagaaataaaaacaaaat
tactATTGCACGTAGATTTTGACTtccaattttatattttttgaatcaaA
TAATGGATCAACTCATACTACCTAATCTTTCTTGATATGATAAAGTCTGT
TTGGCCTCATATCTCATGACCTGGGCCTAGTCCTTTTTTGAACCTActcc
ggtggaggtcctttaaattaacctgtttccttccgtccgtccgtccatcT
GATGcaagcttttctcaggattggctcattcgATCTTTCTGATTTTCTTG
CACAAGGATGCAAAAttgtaatgcccaaaatgtgacggagcccgtttttc
gaaaaatatattaatATACCGAAAAAACCGGGTTTTTTGGCTATATTTAT
CATTAGGTAGGTTCAATATACATTGTGcttgttctttttattttaatcaa
aCGCTAACCTAATGGATTTGTGGTCTTATACTACCTTGTATACTAcatgc
ggttttgtagaggtctacAATTCAGACTAACGCTAGCCCAGCCTCTCGGA
CATATATGAATACTAAAAGAgtttttgagagaatttttgGCATACCACCA
CCCCACCCCAGTTTAAGTGGTGtcttagtacacatgtacttaAATTTTTG
GGGACATTTTGACACATATACCGCCCAATTTTAGTCTTTTCTGGACAATT
TTTGTCTTCTCGGGACCATTTTGCTCAAAAGTGATGATTTTGCAacataa
aattcaatttttgctcaaatttatataattatagactaaatttaggctat
ttagagcaaaataagggaccttctcttaAGTTCATAAGGTCTGGCGGgtt
gaaaaattgtcaaaaaatgaacaagcgggggggcgtttaattggaaccta
agagtatatcTTTTCGATCTTTTAATCTATTATACAATAACATAGTTCAA
TAGGAAAGGTATTGTTATGTTTTTTGAAGTTGCTACCCATATATAGTATA
TACATATTAGGCATACTGTATTACGCTTGTCATGCTTATTATGAACCAGA
CGCCTATATTAGGCGTAAAATAGAAACTCTAAACGAATCATGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00047648-exon-scaffold_133-1491911889:314650..314770 | TCONS_00047648-exon-scaffold_133-1491911889:314650..314770 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1510915933:314650..314770 | TCONS_00047648-exon-scaffold_133-1510915933:314650..314770 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1575043694:314650..314770 | TCONS_00047648-exon-scaffold_133-1575043694:314650..314770 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1491911889:316215..316728 | TCONS_00047648-exon-scaffold_133-1491911889:316215..316728 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1510915933:316215..316728 | TCONS_00047648-exon-scaffold_133-1510915933:316215..316728 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1575043694:316215..316728 | TCONS_00047648-exon-scaffold_133-1575043694:316215..316728 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1491911889:317667..317907 | TCONS_00047648-exon-scaffold_133-1491911889:317667..317907 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1510915933:317667..317907 | TCONS_00047648-exon-scaffold_133-1510915933:317667..317907 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1575043694:317667..317907 | TCONS_00047648-exon-scaffold_133-1575043694:317667..317907 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1491911889:318950..319402 | TCONS_00047648-exon-scaffold_133-1491911889:318950..319402 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1510915933:318950..319402 | TCONS_00047648-exon-scaffold_133-1510915933:318950..319402 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1575043694:318950..319402 | TCONS_00047648-exon-scaffold_133-1575043694:318950..319402 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1491911889:319926..320285 | TCONS_00047648-exon-scaffold_133-1491911889:319926..320285 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1510915933:319926..320285 | TCONS_00047648-exon-scaffold_133-1510915933:319926..320285 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1575043694:319926..320285 | TCONS_00047648-exon-scaffold_133-1575043694:319926..320285 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1491911889:321214..322394 | TCONS_00047648-exon-scaffold_133-1491911889:321214..322394 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1510915933:321214..322394 | TCONS_00047648-exon-scaffold_133-1510915933:321214..322394 | Clytia hemisphaerica | exon |
TCONS_00047648-exon-scaffold_133-1575043694:321214..322394 | TCONS_00047648-exon-scaffold_133-1575043694:321214..322394 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_133 | supercontig | scaffold_133:314650..322394 + |
Blast
BLAST of TCONS_00047648 vs. Swiss-Prot (Human)
Match: CBWD2 (COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.661e-21 Identity = 67/230 (29.13%), Postives = 123/230 (53.48%), Query Frame = 2
Query: 146 LPVSLLCGFLGAGKTTLLKHILETKHNEEGFRCAVIVNDMATLN-IDKSLIDQSALVQSDEVIAMQNGCFCCTLQSDLVDQIVSLAS-KNIFDYMLIEASGVSEPAQIAPLFDLCXXXXXXXXXXXXXXXXXXVARLDTCVTVIDAAEFYNNLESMKMYEDGDMVGTISELLMEQVEYSNVVILNKQDLVNEHQKADIMAKIKLLNPRAKILTTFQSTIDVREILNTNLY 829
+PV+++ G+LGAGKTTLL +IL +H++ R AVI+N+ + ++KSL +E + ++NGC CC+++ + + I +L K FDY+L+E +G+++P +A +F + + LD +T++D+ +L K G I+E QV ++ +++NK DLV E + A I+ +N +IL T +S +D+ +L+ + +
Sbjct: 42 IPVTIITGYLGAGKTTLLNYILTEQHSK---RVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDNGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSD-------------IYLDGIITIVDSKYGLKHLAEEKPD------GLINE-ATRQVALADAILINKTDLVPEEDVKKLRATIRSINGLGQILETQRSRVDLSNVLDLHAF 248
The following BLAST results are available for this feature:
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