TCONS_00049307 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049307
Unique NameTCONS_00049307
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1182

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049307 ID=TCONS_00049307|Name=TCONS_00049307|organism=Clytia hemisphaerica|type=transcript|length=1182bp
GGAAAAGGGGGAtttgaagATAAACTATAAAAATGAATCGAGCTCAATTA
TCCTGGGTGAACCATGAGCATATAGccCCGAAGATTGAAAAAGATATTCC
ATCCTATGCTGAGGAAAAAACTGAAGAAACTAAACCGTCACCTCCTTCAT
ATCTTGAGAGAATTTTATCCATGACTGCTGACATTGAGGAGATAAAACAA
CCTGAAGATGACGGGCAAGAAACGACAAGCGTTGGTGTATCAACCGAGGA
ATATCATGGAGATAATAAAGATATGACACCACCTGATTTGAAAGTTATGG
AGATCAATGAAGAGGGAATTGAACCAGAGGATGAACACTCAGAGATTTTA
AGACAAGCGAAATTTGAATGGCTGATTCCAAAAGATTTCGGAACCTTTCA
GGTTGTACATTACGATCGGCCAACCGTTCCCGACCCATTCAACGACATTA
TTCAAAGCGTCATGGAGGAAAACTCGTCAAACAAAAACCGGCTTTCGGTT
AACCAATCAAAACGAGCTACACCTAAATCTCCACGCACGCCTCGGACACC
TTTATCCGCGCGTTCAACTACAAGCGGTCCACCAGCACCGAAACCTTTAA
AAGGAAAAGAGCGCGTTTTGCACGCGGATAAAGTCTACAATTTATTAATG
GAGCTCgatcaaaacaatagaaacatTAGCCAATCATATCGCACGAAAAG
CCCCGTTCTGGCACCTAATTGGCTGATATCTTCGCGTCCGATCTCCTCAA
ACTCTTTTGCGCCATTACCTGAGATCAATGCAACAACGaagaaacagaaa
aagaaaaagacacaaaaagaaGTCAAATTTACTacTGAAAGTGTTCGGCG
TACGATATCAAAGGTATTAGAAGAGAACTTGAGAGACAAAGCGTACGACg
ccgaatatttcaaaacacATTTATGTATACTGACAGACATTATCAAGAGT
AAAATCAAACGATTTTATGGTCCTCGGTACCGTGTCATTTGTAATATGAA
CGTTTTCGAGATCAAAGGACAATCAGTGAGAACGGCAAGTCGCTGTTGTT
GGGACACGGAAAGAGATAATTTTACGGAATGTATTTTTGAAGGGAATGGT
TTTTCTATTACTTTTGTGGCCTATGGTGTTTACCTGGAATGACCACTGAT
TGGCTGAAATTgtaatcaaagcaaaattttcc
Run BLAST on NCBI

protein sequence of TCONS_00049307-protein

>TCONS_00049307-protein ID=TCONS_00049307-protein|Name=TCONS_00049307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MNRAQLSWVNHEHIAPKIEKDIPSYAEEKTEETKPSPPSYLERILSMTAD
IEEIKQPEDDGQETTSVGVSTEEYHGDNKDMTPPDLKVMEINEEGIEPED
EHSEILRQAKFEWLIPKDFGTFQVVHYDRPTVPDPFNDIIQSVMEENSSN
KNRLSVNQSKRATPKSPRTPRTPLSARSTTSGPPAPKPLKGKERVLHADK
VYNLLMELDQNNRNISQSYRTKSPVLAPNWLISSRPISSNSFAPLPEINA
TTKKQKKKKTQKEVKFTTESVRRTISKVLEENLRDKAYDAEYFKTHLCIL
TDIIKSKIKRFYGPRYRVICNMNVFEIKGQSVRTASRCCWDTERDNFTEC
IFEGNGFSITFVAYGVYLE
Run BLAST on NCBI

transcript from alignment at scaffold_154:660487..666267-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049307 ID=TCONS_00049307|Name=TCONS_00049307|organism=Clytia hemisphaerica|type=transcript|length=5781bp|location=Sequence derived from alignment at scaffold_154:660487..666267- (Clytia hemisphaerica)
GGAAAAGGGGGATTTGAAGGTAAAAACAGTGTAATGAGGAATTGAAACTA
AACTTTTTTTAAAGTCAAGGAGAAAAAATCTTTTATTTTGTACTAGGACG
CAATGGAATTTAAGTGAACAGAGAATCTTTTGTTAGCTATCGTGGTATAG
AGCTGTGTCTTTATGATGAATTTAGGACCAATCTCAGCTCAGAGTTTTCG
AAATTTTTAAGGAGAGCACACTTACAAAAATGCTCAAAAAGAATTTTCTT
TATGATTGTTTTTGACTTAGAAGAAAAAATTCTATTTCAGTTTGGAGAGA
AAGGTAGCCCGAGATAGATATGTGGATTTAAAGGCTATTTGGATGGATAT
GTGTATTGATGAACCGTCGTTTGTGTAAATGAAGACTCTGGGAGATTATC
ATTGATTTGAGAGTCATTTCATAGGATTTACTGATTCTTTTTACAATTGT
TTTTTGTGTTTTTAGTATTTCAGATAAACTATAAAAATGAATCGAGCTCA
ATTATCCTGGGTGAACCATGAGCATATAGGTAAGTTGCTGTTGAAATGTT
TTTCCTATTTTAGTTGAATGCCGGGTATAAGTGTGGACTGGACCTCCGAA
AAGCTACCCGTAGTGAGATTTTTTTTACTTTTTATGGTTTTCGAACCCAA
AAGAACCCAAAAAGAAGGAATCCCGACCTTTAAAAAGACGAAAAGATCTT
GATTTTCTGTTGTTATTGTAGTCTTTAGAGAGACTTATAGGAGGTAAAAA
GNAAGGAATCCCGACCTTTAAAAAGACTATCTTGACTTTCTGTTGTTTTT
GTAGTACTTAGAGAGACTTTAGGAGGTAAAAAACCAATCTTTACCATCCG
CACATACCCAACACCTATTTTTGCTTAAGTACTTCCCCTTGTATGGATAG
ATTTAATTTTGATATTGATTCGAGTCTTTAATAAGTCATAGTAAAAGCGT
TAGAAAATTGATCGCATCAAGCATATCCGCCATCTCACCTCGCCTCGCCT
CGGGCTTCTATATATTTCTGTTTATGACAGGAAAGGAAAAAGTCGAGAAA
AATTCATTGTGATAAGCTTGAGGGGTAGATCATCTTCGCGTATTCACACC
GAGACAAAAGTATCTATTATGAGGTGTTTTCTTCTTCCGAGGAAGAAGTT
TTCTCAGTGTTTGTCGAAAATATTCCCGTGTTTCTTTCAGTTTTTTTTCA
ATCATAAATCAAGAAAATTAGTGAAAACATCTGGATTTTTCTCTACAAAG
TTCTCTCTTCCTTGAAAATTTGAATATTCTCAGTTTCACATGAAAATTTA
GAGGGAATGATTTAAGCTAAGGTAATTGATACTGGTTATAAGAGAAAGCT
GATGCTAGGCAAGTCACTTTGTTTAAAATTGCATACACACCCTTTGTTGG
GCAGGAGGGGGTGGTGGGGCTGGGGTAGATATCTAGTTTAATTTTTTTAT
AAGAACATCCAAAGTTGTGGACGCCTTCGGATGTTTTAGAAATTTTTCCA
GTTTTAAGCCTAAAAATGTTCTCAAACCCTACCCTTAAGCTCGGGTCAAT
CTATGGACCGTTAGCCTCTCTCTGCATGTTTGTGCTTTGGTTCTTTTGGC
GAAAAAAGTTCTAGCCTAATTGCCATTCATCAATGATGACAATGATATCC
AATATGATTAACAGTAACAGGAATCAACCCTAGAAATCAGCTATAAATTG
CTTTTTCAGGAAGTCTCTCACAATATCATAAGAAACCTCAGTCTAGACGA
CGCTTAAGATAATAAGAAATAGGATATAGAATTACTTCTCGGCTAAAAAG
TATTGAAGGAAGAAATATATCTCTTGATTAAACTTAAAAAATATTTTATG
AATTAGAGGTACAGACATAGTCGAAGGACTTGATCAAGTATATTTTATTT
TTCTTAGCCCCGAAGATTGAAAAAGATATTCCATCCTATGCTGAGGAAAA
AACTGAAGAAACTAAACCGTCACCTCCTTCATATCTTGAGAGAATTTTAT
CCATGACTGCTGACATTGAGGAGATAAAACAACCTGAAGATGACGGGCAA
GAAACGACAAGCGTTGGTGTATCAACCGAGGAATATCATGGAGATAATAA
AGATATGACACCACCTGATTTGAAAGTTATGGAGATCAATGAAGAGGGAA
TTGAACCAGAGGATGAACACTCAGAGATTTTAAGACAAGCGAAATTTGAA
TGGCTGATTCCAAAAGATTTCGGAACCTTTCAGGTATGTTTACAATTATC
ACAGACGTTTTTTGGACGTTCATCTAACGTTGGACGTTATGGGCGTTAGG
CTGACGATATTTTGACATTTTGTGACTTAAATAAAAAATGAATCAAGAGA
ATGAATTTGAAATTCATCCCAAAACTGCATTTAAAACTTCAAAGCAGTTC
TTCTAGCCAGGGTAGATCCTCTAAAGAGCTCGCCTAGTAATCATGAAGCG
CAAAAACCGTTTTTTATCATATAAAGTTGATTCGCGACATTGTCATCGTT
CATTACAGGGAAAATAATATGCAAATGGTGGTATACGGAATTTTCTTCGG
CTTTTGGGTTTTTATTCAGTGATTTGTCTTGACTGTAGAATTGTCTAAGT
TGACTCTCGCAAATTCGAATTCAAACGGGAAGTCTTCTTTGTTCGAATAA
CAGAGAGGTTGAAATTATAGAAAGTAATTTTCCCTACGACGGGAACTGAT
AAATAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCATTTACCTATA
ACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGTATCATTGTAAAGA
TATTACTGAGTGGAACAATTTAAAATAAAAAAGTTCTTGAAAAATCCTAA
AAACGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTGTAGAGAAGT
GCTATAACTTTCATTTTTACTGTAGTGAATCTTTGATTATTGAACGTCAT
CACTGTGAAAAAATTTCTCAAATATAATCATTCAATCAAAAGATATCAAA
CAAAGTTATAAGCTGATTGACGTCTAAAAACCCTGTTTTCTGCTGTTTTC
TGCTGTTTTTTGGGGTCAATCACTTATCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATCTT
TCCAATGATACCAAATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATA
GGTAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGTTCGAA
TTATAGAAAGCTTCGAATAATAGAAGTTACAATTAGCGAAAGTCCATTGT
TGCCTCTTTACTTTTTTTAGGTTGTACATTACGATCGGCCAACCGTTCCC
GACCCATTCAACGACATTATTCAAAGCGTCATGGAGGAAAACTCGTCAAA
CAAAAACCGGCTTTCGGTTAACCAATCAAAACGAGCTACACCTAAATCTC
CACGCACGCCTCGGACACCTTTATCCGCGCGTTCAACTACAAGCGGTCCA
CCAGCACCGAAACCTTTAAAAGGAAAAGAGCGCGTTTTGCACGCGGATAA
AGTCTACAATTTATTAATGGAGCTCGATCAAAACAATAGAAACATTAGCC
AATCATATCGCACGAAAAGCCCCGTTCTGGCACCTAATTGGCTGATATCT
TCGCGTCCGATCTCCTCAAACTCTTTTGCGCCATTACCTGAGATCAATGC
AACAACGAAGAAACAGAAAAAGAAAAAGACACAAAAAGAAGTCAAATTTA
CTGTAAGTATCTATGACGCTATGTTGGTTTGCTCTCTCAAAGGCCTCTGT
AAAGCCATAACACATCTAGAAAAATTTGAACATGAAGAATATTCCTAATA
TAGTCTCACGCATTTAGTTGTGAAGATTTCAGGACGCTCTTGTTTAGAGC
ACTCGTTAACGGTGCATAAGGTTGTGATTTCAACCCAACTGGGATTTACT
AAAAGAATTGTAAATAGTACATTAAGCCTTTAAGACTCAGTGTAGGGGTA
ATGTAAGTAGAGGCGCTCAAGAAAAAAGAGTGGCCTCACCCCTTAGCATA
AAATATCAAAATTAAGTAAGAAAGCTAATTAAAAAGTAAGACTAGGTTCA
CCCTCAAATGCGGTCACAAAGCTTTGGAACACACAATCTTTAACAAGTAA
AAATAGACAATTTGAAGCATTTTTAGAGTGCTTTAAAGTGGTTTAACATA
TTTCATAGGGTTAGACGTCTAAGTACTTTCGTAGCCTTTTTTATAAGAAC
ATGCTCGAAAAAAACTTTCCCTGGTTAAATTAAATTAAGTTAAATTAAAT
CTTTCGCTAAGTGATTACATTTTTGCCACGGTAAACAAAGTGCCAATTTG
AGCCTGACCAATTTTACACCGCTTCTCAAGGTTGTACAAGTGGAGTCAAC
TCTCACAAATTCCAACTTCTATATTTCGAAATAATCCCCTCAGTTTGGCT
ACTAGTATAAAATGCTTTTTCTTTAATTCAAAATAAATTATTTGTTTCTG
GAGGATCGAATTAGAAAGAGACAACTGTACCTTAATGGCCCAAATCTTGA
GCATACGCAAATTTGGACTGGAAGTAACTACAAGATTAGGCATAACTTTA
TCTAGAACATATAACGAAAAAAACAACATAAAGTTTTATTACAGTTGAGC
CTTTATAACTCGAAAACATAGGGGCCACAAATTTGTTCGAGCTATGGAAA
ATTTGAATTATGAAACTTCGTCTATGTTTGTTATCTGTGACAGAACCAGA
AAAAATTTTCGAGTTGAGGAGATATTCGAATCATAGAGGTCCTACATATT
TTAGAAAGGCAGGGCAGCGTCCGTTGATGGCCAGAAAGGGCACTTTTTCT
TATGGTTTTCTGCTAAAAAGGCTGTTTTTACCAAAATTTTAGAGATTTCA
GGAGGGGCGGCAGCGTCCGATAACCGGACGCTAAAAGGGCATGAAAAATT
GCCTGTTCTAGATTTGAAGGCCTTCATTTTTTCTTATAACATAACATTTT
TGCATTTATTTTTGTTTAGACTGAAAGTGTTCGGCGTACGATATCAAAGG
TATTAGAAGAAAACTTGATAGACAAAANTTATAACTCGAAAACGCTAGGG
GCCACAAATTTGTTCGAGTTATGGAAAATTTGAATTATGAAACTTCGTCT
TGTTCGAGTTAAGAGGAGGTTCGAGATTTGAAGGCTTTCATTTTTTCTTA
TAACATAAATATTTGTATTTATTTTTGTTTAGACTGAAAGTGTTCGGCGT
ACGATATCAAAGGTATTAGAAGAGAACTTGAGAGACAAAGCGTACGACGC
CGAATATTTCAAAACACATTTATGTATACTGACAGACATTATCAAGAGTA
AAATCAAACGATTTTATGGTCCTCGGTACCGTGTCATTTGTAATATGAAC
GTTTTCGAGATCAAAGGACAATCAGTGAGAACGGCAAGTCGCTGTTGTTG
GGACACGGAAAGAGATAATTTTACGGAATGTATTTTTGAAGGGAATGGTT
TTTCTATTACTTTTGTGGCCTATGGTGTTTACCTGGAATGACCACTGATT
GGCTGAAATTGTAATCAAAGCAAAATTTTCC

Coding sequence (CDS) from alignment at scaffold_154:660487..666267-

>TCONS_00049307 ID=TCONS_00049307|Name=TCONS_00049307|organism=Clytia hemisphaerica|type=CDS|length=5550bp|location=Sequence derived from alignment at scaffold_154:660487..666267- (Clytia hemisphaerica)
GTATTAGAAGAGAACTTGAGAGACAAAGCGTACGACGCCGAATATTTCAA
AACACATTTATGTATACTGACAGACATTATCAAGAGTAAAATCAAACGAT
TTTATGGTCCTCGGTACCGTGTCATTTGTAATATGAACGTTTTCGAGATC
AAAGGACAATCAGTGAGAACGGCAAGTCGCTGTTGTTGGGACACGGAAAG
AGATAATTTTACGGAATGTATTTTTGAAGGGAATGGTTTTTCTATTACTT
TTGTGGCCTATGGTGTTTACCTGGAATGAACTGAAAGTGTTCGGCGTACG
ATATCAAAGGTTGTACATTACGATCGGCCAACCGTTCCCGACCCATTCAA
CGACATTATTCAAAGCGTCATGGAGGAAAACTCGTCAAACAAAAACCGGC
TTTCGGTTAACCAATCAAAACGAGCTACACCTAAATCTCCACGCACGCCT
CGGACACCTTTATCCGCGCGTTCAACTACAAGCGGTCCACCAGCACCGAA
ACCTTTAAAAGGAAAAGAGCGCGTTTTGCACGCGGATAAAGTCTACAATT
TATTAATGGAGCTCGATCAAAACAATAGAAACATTAGCCAATCATATCGC
ACGAAAAGCCCCGTTCTGGCACCTAATTGGCTGATATCTTCGCGTCCGAT
CTCCTCAAACTCTTTTGCGCCATTACCTGAGATCAATGCAACAACGAAGA
AACAGAAAAAGAAAAAGACACAAAAAGAAGTCAAATTTACTCCCCGAAGA
TTGAAAAAGATATTCCATCCTATGCTGAGGAAAAAACTGAAGAAACTAAA
CCGTCACCTCCTTCATATCTTGAGAGAATTTTATCCATGACTGCTGACAT
TGAGGAGATAAAACAACCTGAAGATGACGGGCAAGAAACGACAAGCGTTG
GTGTATCAACCGAGGAATATCATGGAGATAATAAAGATATGACACCACCT
GATTTGAAAGTTATGGAGATCAATGAAGAGGGAATTGAACCAGAGGATGA
ACACTCAGAGATTTTAAGACAAGCGAAATTTGAATGGCTGATTCCAAAAG
ATTTCGGAACCTTTCAGATGAATCGAGCTCAATTATCCTGGGTGAACCAT
GAGCATATAGGTATTAGAAGAGAACTTGAGAGACAAAGCGTACGACGCCG
AATATTTCAAAACACATTTATGTATACTGACAGACATTATCAAGAGTAAA
ATCAAACGATTTTATGGTCCTCGGTACCGTGTCATTTGTAATATGAACGT
TTTCGAGATCAAAGGACAATCAGTGAGAACGGCAAGTCGCTGTTGTTGGG
ACACGGAAAGAGATAATTTTACGGAATGTATTTTTGAAGGGAATGGTTTT
TCTATTACTTTTGTGGCCTATGGTGTTTACCTGGAATGAACTGAAAGTGT
TCGGCGTACGATATCAAAGGTTGTACATTACGATCGGCCAACCGTTCCCG
ACCCATTCAACGACATTATTCAAAGCGTCATGGAGGAAAACTCGTCAAAC
AAAAACCGGCTTTCGGTTAACCAATCAAAACGAGCTACACCTAAATCTCC
ACGCACGCCTCGGACACCTTTATCCGCGCGTTCAACTACAAGCGGTCCAC
CAGCACCGAAACCTTTAAAAGGAAAAGAGCGCGTTTTGCACGCGGATAAA
GTCTACAATTTATTAATGGAGCTCGATCAAAACAATAGAAACATTAGCCA
ATCATATCGCACGAAAAGCCCCGTTCTGGCACCTAATTGGCTGATATCTT
CGCGTCCGATCTCCTCAAACTCTTTTGCGCCATTACCTGAGATCAATGCA
ACAACGAAGAAACAGAAAAAGAAAAAGACACAAAAAGAAGTCAAATTTAC
TCCCCGAAGATTGAAAAAGATATTCCATCCTATGCTGAGGAAAAAACTGA
AGAAACTAAACCGTCACCTCCTTCATATCTTGAGAGAATTTTATCCATGA
CTGCTGACATTGAGGAGATAAAACAACCTGAAGATGACGGGCAAGAAACG
ACAAGCGTTGGTGTATCAACCGAGGAATATCATGGAGATAATAAAGATAT
GACACCACCTGATTTGAAAGTTATGGAGATCAATGAAGAGGGAATTGAAC
CAGAGGATGAACACTCAGAGATTTTAAGACAAGCGAAATTTGAATGGCTG
ATTCCAAAAGATTTCGGAACCTTTCAGATGAATCGAGCTCAATTATCCTG
GGTGAACCATGAGCATATAGGTATTAGAAGAGAACTTGAGAGACAAAGCG
TACGACGCCGAATATTTCAAAACACATTTATGTATACTGACAGACATTAT
CAAGAGTAAAATCAAACGATTTTATGGTCCTCGGTACCGTGTCATTTGTA
ATATGAACGTTTTCGAGATCAAAGGACAATCAGTGAGAACGGCAAGTCGC
TGTTGTTGGGACACGGAAAGAGATAATTTTACGGAATGTATTTTTGAAGG
GAATGGTTTTTCTATTACTTTTGTGGCCTATGGTGTTTACCTGGAATGAA
CTGAAAGTGTTCGGCGTACGATATCAAAGGTTGTACATTACGATCGGCCA
ACCGTTCCCGACCCATTCAACGACATTATTCAAAGCGTCATGGAGGAAAA
CTCGTCAAACAAAAACCGGCTTTCGGTTAACCAATCAAAACGAGCTACAC
CTAAATCTCCACGCACGCCTCGGACACCTTTATCCGCGCGTTCAACTACA
AGCGGTCCACCAGCACCGAAACCTTTAAAAGGAAAAGAGCGCGTTTTGCA
CGCGGATAAAGTCTACAATTTATTAATGGAGCTCGATCAAAACAATAGAA
ACATTAGCCAATCATATCGCACGAAAAGCCCCGTTCTGGCACCTAATTGG
CTGATATCTTCGCGTCCGATCTCCTCAAACTCTTTTGCGCCATTACCTGA
GATCAATGCAACAACGAAGAAACAGAAAAAGAAAAAGACACAAAAAGAAG
TCAAATTTACTCCCCGAAGATTGAAAAAGATATTCCATCCTATGCTGAGG
AAAAAACTGAAGAAACTAAACCGTCACCTCCTTCATATCTTGAGAGAATT
TTATCCATGACTGCTGACATTGAGGAGATAAAACAACCTGAAGATGACGG
GCAAGAAACGACAAGCGTTGGTGTATCAACCGAGGAATATCATGGAGATA
ATAAAGATATGACACCACCTGATTTGAAAGTTATGGAGATCAATGAAGAG
GGAATTGAACCAGAGGATGAACACTCAGAGATTTTAAGACAAGCGAAATT
TGAATGGCTGATTCCAAAAGATTTCGGAACCTTTCAGATGAATCGAGCTC
AATTATCCTGGGTGAACCATGAGCATATAGGTATTAGAAGAGAACTTGAG
AGACAAAGCGTACGACGCCGAATATTTCAAAACACATTTATGTATACTGA
CAGACATTATCAAGAGTAAAATCAAACGATTTTATGGTCCTCGGTACCGT
GTCATTTGTAATATGAACGTTTTCGAGATCAAAGGACAATCAGTGAGAAC
GGCAAGTCGCTGTTGTTGGGACACGGAAAGAGATAATTTTACGGAATGTA
TTTTTGAAGGGAATGGTTTTTCTATTACTTTTGTGGCCTATGGTGTTTAC
CTGGAATGAACTGAAAGTGTTCGGCGTACGATATCAAAGGTTGTACATTA
CGATCGGCCAACCGTTCCCGACCCATTCAACGACATTATTCAAAGCGTCA
TGGAGGAAAACTCGTCAAACAAAAACCGGCTTTCGGTTAACCAATCAAAA
CGAGCTACACCTAAATCTCCACGCACGCCTCGGACACCTTTATCCGCGCG
TTCAACTACAAGCGGTCCACCAGCACCGAAACCTTTAAAAGGAAAAGAGC
GCGTTTTGCACGCGGATAAAGTCTACAATTTATTAATGGAGCTCGATCAA
AACAATAGAAACATTAGCCAATCATATCGCACGAAAAGCCCCGTTCTGGC
ACCTAATTGGCTGATATCTTCGCGTCCGATCTCCTCAAACTCTTTTGCGC
CATTACCTGAGATCAATGCAACAACGAAGAAACAGAAAAAGAAAAAGACA
CAAAAAGAAGTCAAATTTACTCCCCGAAGATTGAAAAAGATATTCCATCC
TATGCTGAGGAAAAAACTGAAGAAACTAAACCGTCACCTCCTTCATATCT
TGAGAGAATTTTATCCATGACTGCTGACATTGAGGAGATAAAACAACCTG
AAGATGACGGGCAAGAAACGACAAGCGTTGGTGTATCAACCGAGGAATAT
CATGGAGATAATAAAGATATGACACCACCTGATTTGAAAGTTATGGAGAT
CAATGAAGAGGGAATTGAACCAGAGGATGAACACTCAGAGATTTTAAGAC
AAGCGAAATTTGAATGGCTGATTCCAAAAGATTTCGGAACCTTTCAGATG
AATCGAGCTCAATTATCCTGGGTGAACCATGAGCATATAGGTATTAGAAG
AGAACTTGAGAGACAAAGCGTACGACGCCGAATATTTCAAAACACATTTA
TGTATACTGACAGACATTATCAAGAGTAAAATCAAACGATTTTATGGTCC
TCGGTACCGTGTCATTTGTAATATGAACGTTTTCGAGATCAAAGGACAAT
CAGTGAGAACGGCAAGTCGCTGTTGTTGGGACACGGAAAGAGATAATTTT
ACGGAATGTATTTTTGAAGGGAATGGTTTTTCTATTACTTTTGTGGCCTA
TGGTGTTTACCTGGAATGAACTGAAAGTGTTCGGCGTACGATATCAAAGG
TTGTACATTACGATCGGCCAACCGTTCCCGACCCATTCAACGACATTATT
CAAAGCGTCATGGAGGAAAACTCGTCAAACAAAAACCGGCTTTCGGTTAA
CCAATCAAAACGAGCTACACCTAAATCTCCACGCACGCCTCGGACACCTT
TATCCGCGCGTTCAACTACAAGCGGTCCACCAGCACCGAAACCTTTAAAA
GGAAAAGAGCGCGTTTTGCACGCGGATAAAGTCTACAATTTATTAATGGA
GCTCGATCAAAACAATAGAAACATTAGCCAATCATATCGCACGAAAAGCC
CCGTTCTGGCACCTAATTGGCTGATATCTTCGCGTCCGATCTCCTCAAAC
TCTTTTGCGCCATTACCTGAGATCAATGCAACAACGAAGAAACAGAAAAA
GAAAAAGACACAAAAAGAAGTCAAATTTACTCCCCGAAGATTGAAAAAGA
TATTCCATCCTATGCTGAGGAAAAAACTGAAGAAACTAAACCGTCACCTC
CTTCATATCTTGAGAGAATTTTATCCATGACTGCTGACATTGAGGAGATA
AAACAACCTGAAGATGACGGGCAAGAAACGACAAGCGTTGGTGTATCAAC
CGAGGAATATCATGGAGATAATAAAGATATGACACCACCTGATTTGAAAG
TTATGGAGATCAATGAAGAGGGAATTGAACCAGAGGATGAACACTCAGAG
ATTTTAAGACAAGCGAAATTTGAATGGCTGATTCCAAAAGATTTCGGAAC
CTTTCAGATGAATCGAGCTCAATTATCCTGGGTGAACCATGAGCATATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031282XLOC_031282Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049307-exon-scaffold_154-1575043694:666249..666267TCONS_00049307-exon-scaffold_154-1575043694:666249..666267Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1575043694:665739..665794TCONS_00049307-exon-scaffold_154-1575043694:665739..665794Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1575043694:664035..664360TCONS_00049307-exon-scaffold_154-1575043694:664035..664360Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1575043694:662316..662747TCONS_00049307-exon-scaffold_154-1575043694:662316..662747Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1575043694:661019..661048TCONS_00049307-exon-scaffold_154-1575043694:661019..661048Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1575043694:660487..660805TCONS_00049307-exon-scaffold_154-1575043694:660487..660805Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1510915933:666249..666267TCONS_00049307-exon-scaffold_154-1510915933:666249..666267Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1510915933:665739..665794TCONS_00049307-exon-scaffold_154-1510915933:665739..665794Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1510915933:664035..664360TCONS_00049307-exon-scaffold_154-1510915933:664035..664360Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1510915933:662316..662747TCONS_00049307-exon-scaffold_154-1510915933:662316..662747Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1510915933:661019..661048TCONS_00049307-exon-scaffold_154-1510915933:661019..661048Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1510915933:660487..660805TCONS_00049307-exon-scaffold_154-1510915933:660487..660805Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1491911889:666249..666267TCONS_00049307-exon-scaffold_154-1491911889:666249..666267Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1491911889:665739..665794TCONS_00049307-exon-scaffold_154-1491911889:665739..665794Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1491911889:664035..664360TCONS_00049307-exon-scaffold_154-1491911889:664035..664360Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1491911889:662316..662747TCONS_00049307-exon-scaffold_154-1491911889:662316..662747Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1491911889:661019..661048TCONS_00049307-exon-scaffold_154-1491911889:661019..661048Clytia hemisphaericaexon
TCONS_00049307-exon-scaffold_154-1491911889:660487..660805TCONS_00049307-exon-scaffold_154-1491911889:660487..660805Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049307-proteinTCONS_00049307-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:660487..666267 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0364622	0	0.123853	0.0403903	0.0491713	0.0388559	11.6433	6.14598	11.6776	8.09385	5.02793	7.39907	15.4159	18.2926	0.165636	0.133314	4.02225	5.20227	50.8295	37.6847	7.34988	8.82302	3.58079	4.78664	2.7393	3.19251	0	0.26679	0	0.0824655
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005334Tctex
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049307 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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