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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049405 ID=TCONS_00049405|Name=TCONS_00049405|organism=Clytia hemisphaerica|type=transcript|length=4534bp gttttctttttcataaaaagcAGCTGATATATCTGTTTCACCGATTGGTC ATTGTAGTCAGTATTTTATGCATCTAAAAGTCGACGGAATATGGTCGCCG ACATTATtatgtaaacaaacaaaatggcggaaAAGATTATGGATTTTGCA GACAAGAGCCCTCCTACTCCCGACTCGGACTCACCGTCTGAAAAGGCTTG GAAATACCTTAGTCACAATGATATCGTTGATGTAATTCAGtcACTGACTT CAAGCGTTGTAAACGAGCGACCTGAAAATTTGTTGGATTTCCTACTCGAG AAGTTACATTACCAAACGGCTTCGAGTCAATCGATAGAGGAGAAAGCATG AATTTGTAGATTTGGTAGTGATGATTTTCAATTATTTGTTATTCAATGAG CTTTGGAAGTTTGAAAATTGCTTGTTTAACAAAGTTATGATATGCAGCGT TAATATATAATAATCGTGTAAGCTGTTGCAATTTCACAATTTTGGACGAA GTACGATGAGAATAGGATTTATCCTGAAAACTCATACGTTCTGGATTATC TTCTTTTCGGATTAACAAAACATACGAATTTAACGGGCTCGATCATTTGA ACTTAGTATTTGGCCGTGTAAGCTTCGATTTAAAATTCTGTCCAATTATT TTCTAGCGATTTTATAACCCTTttaaaaaggccaaaaattgaaataaata gcAACTTTGAGTTTTCACCTTGAAAAACATTCCTACattgttttcttgaa ttttgggAGTAATTTGGTAATTGATCAAGTCTCCTTGaagtaaagtctgt ctcaatataatctgcagtggAGACACAAACGCTGAAACACTTTCGATATC ATTCGAATGAAATGGTGgtttgcactttttgaaaagataataaggagttt gatattttaaaaagatttcaaaaaaatagaaaataaagatgagacataaa gaagaaaaagattcaacttcttgtagaattgtCCTATGACGTTCACTTTC ATATTATaaaatcttcaatcttagaggatgcgaaaaaaaaaatttaaata tttattcAGCCAAAGCTAACTTTGGGATGTATCTTTTGAGTGAATTTATT atctttgaataattttttcactGAGATGATATTCTTAAATAAAAGAATTA CTGTTTGGAAATTGGAAATTACAGTTATTCACGAAGCTGAATTTTtcgtc ttcatttttcatctttttttccctttttttgttTGGTAATTTTCCACttc tgaatatcttttcaaacaaacgctaaaccgctatctaattcaaattctat caaaggtTACAGGTTTTTTGTCTCTGCTGCATTATATTGAGGCAGACTTA CGTAGACCTTTTATTTCGGACGGCAAATGTTAGTCGCAGGAGTTCAATTC TTCAAATTATATTAAGTTTTATCgtattggtttgtttttttgtttttttt attttccaattttaaaCTTTCCAATGGTGTATAAAAATAAATGTAATGAT AAAGTGTCAACCTAAATATTAAATTTGCTGAAGTTTTCTGCGTTGTACGT TCCTTGTTAAACCATGATAGAGAATGTTCCTTTCGACCGTTCCAAAATAC TTAATGCGTAATAGAAATGCctctgatttttttgcttcgtacaggCCCTT TTGGTTTATGAAAGGTCAATTAGCCTCAAATGGGGCCACAAAGAGGTTAG GtttgcaagaataaagccaagTGAACTTGAAAACTGATTTTCATGTGCGT ATGAattcgaaaatttgaatttgtataaaaattagCCAATAAAATTCAAA TCGCCAGAAAAATAGGTCAAGTAGATAATTTCGTTCCTTCGCATGTTTAC TTGTCAGCTCAGTAAGAATCATTTGagatagtattttatgtttcttCAGT TATTATATCTTACGAAGACGAAAACATTTTGGTTCGATTTTTTTTGTGTG ATAGATTCAGGATacttaatttttccttttcattgaaTAAGTCATGTGAC CGTTGTCTTCCCTCGAGAATTAGATTCCTTAGGCTATCAATGACTAAACA AATCtttgtgataattttttttttacaattttatttatttccatACATTT TATTTCTAATCATATTACTAATTTGCTAATTTAATATTAGAATAATGGAC AAGAAATAACTGAGTGAAAACTATCCATCAAGTAAGATCCGAGGATATTA TGGTCAGGGGATACTTGGTCTATTTGCGTGCCAAGCCTTCGGATGCAGAA CTTTTGTCACTTTTGACATACTTTGGTTCACAAGAAACCCCCCTTCCCcc tcgcttgttaatttttcgaaaactttccaACCCCTCCCCCCTCCCCTTCT GGACCTGATTTGTGCCTTtcttttttaccttattttttggttttcagaag tacaatgtCTAACTCTTCCCAgcaattaccccccccccttccgaTGACTT TTACAAACTTGAATAATCCTagaatttagaaatattttttaatcaacATA TTCGTCTGTAAGAATTGGCATAAGATACTTTCTATCAAAAGCACCATAGG TTCTGACAAGCCATGACTTTTCATATCTCTTTTTTTCAGCCCGATCTTCA GGTGTACTTCCTGGATCATCCAAATTAATCAAGCTCAATCGTTTAGCTTT AAATTCTTCTTCTACCTCATCAATTCCAGTTTCAAGGTTGATCAACTTGG CGAAAGGGAGGGTCAAGCCACCAAAAAAGATGACTGACACTAAAACAATC ATTAGTGTAGCTGTAAGCATCATTTGCCGTGGAACTGATACCGTATTTCG AATAGCCAATGAGAAAGCGATAGCTCCTCGAAGACCCGCGAATGTCATCA TATTTTGATGTTTGCATGGAATCTTTCGTGTCCTTCCACAGTTCAATAAG AGTGAGAGtggataaatattcaaaatacgaCCAATTTGAGTGGCCAAGAA AGCCACTCCAATAAATCCGAAATTCCATTGGTGAaagttgaataaaaaaa aagacagACCGATGtacgaaaaaatgaaattctccgCCAAGAAGTTTAAT AACTCGAATGTTTGAGTTGTACGTATCGCTGATTCAGGCGTCAAATTTTT GTACGTGTAATGTTTTTGTGCTATACCACAGAACAGCACTGCTACTATAC CAGACCAGCTGAATACTTCTGCTGCCAAGAACGTCACATACGACATTAGG AAAAAGAGAGCTGTTTCGAGAATAGGGAACATGCCAATTTTGGTGAGTTT GGAGAGGAGGGCAGTAAAACAAGCGATAAGGATGCCAATAAACAATGATC CAACGAAAATAGAAACAAAGTCGCCCAATGCGTAGAAAAAAGAGTAAATA TTAAATTGTCGTTGGTCGTATGGGTTGTACGCTAGATAAGCTTCGATGGC GCGATACAATACGATAGCCACGGCGTCATTTAAAACACTTTCACCGAATA TCAGAGCGTATAAATCAACATCGACGTGTAAATCATGGAAGATAGCTAGT ACTGTCACTGGATCTGTCGCCGATATCATTGCTCCGAACAAAAGACATTC GGTGAAATCAAATGTTTCAATAACTCCAGTCATTCTGTTGAAGTAGTATG TCATCACACCCACCACCAGACACGAAATACTTGTTCCAAAGAAAGCATAA ACGCAAATTGCACCAAGGTTACGGAAGAAATAGCGTCGTTTCAAACTGTA TCCACCAAAGAAAATGATTGGCGGTAGAAGCACGTAGAAGAAAATTTCCG GGTTAAATGATGATTTGTCTTGCAATTCGTTGCCACCCTCGTTTGCGCGA TTGTTAGTGGAGTGTTGCACGATACCACTCAACACATATGAATAATCTGT CCCGTTTATTTTCATCCACATATTACGGGGTGCTGTTGTTAAGTTCTCAC AATTGCTAACATGGACGAACTTTTCCACGTTATCTTTTTCTTCAGACAAT CTGATGATCCCACCAACGATTATTCCAAACAGCATGGCGACTCCAGTCTC GTGGAACACACTGAATCGACGTAGTTTGAACAACCAGATTACCAGCACAG TAGCAATAAGAAGACCGATTAAGATCATCATACTCAAGCTGTCTGTCTTG TGACTGCTCGAAAGTTCTTCTTCTTTCAGGCCTTCAAGAGAAACTGAATC ATCAATCATGTCGAAAGCCATGCTTACACTTTGAAACAATTGTAGGAACA AGAGCCCAACTTTCATTCGTCCACGGTCAAACATAATTGCATCGATTGAA ATCCAACTTAgtcttttgactttttcaaaatctttctcaAGAATTTCAGA TAATGCTTATGTGAGTATATCAATTACGCTAAAAATTGCTTATTGGAGCG AATCGGTTAGGCTAAAACAAATTAGGTTGTTTGGTGTATGCTTGTATAAA TATGTTTATTAAAGAATTTACTAAGGAGTGTCTTGgagatttcctaagca taatTTTGAAGGCCCCCCAAACGGTTTTCGTGATGCCCGGGGAGACATAC TCGCTttaaaaacgaccgtacgtgaGGACCAAAA Run BLAST on NCBI transcript from alignment at scaffold_157:11612..29190- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049405 ID=TCONS_00049405|Name=TCONS_00049405|organism=Clytia hemisphaerica|type=transcript|length=17579bp|location=Sequence derived from alignment at scaffold_157:11612..29190- (Clytia hemisphaerica) GTTTTCTTTTTCATAAAAAGCAGCTGATATATCTGTTTCACCGATTGGTC
ATTGTAGTCAGTATTTTATGCATCTAAAAGTCGACGGAATATGGTCGCCG
ACATTATTATGTAAACAAACAAAATGGCGGAAAAGATTATGGATTTTGCA
GACAAGAGCCCTCCTACTCCCGACTCGGACTCACCGTCTGAAAAGGCTTG
GAAATACCTTAGTCACAATGATATCGTTGATGTAATTCAGGTATCTATTT
ATCTATCTATCTATATATTTCATACTAAAAGGTCCTAGGACCCATTATCC
GTACCTTTGTTTGTTTTAAAAAATGAATAAATAAATAAATGAAATGTTAA
GTTAAGAGCAATAAAATATTTTGAAATTTTGATTAATGCTTGATAACGAG
AAAAGAATGAATAGGATAAGTGGAAAACCAAGCATACAGCCCTGCGTGCT
GTGATAGATTGTGCTTGAGACTAGATTTAATATATATAGAGAAGTACTAA
GAAGTATTAAAGCTAGCAGAAAGAATGTAACTTGAAGTACAGTAGCCTCA
GTGCTGGGGTAAACATAGGAGCAGGCAGGGGGGGGTCGGTAGTAAAATCT
CAGACATAATGACGTTTACTACGGTGGTGGTGTGACGAAAAATCGAAAAA
AAATTTTACTACCCAGGGTAGTTAAATACNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCATTTTCGGTATTTCTAT
TCTGGTCTGTAAAATATTTAGGTACCCCACAACCTAGCCCAATTGGCTAC
CCCAATTGGCTACCCTGCTTTTTAGACCAACCCTCCAAAAATGGTTGGCT
TCAATCAAGATTTTCTAAAACCCCTGCTTAGTAAAATTTCTTCTGAGAAA
AAGCAACTCCTCCTTCATGGATATCCTCGATTCTAATTTTATACTTCCAC
AGATCCTTTTACCAACAAGAATAACTGAGGACTCCAGGACTCTCATTGAT
AATATTATTTCTAGCCCATCTGATAATGGAACTGTATCTGGCAACATATG
CTTTTCCATTTCAGATCATCTCCCCCAGTTTTGTCTCTTTCCATCATTTG
AAGGTAAGTTTCCCGGTGAAGATAATACTTTTTTTCAGCAAGACTGGTCT
CGTTTCAACCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTTGTAG
AGAGACATCTACCCACAGTCAAACTTACCAAACGTCAAGTTAGATCAAAA
ACAAAACCATGGATAACGCCAGGAATTTTGAAGTCAATCAAAAACGTGAA
CACTACCATACAACACACGCTAAGGCTAAAACTAAGGAGTCCAAAGATCG
ACTCTATGAATTATATCGTAGATATCGAAATATGATAGTCACTTTGACTA
GGCGTAGTAAAAAAAACCACTACATCAGATATTTTGATTTCCATTCTAAA
AATTCTAGAAAAGTCTGGTCTGGTGTTCGCAATATAATCTCAACAAGGGC
TAACTCAGAATCACCCATTTCAATCATCACAGGTGACTCTTTGACATCAG
ATCCTGAGAAAGTAGCCAATTCCTTCAATGATTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCCTGTCTTCAAACACAA
AGGTTCTCCCCTTGAAGTCTCTAATTATAGGCCAATTTCACTTTTATCTA
ACATTGAAAAAATTTTTGAGAAAGTGATGTATTCACATCTCTCTGATTTT
CTTGAAAACCATAATCAAATCTACCCTCGACAATTTGGTTTTCGTAAGGC
TCACTCTACTGAGCATACACTAATTAATATTGTCGAACGTATCCGAAACT
ATCTTGATAATGGTGGGGTGCCTGTGGTGTATTTGTCGATCTACAAAAGG
CTTTCGACACAGTTGATCACGAAATCTTACTTGAAAAACTCGATCACTAC
GGAGTCAGAGGCATTGTTAATGACTGGTGGGCCAAATTGAAAAGTCCCGT
TTCTGTCACGGAAGGAAATCAGAGCCTTTTTTAGTCTATTTTTGAAAAAT
GGTAAACTTAATGAAAATAGTATTAATTAGTCCTGAATTAAAGCCTTTAT
AGTACTACTACTTCCAAACCAAAATAAATTTCATGAAAGTTTATTTCCAT
ATGCATATTTCCATGGTGCTGAAGCGATTTAGAGGATTTAGAACCAGCTA
GGAACAGTAGTTTTGCCAGAAAACCGGTTTTTAGGCCTCCAGAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCTGGAGCCTTAGTTTTAAGCTTATTCTGAGCTCCATACAGGGCTGAGCT
GGTTCCCAATGGTTCTAAACCTCGTTGGACACTCTCCTGCAATAAATTAG
ACCCATTGAAGTCCAAGATTTCTAAAAATAACAAGATATTTTTAATCTGT
CACGGAAGGACAAGGTGAAAGTGTCACGGAAGGACAATAATTTCAGACCT
TGTAAGTGAATATGAAGGAGGTTGCTTTGGAATGTAATGTCATTTTTTGT
TAGGGGGCACCAATAGTTAGAACTTGCAATAATATCAAGAATAGTGTACT
TGCACAAAACTGGGAAAAACACTTTTTGTCTTGAAATTGTCATGGAAGGA
ATTCGATATTTGAAAAAAGTTTCTGCTTGCAGTACTTTTTTGTTGTTTGA
CTTATTTCAAAATGAAAAAACCTATTAAACTAACTAGGGTATGTACTTGT
TTTAAAACGACATTTCATTTTTAATTAATCATTTATTTTTCAAAAGAAGG
TCCATTATATTTTAACACTTGTCCTTCCGTGACAAACCTCACTAGTTGTA
TTTCGATATAATCACCTGATTACAGAGACTAAAAGTGCGACTCAGTTGAT
TTAAAAGTTGAAATTAGAAAATTTAAGGGTTAATTTTACAAAAAATCACA
GTTACTTATTTTGTTTGTAAGATTTTTGATTTTGTGTTTTGGTTGACGAC
TTTTCAATTTGGCCCTGGTTCCGATCTTACCTCACTAACCGCTCCCAGTA
TGTTTCTCTTGCAGGCTCAAATTCCCTTTTAAAATCTATTAATCATGGAG
TTCCTCAGGGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAAGCTTTCGCAAAGTCATTTACTGTTAACAAAAGTTGAGATTCA
CAGGATCTTTTTTCTCTGAAACCATGTTGCAACTCTGACAATACTTTGTT
TTCGGTTAGGTGCGACATTACTTTACTGTAAAGTATGTGTTCTAGCAATT
TACAAACGATGGAAGTAAGTGATATTGGTCTGTAGCTTTCAGGATTACTT
CGACATTTCCCATTCCCTTTGTATGCTGGGACAATGAGGGCATGTTTCCA
AGCTGTCGGGAGTTCAGATTGTTTTAGAGAAGCTTCAAAGATAAGTTTCA
GGGCAGGAGATATTTCATCTGCAAACTCGATGAGGAATCTGGCTTTAATG
GTATCTGGGCCGGTTGCTTTATGTGGCCTGAGGGATATGATGAGTTTCTT
AATCCCATCAACCGATACTGTAAAGTCACTCATTTGATTGGCAACTCTAT
TAGGTATGGGTGGAGTTTTACCGTCTGGGTTGGAGAAAACAACAAATTTA
TCCTTCGATTACCGTACTTACCTTTAATAATTCAAAAGCACCAAATTCTG
CAAAAATTGGAATAGTATTGTGGTATAGCCCCCCCCCCCCCGGAGCAGAC
TTTCCAATTCAGTACAATTAATAACTTTTTCCAATCAATGGCTACGTAGG
GGGAGGTGTTAGAAACTAAAAATCAACCTATCTTTATGAAACCCTGGGAA
AAGTTGCCGTTCTGGGTGTTATTATATTAACAATGAAAAAAATTTTTTTT
TGCTGGGACCATTTTAAAGGCTTCCAAATTAGCCCTTTTTGACCCCGAAA
CCGCCCTACAAGCAAAAATATATTTTTTTTCCTCAAAACATATAAGTGTG
GGTACTTGTTGGAATGAAAATTTGATGCTGATCACTTTTTTATAACAAAC
ATACCCTAAAAATAAACTGAGAAAGAGTTTTTCCATAAAAACGCTATTAA
CGACTTGTAAAAGCACGCAATTTTCTTTGTTTTTGTTTAAAATGAAGTTT
ATTAACTGTTTACAGGAGCAATATTCCTAATTTAATTTGAAAGTTCTTCA
GCAAATGCTTTTTCAATAGAGCAACGAATTCTGACTCCTGATTGGGTGTA
TTTCACTTCAAACCCAGATGCCATTATTTGCTCAAAGGAAGTTTGTTGCA
CTTCAACCTCCTCTGGGAATACCCAATGAACACCAACTTTATCAGTTTGC
TTTAAATATGATACGTTTGCGTGATCACCATAAACATCACAGACAACACC
TATGATAATAATTAATATATATTAATAATGTATGCCTCAATAACATTTAC
TTTTTGAGAGACTGGTTTCCAGAGCACAAAAGTAACACTAAATTACCTAA
ATACCAAGAATAAGTGCCATCATCTTGTAGCCAAATTGCTGCAACATGTT
CTCCATTTTTCAACATTTTTGAACCGTTTGAATTATTACCGTTGTTGTCT
CTTTCGTCTTCTTTTGGAACACCTGAATTTATATAAAATTTATAAAATTA
GATAGAACTTGGTAAACATGAAATTGTTTTTCAGAAACTTAGCTGTTACA
TGGGTGGTAAGGCTGAGCACAATTTCGTTATTACCTTGTAGAGATCCCAA
TACATTGTTCAAGTCAGTTATGGTTAAGGATGCCATGTTCTATGAGTCAT
CAAGGTACTCCATCAAATTAGATGCATACTCTTCAGTCTCAAGTTTCTTG
CCTCCTCTTTTCAATCGAAAAACCTTTGCTGTTTCCTTGAGTGACAAACT
TGTGCATCTTGCGTACCTAACCTCAACATACAACCTTGAGTTTTTTTCTT
TGTTTGAGAAATTTGTGTTCTTCAAGTAATCTGCAACATCTTCTTTCTTA
GTGAACGGTCCTCCCAAGGTTTTCAGAAAGTCTAAATCTTTGATCTTTGC
TGAATCTTTCTTCGCATTTAAAACCTCTTTAGCATCGTATCCCTTTTTCT
CAAGATCTTGCGTATTTTTGTTCAAGTTTAGTTTTAATTCATTGATGGCA
ATCGATTGTTTTCTGTAGGAATTCAACTTTTTAGGGCCAGCAGCTTGCAA
GAGGTCCTTCGCTCTAAATGTAAAGGAATGTTGAGTGTGGAGTGTATTCT
AAATTGGAATATTTAGCACATTTTCAACATTCATTCGAGTTTTCTATATA
TTACTTTCATGTAGGAATCAAAAAGGTAAATATTATAATGAATTATATTG
ATCAATCGATTATGATAGATCCATAGTGTCCTCCAGGGTTTGTTCCCTCC
ACCAAATTCTTGATTTTTTTTAAATCTCCCCCCTCTTTTTTTCCCCCTAT
GACTTTTCAGTTTTTTAGTTTCCCCCCTCTTTTTTGCTTTCCCCCCAGAA
AATTCTGAAAATATCATTTTCCCCCCATATACCCGTATAAATTTCTCAAC
TTTCAACCTATGTAACACAAACATAAAATTTTGCTGCAAAAGGAATACTA
GACAAAATAGAACGAAAATTGGTTAATTTTTCAATCATGATCTAATCACA
TGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATAGCTATAATATATTATAATTACATTTCATGTACTCTCGGGTACCT
AATAGCCGGCGAGGTTGGAAAAAATCTCAAAACTTAATAAGCGGGGGGGG
GATGGAATAAAAATGTCCTTGGTAGAAAACTTTTGAAAAGGAGGCTAATA
CAGCAGAATTAGGACAAAAGAGGGAACTTCCAAAAACATTTTCCCAAAAA
TTTATAAGCGGGGGTTTGGAATAAGAATGTCCTGGGTGGAAAATTTCGAA
AAATTAATTAGCAGAGAGGGACGGCTATTAGGTATCGAGAGTACTTAAAT
TTTAGATATAACATTACTAATACATGCTAATATATGAATTTAGTAAATGA
AAATCAAACTTATGTAAAGATTTTGATAAAATGTCAAAATATACCACTTT
GAAATGTTTACTGTCGTCAAAGAAGCGCATCACGAACTCCAGGAAAGGAA
ATGTTATGTTTTTACCCAACAGGGCTAGGTGCAAAGTTTCCCATTTCAAT
TGCGCTTTTGACTCTGACCTCATGTAGTTATCTGTCCACATCTGTCTTGT
CACGGCACAGAAGGGAGAAAGGGTCGCGAAGTCAATATTGAAAAGTTAGA
TCTAACAATTGACTCTTTCGTTTGTTCTTTTTTAGTCACTGACTTCAAGC
GTTGTAAACGAGCGACCTGAAAATTTGTTGGATTTCCTACTCGAGAAGTT
ACATTACCAAACGGCTTCGAGTCAATCGATAGAGGAGAAAGCATGAATTT
GTAGATTTGGTAGTGATGATTTTCAATTATTTGTTATTCAATGAGCTTTG
GAAGTTTGAAAATTGCTTGTTTAACAAAGTTATGATATGCAGCGTTAATA
TATAATAATCGTGTAAGCTGTTGCAATTTCACAATTTTGGACGAAGTACG
ATGAGAATAGGATTTATCCTGAAAACTCATACGTTCTGGATTATCTTCTT
TTCGGATTAACAAAACATACGAATTTAACGGGCTCGATCATTTGAACTTA
GTATTTGGCCGTGTAAGCTTCGATTTAAAATTCTGTCCAATTATTTTCTA
GCGATTTTATAACCCTTTTAAAAAGGCCAAAAATTGAAATAAATAGCAAC
TTTGAGTTTTCACCTTGAAAAACATTCCTACATTGTTTTCTTGAATTTTG
GGAGTAATTTGGTAATTGATCAAGTCTCCTTGAAGTAAAGTCTGTCTCAA
TATAATCTGCAGTGGAGACACAAACGCTGAAACACTTTCGATATCATTCG
AATGAAATGGTGGTTTGCACTTTTTGAAAAGATAATAAGGAGTTTGATAT
TTTAAAAAGATTTCAAAAAAATAGAAAATAAAGATGAGACATAAAGAAGA
AAAAGATTCAACTTCTTGTAGAATTGTCCTATGACGTTCACTTTCATATT
ATAAAATCTTCAATCTTAGAGGATGCGAAAAAAAAAATTTAAATATTTAT
TCAGCCAAAGCTAACTTTGGGATGTATCTTTTGAGTGAATTTATTATCTT
TGAATAATTTTTTCACTGAGATGATATTCTTAAATAAAAGAATTACTGTT
TGGAAATTGGAAATTACAGTTATTCACGAAGCTGAATTTTTCGTCTTCAT
TTTTCATCTTTTTTTCCCTTTTTTTGTTTGGTAATTTTCCACTTCTGAAT
ATCTTTTCAAACAAACGCTAAACCGCTATCTAATTCAAATTCTATCAAAG
GTTACAGGTTTTTTGTCTCTGCTGCATTATATTGAGGCAGACTTACGTAG
ACCTTTTATTTCGGACGGCAAATGTTAGTCGCAGGAGTTCAATTCTTCAA
ATTATATTAAGTTTTATCGTATTGGTTTGTTTTTTTGTTTTTTTTATTTT
CCAATTTTAAACTTTCCAATGGTGTATAAAAATAAATGTAATGATAAAGT
GTCAACCTAAATATTAAATTTGCTGAAGTTTTCTGCGTTGTACGTTCCTT
GTTAAACCATGATAGAGAATGTTCCTTTCGACCGTTCCAAAATACTTAAT
GCGTAATAGAAATGCCTCTGATTTTTTTGCTTCGTACAGGCCCTTTTGGT
TTATGAAAGGTCAATTAGCCTCAAATGGGGCCACAAAGAGGTTAGGTTTG
CAAGAATAAAGCCAAGTGAACTTGAAAACTGATTTTCATGTGCGTATGAA
TTCGAAAATTTGAATTTGTATAAAAATTAGCCAATAAAATTCAAATCGCC
AGAAAAATAGGTCAAGTAGATAATTTCGTTCCTTCGCATGTTTACTTGTC
AGCTCAGTAAGAATCATTTGAGATAGTATTTTATGTTTCTTCAGTTATTA
TATCTTACGAAGACGAAAACATTTTGGTTCGATTTTTTTTGTGTGATAGA
TTCAGGATACTTAATTTTTCCTTTTCATTGAATAAGTCATGTGACCGTTG
TCTTCCCTCGAGAATTAGATTCCTTAGGCTATCAATGACTAAACAAATCT
TTGTGATAATTTTTTTTTTACAATTTTATTTATTTCCATACATTTTATTT
CTAATCATATTACTAATTTGCTAATTTAATATTAGAATAATGGACAAGAA
ATAACTGAGTGAAAACTATCCATCAAGTAAGATCCGAGGATATTATGGTC
AGGGGATACTTGGTCTATTTGCGTGCCAAGCCTTCGGATGCAGAACTTTT
GTCACTTTTGACATACTTTGGTTCACAAGAAACCCCCCTTCCCCCTCGCT
TGTTAATTTTTCGAAAACTTTCCAACCCCTCCCCCCTCCCCTTCTGGACC
TGATTTGTGCCTTTCTTTTTTACCTTATTTTTTGGTTTTCAGAAGTACAA
TGTCTAACTCTTCCCAGCAATTACCCCCCCCCCTTCCGATGACTTTTACA
AACTTGAATAATCCTAGAATTTAGAAATATTTTTTAATCAACATATTCGT
CTGTAAGAATTGGCATAAGATACTTTCTATCAAAAGCACCATAGGTTCTG
ACAAGCCATGACTTTTCATATCTCTTTTTTTCAGCCCGATCTTCAGGTGT
ACTTCCTGGATCATCCAAATTAATCAAGCTCAATCGTTTAGCTTTAAATT
CTTCTTCTACCTCATCAATTCCAGTTTCAAGGTTGATCAACTTGGCGAAA
GGGAGGGTCAAGCCACCAAAAAAGATGACTGACACTAAAACAATCATTAG
TGTAGCTGTAAGCATCATTTGCCGTGGAACTGATACCGTATTTCGAATAG
CCAATGAGAAAGCGATAGCTCCTCGAAGACCCGCGAATGTCATCATATTT
TGATGTTTGCATGGAATCTTTCGTGTCCTTCCACAGTTCAATAAGAGTGA
GAGTGGATAAATATTCAAAATACGACCAATTTGAGTGGCCAAGAAAGCCA
CTCCAATAAATCCGAAATTCCATTGGTGAAAGTTGAATAAAAAAAAAGAC
AGACCGATGTACGAAAAAATGAAATTCTCCGCCAAGAAGTTTAATAACTC
GAATGTTTGAGTTGTACGTATCGCTGATTCAGGCGTCAAATTTTTGTACG
TGTAATGTTTTTGTGCTATACCACAGAACAGCACTGCTACTATACCAGAC
CAGCTGAATACTTCTGCTGCCAAGAACGTCACATACGACATTAGGAAAAA
GAGAGCTGTTTCGAGAATAGGGAACATGCCAATTTTGGTGAGTTTGGAGA
GGAGGGCAGTAAAACAAGCGATAAGGATGCCAATAAACAATGATCCAACG
AAAATAGAAACAAAGTCGCCCAATGCGTAGAAAAAAGAGTAAATATTAAA
TTGTCGTTGGTCGTATGGGTTGTACGCTAGATAAGCTTCGATGGCGCGAT
ACAATACGATAGCCACGGCGTCATTTAAAACACTTTCACCGAATATCAGA
GCGTATAAATCAACATCGACGTGTAAATCATGGAAGATAGCTAGTACTGT
CACTGGATCTGTCGCCGATATCATTGCTCCGAACAAAAGACATTCGGTGA
AATCAAATGTTTCAATAACTCCAGTCATTCTGTTGAAGTAGTATGTCATC
ACACCCACCACCAGACACGAAATACTTGTTCCAAAGAAAGCATAAACGCA
AATTGCACCAAGGTTACGGAAGAAATAGCGTCGTTTCAAACTGTATCCAC
CAAAGAAAATGATTGGCGGTAGAAGCACGTAGAAGAAAATTTCCGGGTTA
AATGATGATTTGTCTTGCAATTCGTTGCCACCCTCGTTTGCGCGATTGTT
AGTGGAGTGTTGCACGATACCACTCAACACATATGAATAATCTGTCCCGT
TTATTTTCATCCACATATTACGGGGTGCTGTTGTTAAGTTCTCACAATTG
CTAACATGGACGAACTTTTCCACGTTATCTTTTTCTTCAGACAATCTGAT
GATCCCACCAACGATTATTCCAAACAGCATGGCGACTCCAGTCTCGTGGA
ACACACTGAATCGACGTAGTTTGAACAACCAGATTACCAGCACAGTAGCA
ATAAGAAGACCGATTAAGATCATCATACTCAAGCTGTCTGTCTTGTGACT
GCTCGAAAGTTCTTCTTCTTTCAGGCCTTCAAGAGAAACTGAATCATCAA
TCATGTCGAAAGCCATGCTTACACTTTGAAACAATTGTAGGAACAAGAGC
CCAACTTTCATTCGTCCACGGTCAAACATAATTGCATCGATTGAAATCCA
ACTTAGTCTTTTGACTTTTTCAAAATCTTTCTCAAGAATTTCAGATAATG
CTTATGTGAGTATATCAATTACGCTAAAAATTGCTTATTGGAGCGAATCG
GTTAGGCTAAAACAAATTAGGTTGTTTGGTGTATGCTTGTATAAATATGT
TTATTAAAGAATTTACTAAGGAGTGTCTTGGAGATTTCCTAAGCATAATT
TTGAAGGCCCCCCAAACGGTTTTCGTGATGCCCGGGGAGACATACTCGCT
TTAAAAACGACCGTACGTGAGGACCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00049405-exon-scaffold_157-1575043694:28951..29190 | TCONS_00049405-exon-scaffold_157-1575043694:28951..29190 | Clytia hemisphaerica | exon |
TCONS_00049405-exon-scaffold_157-1575043694:11612..15905 | TCONS_00049405-exon-scaffold_157-1575043694:11612..15905 | Clytia hemisphaerica | exon |
TCONS_00049405-exon-scaffold_157-1510915933:28951..29190 | TCONS_00049405-exon-scaffold_157-1510915933:28951..29190 | Clytia hemisphaerica | exon |
TCONS_00049405-exon-scaffold_157-1510915933:11612..15905 | TCONS_00049405-exon-scaffold_157-1510915933:11612..15905 | Clytia hemisphaerica | exon |
TCONS_00049405-exon-scaffold_157-1491911889:28951..29190 | TCONS_00049405-exon-scaffold_157-1491911889:28951..29190 | Clytia hemisphaerica | exon |
TCONS_00049405-exon-scaffold_157-1491911889:11612..15905 | TCONS_00049405-exon-scaffold_157-1491911889:11612..15905 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_157 | supercontig | scaffold_157:11612..29190 - |
Blast
BLAST of TCONS_00049405 vs. Swiss-Prot (Human)
Match: SL9A9 (Sodium/hydrogen exchanger 9 OS=Homo sapiens GN=SLC9A9 PE=1 SV=1) HSP 1 Score: 476.478 bits (1225), Expect = 2.990e-150 Identity = 264/526 (50.19%), Postives = 343/526 (65.21%), Query Frame = -1
Query: 2507 TVLVIWLFKLRRFSVFHETGVAMLFGIIVGGIIRLSEEKDNVEKFVHVSNCENLTTAPRNMWMKINGTDYSYVLS-GIVQHSTNNRANEGGNELQDKSSFNPEIFFYVLLPPIIFFGGYSLKRRYFFRNLGAICVYAFFGTSISCLVVGVMTYYFNRM---TGVIET--FDFTECLLFGAMISATDPVTVLAIFHDLHVDVDLYALIFGESVLNDAVAIVLYRAIEAYLAY-NPYDQRQFNIYSFFYALGDFVSIFVGSLFIGILIACFTALLSKLTKIGMFPILETALFFLMSYVTFLAAEVFSWSGIVAVLFCGIAQKHYTYKNLTPESAIRTTQTFELLNFLAENFIFSYIGLSFFLFNFHQWNFGFIGVAFLATQIGRILNIYPLSLLLNCGRTRKIPCKHQNMMTFAGLRGAIAFSLAIRNTVSVPRQMMLTATLMIVLVSVIFFGGLTLPFAKLINLETGIDEVEEEFKAKRLSLINLDDPGSTPED----RAEKKRYEKSWLVRTYGAFDRKYLMPILT 4051
T+L IWLFK RF HETG AM++G+I+G I+R + ++E V +C LT +P + + I Y Y I QH+ N GN + +K +F+PEIFF VLLPPIIF GYSLK+R+FF+NLG+I YAF GT+ISC+V+G++ Y F + G ++ F FT+CL FG+++SATDPVTVLAIFH+LHVD DLY L+FGESVLNDAVAIVL +I Y NP F+ +FF ++G+F+ IF GS +G A TALL+K TK+ FP+LET LFFL+S+ FL+AE +GIVAVLFCG+ Q HYTY NL+ +S IRT Q FE +NFLAEN IF Y+GL+ F F H +N FI AFLA + R NIYPLS LLN GR +KIP Q+MM F+GLRGAIAF+LAIRNT S P+QMM T TL++V +V FGG T P + + G+D ++E K +DP S ++ + E + L R + +FD KYL PILT
Sbjct: 34 TILTIWLFKNHRFRFLHETGGAMVYGLIMGLILRYATAPTDIESGT-VYDCVKLTFSPSTLLVNITDQVYEYKYKREISQHNINPHQ---GNAILEKMTFDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCIVIGLIMYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYSISIYSPKENP---NAFDAAAFFQSVGNFLGIFAGSFAMGSAYAIITALLTKFTKLCEFPMLETGLFFLLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSSDSKIRTKQLFEFMNFLAENVIFCYMGLALFTFQNHIFNALFILGAFLAIFVARACNIYPLSFLLNLGRKQKIPWNFQHMMMFSGLRGAIAFALAIRNTESQPKQMMFTTTLLLVFFTVWVFGGGTTPMLTWLQIRVGVD-LDENLK---------EDPSSQHQEANNLDKNMTKAESARLFRMWYSFDHKYLKPILT 542
The following BLAST results are available for this feature:
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