TCONS_00049411 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049411
Unique NameTCONS_00049411
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1451

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049411 ID=TCONS_00049411|Name=TCONS_00049411|organism=Clytia hemisphaerica|type=transcript|length=1451bp
TCATGACAGAGGAACTGAACAATCTCCTATTCATGAGGACGTGTAAAAAC
TATTCAAAATTCAAACTCATTGAAAGTTTAAAGGCTGAAAAAATGTGGAG
CTTTATGATAGTCGTTTGCGGAGTGTTTTTTTCGACAGTTTCAGGTGGAC
AAATATATCCTTCAAATGAAGTACAAAGTGTAGCTTTGAATTCAGATTTC
CACAAAAATTGGACAATTCAAACAGCACCAAATGAAGAAGCTAAATCAAT
TATTCTTTATTATCACAGTGGCGAAAAGGATCCTAAAGTAGCTTGGCACG
GAAGTGTCACCAAATTGGGAAAATCAACATTCAACAGATcattaaatgtc
aatattataGAAAATACTGAAGTTGTAGTTGAATTCTCAAACATTCAAGA
AGCCATGGTTTTATATTTGATGGTTCATTTTGTAGATGACAAGAGCGGGG
AAATGCATGCTTTTTACTCAAACGTCAAGATTGTTCTAAAAGTCAATGGG
GAATGGGCAAATTGGGGAAGTTGGAATGCATGTAGGTATAGGTATATTGA
CCACCTAAGTCGCTGTGAGAAATTTCAGAGACCTCTTAGATGCATAAAAG
GTATTTGCAATTTATCTCTTTGTTCTAGTGGATGGTGGTTGGTCTAGCTG
GAGTGGTTTTTCTTCTTGCACACTAAGTTGTGGAAGTGGTACGCAGTATC
GAACACGAGCTTGTGATAATCCAGCAAGTCAGTACGGAGGAAAGCATTGT
GAAGGCTATGAACGAGAAGAAAAATCATGCAATACCAATCCATGTCCTGC
TTGGTCAAGTTGGTCATGTCAACATTGTTcaaagacagccttacgaacaC
GCACGTGTCATCATGGATGTTCTGGCAAAACGACCGAAACTAAAGAAATG
TGCCAAATTGAATCTTCATGCTTCCCTGACAAAGttaTAAGCTACAACAC
TGGTTTATGGGGCAGTTGGCGTTCATGGGAGTATTGCCCAAAAGGAACCT
GGGTTGTCAAGCTACAAACAAATATCGAAAGCCACCAAGGAGATGGCGAT
GACACGGCATTAAATGCAATCTCTTTAAGATGTAACGATGATGTTGGCGC
TACCATCAAAAGTGGATCCACCAATTGGGGCACTTGGCAAGCCGAGTCAC
AAAAATGTATTAATGGATTTTACGGTGgaatgctaaaatttgaaagCTCC
CAGgggTCTGATGACGATACTTCGACCAATGCCATTCGTTTGATATGTCG
AGATGACAATCAGTGGTACAGAAGCGGTGAAGGTGGTTGGGGTTCATGGA
CACAAAGCACTTACTGTCCTGCTGGCTACAAAATTGTTGGTCTTCAAACA
CAGATCGAAAGTGACCAAGGGAGTGACGACGATACTAGTTTGAATGGTGT
TCGATTGTTGTGTCGATATTTTGGATAGGGCAATGGCGTGATACAGATAA
T
Run BLAST on NCBI

transcript from alignment at scaffold_158:329..18378-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049411 ID=TCONS_00049411|Name=TCONS_00049411|organism=Clytia hemisphaerica|type=transcript|length=18050bp|location=Sequence derived from alignment at scaffold_158:329..18378- (Clytia hemisphaerica)
TCATGACAGAGGAACTGAACAATCTCCTATTCATGAGGACGTGTAAAAAC TATTCAAAATTCAAACTCATTGAAAGTTTAAAGGCTGAAAAAATGTGGAG CTTTATGATAGTCGTTTGCGGAGTGTTTTTTTCGACAGGTATGTGAAATA TTTTCCAATTCCAAATTATGTTTGTGTTTAGTGGCCCTTGAAAACTAAGA AAATAGTATTAGCATTTTTTTGGGGGGCATTTAGGACTGCATTTTTTAAA CATTTTTCTTTCTCGTCGCTCAAAAACCCTATCTCTATCCTGTTTCGTAT CAAATAAAAAAATTTGAAAATGATAAATTATGATAAGTTCACGTTTTCTG GCTTACATAATTTTTTTATTCAATTCCTCGCAATCTTGCATTTAAAAGGG GGATCCCTGTTAAAGAGATCATCAGATAGTTTGCAATATTTGGCCAACAG AAACCTCCAATGGTCCTGAGTAGAGCCTCCTAATATTTTGGTTTAACTAC TTTCCAATGTTGAGATTTGAAATCTCTAAAAATACAACCCCTTCTCACAG ACCCACTTGGACCCCTTCCCACTAGAAAAATCAGCCAGAATATCGTCCCC GGTGGAAAATTATACTCCAATTTTTGTTCCCACTGAAAATAGTCAATTAA ATCAATCTTCACTGCCAGATGTTGTGCTATTTTCTCCATCTTCACTGAAT TTTTAGACTTGAAAATAAAAGAAGTGAAATCCCCAGCCATAAAAAACCGG GGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNAAAAAACCGGGGGGGGGGGGTACTAGG GCAAGATGGGTTACGGGGATGTTCTGCTGGTCTGGGTACCTTTTCTAACC TCCACGAGTCCCAGGTAGGGTCGCATAAACACCAAAATAGAAAAATCATT CCCTCGTAGCAGAGATTTGGGAAAAGAGGATAAGAATTGCTGCGCTATTC AGCTTTTGTTCTCTAGGCTAGGCAACCTTTTGTTCTATTAAAATATCTGC GCCCGATCGATTGTTTTAGTTCTGAGCCAATATAGAGGTACAAACAAAAA ATGGCAGCCGTGGTTGATATCGAAAGTGAAATAAAAATATTTCTAATATC GGGGGTTTTGGTATTTTTTATAAGCACTTTTCATTTTGGACATGGCGGAT ACAGTGTTGGTCGAGCCAAAAAGTTTCAGTTTTAGCCAAAATACTTTCCT CAAGGAATGCTCGAACCAATGTCACAGATTATATTTAAAATTCATTGCAT TCAAACACAAAACGAAGCTGGTAAAGCTAATATAGTTTTTCATTACTTCT CTTCTCTTCATTAACAAAAATTAAACACAAATCTTTATTTGGTCGCGTTG TAATAACAAAAAATAATAATAAACTGGGTTGGTGTAATTTAAGATGCAAG ATCTAACGATTTACGATTCACGATGCGCGATCCATGTATAAAGTATGCTG ATTATTCCTAATAATTATCATATAACTTAAATTATATAACATAATTCTAA AACAATAGCATAATCTTTTCTCGCTTTTGTTTACCACGGTAAATTCATGC GATAAAAAAGAAATGGAACTATGAATAATTACGACCGTAAAATTATGAAA AAAAACTAACTTGCATAATGTTGATAATGGAAGCTAACTTGTGAACATAT TACATTAGACAGAGAGTGAAAGTAAACAATATACAAGAAATATTTCTGCT CTCCTCAGTTTTAACAATCATAATCGAATATAGGATTTTCTTTCTTAAAG CAAATAAAAGAATATATTGGCAAACAATATGTTTTGCGGACCGTAATGTA CGAAGCAAAAAAACTGGTGCTCTATTATGAGAATGAATTTTCTTTCGGTA AACAATTCCCCTATATTGATTCAAGTTATAAAAAGAGAGAGAGAGTACAG AAGGTGAATGCACATGGTTTTCACTTTCTTTTTATCTACGACTGATTTAA ATATAATTTGTATAATCTTACATAAATGATGTTTTCAAAAATAATTGAGT TTCAGCGAATGAAAGTTTGTAAATTGCCTAAATATTTAATCATAATTTGC ATAATTACGCATGAATTACCATATTTTATGCACAGATCGCGCATCGTGAA TCGTAAATCGTTAGATCGTGCATCTTAAATTACACCAACCCTAATAAACT GGATAAATTTCTGGACTAATTTGATTCTTGTTATGTCAATTTTATTTGTC CTATTGCTTCCAAAAAGTTACTTAAATAATTGCAAGAAAATTAATTACAA TAGAAAAACTTTGACTTGATCCTTCCTCACTAAAAGCACCTTGGAAAATA AACATATATTGTGAAACAGTATATGAAAAATCGGTCACTCTTGGATTTAG GGGGGGGGGGGCTCACTAATTCCAATAGAGGTGTGATTCTAAGATAAAAA GCAATTTACGCTTTCAAATAAAATTTTAGAGAGAAAAAGTATGAATATAA CCAGACTGCTCATCAATGTGGGGGCGTACGGGTTTGTCGGTGTGTCGGTA TTGACCCTTTTTGCGTCGGTGTTTCGGTGTTTTAAGTAAAAAGTGTCGGT ATTTCGGTGTTGGACATGCCTTGCGGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTCAAACGATCTCATAAA GTTTTTGAATCTGCATTTCAGCTATTGAATATCTTATCTATACAAGAATT GTAGCTATGACGAGTAGAATTGTAGCTATGATGAGTAGAATTGTAGCTAT AATATAGCTATTTTTGGTAGCTACCCTGTCTCATCCTCTTTTTAAAATTG TGTGTATAATGGTGTTTCTTAACCACTTCTTTACGGGAAATGTTAACTTA AAAAATCATAATAGTGGGTAACAGGTAAAGAAAGCCAAGTTTGCAGAATT TCTCGAGGTCTCGAATGCAGCACTCATCAAAAATCAACAATCGTTAAATT CTTTCATCCGAATAATCCATTAACCTATGATTTAGATGCGTTTTTCAGCA TTTCTGGCACCTTAAATTTCAAATTTTGCCTCCTCTGGCCAAACCATGGT TGGCCCTCGAAACATATCTCATTTTGCCTTTCAATATAAAATACTTCCTG TGGTCCTCCCCTTGCAGAGCTCTCTTTGCAGGCTTTCAATGCCAGTTTAG TTTCAGCCTAAATCAAACGAACTATTTATCTGGATGGCGTAGTAAAATGA CTAGTTTTGTGAAAAAGAGAGCGTTTTTAGCCAAATGAGATTTCCTGAAA TATTTTTCTGTCGGCGCAAACCATACTTGTGCCTTCTTTTACCCACGTGG CTTTGTTTCAATCGGTTTCCGACCCTGTCTGGTTAAAGCGTTTTAAAGAC AATGTAATGAGAAACATGCTAAGGCTCCAGGGGTTTCGACCCATGAATGA TTAGAAAACCCATTTCTTGGGATCGGGAGGGGTTCTCCGTTATAATGTCA TGCCGTGAATAAGTCACCAAATGAGAGATTACCAAAAAGACCGAAACTTG TTGATGCTCGCTGTGGTTTTTGTGGTCTTATGCTGACTAACTTTCTCCTT TTTAGGAGCTCTTTTAAAGCCACTCTATACATACATGAGGCTCTTTNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGCAAACTTTCGGGTCGTT AAAATGTAATTTTAGAAAGAGGACATTCTATTGTTTAATTGAACAATGAA ATGACGTTGCGCGCGTTCTTTTGTTTTGATGATTTGTTTAAAAAAGTGCT ATATGTATAAAATGTCAGCATTTTTTAAAACAGCAATTCAGACCTCGCTA AAAAGCGTCAATGTGTAGAACAAATCGCCTTACAAAATCGCTTTAGGTAC AAAATTTCAATTTCAAGTATCAACAGCTCATGTATTTTATTTGAGCAGGG GCTTTATTTTTGGTGCTAAATCGGTATGATATAGGGCGTTTTTAGAGATT GAAAGTTGAAAGTTGAAAAATTTTCTGTCGGCGCAAACCATGGTTGCGCC TGATTGTCCAGAAGATTTTACATTTCAAATTACAAGGAAATAAATATCAA GTTATCATTATACCACCATCTTCGTATAAATAAAAATTCCAAGTTTCTTA ACTCAAAGATTCCGGGCGCTACTTTCAACCATTCACTGCTCTTACAGATT ATGTCACTTAATGATGGAGGGCGCAAATAAGGACAAAAAATAGCAGGGGC GCCTATTTCATAGTTTGCACCATCGAGAAAATTAAGTCAGGTCGCTACTG AACAAGAGCTCTTTTGCGGCGCCCTTTTCTAACGGTGCTTTCGGCTAAGG TAGATTTACTTCTAATAACGTTCAAAAAGATCTCTTTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTTTTGCAAAGATCTTTTAAAAACTTTTTAAATGT TTTTCTTCAAAGTCAACTAAAGTAAGCACTAAAGTAAAAATAGCACTTTA AACCCTTCAAAGTGTTCCTTAAAAATTCTGGATTTATTTATCCACTAGTC GTTGAAAAACTGAGCTTTAAAGATTTGAAACCCTTGAATCGGCGATAGTT TTCTCCAAGAAAAACTGAACTAGTGCACTACTGCGCTCGTGATATTGAGC ATTCGTACAGTACTAAGAATAAAAATCTTAAGCTTGCTCTAAAAGACGTC GGTGTCGGTGTTTTAGGAAAATTTTTTCGGTATTACGGTGATTTAAGAAA AATCTGTCGGTATTTCGATGTTGGTAACCCTCGTACGCCCCCCACATCAA TGCTCAAGAAAAGAGTATTTCATAAGATGAATAATTATATAATGTATATG ATGCATGAAAATAGTCCAGTGTCCAAACTGGAATTTCTATTAAAGCATTT TTGATATCTATATGGTTGGTTCATTTCTTGTAATTGTAGTCTAGCCTCAT TCTGGTGTCTTGTTTGGGACTATTTGCGTAATCAAGCAGGAAATCCTGGT GAAACAGGGATAAAAAGACCTCAATCCAACTACAAACAAACAATGACATC AGATTCCATTGTTGTTTCCTTTGAGTTAAATATGCTTTTCACCCGTCCAT CTTATTAGCAGAATTTGTTGGTGTTTGCAAAGATATTGAACCTTGTACTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTTGTACGTGACAAATTCAGACAAATTTTAAGCCAATTCTCAT TGTATACCAACCACGTGAAGGTACAAAATAATTCATGGATCTAGGTTACT GGGCAGTATGATGGTAACTAACCTGAAAGTATATAATAATGAAAATGGGA AATTAGGATTTTTGCAGCAAGCTATCATGAACAAATACAGAACACAACAA ATCTTAATTCCACCGACCACTGACAAAAACGGTGACAAAAACCAGTGAAA TAAATCTTATATAACTGGACAATCTATTAACCGATCAGAGCCAATCCATT AATCGGTCAGAGCCAATCTATTAACCGGTCAGAGCAAATCTACTAACCGG TGAGAGCAAATCTACTAACCGGTCAGAGCCAAACCGGTCATAGTTTTATA AATTACATAAGTGAAAATATTAGAACTTTGGTTGCAATTTTCTGTTACAT ACAAAAACTTGAAATTTCAACCCCAAAAAAATGTTTTTCCTCAGTAAAAG CTAAAAAGACATCAAGGATAATTTAGCGTACTTACCAAATCTAAAATCCA TTGCCATCAAGCAAGTTTTGCTAGGATAACATTATTTTTTCATCTAAAAC TAGGAAAAAATACAACATTTTTAGTCGATTTTGCCCATCTGCCCATCTTC AATCAAAATGCTAAGAAAGTTTGAGGATTTGCCATGTAAAACTAAGCTAT AGGTTGTCATTTAATCAATCTTACTGCTACGCATAAAAATTATGTTTGCA ACACAAAAAAAAATATTTTTATTCAACTTAACAAACAAAAAATACACTTT TTCATACGGCAAGTACAAAACGCCTACTACCTACTACTACTACTACTACT ACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTAC TACTACTACTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NACCTACTACCTACTACTTAATACTTACTACCTACTACTTACTACCTACT GTAAAATAGCTCAAAACGGCTCGAAATTACCTTTAAAATATTCAGCATAT TAAAATTAGCAAAATCTGAAACTTTGGTGGTAAAAAAGTTAAAACTTCTT CTTTTAGCGTACTTTGAAGACTTCAAAATATTTTGTCTCTTTTATTTTGT TTATGACTTTTTCCCGCGCTTTTTCTAGAAAGTTTACAGACGCACTTCTT TGTAGAAGAGAAAAATATTTCCTTCGCTCAGTTTTATTTATAAGAATCGA TCAATCTAAAAAGTTAAAATACTTTAAGTAAGTATTTCAAGCTATTTTAA GTAAGTAGAGCCCTATGCTTCACTGGGTACTTGCTGAAAATCCTTTGACA TGTTTTTGACATTTATTGACAAAATGACCCTTTTGAACCAAACTATTGAC ATGGTCGTTAAATATGACCTTTGTAGACTATTCATTTTATGTAGCAAAAA TTCTTATTGTGCTCAATAAGATGCTTTCAGTATCGCAAGCTAAAAATTTC TTAAATTTTCAGAAGGAAAATACTACAAAGAGCTGTTTTAGAGGTGTCAA TTTGACCATGTCAAAGTATGGCAAGTATTGACGAAATGAAATTTTTGATA AAAATATTGACACAGTTATTGAATATTAAATGCTTCGCAAACCAATTCCA AGAAATATTTGGCACCATTTGATATGATGCAGATCATACAATAGGATAGA GATAGATTGACCCCCTATTTATATTACAGAGCCTTTTTTAGACGTTTACG TGTATTCTTATCGTCTTATAATAAGAGTCATCAGAGGGAGTATGTTTAGG AAAAAGGAAAGTTCTTATAATAAGAGTCATAAGAGAGAGTAGGTTTAGGA AAAAAAAAATCAAGATAATGGCCTTTTGTTTTATACTTCAGTATACTTAT ATGAGGCGAAGAGAATATTTACTCACTACGTAAATATGCTAAATATTCTT TTAGATAACACTTTTTTCAAGTAAATATAAAGCAAAGACTTGTGTGTTAG CATTCAGATATTTCAAAACCAATTTTTTTAGAATAGAGATTTAGAACAAG CGAAGGAGAGTTCTGGTCTGTAAAGTATACAAACTGAGTAGGTAGTAAGT AGTAAGTAGTAGGTAGTAAGTATATAATATTTCAGCTATCTTTGAAGGAT GTGCCAAAAAGATCTAGAAGATGCCAATAAAAACCAAAGCTAGGCTAGTC ACCTACAACCTTTTGCCAACCCAAACCACTTTATTTTGACTCTGAAAGAC TTTCCAGTAAGGCAATAAACTAGCTAAAAATAAAAAGGTCCCATTCCACA TCCAATTTTAGCATGCCTGCTTCCACCATCTTTTTCTCAAAAAATAAAGC ATGCAACAGCAGATTTTTTTGTCAGTGGAAACCCCAAAAGATCGTTATTT GTTTTTCAGTTGTTTATATAAGTAGGACCCCCTCCAAAGGAGTAAATTCA GACAGTTTTTTTTGAACTGTTTTAATACTGCACATAACGCCATTTTTTCG CAGTACCTTCTTGGCCAAGTTGTTGCCTAGCCTAGCGACTTCAGACGACG CCGAATTCAATGGTCAACAATGAGAAAACAGCGAGCGGCAGCGGTGATTC TTATCCTATTTTCCCAAATCTCTGCTCGTAGGGTGCCTTTTTTTGGAAAA TTTGGGGAAAAAGTAGAAAATTTGAGAAAATTTCGGAGTTTCAGTTCCAT TCAGGGTCACTTTTTTCGCAAATTTCGAGTCCCACGTAGGATCCAAATAT AATCTTTATCGTTTTATTTTAGTTTCAGGTGGACAAATATATCCTTCAAA TGAAGTACAAAGTGTAGCTTTGAATTCAGATTTCCACAAAAATTGGACAA TTCAAACAGCACCAAATGAAGAAGCTAAATCAATTATTCTTTATTATCAC AGTGGCGAAAAGGATCCTAAAGTAGCTTGGCACGGAAGTGTCACCAAATT GGGAAAATCAACATTCAACAGATCATTAAATGTCAATATTATAGAAAATA CTGAAGTTGTAGTTGAATTCTCAAACATTCAAGAAGCCATGGTTTTATAT TTGATGGTTCATTTTGTAGATGACAAGAGCGGGGAAATGCATGCTTTTTA CTCAAACGTCAAGATTGTTCTAAAAGGTTTATTTAAAGCATACTCACAAC TTTTGGAAGTGAACAGCACCCGGGGGACACTCGATTTCTAAATGACGACA TATGTGCCGCCAAAAAATGACTTTAAATAAAATCGACTACCTCAAAAGGT CATAAACTTTTGAAATTTGGACTAAAATTTGAAAAGTTTGGCTGAAATTT TGGGTGACATCAAAAAATGGACAAAATTTTCGAAATGTAGTCTCTCTAAG AGTCGATTTTCCAAAGATTTATTATACACTGGATAAACGACTCATAAAAC GATGGAGAGCGATCATTGTATTTCCTTTGTTTCAGAAAACAATTGATTTT CTAGCTTTGCCCGCAAAAGACAACTGTCATGGCGGCTCGAAGATGTCTGA TTTTTAAAAATGTTTATCAGAAAAAAAAGTTGAAAGTAAGGCTAGTATTC CAACCCGGATACATTTGTGAAATCTAATGTGAGAAAAACATCATTAGACA AGAAATTCAGACAAAATGCTTATAGTGACACAAAATTTTCAATTGAAAAT ATCTTTCCAAGACTGTCCCCAGAAGAGCTGAAATTAACATACATAAGACT TGAGTGTCTTGGCTCCACTGTGATATAAAAATCCTTTGGAGGCATGTGGT GGCGAGGTGGTTTTTTTGAGGTTGAAGTTTGAAAATTTCCGGTGTCAACA TTAAATTTCTTATACACAACACGTCTTTTGCAACTTTCTCATAGCTTGAA ACGTCATAACGACTTATAATTATCATTAAGTGGAAGAATCTGATTCTCAC AGGAAAGTTTTAAGTCTCTTTTGGGAATTGGATAAGTGATTTTCGATAAA AAATGCAATAAAAATGCTTCGAAAAATCATTTAATGAGGGAAGGAGAGTG AACAATAATATCACTACTGCGGACATAGCNAAAATGCTTCGAAAAATCAT TTAATGAGGGAAGGAGAGTGAACAATAATATCACTACTGCGGACATAGCT AGTACACGAGAAATCGGCAAAAATCTGTTACTTTTATATCCAGTGTATAA TAAATCCTTAAATTTTCAAACTTTGGCTTGGACATACCCGTCATCTCCTA AACCTAGTACCCCCGGATCGATTTAGAGAGCTCCATTTACAACGCTTTCG CATTTCATAAGCCAGCATATTTGCTCTCCTTTTGTTTTAGTCAATGGGGA ATGGGCAAATTGGGGAAGTTGGAATGCATGTAGGTATAGGTATATTGACC ACCTAAGTCGCTGTGAGAAATTTCAGAGACCTCTTAGATGCATAAAAGGT ATTTGCAATTTATCTCTTTGTTCTAGTGGATGGTGGTTGGTCTAGCTGGA GTGGTTTTTCTTCTTGCACACTAAGTTGTGGAAGTGGTACGCAGTATCGA ACACGAGCTTGTGATAATCCAGCAAGTCAGTACGGAGGAAAGCATTGTGA AGGCTATGAACGAGAAGAAAAATCATGCAATACCAATCCATGTCCTGGTA AGAGTAACCAACGCCATGGGGAAATTAGCGGATTTATCTTCTTACCCAGC TGGCACACAACGTCGTTTCAACTTTCATCTAACGTTATATGGACATTGTG AATATTAGAAAAACGTTGAAACGACGTTGTGTTCCAGCTGGGTAAGCTCT GTGTTTTCTTGACATTGCTTGATATATTTTATTCCCTAGATCCTGGTCAC TGAGAGTAAAGGTAGATAATGGGCTTTTCCAGAAAAAAATTGAATATGGG GGTGGAGGATATAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCCCC CCCCCCCGGACACTATATCCTCCACCCCCCATGTATGAACATTTTCTGGA AGAGCCCAATAAGAATTTGTCCCATCATCATATTTGTAAACAAAAACTTC GGTTCCCTGTACAAATTATTTCAGCCAATTCTTCACACTCGTTCGGTTTT GGATTGAGGAGTGAAATGACAAGAAGTCTCGGTTTCTTCTCAGCCATATA GCGCAGAATAGAGTTTATAGAGTAATCCATATGATTAGGAGCTTGGAAAG CATTAACTGCAGCGAATCCCAATGATGTGGTTTATGACTGATCTGGTGAC GAAAAGTTTTCTTTTTATGTCAATCATTGCCTTTCACTCGTTCAAAACAG AACCACCTGGCAATGAAACACTTTTCCGATACCTTCAGGTGATCGCCAAC TCACCTAAGCTTGAAAAGCCTTTTTAAGATACAGTGTGTCCAAATAAAAG CGGAGAAATTTTTATTTATTTCTTCTCGTTTAATTAGATTATTTTTCTTA TAAGCATATACTTTATAAGAATCAAATCAATAACTCTCGATAGATGGTGA TATACCTTTGGGAATTAGTTTTTACAAAGTAAACGAGGGATGGCGCACAA TATGAACATATTTATTTTTCTTATAAGCATATACTTTATAAGAATCAAAT TAATAACTCTTGATAGACGGTTATGTACCCTTCGGTTACNTTACAAAGTA AACAAGGGATGGCGCACAATATGAGCATATTTATTTTTCTTATAAGCATA TACTTTATAAGAATCAAATTAATAACTCTTGATAGACGGTTATGAACCCT TCGGTTACTAGAAAATTTTTTGACCCCATCTAGGTTTGTCCACCCCCTGT ATGGTTATAAAATAGAACAACCCATTGCTGAAACCATAATCGACCAACAA ATAAAGGGCAGAATCGTCAATGGACCCGTAATTAGACGCACCCGAAAATT CACGACAAAAAGAATAGAGCGCTCTTCTCTTGATTCCAGACGTCTTGAAG AAATCAAGGATATCAGCGGTGTCTTCCGTGGTCTACGGAGATATGTCAAA ACCGTGGGTATTGAAGACAATACAGGAAGCGTCGAATGTTCTGCTGGTAC TTAATCGATTCCGAATCTCTATTTCTTTACGAAGAATATTTTGAGGTGGG CTTGGCGGCAATAAAGGTGAAATGGATGCAAAAAGATCTTCGAACTGGGT GGAAGCCTGGCTGGTATTCTGCTGTTGTCCAATCATTTGATATTCAAAAC GACACCATCAACATCATTTAAAATTTAGAACCTAACGTGATATACTCAGT GGAAATATCCCCTTGCATTTCGTCTTGCAGAATCAAATTAGCTGCGAAAT GATTTAATTAACTAGCCAATTATACTTTTCNCAACATTATTTACAATTTA GAACCTAACGTGATATACTCAGTGGAAATATCCCCTTGCATTTCGTCTGG CAGAATCAAATTAGCTGCGAAATGATTTAATTAACTAGCCAATGTATACT TTTCCCTATATTGCATCCATTTTCCAGTCCCCACCTAGCCATAACTACTT CATCTTTTTCATTTTTAAATCAAAAAACTTTTGAGCTTGTTTGTTTACAT GCTTGGAGGTCTTTTTCTATGCTCGCTAGCCGGAAATCTCTTTTTGGTGA TTCCCGCCTCTTTTCGGTCTTTGACTAATTAACTAATTAACTAATTAACT AAGATTATAAAATTTACTTGCTATACTTTATCATTTCTCCTTATTTTTAA AAACAGTAAAGTAANAATCAAGGATATCAGCGGTGTCTTCCGTGGTCTAC GGAGATATGTCAAAACCGTGGGTATTGAAGACAATACAGGAAGCGTCGAA TGTTCTGCTGGTACTTAATCGATTCCGAATCTCCATTTCTTTACGAAGAA TATTTTGAGGTGGGCTTGGCGGCAATAAAGGTGAAATGGATGCAGAAAGA TCTTGGAACTGGGTGGAAGCCTGGCTGGTATTCTGCTGTTGTCAAATCAT GTGATATTCAAAACGACACCATCAACATTATTTACAATTTAGAACCTAAC GTGATATACTCAGTGGAAATATCCCCTTGCATTTCGTCTGGCAGAATCAA ATTAGCTGCGAAATGATTTAATTAACTAGCCAATGTATACTTTTCCCTAT ATTGCATCCATTTTCCAGTCCCCACCTAGCCATAACTACTTCATCTTTTT CATTTTTAAATCAAAAAACTTTTGAGCTTGTTTGTTTACATGCTTGGAGG TCTTTTTCTATGCTCGCTAGCCGGAAATCTCTTTTTGGTGATTCCCGCCT CTTTTCAGTCTTTGACCAATTAACTAATTAACTAATTAACTAAGATTATA AAATTTACTTGCTATACTTTATCATTTCTCCTTATTTTTAAACTATTTTT AAAAACAGTAAAGTAAAATTTTTATAATTTTAAAAAGCATCGACGTAAAA AGAAATCACCTTTTTATTGGAAATCTAATTGTTTACGCGCTTCTTAAAGT GTTGGATTATAGGAATCAGCTGGCGATTCTTGATGTTACGTTTTATTCTT GCTTGACTAGACCCAAATCATTTTTTATCAGCAAAGTCAGTTAGGGTAAA CAAAATCATGGTATTCCATAGGGTTAAAGAATTTTCTAATCGGAATTACA TAGAGGTAAGGGATTTGTAGATCCGGAATTCCATAGGAGCAGATGATTTG AAGTTCCAGAATTCCATAGGGGTAAGGGAATTTTCGGTCCGGAATTCCAT GGGGGTGCACCTAAAAAAAGGAACCTCCTCAACAGGGGGGTACGGACTTT ATCTGGAAAAGCCCATTGCAGAAATTGAAAATATGTTTTCTTCAGTAGAT CAGCTTTTGCCTCTAAGGTTTCCCTGAGCTTTCATGGCGTTTGAATTTGA AGACTGTATTATGATTCATGATCATCCAAAAATTTTGAAGCCGCTTCGGA TGTTGTCAATATTTTGGGTATTTTTGTCCATTTTCCTAAAAGAAAATGGG TATTTTAGAGTCCACGGAGCCTTAAAATGTTCTTAACTTGTTCTTAATAT TTTGGCCATTGAAGCCTTTTGTTCTTATATAGTTTGTTCTTACTAGATTT TTTGGCAAGTTTTTTAAGCAAAGTATAACTATTATCCTGCCGCTCGTACT GTCTTCAAGAAAATTGGGAACTGATTTCTCTTTATCTTGTATTCTTTTAC CAGCTTGGTCAAGTTGGTCATGTCAACATTGTTCAAAGACAGCCTTACGA ACACGCACGTGTCATCATGGATGTTCTGGCAAAACGACCGAAACTAAAGA AATGTGCCAAATTGAATCTTCATGCTTCCCTGACAAAGGTAATGCAACCC TGTCTCAAGTGAAAGTGCTTCTTAGTTTTTTAAAGAGGAAAACAAGTACT TGACAGGGTTATTATTCACTGGGGACGAGTTTAGCCGCATTCGGTGAAGG GTTTTTACGTCAAATACTGAATGTGGATTTTGTTAATTTCAATTATTGCC CCGCAGGGGATTTTGTTCCTTCACGTAGTGGACTTGCTCGCCAGAAAAAT ATTCATGTCGTTGATGTTTCTTCCGATTCTGAGCGGACCGCCGCTGTTAA AAAATGGTCACGCGCACCTATTGTTTTGTCTACTTTGTTGCGACTTGTAT TGATTTTAGTTCTATTCTATTCTTCTATTTATTAAATTCTATATTCTTAC AAAGTAAAACAGGGACAGTGCACAATATGTGCATTATTTTTCTTATAAAC ACAAACTTTATTAGAATCATATCAATAACTCTTGATAGACAGCCATATAC TTGGTAATTAGTTCCTACAAAGTAACAACAACAACAAGGGATATTTAAAA GATATTTTACTGTGTGCGCCAAGCTGTACACCTCGTTTCTTTTTTATCAG CCAATCAGTTCATTCTCAATTATGAATGCGTTCGCGAGGCATTCATAGCG CGACCGCTACTTGCTAGTATAACCCAAATAGAACGGTCGTAGCGATAATT ACTTTTGGAAGTTGCCACTGCCAATTTTCTTTAGCTCAAATTTACTTTTC ATTCAATCTACACACATATACCATCTATCTACACTAAAAAATTATTTTTT AGTTATAAGCTACAACACTGGTTTATGGGGCAGTTGGCGTTCATGGGAGT ATTGCCCAAAAGGAACCTGGGTTGTCAAGCTACAAACAAATATCGAAAGC CACCAAGGAGGTATAGAATCTTTCATAAAAAGTTGTTTCCGAGAATTTCA TGGCATGGTTTTTTAAAATCTCTTCAGTTCCTGCCAAGTATAATTTTCAT CGTTCTTGAAATTAATCAAAATACAAAATTATCTCGGGTTATAAATTGGT TCTCAGGGCAAATTTTCTTATGAAATGGGTTCTATGGTAAATACATGTGT TTTATATCTTATCTTAGAGCAGTTACAACTCTAGATAGAGAGATAGGAAT TTACTACTCACTATAGCTAGATACTGATAGTTTTTAATAAAGTTTTTCTC TTTGTTCAATGTATGTCTCTTTTTATCCCAGATGGCGATGACACGGCATT AAATGCAATCTCTTTAAGATGTAACGATGATGTTGGCGCTACCATCAAAA GTGGATCCACCAATTGGGGCACTTGGCAAGCCGAGTCACAAAAATGTATT AATGGATTTTACGGTGGAATGCTAAAATTTGAAAGCTCCCAGGTAATACA CATTGGACTTCTGTAACTTATCATCTCCGAAGAATCAAAATATCATTTTA AGGCTTTTAAATTTTCCAGCAGTCAATAATTTCGGTTTCTCAAGAACCAA GAACTCAAATTTACCCCTGTTTAAGAGGTCATCTTATTGAGTTGATATTT TTAGAGGTTAGATACCATTACACCTCCTTAATAAAGTTGATTACATAGAT CCTTCTACTCTTCTTATCAAAATATTTATTCAAATCCCAACCCCTCCCAC GTGCTAAAATTACCTTGTAAGAAATAAATCTTATTTTATAATGAATTTTC AGGGGTCTGATGACGATACTTCGACCAATGCCATTCGTTTGATATGTCGA GATGACAATCAGTGGTACAGAAGCGGTGAAGGTGGTTGGGGTTCATGGAC ACAAAGCACTTACTGTCCTGCTGGCTACAAAATTGTTGGTCTTCAAACAC AGATCGAAAGTGACCAAGGGAGTGACGACGATACTAGTTTGAATGGTGTT CGATTGTTGTGTCGATATTTTGGATAGGGCAATGGCGTGATACAGATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031364XLOC_031364Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049411-exon-scaffold_158-1575043694:18241..18378TCONS_00049411-exon-scaffold_158-1575043694:18241..18378Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1575043694:7503..7856TCONS_00049411-exon-scaffold_158-1575043694:7503..7856Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1575043694:6032..6338TCONS_00049411-exon-scaffold_158-1575043694:6032..6338Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1575043694:2241..2375TCONS_00049411-exon-scaffold_158-1575043694:2241..2375Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1575043694:1369..1476TCONS_00049411-exon-scaffold_158-1575043694:1369..1476Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1575043694:887..1047TCONS_00049411-exon-scaffold_158-1575043694:887..1047Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1575043694:329..576TCONS_00049411-exon-scaffold_158-1575043694:329..576Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1510915933:18241..18378TCONS_00049411-exon-scaffold_158-1510915933:18241..18378Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1510915933:7503..7856TCONS_00049411-exon-scaffold_158-1510915933:7503..7856Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1510915933:6032..6338TCONS_00049411-exon-scaffold_158-1510915933:6032..6338Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1510915933:2241..2375TCONS_00049411-exon-scaffold_158-1510915933:2241..2375Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1510915933:1369..1476TCONS_00049411-exon-scaffold_158-1510915933:1369..1476Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1510915933:887..1047TCONS_00049411-exon-scaffold_158-1510915933:887..1047Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1510915933:329..576TCONS_00049411-exon-scaffold_158-1510915933:329..576Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1491911889:18241..18378TCONS_00049411-exon-scaffold_158-1491911889:18241..18378Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1491911889:7503..7856TCONS_00049411-exon-scaffold_158-1491911889:7503..7856Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1491911889:6032..6338TCONS_00049411-exon-scaffold_158-1491911889:6032..6338Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1491911889:2241..2375TCONS_00049411-exon-scaffold_158-1491911889:2241..2375Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1491911889:1369..1476TCONS_00049411-exon-scaffold_158-1491911889:1369..1476Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1491911889:887..1047TCONS_00049411-exon-scaffold_158-1491911889:887..1047Clytia hemisphaericaexon
TCONS_00049411-exon-scaffold_158-1491911889:329..576TCONS_00049411-exon-scaffold_158-1491911889:329..576Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_158supercontigscaffold_158:329..18378 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.521732 0.254385 0 0 0 0 0.00450841 0.640241 0.81271 2.1564 0 0.566652 0 2.05156 1.19575 0.583043 0 0 0 0 0 0 0 0 0.654348 1.24982 0 0 0 0
Blast
BLAST of TCONS_00049411 vs. Swiss-Prot (Human)
Match: VMO1 (Vitelline membrane outer layer protein 1 homolog OS=Homo sapiens GN=VMO1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.104e-17
Identity = 62/163 (38.04%), Postives = 82/163 (50.31%), Query Frame = 1
Query:  952 GLWGSWRSWEYCPKGTWVVKLQTNIESHQG-DGDDTALNAISLRC--NDDVGAT--IKSGSTNWGTWQAESQKCINGFY--GGMLKFESSQGSDDDTSTNAIRLICRDDNQWYRSGE--GGWGSWTQSTYCPAGYKIVGLQTQIESDQGSDDDTSLNGVRLLC 1413
            G WG W   E CP G +       +E  QG  GDDTALN I L C   + +G T  ++S S +WG W +E   C  G Y     L+ E+     D+T+ N +R  C D  +    G   G +G W  S +CP G    GLQT+I+  +G  DDT+LN  RL C
Sbjct:   42 GPWGDWAWPEMCPDGFFASGFSLKVEPPQGIPGDDTALNGIRLHCARGNVLGNTHVVESQSGSWGEW-SEPLWCRGGAYLVAFSLRVEAPTTLGDNTAANNVRFRCSDGEELQGPGLSWGDFGDW--SDHCPKG--ACGLQTKIQGPRGLGDDTALNDARLFC 199          
The following BLAST results are available for this feature:
BLAST of TCONS_00049411 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VMO11.104e-1738.04Vitelline membrane outer layer protein 1 homolog O... [more]
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