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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049315 ID=TCONS_00049315|Name=TCONS_00049315|organism=Clytia hemisphaerica|type=transcript|length=2745bp
TGATTTTCTCCTTTGCTTTTTCAAGTTAGTTTGTGGTTCCATTTTATGTG
AGTGGTGGTGGGGGCAGGAGTGCTTGTGGTTCTTGGGTTTCCTGGTTCTT
GCTCCACAAGCgttggttttgtttttttgttttcgtcGTGTTACAAATGT
GCAGATTCAGCAAAATAGAATAGAGAAGAATAGAATCTACAGACCCGAAG
GAGCTGGATATTCAGGAGAATATTTGTGAGAGATATTTGGTCTGTAAAAC
TGTTTAGCTAGACTTGTCACAATTCGAAAACAAAGATGGCGCAACTCACA
CTTTGAGTATCGTGGTCAAACGCTAAAAGAAGAACATCCCGACAAACTAT
TGTATTTTAACTTAGAGAGTGAggtaaaagttctatttaaggtAGTTCCC
GAACAGGTCGATATATCGAAAGTACACCACTTTTTCACTTCACTTCACTT
GCACAAATTAGAAGATCAAAGATTGTTGCATCAAAATGAATGAAGAATAC
GATTGTATTATCCTTGGCACTGGCCTCACAGAATGTATCCTCAGTGGTAT
CATATCAAAAAGTGGTAAGAAAGTTCTTCACATGGATAGAAACAACTATT
ATGGTGCAGAAAGTGCTTCAATGACTCCACTAGCTGATTTGTACAAACTT
TTCAAAGAGGAAATAGGGTCAGATGATAAATATGGAAGAGGTAGAGATTG
GAATGTTGACCTCATCCCCAAATTTATCATGGCTAATGGTGAATTGACCA
AGCTTTTGATTCATACTGATGTCACGCGATACCTCGAATTCAAGCAAATT
GAGGGAAGTTATGTTTTCAAGAAAGGCAATAATGTTTACAAAGTCCCTGC
TGATGACAAAGAAGCTCTTGCATCAAGCTTGATGggcatttttgagaaaa
gaagATTCAGAAATTTCCTTATTTGGGCAATGAATCTGAAATTTGATGAC
CCTAAAACCTTCCAAAATCTTGACCCTGAGAAGTCAACCATGAGAGATGT
TTTCAAGAAATTTGGGCTTGATCAAAACACAGCTGATTTCACTGGTCATG
CTATCTGCTTGTTCTTAAAGGATGATTATCTGGACAAACCCTACAAAGAT
GCTATCACTAAACTAAAACTTTATTATGACTCTCTTTCCAGTTATGGGAA
ATCTCCATATCTCTACCCATTATATGGATTAGGAGAATTACCCCAAGGTT
TTGCAAGGCTTAGTGCCGTCTATGGTGGTACTTACATGTTGGATAAACCA
GTTGAAGAAATTGTCATGGAGGATGGTAAGGTTGTTGGTGTCAAATCTGG
TGGTGAAACAGCCAAAACCAAAATGGTCATTGCTGACCCATCTTATTTCC
CTGATCGCGTCAAGAAAGTCTCTCAAGTTGTTCGTGCAATTTGCCTCTTG
AAACATCCAATTCAAAAAGCTGGAAACTCACCCTCATTCCAACTCATCAT
CCCTGCTAACCAAGCTGGTCGTAAATCAGATATCTATGTTGGTGTATTAT
CTAATCAAAACCAAGTAGCTTCAAAGGATTATTACCTTGGATTTGTCAGT
ACTACTGTTGAAACCAGCAATCCTGAAGCTGAATTGAAAGTAGGATTAGA
TCTTTTGGAGCCGATTGAGAAGAAGTTTGTTTCTGTAAAAGATGTCTTTG
CCCCAACTGATGATGGAAAAGATTCCCAAATTTTCATTTCGCGATCGTAT
GACGCGACCAGTCACTTTGAAACAACTTGTGAAGATATCAAAGACATCTA
CAAACGTATCAATAATGAGGAATTCgatttcgaaaaagtcaaaggCAGCT
TGGGAGAAGAACAATAAATTACTGGAAAAGGGACATTCTCcaaatgaaat
aaatttgtACAATCTTCACTGCCTGAAGACCTTGGGATCAtactttgatt
tttgtttgGCTGTTGGATGAGCGAACAACTCTTTGAAAAGAGAATTTAGA
AATGTATTACGTAGGGGTCGTTTTgttttattaaatttaaaatgaCACTT
TTTTTGTTTGGcatttacttttttaattttgacaaggtaaatttaattta
atttttttattaaaagaaacaTGATAACCTATCAATTCAATATGCACCAT
CAGGATCCAATTACAAGTTAAGACAAGAATTACAAGTTAAGACAAGACAA
GACCTTACTCTTGATCTTTTAAGGACTTAAAAAGTATTGGACCAAAAATT
ACTGCAGTTATCATATAGTTGGAGTTGATTGCCTTTTAACGAGCCAAATA
CATCAAAAGGTAACgcaaaataattctttttgattacattattttcattt
tgataaaaatcaagaatttaacaatttattattttatttttaattatatt
ttttgagcattgAATATATTAGGATTCATATATGCTTCATTGAAGATACG
TTTATCTTACAAAAATTCGAGTGATTTCGTTAtggttttcttataagaac
atccaaaattttcgaagccttcggatgttcttaacttttttagttttaag
cctgaaaatgtgctcaacatgttcttattttcactattttctgagcattt
ttgccgattttcctaatatttttcttaatattttggccatcaaagcttTA
TCTTATTTTTAATAAACCCCTTAActtaaaaatattatataatgATATTA
TATTGGCAGGGGGGATACGACTTGTCATCCTCCTTTATAAACGTTCCCGT
TATTATATGGTGTTGTTCGTTTATTCTTTATTAGCTCAGCCTCAC Run BLAST on NCBI protein sequence of TCONS_00049315-protein >TCONS_00049315-protein ID=TCONS_00049315-protein|Name=TCONS_00049315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MNEEYDCIILGTGLTECILSGIISKSGKKVLHMDRNNYYGAESASMTPLA
DLYKLFKEEIGSDDKYGRGRDWNVDLIPKFIMANGELTKLLIHTDVTRYL
EFKQIEGSYVFKKGNNVYKVPADDKEALASSLMGIFEKRRFRNFLIWAMN
LKFDDPKTFQNLDPEKSTMRDVFKKFGLDQNTADFTGHAICLFLKDDYLD
KPYKDAITKLKLYYDSLSSYGKSPYLYPLYGLGELPQGFARLSAVYGGTY
MLDKPVEEIVMEDGKVVGVKSGGETAKTKMVIADPSYFPDRVKKVSQVVR
AICLLKHPIQKAGNSPSFQLIIPANQAGRKSDIYVGVLSNQNQVASKDYY
LGFVSTTVETSNPEAELKVGLDLLEPIEKKFVSVKDVFAPTDDGKDSQIF
ISRSYDATSHFETTCEDIKDIYKRINNEEFDFEKVKGSLGEEQ Run BLAST on NCBI transcript from alignment at scaffold_154:869026..875993- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049315 ID=TCONS_00049315|Name=TCONS_00049315|organism=Clytia hemisphaerica|type=transcript|length=6968bp|location=Sequence derived from alignment at scaffold_154:869026..875993- (Clytia hemisphaerica)
TGATTTTCTCCTTTGCTTTTTCAAGTTAGTTTGTGGTTCCATTTTATGTG
AGTGGTGGTGGGGGCAGGAGTGCTTGTGGTTCTTGGGTTTCCTGGTTCTT
GCTCCACAAGCGTTGGTTTTGTTTTTTTGTTTTCGTCGTGTTACAAATGT
GCAGATTCAGCAAAATAGAATAGAGAAGAATAGAATCTACAGACCCGAAG
GAGCTGGATATTCAGGAGAATATTTGTGAGAGATATTTGGTCTGTAAAAC
TGTTTAGCTAGACTTGTCACAATTCGAAAACAAAGATGGCGCAACTCACA
CTTTGAGTATCGTGGTCAAACGCTAAAAGAAGAACATCCCGACAAACTAT
TGTATTTTAACTTAGAGAGTGAGGTAAAAGTTCTATTTAAGGTAGTTCCC
GAACAGGTCGATATATCGAAAGTACACCACTTTTTCACTTCACTTCACTT
GCACAAATTAGAAGATCAAAGATTGTTGCATCAAAATGAATGAAGAATAC
GATTGTATTATCCTTGGCACTGGCCTCACAGAATGTATCCTCAGTGGTAT
CATATCAAAAAGTGGTAAGAAAGTTCTTCACATGGATAGAAACAACTATT
ATGGTGCAGAAAGTGCTTCAATGACTCCACTAGCTGATTTGTACAAACTT
TTCAAAGAGGAAATAGGGTCAGATGATAAATATGGAAGAGGTAGAGATTG
GAATGTTGACCTCATCCCCAAATTTATCATGGCTAATGGTGAATTGACCA
AGCTTTTGATTCATACTGATGTCACGCGATACCTCGAATTCAAGCAAATT
GAGGGAAGTTATGTTTTCAAGAAAGGCAATAATGTTTACAAAGTCCCTGC
TGATGACAAAGAAGCTCTTGCATCAAGCTTGATGGGCATTTTTGAGAAAA
GAAGATTCAGAAATTTCCTTATTTGGGCAATGAATCTGAAATTTGATGAC
CCTAAAACCTTCCAAAATCTTGACCCTGAGAAGTCAACCATGAGAGATGT
TTTCAAGAAATTTGGGCTTGATCAAAACACAGCTGATTTCACTGGTCATG
CTATCTGCTTGTTCTTAAAGGATGATTATCTGGACAAACCCTACAAAGAT
GCTATCACTAAACTAAAACTTTATTATGACTCTCTTTCCAGTTATGGGAA
ATCTCCATATCTCTACCCATTATATGGATTAGGAGAATTACCCCAAGGTT
TTGCAAGGCTTAGTGCCGTCTATGGTGGTACTTACATGTTGGATAAACCA
GTTGAAGAAATTGTCATGGAGGATGGTAAGGTTGTTGGTGTCAAATCTGG
TGGTGAAACAGCCAAAACCAAAATGGTCATTGCTGACCCATCTTATTTCC
CTGATCGCGTCAAGAAAGTCTCTCAAGTTGTTCGTGCAATTTGCCTCTTG
AAACATCCAATTCAAAAAGCTGGAAACTCACCCTCATTCCAACTCATCAT
CCCTGCTAACCAAGCTGGTCGTAAATCAGGTAAATTTAAAGATTAGATTT
ATAACAAAATCTAAAGATAACTTTTTCAATTTGAATAGCACAAAAATATA
TATTGAGGGTGAATGAAAAATTTTAAAAGTTACATTTTTCTAAATTATTT
GCGAGTAGGTAGATGTTATGTTGTTTGAGGGGCGTCACTCTCGTTGTGGG
AGTCTTTGCCCATTGTGGATTTAAGATTGGATAGAAAGTTAAGAATATGA
TAAGATTTATTGATTTTGTTTGTGGTATGTGGTATAAGATTTAGCTTTTT
GTCAATAGAAAGACCTGAAAACTTTATTTCATTTGCAAGTCATCATCACT
TTATTCCATTGAATTTTTATCCTCAGATATCTATGTTGGTGTATTATCTA
ATCAAAACCAAGTAGCTTCAAAGGATTATTACCTTGGATTTGTCAGTACT
ACTGTTGAAACCAGCAATCCTGAAGCTGAATTGAAAGTAGGATTAGATCT
TTTGGAGCCGATTGAGAAGAAGTTTGTTTCTGTAAAAGATGTCTTTGCCC
CAACTGATGATGGAAAAGATTCCCAAGTAAGTAAATCAAGCTTGCTTATT
TATGAACATAAGTTAACAAGCTATTATAAGTATGGCTATACAATTTATGT
TGGAAATACAAAAGACCAGGACCAAATCTTTTAAAACCAGAAAATACACA
GACAAATCACGACCTTACTTCAACAAGGTTCCAACTCTGCAAATTGCGGT
TTTTAGTAAAATGCATAAATTTGAAAATTCAGTGACTTTAAACAAGACCT
TGGCTTTGAAGCTTGGGTTTCCACTTAGCTTTTTTCTGTTACAGAAATAT
AATTTTAGCATGAATAAATCTTTAAAGCTGTGAAAAACATAAATATTAAA
TTTTCGATAGAACATTGTTGCCTCGAAGACTCAGAAATGCGCAAAGTCAA
CAAGGTTCCATCTAACTAAACTACTTCATTTTTATATGTTTAAAAGAATA
AATAGCCTGCAAAAACAATTAAAAATGACAAAAAAGACACAAACTAGCTT
TTCCAGTTGGAATTTTTACAAATTTCATTTTCATATCAAAGAAATCTTCA
ATTTAATGATAGAACCTTGTTGACCTTAAAATTATTGGAAAAGACATTAT
CGTGGATCGCGTTAAGGATTTTTGCTTGAAGATTTCCGATAGAACTTTAT
TGTAATGTGCCAAAGACCAAATTAACTGATAGAACTTAGTGGAATATGTT
ATTTTGAGCCATGGAATTAAGATATTTGAAAGTTTAAAGCCTTAACAATT
AGATTTTGGCGTAATAAACTTTATGAACCAAAAAGAATTTTCAAAATATT
CATGATAGAACCTTGTTGAAGTAAGATCGCGAAATTAAAGTCATTTAAAA
AAATCTTTCTTAGGAGATATTGTAACTTGGTCGAATGTTGACATCCCTTA
TGTAGAGATCCCTTCTTAGAGATTGGATTAAAAGGAAGGTCGGAATAACT
GATTGAGAAACAGTGTTTTCCTCACTGACTGTCTATTAGCAGTTAGTTAA
AGTACTTCAATTTACAAAGCGTCTTTACGTCACACAGAACAAAAGAAAAT
AGCAAAAGAACAAATGAATTACCCATAGCTACCATTTCGCAACCATGGGG
AATCATGATTTTACGGAAATGGGAATCCTCATATTAAATAAAGCATCTTC
TGAAAATTTTATTCTTCACCACAAATGCAAAAATAAAAAACGAAGAAACT
TTCGTTTTATAATTGTTTTTTCAATCTGCCATGAAGTGTTATAAAATTCC
TTAATGAATGACACTTTCTCCTACTAAGAGATTTAAAAAATGACGTATAA
ATGAGAAACTGAAAATTGATTACAAAACCTACGTCACAACCACGGAGTGC
TGACTTTTAGTTTTAATGACTTTTTCTCACTTGCTTGGTTTCCGTAATAA
AAAGAAAGTCGTTATTATGAACTTTGATTATGCTTTAAATGGAGGTATTT
TCATAGACTGATTAGCGATCAGTGACTCGACAATATATTATTCTCAGTTT
TAAAGGAGGGTTTCAGAATAAGTCCTGTGGAAGAATGAGACAGACCTTTT
GAATAACTAATTACTCCAGCGGAAATTTTTTTAATGATAATTTTCATATG
TGAATTTCCAAGGGATTTAAAGTACCTGAAAATCAGACCGGTCTTGGTCC
GGTATTACAAGCGGTCTAGCAGCTGTCAAATTTTTGTTTTAGAGCGGCCT
CCAGACCTTCTAGAAATGTGATCTAAATCATTAGACCCGTCCGGGCCGTT
TGTTAGACCGGTCCAGGATGCTAGTTTTAGGGATTTTTAGGAATGATTAC
ATAAAAAAATTCTTGTAAAAGGATGTCGACCGGACGATCAGGCCGGTCTG
GGACCAGACGCTTCGCAGCGGCAGCTAAATTAACTAGACTTGTAGCAGCC
TTTTGGTAAATTTTTACCGGTCCTTAAAAGACCGTCTAAAGACCGGTCCC
ATTTTCAGGCACTTTNAAGTAAATTTTTACTGGTCATTTACCGGCCCTTA
AAAGACCGTCTAAAGACCGGTCCCATTTTCAGGCACTTTAAATCGCTTGG
GGGGGGGGTCACATATAATTGATTTGTCTTTTACAACACATCTGTTACCT
AGGTACAATATAATCTCCTTTAGACTTGCTGGAGTAATTTGTTATTATAA
TAACACTTATATTATTATTATAATAACACATTCTCATAACTGTTGGATCA
GGGATGTCGACATTACACCACCTTAGGGTAGACAAACTGAGATGATTAGA
GAGACAGTAATTTCCTTTGAAAAATGCATGCATTATTAATTTTCCTTTTG
AAGAAATACTCGGATTAGAATTTTCCTTGAAAAATGTTAATTTGAATCTT
CCTCGGAAAATATGAGGTTAGCAACTTTCCTTGGGAAATACGCGGTTAGC
AACTTTCCTTGGGTAATACGTGGATAGAAATTTTCTTTGGGAAATATGTA
GTCAGTAACTTTCCTGGGGGAAATACGTGGTTAGCAGCTTTCCTTGGGAA
TAATGTAGTCAGTAACTTTTCTTGGGAAATATGTGGATAGCAACCTTCCT
TGGAAAATACGTGGAAAGTAACTTTCCTTGGGAAATACGTAGTCAGTAAC
TTTCCTTGAGAAATATACGGTTAGCAACTTTCCTTGGGAAATACCAGGTC
AACAACACTCCCTGAGAAATACTTGATTAGCAACTTTCCTTGGGAAATAT
GTAGATATCAAATTTCCTTGGGAAATACGCGGTTAGCAACTTTCCTTTGG
AAATACGGGGATAGCAAATTTCCTTGGGAAATATGGGGATAGCAACTTTC
CTTGGGAAATACGTAGATAGCAAATTTCCTTGGGAAATACGTAGATAGCA
AATTTCCTTGGGAAATACGTAGATAGTAATGTCCATGGGAAATACGTAGA
TAGCAAATTTCCTTGGGAAATACGTAGATAGCAACTTTCCTTGGGAAATA
CGTAGATAGCAAATTGCCTTGGGAAATACGTAGATAGCAACTTTCCTTGG
GAAATACGTAGATAGCAAATTGCCTTGGGAAATACGTAGATAGCAACTTT
CCTTGGGAAATACGGGGATAGCAATTTTCTTTGGGAAATACGTGGATAGC
AACCTTCCTTGGGAAATACGTGGTTTGTAACTTTCCTTGGAAAATACTAA
TAGATTAATAGTACACTTATACAATGGTTTTCCTTGGAAAATACACAGAT
AATATTCATAGTTTATTTAAAAATTGTGATTGATTTTCCTTGTAAATACA
AAGAAAATGTCTTTGGGGAATACATTTTCAAATTGTATTTATGATTTAAA
ACCATGTTAATTTGTTAACTTTCGGCAAAAATTGGCATATAAGTGTCATT
CACGAGTTATTCATAAAATCAAACCAAAGAGAAATTCTTCAAGACATTAA
TTAACTCCAGAAGACTTTATAAAATCTGGACACAAGGCTAAATCGCACAA
AAGTAATTTCCCTCAAAAAATATGCAATTTTTGAAAGATGCGGATAGAGA
TTGTAATTTTCCTTAACGCAAACAGTTATTTCCTTGAAAAATGGAATGTG
AAATGTGAACAGTAATTTTTGACATTCTGGCAGATAGTAATTTTAATGGG
CAATGCTCGCATAGTATCAGTCAGGGCAGTGAAAGTTGCCAAAATTAGCA
AATTTATAAGAAAGGGTGTGGGAAGACAAAATTTTGATACTTTTTGGGAG
GGATTCTACAAAAGGGACCAAATAATTTTTTAGAATGGAATTTTGTAACT
CAGCAATTACTTTTATCACGGTTGGGGGGTTGAACCAGGAGGACACTACT
TTTCCTAGGGCAGAAGTATTTGTTTTTTTAGGATTATGATAAAGAATAGC
CTTGCTATTATATTTTGAAATTTAAAAGAATATCAATTATTCCACCTTAT
AGATTTTCATTTCGCGATCGTATGACGCGACCAGTCACTTTGAAACAACT
TGTGAAGATATCAAAGACATCTACAAACGTATCAATAATGAGGAATTCGA
TTTCGAAAAAGTCAAAGGCAGCTTGGGAGAAGAACAATAAATTACTGGAA
AAGGGACATTCTCCAAATGAAATAAATTTGTACAATCTTCACTGCCTGAA
GACCTTGGGATCATACTTTGATTTTTGTTTGGCTGTTGGATGAGCGAACA
ACTCTTTGAAAAGAGAATTTAGAAATGTATTACGTAGGGGTCGTTTTGTT
TTATTAAATTTAAAATGACACTTTTTTTGTTTGGCATTTACTTTTTTAAT
TTTGACAAGGTAAATTTAATTTAATTTTTTTATTAAAAGAAACATGATAA
CCTATCAATTCAATATGCACCATCAGGATCCAATTACAAGTTAAGACAAG
AATTACAAGTTAAGACAAGACAAGACCTTACTCTTGATCTTTTAAGGACT
TAAAAAGTATTGGACCAAAAATTACTGCAGTTATCATATAGTTGGAGTTG
ATTGCCTTTTAACGAGCCAAATACATCAAAAGGTAACGCAAAATAATTCT
TTTTGATTACATTATTTTCATTTTGATAAAAATCAAGAATTTAACAATTT
ATTATTTTATTTTTAATTATATTTTTTGAGCATTGAATATATTAGGATTC
ATATATGCTTCATTGAAGATACGTTTATCTTACAAAAATTCGAGTGATTT
CGTTATGGTTTTCTTATAAGAACATCCAAAATTTTCGAAGCCTTCGGATG
TTCTTAACTTTTTTAGTTTTAAGCCTGAAAATGTGCTCAACATGTTCTTA
TTTTCACTATTTTCTGAGCATTTTTGCCGATTTTCCTAATATTTTTCTTA
ATATTTTGGCCATCAAAGCTTTATCTTATTTTTAATAAACCCCTTAACTT
AAAAATATTATATAATGATATTATATTGGCAGGGGGGATACGACTTGTCA
TCCTCCTTTATAAACGTTCCCGTTATTATATGGTGTTGTTCGTTTATTCT
TTATTAGCTCAGCCTCAC Coding sequence (CDS) from alignment at scaffold_154:869026..875993- >TCONS_00049315 ID=TCONS_00049315|Name=TCONS_00049315|organism=Clytia hemisphaerica|type=CDS|length=3996bp|location=Sequence derived from alignment at scaffold_154:869026..875993- (Clytia hemisphaerica)
ATTTTCATTTCGCGATCGTATGACGCGACCAGTCACTTTGAAACAACTTG
TGAAGATATCAAAGACATCTACAAACGTATCAATAATGAGGAATTCGATT
TCGAAAAAGTCAAAGGCAGCTTGGGAGAAGAACAATAAATATCTATGTTG
GTGTATTATCTAATCAAAACCAAGTAGCTTCAAAGGATTATTACCTTGGA
TTTGTCAGTACTACTGTTGAAACCAGCAATCCTGAAGCTGAATTGAAAGT
AGGATTAGATCTTTTGGAGCCGATTGAGAAGAAGTTTGTTTCTGTAAAAG
ATGTCTTTGCCCCAACTGATGATGGAAAAGATTCCCAAATGAATGAAGAA
TACGATTGTATTATCCTTGGCACTGGCCTCACAGAATGTATCCTCAGTGG
TATCATATCAAAAAGTGGTAAGAAAGTTCTTCACATGGATAGAAACAACT
ATTATGGTGCAGAAAGTGCTTCAATGACTCCACTAGCTGATTTGTACAAA
CTTTTCAAAGAGGAAATAGGGTCAGATGATAAATATGGAAGAGGTAGAGA
TTGGAATGTTGACCTCATCCCCAAATTTATCATGGCTAATGGTGAATTGA
CCAAGCTTTTGATTCATACTGATGTCACGCGATACCTCGAATTCAAGCAA
ATTGAGGGAAGTTATGTTTTCAAGAAAGGCAATAATGTTTACAAAGTCCC
TGCTGATGACAAAGAAGCTCTTGCATCAAGCTTGATGGGCATTTTTGAGA
AAAGAAGATTCAGAAATTTCCTTATTTGGGCAATGAATCTGAAATTTGAT
GACCCTAAAACCTTCCAAAATCTTGACCCTGAGAAGTCAACCATGAGAGA
TGTTTTCAAGAAATTTGGGCTTGATCAAAACACAGCTGATTTCACTGGTC
ATGCTATCTGCTTGTTCTTAAAGGATGATTATCTGGACAAACCCTACAAA
GATGCTATCACTAAACTAAAACTTTATTATGACTCTCTTTCCAGTTATGG
GAAATCTCCATATCTCTACCCATTATATGGATTAGGAGAATTACCCCAAG
GTTTTGCAAGGCTTAGTGCCGTCTATGGTGGTACTTACATGTTGGATAAA
CCAGTTGAAGAAATTGTCATGGAGGATGGTAAGGTTGTTGGTGTCAAATC
TGGTGGTGAAACAGCCAAAACCAAAATGGTCATTGCTGACCCATCTTATT
TCCCTGATCGCGTCAAGAAAGTCTCTCAAGTTGTTCGTGCAATTTGCCTC
TTGAAACATCCAATTCAAAAAGCTGGAAACTCACCCTCATTCCAACTCAT
CATCCCTGCTAACCAAGCTGGTCGTAAATCAGATTTTCATTTCGCGATCG
TATGACGCGACCAGTCACTTTGAAACAACTTGTGAAGATATCAAAGACAT
CTACAAACGTATCAATAATGAGGAATTCGATTTCGAAAAAGTCAAAGGCA
GCTTGGGAGAAGAACAATAAATATCTATGTTGGTGTATTATCTAATCAAA
ACCAAGTAGCTTCAAAGGATTATTACCTTGGATTTGTCAGTACTACTGTT
GAAACCAGCAATCCTGAAGCTGAATTGAAAGTAGGATTAGATCTTTTGGA
GCCGATTGAGAAGAAGTTTGTTTCTGTAAAAGATGTCTTTGCCCCAACTG
ATGATGGAAAAGATTCCCAAATGAATGAAGAATACGATTGTATTATCCTT
GGCACTGGCCTCACAGAATGTATCCTCAGTGGTATCATATCAAAAAGTGG
TAAGAAAGTTCTTCACATGGATAGAAACAACTATTATGGTGCAGAAAGTG
CTTCAATGACTCCACTAGCTGATTTGTACAAACTTTTCAAAGAGGAAATA
GGGTCAGATGATAAATATGGAAGAGGTAGAGATTGGAATGTTGACCTCAT
CCCCAAATTTATCATGGCTAATGGTGAATTGACCAAGCTTTTGATTCATA
CTGATGTCACGCGATACCTCGAATTCAAGCAAATTGAGGGAAGTTATGTT
TTCAAGAAAGGCAATAATGTTTACAAAGTCCCTGCTGATGACAAAGAAGC
TCTTGCATCAAGCTTGATGGGCATTTTTGAGAAAAGAAGATTCAGAAATT
TCCTTATTTGGGCAATGAATCTGAAATTTGATGACCCTAAAACCTTCCAA
AATCTTGACCCTGAGAAGTCAACCATGAGAGATGTTTTCAAGAAATTTGG
GCTTGATCAAAACACAGCTGATTTCACTGGTCATGCTATCTGCTTGTTCT
TAAAGGATGATTATCTGGACAAACCCTACAAAGATGCTATCACTAAACTA
AAACTTTATTATGACTCTCTTTCCAGTTATGGGAAATCTCCATATCTCTA
CCCATTATATGGATTAGGAGAATTACCCCAAGGTTTTGCAAGGCTTAGTG
CCGTCTATGGTGGTACTTACATGTTGGATAAACCAGTTGAAGAAATTGTC
ATGGAGGATGGTAAGGTTGTTGGTGTCAAATCTGGTGGTGAAACAGCCAA
AACCAAAATGGTCATTGCTGACCCATCTTATTTCCCTGATCGCGTCAAGA
AAGTCTCTCAAGTTGTTCGTGCAATTTGCCTCTTGAAACATCCAATTCAA
AAAGCTGGAAACTCACCCTCATTCCAACTCATCATCCCTGCTAACCAAGC
TGGTCGTAAATCAGATTTTCATTTCGCGATCGTATGACGCGACCAGTCAC
TTTGAAACAACTTGTGAAGATATCAAAGACATCTACAAACGTATCAATAA
TGAGGAATTCGATTTCGAAAAAGTCAAAGGCAGCTTGGGAGAAGAACAAT
AAATATCTATGTTGGTGTATTATCTAATCAAAACCAAGTAGCTTCAAAGG
ATTATTACCTTGGATTTGTCAGTACTACTGTTGAAACCAGCAATCCTGAA
GCTGAATTGAAAGTAGGATTAGATCTTTTGGAGCCGATTGAGAAGAAGTT
TGTTTCTGTAAAAGATGTCTTTGCCCCAACTGATGATGGAAAAGATTCCC
AAATGAATGAAGAATACGATTGTATTATCCTTGGCACTGGCCTCACAGAA
TGTATCCTCAGTGGTATCATATCAAAAAGTGGTAAGAAAGTTCTTCACAT
GGATAGAAACAACTATTATGGTGCAGAAAGTGCTTCAATGACTCCACTAG
CTGATTTGTACAAACTTTTCAAAGAGGAAATAGGGTCAGATGATAAATAT
GGAAGAGGTAGAGATTGGAATGTTGACCTCATCCCCAAATTTATCATGGC
TAATGGTGAATTGACCAAGCTTTTGATTCATACTGATGTCACGCGATACC
TCGAATTCAAGCAAATTGAGGGAAGTTATGTTTTCAAGAAAGGCAATAAT
GTTTACAAAGTCCCTGCTGATGACAAAGAAGCTCTTGCATCAAGCTTGAT
GGGCATTTTTGAGAAAAGAAGATTCAGAAATTTCCTTATTTGGGCAATGA
ATCTGAAATTTGATGACCCTAAAACCTTCCAAAATCTTGACCCTGAGAAG
TCAACCATGAGAGATGTTTTCAAGAAATTTGGGCTTGATCAAAACACAGC
TGATTTCACTGGTCATGCTATCTGCTTGTTCTTAAAGGATGATTATCTGG
ACAAACCCTACAAAGATGCTATCACTAAACTAAAACTTTATTATGACTCT
CTTTCCAGTTATGGGAAATCTCCATATCTCTACCCATTATATGGATTAGG
AGAATTACCCCAAGGTTTTGCAAGGCTTAGTGCCGTCTATGGTGGTACTT
ACATGTTGGATAAACCAGTTGAAGAAATTGTCATGGAGGATGGTAAGGTT
GTTGGTGTCAAATCTGGTGGTGAAACAGCCAAAACCAAAATGGTCATTGC
TGACCCATCTTATTTCCCTGATCGCGTCAAGAAAGTCTCTCAAGTTGTTC
GTGCAATTTGCCTCTTGAAACATCCAATTCAAAAAGCTGGAAACTCACCC
TCATTCCAACTCATCATCCCTGCTAACCAAGCTGGTCGTAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049315-exon-scaffold_154-1575043694:874515..875993 | TCONS_00049315-exon-scaffold_154-1575043694:874515..875993 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1575043694:873968..874167 | TCONS_00049315-exon-scaffold_154-1575043694:873968..874167 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1575043694:869026..870091 | TCONS_00049315-exon-scaffold_154-1575043694:869026..870091 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1510915933:874515..875993 | TCONS_00049315-exon-scaffold_154-1510915933:874515..875993 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1510915933:873968..874167 | TCONS_00049315-exon-scaffold_154-1510915933:873968..874167 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1510915933:869026..870091 | TCONS_00049315-exon-scaffold_154-1510915933:869026..870091 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1491911889:874515..875993 | TCONS_00049315-exon-scaffold_154-1491911889:874515..875993 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1491911889:873968..874167 | TCONS_00049315-exon-scaffold_154-1491911889:873968..874167 | Clytia hemisphaerica | exon |
| TCONS_00049315-exon-scaffold_154-1491911889:869026..870091 | TCONS_00049315-exon-scaffold_154-1491911889:869026..870091 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_154 | supercontig | scaffold_154:869026..875993 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005093 | Rab GDP-dissociation inhibitor activity |
| GO:0005092 | GDP-dissociation inhibitor activity |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015031 | protein transport |
| GO:0007264 | small GTPase mediated signal transduction |
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| biological_process |
GO:0015031 |
protein transport |
| biological_process |
GO:0007264 |
small GTPase mediated signal transduction |
| molecular_function |
GO:0005092 |
GDP-dissociation inhibitor activity |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
| molecular_function |
GO:0005093 |
Rab GDP-dissociation inhibitor activity |
Blast
BLAST of TCONS_00049315 vs. Swiss-Prot (Human)
Match: GDIB (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 530.02 bits (1364), Expect = 2.774e-179 Identity = 281/436 (64.45%), Postives = 353/436 (80.96%), Query Frame = 3
Query: 486 MNEEYDCIILGTGLTECILSGIISKSGKKVLHMDRNNYYGAESASMTPLADLYKLFKEEIGSDDKYGRGRDWNVDLIPKFIMANGELTKLLIHTDVTRYLEFKQIEGSYVFKKGNNVYKVPADDKEALASSLMGIFEKRRFRNFLIWAMNLKFDDPKTFQNLDPEKSTMRDVFKKFGLDQNTADFTGHAICLFXXXXXXXXXXXXAITKLKLYYDXXXXXXXXXXXXXXXXXXXXXXXFARLSAVYGGTYMLDKPVEEIVMEDGKVVGVKSGGETAKTKMVIADPSYFPDRVKKVSQVVRAICLLKHPIQKAGNSPSFQLIIPANQAGRKSDIYVGVLSNQNQVASKDYYLGFVSTTVETSNPEAELKVGLDLLEPIEKKFVSVKDVFAPTDDGKDSQIFISRSYDATSHFETTCEDIKDIYKRINNEEFDFEKVK 1793
MNEEYD I+LGTGLTECILSGI+S +GKKVLHMDRN YYG ESAS+TPL DLYK FK + GRGRDWNVDLIPKF+MANG+L K+L++T+VTRYL+FK EGS+V+K G +YKVP+ + EALASSLMG+FEKRRFR FL++ N DP+TF+ +DP+K+TMRDV+KKF L Q+ DFTGHA+ L+ DDYLD+P + I ++KLY +SL+ YGKSPYLYPLYGLGELPQGFARLSA+YGGTYML+KP+EEI++++GKV+GVKS GE A+ K +I DPSY DRV+KV QV+R IC+L HPI+ ++ S Q+IIP NQ RKSDIYV ++S + VA++ Y+ VSTTVET PE E++ L+LLEPIE+KFVS+ D+ P D G +SQIFISR+YDAT+HFETTC+DIK+IYKR+ EFDFE++K
Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYK-GGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNIYKRMTGSEFDFEEMK 435
The following BLAST results are available for this feature:
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