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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049411 ID=TCONS_00049411|Name=TCONS_00049411|organism=Clytia hemisphaerica|type=transcript|length=1451bp TCATGACAGAGGAACTGAACAATCTCCTATTCATGAGGACGTGTAAAAAC TATTCAAAATTCAAACTCATTGAAAGTTTAAAGGCTGAAAAAATGTGGAG CTTTATGATAGTCGTTTGCGGAGTGTTTTTTTCGACAGTTTCAGGTGGAC AAATATATCCTTCAAATGAAGTACAAAGTGTAGCTTTGAATTCAGATTTC CACAAAAATTGGACAATTCAAACAGCACCAAATGAAGAAGCTAAATCAAT TATTCTTTATTATCACAGTGGCGAAAAGGATCCTAAAGTAGCTTGGCACG GAAGTGTCACCAAATTGGGAAAATCAACATTCAACAGATcattaaatgtc aatattataGAAAATACTGAAGTTGTAGTTGAATTCTCAAACATTCAAGA AGCCATGGTTTTATATTTGATGGTTCATTTTGTAGATGACAAGAGCGGGG AAATGCATGCTTTTTACTCAAACGTCAAGATTGTTCTAAAAGTCAATGGG GAATGGGCAAATTGGGGAAGTTGGAATGCATGTAGGTATAGGTATATTGA CCACCTAAGTCGCTGTGAGAAATTTCAGAGACCTCTTAGATGCATAAAAG GTATTTGCAATTTATCTCTTTGTTCTAGTGGATGGTGGTTGGTCTAGCTG GAGTGGTTTTTCTTCTTGCACACTAAGTTGTGGAAGTGGTACGCAGTATC GAACACGAGCTTGTGATAATCCAGCAAGTCAGTACGGAGGAAAGCATTGT GAAGGCTATGAACGAGAAGAAAAATCATGCAATACCAATCCATGTCCTGC TTGGTCAAGTTGGTCATGTCAACATTGTTcaaagacagccttacgaacaC GCACGTGTCATCATGGATGTTCTGGCAAAACGACCGAAACTAAAGAAATG TGCCAAATTGAATCTTCATGCTTCCCTGACAAAGttaTAAGCTACAACAC TGGTTTATGGGGCAGTTGGCGTTCATGGGAGTATTGCCCAAAAGGAACCT GGGTTGTCAAGCTACAAACAAATATCGAAAGCCACCAAGGAGATGGCGAT GACACGGCATTAAATGCAATCTCTTTAAGATGTAACGATGATGTTGGCGC TACCATCAAAAGTGGATCCACCAATTGGGGCACTTGGCAAGCCGAGTCAC AAAAATGTATTAATGGATTTTACGGTGgaatgctaaaatttgaaagCTCC CAGgggTCTGATGACGATACTTCGACCAATGCCATTCGTTTGATATGTCG AGATGACAATCAGTGGTACAGAAGCGGTGAAGGTGGTTGGGGTTCATGGA CACAAAGCACTTACTGTCCTGCTGGCTACAAAATTGTTGGTCTTCAAACA CAGATCGAAAGTGACCAAGGGAGTGACGACGATACTAGTTTGAATGGTGT TCGATTGTTGTGTCGATATTTTGGATAGGGCAATGGCGTGATACAGATAA T Run BLAST on NCBI transcript from alignment at scaffold_158:329..18378- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049411 ID=TCONS_00049411|Name=TCONS_00049411|organism=Clytia hemisphaerica|type=transcript|length=18050bp|location=Sequence derived from alignment at scaffold_158:329..18378- (Clytia hemisphaerica) TCATGACAGAGGAACTGAACAATCTCCTATTCATGAGGACGTGTAAAAAC
TATTCAAAATTCAAACTCATTGAAAGTTTAAAGGCTGAAAAAATGTGGAG
CTTTATGATAGTCGTTTGCGGAGTGTTTTTTTCGACAGGTATGTGAAATA
TTTTCCAATTCCAAATTATGTTTGTGTTTAGTGGCCCTTGAAAACTAAGA
AAATAGTATTAGCATTTTTTTGGGGGGCATTTAGGACTGCATTTTTTAAA
CATTTTTCTTTCTCGTCGCTCAAAAACCCTATCTCTATCCTGTTTCGTAT
CAAATAAAAAAATTTGAAAATGATAAATTATGATAAGTTCACGTTTTCTG
GCTTACATAATTTTTTTATTCAATTCCTCGCAATCTTGCATTTAAAAGGG
GGATCCCTGTTAAAGAGATCATCAGATAGTTTGCAATATTTGGCCAACAG
AAACCTCCAATGGTCCTGAGTAGAGCCTCCTAATATTTTGGTTTAACTAC
TTTCCAATGTTGAGATTTGAAATCTCTAAAAATACAACCCCTTCTCACAG
ACCCACTTGGACCCCTTCCCACTAGAAAAATCAGCCAGAATATCGTCCCC
GGTGGAAAATTATACTCCAATTTTTGTTCCCACTGAAAATAGTCAATTAA
ATCAATCTTCACTGCCAGATGTTGTGCTATTTTCTCCATCTTCACTGAAT
TTTTAGACTTGAAAATAAAAGAAGTGAAATCCCCAGCCATAAAAAACCGG
GGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAAAAAACCGGGGGGGGGGGGTACTAGG
GCAAGATGGGTTACGGGGATGTTCTGCTGGTCTGGGTACCTTTTCTAACC
TCCACGAGTCCCAGGTAGGGTCGCATAAACACCAAAATAGAAAAATCATT
CCCTCGTAGCAGAGATTTGGGAAAAGAGGATAAGAATTGCTGCGCTATTC
AGCTTTTGTTCTCTAGGCTAGGCAACCTTTTGTTCTATTAAAATATCTGC
GCCCGATCGATTGTTTTAGTTCTGAGCCAATATAGAGGTACAAACAAAAA
ATGGCAGCCGTGGTTGATATCGAAAGTGAAATAAAAATATTTCTAATATC
GGGGGTTTTGGTATTTTTTATAAGCACTTTTCATTTTGGACATGGCGGAT
ACAGTGTTGGTCGAGCCAAAAAGTTTCAGTTTTAGCCAAAATACTTTCCT
CAAGGAATGCTCGAACCAATGTCACAGATTATATTTAAAATTCATTGCAT
TCAAACACAAAACGAAGCTGGTAAAGCTAATATAGTTTTTCATTACTTCT
CTTCTCTTCATTAACAAAAATTAAACACAAATCTTTATTTGGTCGCGTTG
TAATAACAAAAAATAATAATAAACTGGGTTGGTGTAATTTAAGATGCAAG
ATCTAACGATTTACGATTCACGATGCGCGATCCATGTATAAAGTATGCTG
ATTATTCCTAATAATTATCATATAACTTAAATTATATAACATAATTCTAA
AACAATAGCATAATCTTTTCTCGCTTTTGTTTACCACGGTAAATTCATGC
GATAAAAAAGAAATGGAACTATGAATAATTACGACCGTAAAATTATGAAA
AAAAACTAACTTGCATAATGTTGATAATGGAAGCTAACTTGTGAACATAT
TACATTAGACAGAGAGTGAAAGTAAACAATATACAAGAAATATTTCTGCT
CTCCTCAGTTTTAACAATCATAATCGAATATAGGATTTTCTTTCTTAAAG
CAAATAAAAGAATATATTGGCAAACAATATGTTTTGCGGACCGTAATGTA
CGAAGCAAAAAAACTGGTGCTCTATTATGAGAATGAATTTTCTTTCGGTA
AACAATTCCCCTATATTGATTCAAGTTATAAAAAGAGAGAGAGAGTACAG
AAGGTGAATGCACATGGTTTTCACTTTCTTTTTATCTACGACTGATTTAA
ATATAATTTGTATAATCTTACATAAATGATGTTTTCAAAAATAATTGAGT
TTCAGCGAATGAAAGTTTGTAAATTGCCTAAATATTTAATCATAATTTGC
ATAATTACGCATGAATTACCATATTTTATGCACAGATCGCGCATCGTGAA
TCGTAAATCGTTAGATCGTGCATCTTAAATTACACCAACCCTAATAAACT
GGATAAATTTCTGGACTAATTTGATTCTTGTTATGTCAATTTTATTTGTC
CTATTGCTTCCAAAAAGTTACTTAAATAATTGCAAGAAAATTAATTACAA
TAGAAAAACTTTGACTTGATCCTTCCTCACTAAAAGCACCTTGGAAAATA
AACATATATTGTGAAACAGTATATGAAAAATCGGTCACTCTTGGATTTAG
GGGGGGGGGGGCTCACTAATTCCAATAGAGGTGTGATTCTAAGATAAAAA
GCAATTTACGCTTTCAAATAAAATTTTAGAGAGAAAAAGTATGAATATAA
CCAGACTGCTCATCAATGTGGGGGCGTACGGGTTTGTCGGTGTGTCGGTA
TTGACCCTTTTTGCGTCGGTGTTTCGGTGTTTTAAGTAAAAAGTGTCGGT
ATTTCGGTGTTGGACATGCCTTGCGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTCAAACGATCTCATAAA
GTTTTTGAATCTGCATTTCAGCTATTGAATATCTTATCTATACAAGAATT
GTAGCTATGACGAGTAGAATTGTAGCTATGATGAGTAGAATTGTAGCTAT
AATATAGCTATTTTTGGTAGCTACCCTGTCTCATCCTCTTTTTAAAATTG
TGTGTATAATGGTGTTTCTTAACCACTTCTTTACGGGAAATGTTAACTTA
AAAAATCATAATAGTGGGTAACAGGTAAAGAAAGCCAAGTTTGCAGAATT
TCTCGAGGTCTCGAATGCAGCACTCATCAAAAATCAACAATCGTTAAATT
CTTTCATCCGAATAATCCATTAACCTATGATTTAGATGCGTTTTTCAGCA
TTTCTGGCACCTTAAATTTCAAATTTTGCCTCCTCTGGCCAAACCATGGT
TGGCCCTCGAAACATATCTCATTTTGCCTTTCAATATAAAATACTTCCTG
TGGTCCTCCCCTTGCAGAGCTCTCTTTGCAGGCTTTCAATGCCAGTTTAG
TTTCAGCCTAAATCAAACGAACTATTTATCTGGATGGCGTAGTAAAATGA
CTAGTTTTGTGAAAAAGAGAGCGTTTTTAGCCAAATGAGATTTCCTGAAA
TATTTTTCTGTCGGCGCAAACCATACTTGTGCCTTCTTTTACCCACGTGG
CTTTGTTTCAATCGGTTTCCGACCCTGTCTGGTTAAAGCGTTTTAAAGAC
AATGTAATGAGAAACATGCTAAGGCTCCAGGGGTTTCGACCCATGAATGA
TTAGAAAACCCATTTCTTGGGATCGGGAGGGGTTCTCCGTTATAATGTCA
TGCCGTGAATAAGTCACCAAATGAGAGATTACCAAAAAGACCGAAACTTG
TTGATGCTCGCTGTGGTTTTTGTGGTCTTATGCTGACTAACTTTCTCCTT
TTTAGGAGCTCTTTTAAAGCCACTCTATACATACATGAGGCTCTTTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGCAAACTTTCGGGTCGTT
AAAATGTAATTTTAGAAAGAGGACATTCTATTGTTTAATTGAACAATGAA
ATGACGTTGCGCGCGTTCTTTTGTTTTGATGATTTGTTTAAAAAAGTGCT
ATATGTATAAAATGTCAGCATTTTTTAAAACAGCAATTCAGACCTCGCTA
AAAAGCGTCAATGTGTAGAACAAATCGCCTTACAAAATCGCTTTAGGTAC
AAAATTTCAATTTCAAGTATCAACAGCTCATGTATTTTATTTGAGCAGGG
GCTTTATTTTTGGTGCTAAATCGGTATGATATAGGGCGTTTTTAGAGATT
GAAAGTTGAAAGTTGAAAAATTTTCTGTCGGCGCAAACCATGGTTGCGCC
TGATTGTCCAGAAGATTTTACATTTCAAATTACAAGGAAATAAATATCAA
GTTATCATTATACCACCATCTTCGTATAAATAAAAATTCCAAGTTTCTTA
ACTCAAAGATTCCGGGCGCTACTTTCAACCATTCACTGCTCTTACAGATT
ATGTCACTTAATGATGGAGGGCGCAAATAAGGACAAAAAATAGCAGGGGC
GCCTATTTCATAGTTTGCACCATCGAGAAAATTAAGTCAGGTCGCTACTG
AACAAGAGCTCTTTTGCGGCGCCCTTTTCTAACGGTGCTTTCGGCTAAGG
TAGATTTACTTCTAATAACGTTCAAAAAGATCTCTTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTTTGCAAAGATCTTTTAAAAACTTTTTAAATGT
TTTTCTTCAAAGTCAACTAAAGTAAGCACTAAAGTAAAAATAGCACTTTA
AACCCTTCAAAGTGTTCCTTAAAAATTCTGGATTTATTTATCCACTAGTC
GTTGAAAAACTGAGCTTTAAAGATTTGAAACCCTTGAATCGGCGATAGTT
TTCTCCAAGAAAAACTGAACTAGTGCACTACTGCGCTCGTGATATTGAGC
ATTCGTACAGTACTAAGAATAAAAATCTTAAGCTTGCTCTAAAAGACGTC
GGTGTCGGTGTTTTAGGAAAATTTTTTCGGTATTACGGTGATTTAAGAAA
AATCTGTCGGTATTTCGATGTTGGTAACCCTCGTACGCCCCCCACATCAA
TGCTCAAGAAAAGAGTATTTCATAAGATGAATAATTATATAATGTATATG
ATGCATGAAAATAGTCCAGTGTCCAAACTGGAATTTCTATTAAAGCATTT
TTGATATCTATATGGTTGGTTCATTTCTTGTAATTGTAGTCTAGCCTCAT
TCTGGTGTCTTGTTTGGGACTATTTGCGTAATCAAGCAGGAAATCCTGGT
GAAACAGGGATAAAAAGACCTCAATCCAACTACAAACAAACAATGACATC
AGATTCCATTGTTGTTTCCTTTGAGTTAAATATGCTTTTCACCCGTCCAT
CTTATTAGCAGAATTTGTTGGTGTTTGCAAAGATATTGAACCTTGTACTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTGTACGTGACAAATTCAGACAAATTTTAAGCCAATTCTCAT
TGTATACCAACCACGTGAAGGTACAAAATAATTCATGGATCTAGGTTACT
GGGCAGTATGATGGTAACTAACCTGAAAGTATATAATAATGAAAATGGGA
AATTAGGATTTTTGCAGCAAGCTATCATGAACAAATACAGAACACAACAA
ATCTTAATTCCACCGACCACTGACAAAAACGGTGACAAAAACCAGTGAAA
TAAATCTTATATAACTGGACAATCTATTAACCGATCAGAGCCAATCCATT
AATCGGTCAGAGCCAATCTATTAACCGGTCAGAGCAAATCTACTAACCGG
TGAGAGCAAATCTACTAACCGGTCAGAGCCAAACCGGTCATAGTTTTATA
AATTACATAAGTGAAAATATTAGAACTTTGGTTGCAATTTTCTGTTACAT
ACAAAAACTTGAAATTTCAACCCCAAAAAAATGTTTTTCCTCAGTAAAAG
CTAAAAAGACATCAAGGATAATTTAGCGTACTTACCAAATCTAAAATCCA
TTGCCATCAAGCAAGTTTTGCTAGGATAACATTATTTTTTCATCTAAAAC
TAGGAAAAAATACAACATTTTTAGTCGATTTTGCCCATCTGCCCATCTTC
AATCAAAATGCTAAGAAAGTTTGAGGATTTGCCATGTAAAACTAAGCTAT
AGGTTGTCATTTAATCAATCTTACTGCTACGCATAAAAATTATGTTTGCA
ACACAAAAAAAAATATTTTTATTCAACTTAACAAACAAAAAATACACTTT
TTCATACGGCAAGTACAAAACGCCTACTACCTACTACTACTACTACTACT
ACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTAC
TACTACTACTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NACCTACTACCTACTACTTAATACTTACTACCTACTACTTACTACCTACT
GTAAAATAGCTCAAAACGGCTCGAAATTACCTTTAAAATATTCAGCATAT
TAAAATTAGCAAAATCTGAAACTTTGGTGGTAAAAAAGTTAAAACTTCTT
CTTTTAGCGTACTTTGAAGACTTCAAAATATTTTGTCTCTTTTATTTTGT
TTATGACTTTTTCCCGCGCTTTTTCTAGAAAGTTTACAGACGCACTTCTT
TGTAGAAGAGAAAAATATTTCCTTCGCTCAGTTTTATTTATAAGAATCGA
TCAATCTAAAAAGTTAAAATACTTTAAGTAAGTATTTCAAGCTATTTTAA
GTAAGTAGAGCCCTATGCTTCACTGGGTACTTGCTGAAAATCCTTTGACA
TGTTTTTGACATTTATTGACAAAATGACCCTTTTGAACCAAACTATTGAC
ATGGTCGTTAAATATGACCTTTGTAGACTATTCATTTTATGTAGCAAAAA
TTCTTATTGTGCTCAATAAGATGCTTTCAGTATCGCAAGCTAAAAATTTC
TTAAATTTTCAGAAGGAAAATACTACAAAGAGCTGTTTTAGAGGTGTCAA
TTTGACCATGTCAAAGTATGGCAAGTATTGACGAAATGAAATTTTTGATA
AAAATATTGACACAGTTATTGAATATTAAATGCTTCGCAAACCAATTCCA
AGAAATATTTGGCACCATTTGATATGATGCAGATCATACAATAGGATAGA
GATAGATTGACCCCCTATTTATATTACAGAGCCTTTTTTAGACGTTTACG
TGTATTCTTATCGTCTTATAATAAGAGTCATCAGAGGGAGTATGTTTAGG
AAAAAGGAAAGTTCTTATAATAAGAGTCATAAGAGAGAGTAGGTTTAGGA
AAAAAAAAATCAAGATAATGGCCTTTTGTTTTATACTTCAGTATACTTAT
ATGAGGCGAAGAGAATATTTACTCACTACGTAAATATGCTAAATATTCTT
TTAGATAACACTTTTTTCAAGTAAATATAAAGCAAAGACTTGTGTGTTAG
CATTCAGATATTTCAAAACCAATTTTTTTAGAATAGAGATTTAGAACAAG
CGAAGGAGAGTTCTGGTCTGTAAAGTATACAAACTGAGTAGGTAGTAAGT
AGTAAGTAGTAGGTAGTAAGTATATAATATTTCAGCTATCTTTGAAGGAT
GTGCCAAAAAGATCTAGAAGATGCCAATAAAAACCAAAGCTAGGCTAGTC
ACCTACAACCTTTTGCCAACCCAAACCACTTTATTTTGACTCTGAAAGAC
TTTCCAGTAAGGCAATAAACTAGCTAAAAATAAAAAGGTCCCATTCCACA
TCCAATTTTAGCATGCCTGCTTCCACCATCTTTTTCTCAAAAAATAAAGC
ATGCAACAGCAGATTTTTTTGTCAGTGGAAACCCCAAAAGATCGTTATTT
GTTTTTCAGTTGTTTATATAAGTAGGACCCCCTCCAAAGGAGTAAATTCA
GACAGTTTTTTTTGAACTGTTTTAATACTGCACATAACGCCATTTTTTCG
CAGTACCTTCTTGGCCAAGTTGTTGCCTAGCCTAGCGACTTCAGACGACG
CCGAATTCAATGGTCAACAATGAGAAAACAGCGAGCGGCAGCGGTGATTC
TTATCCTATTTTCCCAAATCTCTGCTCGTAGGGTGCCTTTTTTTGGAAAA
TTTGGGGAAAAAGTAGAAAATTTGAGAAAATTTCGGAGTTTCAGTTCCAT
TCAGGGTCACTTTTTTCGCAAATTTCGAGTCCCACGTAGGATCCAAATAT
AATCTTTATCGTTTTATTTTAGTTTCAGGTGGACAAATATATCCTTCAAA
TGAAGTACAAAGTGTAGCTTTGAATTCAGATTTCCACAAAAATTGGACAA
TTCAAACAGCACCAAATGAAGAAGCTAAATCAATTATTCTTTATTATCAC
AGTGGCGAAAAGGATCCTAAAGTAGCTTGGCACGGAAGTGTCACCAAATT
GGGAAAATCAACATTCAACAGATCATTAAATGTCAATATTATAGAAAATA
CTGAAGTTGTAGTTGAATTCTCAAACATTCAAGAAGCCATGGTTTTATAT
TTGATGGTTCATTTTGTAGATGACAAGAGCGGGGAAATGCATGCTTTTTA
CTCAAACGTCAAGATTGTTCTAAAAGGTTTATTTAAAGCATACTCACAAC
TTTTGGAAGTGAACAGCACCCGGGGGACACTCGATTTCTAAATGACGACA
TATGTGCCGCCAAAAAATGACTTTAAATAAAATCGACTACCTCAAAAGGT
CATAAACTTTTGAAATTTGGACTAAAATTTGAAAAGTTTGGCTGAAATTT
TGGGTGACATCAAAAAATGGACAAAATTTTCGAAATGTAGTCTCTCTAAG
AGTCGATTTTCCAAAGATTTATTATACACTGGATAAACGACTCATAAAAC
GATGGAGAGCGATCATTGTATTTCCTTTGTTTCAGAAAACAATTGATTTT
CTAGCTTTGCCCGCAAAAGACAACTGTCATGGCGGCTCGAAGATGTCTGA
TTTTTAAAAATGTTTATCAGAAAAAAAAGTTGAAAGTAAGGCTAGTATTC
CAACCCGGATACATTTGTGAAATCTAATGTGAGAAAAACATCATTAGACA
AGAAATTCAGACAAAATGCTTATAGTGACACAAAATTTTCAATTGAAAAT
ATCTTTCCAAGACTGTCCCCAGAAGAGCTGAAATTAACATACATAAGACT
TGAGTGTCTTGGCTCCACTGTGATATAAAAATCCTTTGGAGGCATGTGGT
GGCGAGGTGGTTTTTTTGAGGTTGAAGTTTGAAAATTTCCGGTGTCAACA
TTAAATTTCTTATACACAACACGTCTTTTGCAACTTTCTCATAGCTTGAA
ACGTCATAACGACTTATAATTATCATTAAGTGGAAGAATCTGATTCTCAC
AGGAAAGTTTTAAGTCTCTTTTGGGAATTGGATAAGTGATTTTCGATAAA
AAATGCAATAAAAATGCTTCGAAAAATCATTTAATGAGGGAAGGAGAGTG
AACAATAATATCACTACTGCGGACATAGCNAAAATGCTTCGAAAAATCAT
TTAATGAGGGAAGGAGAGTGAACAATAATATCACTACTGCGGACATAGCT
AGTACACGAGAAATCGGCAAAAATCTGTTACTTTTATATCCAGTGTATAA
TAAATCCTTAAATTTTCAAACTTTGGCTTGGACATACCCGTCATCTCCTA
AACCTAGTACCCCCGGATCGATTTAGAGAGCTCCATTTACAACGCTTTCG
CATTTCATAAGCCAGCATATTTGCTCTCCTTTTGTTTTAGTCAATGGGGA
ATGGGCAAATTGGGGAAGTTGGAATGCATGTAGGTATAGGTATATTGACC
ACCTAAGTCGCTGTGAGAAATTTCAGAGACCTCTTAGATGCATAAAAGGT
ATTTGCAATTTATCTCTTTGTTCTAGTGGATGGTGGTTGGTCTAGCTGGA
GTGGTTTTTCTTCTTGCACACTAAGTTGTGGAAGTGGTACGCAGTATCGA
ACACGAGCTTGTGATAATCCAGCAAGTCAGTACGGAGGAAAGCATTGTGA
AGGCTATGAACGAGAAGAAAAATCATGCAATACCAATCCATGTCCTGGTA
AGAGTAACCAACGCCATGGGGAAATTAGCGGATTTATCTTCTTACCCAGC
TGGCACACAACGTCGTTTCAACTTTCATCTAACGTTATATGGACATTGTG
AATATTAGAAAAACGTTGAAACGACGTTGTGTTCCAGCTGGGTAAGCTCT
GTGTTTTCTTGACATTGCTTGATATATTTTATTCCCTAGATCCTGGTCAC
TGAGAGTAAAGGTAGATAATGGGCTTTTCCAGAAAAAAATTGAATATGGG
GGTGGAGGATATAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCCCC
CCCCCCCGGACACTATATCCTCCACCCCCCATGTATGAACATTTTCTGGA
AGAGCCCAATAAGAATTTGTCCCATCATCATATTTGTAAACAAAAACTTC
GGTTCCCTGTACAAATTATTTCAGCCAATTCTTCACACTCGTTCGGTTTT
GGATTGAGGAGTGAAATGACAAGAAGTCTCGGTTTCTTCTCAGCCATATA
GCGCAGAATAGAGTTTATAGAGTAATCCATATGATTAGGAGCTTGGAAAG
CATTAACTGCAGCGAATCCCAATGATGTGGTTTATGACTGATCTGGTGAC
GAAAAGTTTTCTTTTTATGTCAATCATTGCCTTTCACTCGTTCAAAACAG
AACCACCTGGCAATGAAACACTTTTCCGATACCTTCAGGTGATCGCCAAC
TCACCTAAGCTTGAAAAGCCTTTTTAAGATACAGTGTGTCCAAATAAAAG
CGGAGAAATTTTTATTTATTTCTTCTCGTTTAATTAGATTATTTTTCTTA
TAAGCATATACTTTATAAGAATCAAATCAATAACTCTCGATAGATGGTGA
TATACCTTTGGGAATTAGTTTTTACAAAGTAAACGAGGGATGGCGCACAA
TATGAACATATTTATTTTTCTTATAAGCATATACTTTATAAGAATCAAAT
TAATAACTCTTGATAGACGGTTATGTACCCTTCGGTTACNTTACAAAGTA
AACAAGGGATGGCGCACAATATGAGCATATTTATTTTTCTTATAAGCATA
TACTTTATAAGAATCAAATTAATAACTCTTGATAGACGGTTATGAACCCT
TCGGTTACTAGAAAATTTTTTGACCCCATCTAGGTTTGTCCACCCCCTGT
ATGGTTATAAAATAGAACAACCCATTGCTGAAACCATAATCGACCAACAA
ATAAAGGGCAGAATCGTCAATGGACCCGTAATTAGACGCACCCGAAAATT
CACGACAAAAAGAATAGAGCGCTCTTCTCTTGATTCCAGACGTCTTGAAG
AAATCAAGGATATCAGCGGTGTCTTCCGTGGTCTACGGAGATATGTCAAA
ACCGTGGGTATTGAAGACAATACAGGAAGCGTCGAATGTTCTGCTGGTAC
TTAATCGATTCCGAATCTCTATTTCTTTACGAAGAATATTTTGAGGTGGG
CTTGGCGGCAATAAAGGTGAAATGGATGCAAAAAGATCTTCGAACTGGGT
GGAAGCCTGGCTGGTATTCTGCTGTTGTCCAATCATTTGATATTCAAAAC
GACACCATCAACATCATTTAAAATTTAGAACCTAACGTGATATACTCAGT
GGAAATATCCCCTTGCATTTCGTCTTGCAGAATCAAATTAGCTGCGAAAT
GATTTAATTAACTAGCCAATTATACTTTTCNCAACATTATTTACAATTTA
GAACCTAACGTGATATACTCAGTGGAAATATCCCCTTGCATTTCGTCTGG
CAGAATCAAATTAGCTGCGAAATGATTTAATTAACTAGCCAATGTATACT
TTTCCCTATATTGCATCCATTTTCCAGTCCCCACCTAGCCATAACTACTT
CATCTTTTTCATTTTTAAATCAAAAAACTTTTGAGCTTGTTTGTTTACAT
GCTTGGAGGTCTTTTTCTATGCTCGCTAGCCGGAAATCTCTTTTTGGTGA
TTCCCGCCTCTTTTCGGTCTTTGACTAATTAACTAATTAACTAATTAACT
AAGATTATAAAATTTACTTGCTATACTTTATCATTTCTCCTTATTTTTAA
AAACAGTAAAGTAANAATCAAGGATATCAGCGGTGTCTTCCGTGGTCTAC
GGAGATATGTCAAAACCGTGGGTATTGAAGACAATACAGGAAGCGTCGAA
TGTTCTGCTGGTACTTAATCGATTCCGAATCTCCATTTCTTTACGAAGAA
TATTTTGAGGTGGGCTTGGCGGCAATAAAGGTGAAATGGATGCAGAAAGA
TCTTGGAACTGGGTGGAAGCCTGGCTGGTATTCTGCTGTTGTCAAATCAT
GTGATATTCAAAACGACACCATCAACATTATTTACAATTTAGAACCTAAC
GTGATATACTCAGTGGAAATATCCCCTTGCATTTCGTCTGGCAGAATCAA
ATTAGCTGCGAAATGATTTAATTAACTAGCCAATGTATACTTTTCCCTAT
ATTGCATCCATTTTCCAGTCCCCACCTAGCCATAACTACTTCATCTTTTT
CATTTTTAAATCAAAAAACTTTTGAGCTTGTTTGTTTACATGCTTGGAGG
TCTTTTTCTATGCTCGCTAGCCGGAAATCTCTTTTTGGTGATTCCCGCCT
CTTTTCAGTCTTTGACCAATTAACTAATTAACTAATTAACTAAGATTATA
AAATTTACTTGCTATACTTTATCATTTCTCCTTATTTTTAAACTATTTTT
AAAAACAGTAAAGTAAAATTTTTATAATTTTAAAAAGCATCGACGTAAAA
AGAAATCACCTTTTTATTGGAAATCTAATTGTTTACGCGCTTCTTAAAGT
GTTGGATTATAGGAATCAGCTGGCGATTCTTGATGTTACGTTTTATTCTT
GCTTGACTAGACCCAAATCATTTTTTATCAGCAAAGTCAGTTAGGGTAAA
CAAAATCATGGTATTCCATAGGGTTAAAGAATTTTCTAATCGGAATTACA
TAGAGGTAAGGGATTTGTAGATCCGGAATTCCATAGGAGCAGATGATTTG
AAGTTCCAGAATTCCATAGGGGTAAGGGAATTTTCGGTCCGGAATTCCAT
GGGGGTGCACCTAAAAAAAGGAACCTCCTCAACAGGGGGGTACGGACTTT
ATCTGGAAAAGCCCATTGCAGAAATTGAAAATATGTTTTCTTCAGTAGAT
CAGCTTTTGCCTCTAAGGTTTCCCTGAGCTTTCATGGCGTTTGAATTTGA
AGACTGTATTATGATTCATGATCATCCAAAAATTTTGAAGCCGCTTCGGA
TGTTGTCAATATTTTGGGTATTTTTGTCCATTTTCCTAAAAGAAAATGGG
TATTTTAGAGTCCACGGAGCCTTAAAATGTTCTTAACTTGTTCTTAATAT
TTTGGCCATTGAAGCCTTTTGTTCTTATATAGTTTGTTCTTACTAGATTT
TTTGGCAAGTTTTTTAAGCAAAGTATAACTATTATCCTGCCGCTCGTACT
GTCTTCAAGAAAATTGGGAACTGATTTCTCTTTATCTTGTATTCTTTTAC
CAGCTTGGTCAAGTTGGTCATGTCAACATTGTTCAAAGACAGCCTTACGA
ACACGCACGTGTCATCATGGATGTTCTGGCAAAACGACCGAAACTAAAGA
AATGTGCCAAATTGAATCTTCATGCTTCCCTGACAAAGGTAATGCAACCC
TGTCTCAAGTGAAAGTGCTTCTTAGTTTTTTAAAGAGGAAAACAAGTACT
TGACAGGGTTATTATTCACTGGGGACGAGTTTAGCCGCATTCGGTGAAGG
GTTTTTACGTCAAATACTGAATGTGGATTTTGTTAATTTCAATTATTGCC
CCGCAGGGGATTTTGTTCCTTCACGTAGTGGACTTGCTCGCCAGAAAAAT
ATTCATGTCGTTGATGTTTCTTCCGATTCTGAGCGGACCGCCGCTGTTAA
AAAATGGTCACGCGCACCTATTGTTTTGTCTACTTTGTTGCGACTTGTAT
TGATTTTAGTTCTATTCTATTCTTCTATTTATTAAATTCTATATTCTTAC
AAAGTAAAACAGGGACAGTGCACAATATGTGCATTATTTTTCTTATAAAC
ACAAACTTTATTAGAATCATATCAATAACTCTTGATAGACAGCCATATAC
TTGGTAATTAGTTCCTACAAAGTAACAACAACAACAAGGGATATTTAAAA
GATATTTTACTGTGTGCGCCAAGCTGTACACCTCGTTTCTTTTTTATCAG
CCAATCAGTTCATTCTCAATTATGAATGCGTTCGCGAGGCATTCATAGCG
CGACCGCTACTTGCTAGTATAACCCAAATAGAACGGTCGTAGCGATAATT
ACTTTTGGAAGTTGCCACTGCCAATTTTCTTTAGCTCAAATTTACTTTTC
ATTCAATCTACACACATATACCATCTATCTACACTAAAAAATTATTTTTT
AGTTATAAGCTACAACACTGGTTTATGGGGCAGTTGGCGTTCATGGGAGT
ATTGCCCAAAAGGAACCTGGGTTGTCAAGCTACAAACAAATATCGAAAGC
CACCAAGGAGGTATAGAATCTTTCATAAAAAGTTGTTTCCGAGAATTTCA
TGGCATGGTTTTTTAAAATCTCTTCAGTTCCTGCCAAGTATAATTTTCAT
CGTTCTTGAAATTAATCAAAATACAAAATTATCTCGGGTTATAAATTGGT
TCTCAGGGCAAATTTTCTTATGAAATGGGTTCTATGGTAAATACATGTGT
TTTATATCTTATCTTAGAGCAGTTACAACTCTAGATAGAGAGATAGGAAT
TTACTACTCACTATAGCTAGATACTGATAGTTTTTAATAAAGTTTTTCTC
TTTGTTCAATGTATGTCTCTTTTTATCCCAGATGGCGATGACACGGCATT
AAATGCAATCTCTTTAAGATGTAACGATGATGTTGGCGCTACCATCAAAA
GTGGATCCACCAATTGGGGCACTTGGCAAGCCGAGTCACAAAAATGTATT
AATGGATTTTACGGTGGAATGCTAAAATTTGAAAGCTCCCAGGTAATACA
CATTGGACTTCTGTAACTTATCATCTCCGAAGAATCAAAATATCATTTTA
AGGCTTTTAAATTTTCCAGCAGTCAATAATTTCGGTTTCTCAAGAACCAA
GAACTCAAATTTACCCCTGTTTAAGAGGTCATCTTATTGAGTTGATATTT
TTAGAGGTTAGATACCATTACACCTCCTTAATAAAGTTGATTACATAGAT
CCTTCTACTCTTCTTATCAAAATATTTATTCAAATCCCAACCCCTCCCAC
GTGCTAAAATTACCTTGTAAGAAATAAATCTTATTTTATAATGAATTTTC
AGGGGTCTGATGACGATACTTCGACCAATGCCATTCGTTTGATATGTCGA
GATGACAATCAGTGGTACAGAAGCGGTGAAGGTGGTTGGGGTTCATGGAC
ACAAAGCACTTACTGTCCTGCTGGCTACAAAATTGTTGGTCTTCAAACAC
AGATCGAAAGTGACCAAGGGAGTGACGACGATACTAGTTTGAATGGTGTT
CGATTGTTGTGTCGATATTTTGGATAGGGCAATGGCGTGATACAGATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00049411-exon-scaffold_158-1575043694:18241..18378 | TCONS_00049411-exon-scaffold_158-1575043694:18241..18378 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1575043694:7503..7856 | TCONS_00049411-exon-scaffold_158-1575043694:7503..7856 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1575043694:6032..6338 | TCONS_00049411-exon-scaffold_158-1575043694:6032..6338 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1575043694:2241..2375 | TCONS_00049411-exon-scaffold_158-1575043694:2241..2375 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1575043694:1369..1476 | TCONS_00049411-exon-scaffold_158-1575043694:1369..1476 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1575043694:887..1047 | TCONS_00049411-exon-scaffold_158-1575043694:887..1047 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1575043694:329..576 | TCONS_00049411-exon-scaffold_158-1575043694:329..576 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1510915933:18241..18378 | TCONS_00049411-exon-scaffold_158-1510915933:18241..18378 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1510915933:7503..7856 | TCONS_00049411-exon-scaffold_158-1510915933:7503..7856 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1510915933:6032..6338 | TCONS_00049411-exon-scaffold_158-1510915933:6032..6338 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1510915933:2241..2375 | TCONS_00049411-exon-scaffold_158-1510915933:2241..2375 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1510915933:1369..1476 | TCONS_00049411-exon-scaffold_158-1510915933:1369..1476 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1510915933:887..1047 | TCONS_00049411-exon-scaffold_158-1510915933:887..1047 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1510915933:329..576 | TCONS_00049411-exon-scaffold_158-1510915933:329..576 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1491911889:18241..18378 | TCONS_00049411-exon-scaffold_158-1491911889:18241..18378 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1491911889:7503..7856 | TCONS_00049411-exon-scaffold_158-1491911889:7503..7856 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1491911889:6032..6338 | TCONS_00049411-exon-scaffold_158-1491911889:6032..6338 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1491911889:2241..2375 | TCONS_00049411-exon-scaffold_158-1491911889:2241..2375 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1491911889:1369..1476 | TCONS_00049411-exon-scaffold_158-1491911889:1369..1476 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1491911889:887..1047 | TCONS_00049411-exon-scaffold_158-1491911889:887..1047 | Clytia hemisphaerica | exon |
TCONS_00049411-exon-scaffold_158-1491911889:329..576 | TCONS_00049411-exon-scaffold_158-1491911889:329..576 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_158 | supercontig | scaffold_158:329..18378 - |
Blast
BLAST of TCONS_00049411 vs. Swiss-Prot (Human)
Match: VMO1 (Vitelline membrane outer layer protein 1 homolog OS=Homo sapiens GN=VMO1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.104e-17 Identity = 62/163 (38.04%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 952 GLWGSWRSWEYCPKGTWVVKLQTNIESHQG-DGDDTALNAISLRC--NDDVGAT--IKSGSTNWGTWQAESQKCINGFY--GGMLKFESSQGSDDDTSTNAIRLICRDDNQWYRSGE--GGWGSWTQSTYCPAGYKIVGLQTQIESDQGSDDDTSLNGVRLLC 1413
G WG W E CP G + +E QG GDDTALN I L C + +G T ++S S +WG W +E C G Y L+ E+ D+T+ N +R C D + G G +G W S +CP G GLQT+I+ +G DDT+LN RL C
Sbjct: 42 GPWGDWAWPEMCPDGFFASGFSLKVEPPQGIPGDDTALNGIRLHCARGNVLGNTHVVESQSGSWGEW-SEPLWCRGGAYLVAFSLRVEAPTTLGDNTAANNVRFRCSDGEELQGPGLSWGDFGDW--SDHCPKG--ACGLQTKIQGPRGLGDDTALNDARLFC 199
The following BLAST results are available for this feature:
|