TCONS_00049427 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049427
Unique NameTCONS_00049427
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6304

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049427 ID=TCONS_00049427|Name=TCONS_00049427|organism=Clytia hemisphaerica|type=transcript|length=6304bp
AAATCCATGCTGTGTGCACGTGCTTTTTCTGGTACTGCCCATAAGATGTA
TATGGCATGAAAATCCAAAGTTTTACATACCTCTTGTACAGTTTTTAAGA
GTGACTATTAATTTAACATCCTCCAAGGATAAGGGTCAACATAAATatac
cttttgctaatcaggatgTCATTTTGAACaagtaaaaactccagcattcA
GGCATTAACTGTACTTACTTTACTTTTGACGAAGCATCACATCTCAAAAT
GCTGAGACTTCACCCATATTTGATTAACTTGTCTTTTCCATTCTACTCTG
TCATTTGCGATCATGTTTAAGGTGTTTAAGGTCTATTCCAGTGTCCTCTT
TAATCTCGTCGTCCTTCCATCTGTCGTCCATCGCTTTGGTGGCCTCCCTG
CCTCTCGCCTCAGCCTTGCTTCCTCTTCTTTGTGAAATCATTTTGGAGAG
CTCTTTCGCTCTTTCAACAAGGCTGTTGTCATCAATTTGACCATACCACG
AAAGTCTGCTgacgctgtggtatagtggtcattgatcttggttgctgcac
aggcaaCTGAGATTCGATTCCCACTTGCATTGCAGCAgctcacttggcaa
gtgaatgaacttTCACCTGGGTCAACCcttaggtggccgcatctttttTG
ATTAGcttagcttttttattttgttgattccGCCTCTTGTATCATTTTCA
GATGTGTTAAAaaggtaaataaatacttacttacttacacccatgccatg
tgaggggaattgggtagttagttcaaggtgctgacagggCGCTAATTaaa
aagcatctatagttgcgaaaatgggcctcaaagcctcctgcaactcaacc
aaatagaaatagaagtctttgttttttcacaaagttttgTATGTGTATGG
TTTTGTCCAGGACTCTAACCCCAAGCAAATTTTGGAGACAGTTGTTTTCA
AATACTAAGTCTGTTGGAGTCTTTCTTAGTGAGTGTCCATGTAGAACAAA
CGTATGTAGCTATGGGGTAAATAAGGGCATGAAGAAGTTTCGTTTTAAGT
TCCATAGCTAAGTTTCTGTTTGACGTTCTTGTATAAATTCCCGAAGGCTG
TGTTGTGTGTACATGCTAATGCAAGTCGTTTCTCGATACCTTTGGAAGTT
CCCGGAATAACTATGATCCCAGGAAAGTAAATTACTCAACTTTTTCGACC
AGCTTGCCATCAATCCagatttgtttttcattttctggggAGAGGATTTT
ACATTTGTCACCATTAATTTTGAGTCCATATTTTGCACATGCTGATTCCA
GTTGGTTGGTAGCAAGTTTAAGAGGAAGAAAAGTTACGGTTATTAGGGTT
GTATTGTCTGCATATCTAACATTGTAGCATAATTCGTCATCAAACATAAT
ATTTCTTGAAGATTAAACCACTCAGTAAGCCAATTGTTAATAATAACTGA
ACAAGTCTTATTGTCGTACATGGTTTTGACGGTGTTGACAATATTGTTTG
AGACACCAATTATACGCCGACGACTTAGAACTTGCATTCAAAAGTATTTC
AGACTTAGAAAAAGGACTGAAAATCCTTAATGAAACATTTGTTCGTGTTC
ACCTCCAAATATACGCcaagaaaaccaaaaaatgaTAATAAATCTCAAGT
CTCAAAACCAAGATGAGTATCCTCAATCTATCGTCACGCTTAATGATAAA
GTTATTGAAAATGTTGAAGTGTTCAGATATCTTGAAGACGACATACACTT
CAATCAACCTTCAACAGGAGATGCAGAGATTGACTTAAGAATAGCTGTTG
CTCAAAACAAGTACAACCAAATGAGTAAAAAACTGCACAATCGAAAGATC
TTCCTGAAAACAAGGGTATATCTCCTAAATACAATGGTGCGCAGTCAGCT
GACATATTCCTGTCAAACGCGGAATAtcactcaacaacaacaacaacgaa
tTCTATCCACCTACAACGAATTCGATCCACCTACATTAATATGCTTTGTA
GGATGGTGAGAGGCGGCTTTGAAAGAAGAATTGATGAAAACACTGAGCAA
ACTTTCCACTTCGTCATGTCAAGTGAAGATGTTTTATGCGTCTGTAAGAC
TGAAGACATCCTTCAATACGTCAAACGACAGCAACAAAACTATCTTGGCC
ATATTGCAAGACAAAAGAACACCAGCATCGTCAAAAGACTGCTTTTCAAC
GACAACGCTAACAAGAAGACCAATCAAAACACTCGAAGATCACGTGCTTG
ATGGTCGGTCGCAGCAGACGAATTCTACAAGGAGgtcttaaagaaaaaga
aaaagaaggataTGGTTGGCCTTCGCCCTAACCACTCAATGTTGGCACCT
GAGAACACGAGCTAAAGAAGAAGTAAGTAAGTAATGGCAAACAACATCTT
CCAGTGTCGAACGCActtttaaaatcaatgaaattgaaGTGTAGATTGAC
ACCACACTCTTTTGCCTTCTATGTAATTTGCCTGACGATAAAAATTGCGT
CTACTGTACCAAATTGGGTCTTACTGGTGGAAGTTTCGGTTCTTTCTCTT
ATTTTTTCAAGGAGGATACGGTTTAACACTTCCTGGTATTGACAGTAATA
AAATTGTAAGGTAGTTTTCAGGGTTACTTGTATCGCCTTTCTTGTAGATT
GGTGTCACCGTCGTTTTGGAGCATTCTGAAGGGACCTCGTTAGTAGATAG
GACTTTATTGAAAAGCTTGTGGAGGACATTGAATGTTTGTCATTGTTCAT
CGCCTTCTTCTGATGCACCATTGTGTCCGGGggcctttttaaatttcata
tgCTTGATTGCTTTTACAACATCTTTCTTCTCTATCTAATTGCTCATTAT
TCAGAGCTGGGATGTCTTATTATTTAAAATGTCCGCCTCTCTTGGGAAGG
CTTTGTTCAAGTGttttttgtaatgttttttcCAAATGGTTAGAATTTCA
GAATTGTTGACTAGTTTTGTTACCTGTTACATCTTTCAGGGCCATCACAg
gttttttttggttttgcttcaagctctttgatattttttaaataattcat
GAGTATCTTGTTTTCTCGAAAGTTATTTTCAATGAGTATTGTCTTCTTTT
CTAGTGCTTTTATTTTCGCTTGTTTCACCGCTTTTTTTACTGCGATATTA
AGAATATTGTAATCTGATCGTATTTTGTCATTTGTAGAGTTCGGAAGCAT
TCTTGTTCGAGCACGTCGTCTCTCCTCACAAAGATTTATTGTTTCTTCAT
CTAGACCATTGATGGGCTTTCTCAATCGTTTTCCAACTGTTTCTTCAGTA
TATATGTTCATTCATAATTTTCGTAAACTTGTTGTATTAGGTCTTCCAAG
GACATTTCATTAGAGTTATCTATTAGTGCGCTGAAAGCTcctcttatttt
tatttcaaaactcttTCTGATATTGTTGTCTTTAAATCTGTTGACGGCGA
ATCTTTTAGAAACTTTGGCaaatgttttcgttttttatgGGAAAGTTTAT
ATTGCATCAATAGTAAGAAGTCGTCCCTATCAATATTAAACGAGTTAAAG
ACTTTTTTTGACAAAACATTTTTGATTATCTGGAGTGATTAAGGAAATCC
AGCTGACTTTGGGTTTGTCCATGTTATTAATCTGTGTAGTGGTTGTTTAT
ATTATAAAAGTCTTAATAAGGGAAAATTCGTTTATTGTACAAAACTGTAG
AAGACAGGTACCGTTGTCACTCAGATTACCAACGCAGAAACGACCAACAA
TGTTGGGCCATACATTATACGATTCAGGGCCAACCTTAGCATTAAATCTT
CAAGTATGATTAATTTGCTGTTACGTGGCAAATTGTTGATATGACCTTGG
AGTAATTCGTAAAACGCATCTGACGGGTGCATACGTTTGATCTGGTTTGA
TAAATAAATAAGGGGTCCGTATTTATTTCGATTTGAACCATCATTAGTCT
CTGCAATATCAACTTATAGCCTTCGAGATTTTCGGCCAAAGATCGGTGCA
AAATTGTTGCTACTTCTTGTCGATGGATCCCTTCTTTTCGTTCCAATTGG
ATGTTAATAAAATTGCCTATTTCGAAAGATTCTGGCATCTGTTGCGCCCA
GTGGGTTTCCGAAATGCCGAGAATATCGATATTTAAACGAGTCATTTCTT
TtagtaaaagttttctttttgcgaaaatcaattttttctgtGTGTGGCTT
ATGTATATCAGGAAAAGAAAAGAGATACTTTATGACCATTTTTTATAGTT
TTTCATTGCATAAATGCTTTGGAAATCTCTTgtgtacatttttatttcag
tATTGAAAAGCCAAACAAAACTTGTTATTaaaataaagttgtaaaatgaT
CAATCGTATTAGTGGATTTATTGACAAACATTTGCAGCTCATCAGGGGAA
TGACAGTAGCGACGGGATGCATAGGAATCATACTGATAACTCGAAGGTAC
CATTTGATGAAAAGATACAGACATGTTTCTGAAATACCCAAAGAATTCAT
CACCAAGAAGGAAGTCCTTCATTGCGTTTTTCGTTAGCTGGTGTTGAACT
GCAAAATGGGTGGTACGAACATTTACAGGAGCTCCAACACAAAAATATCC
TTTTCcaaattttgcagaaaaatgATAAAGAGCTGAAAGgagttttattt
tataaaagaGGTTGGCTATCGAAAGAAATGAATGTGAATGAAGATTTGGT
TGGAAGAGGGCTCGCAATAACACGATGTAACATTCCTTCACCACTAAATG
TGTTCTTATACCAAGAGTTGATGGAGAGGTTACTCAAAGTCGAACTTCAA
GCCGATAAGAAGGGAATCGGGATCTGGAGACGAGAAAGGGAGGAGACTTT
CATTAAAAGATTGATTGGTTGGGTGAAAAGAAAGTTGCAAAAATGAGGAG
CTCTATAAATATCAAACCAAGATTTGTTGGGTCCATCATTGCGAAAGATT
TAAAAGTGAAAGAAGGACGTATTTCATTCCTGTCTGCATCCAGATGCAAT
TACTGCAAACCAACACCCACTCTCAACAACATCATCAACAACACTTTCCT
CAACAACAAATGATGGACAACAATCTCGTCATCAACAGCGAACACCAAAT
GCTTATCGGTAAcgagtttttccaaaaatattctccCATGGCAACCTACA
CAAACAATAACATTCAACTACAACCCAGAATGCATCATTTACCGCTTCAA
CATCAACCCATACATCCGCGACCGCGAAGGCGCCGCTCCAACCACAGCTT
AGTTGCCACCATGGATCCTGAAGCGGTCGCTCGTCGAAATGAACGCGAAC
GGAACCGCGTAAAACAAGTGAACGATGGATTTGATGCTTTGCGTAAGAAA
GTTCCCTTTTTGCCCAATAAAAAGAAACTCTCAAAAGTGGACATTCTCCG
ATGTGCCATGATGTATATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACG
ACCATAATAACACGCACTATCTTACACATGCTCTCGGTATTAAAACCAGA
CCAAACGGGAGTTTTAGTAGTTCAAGTAGCTCATCTAGTGACGATTTGAT
TCTTTTGGAACAGGACTTGGAAGATGATTTACTGGGGCACTGATCCCAta
ttcatttgaaaattagttttttctatttttgtcgGCTTTAAGCCCAATCT
ATTTTCACGTGCTGAACGATGTTTAGTttgtattaaaaagaaattgtaaa
TATGGAGCtgtatatatattttatttatagaattcaaaataaacaaagaa
taCGCAATGAATANCCATGGATCCTGAAGCGGTCGCGCGTCGAAATGAAC
GCGAACGGAACCGCGTAAAACAAGTGAACGATGGATTTGATGCTTTGCGT
AAGAAAGTTCCCTTTTTGCCCAATAAAAAGAAACTCTCAAAAGTGGACAT
TCTCCGATGTGCCATGATGTATATTCGTGATTTGAAAGGCGTGGTCGAAG
AGTACGACCATAATAACACGCACTATCTTACACATGCTCTCGGTATTAAA
ACCAGACCAAACGGGAGTTTTAGTAGTTCAAGTAGCTCATCTAGTGACGA
TTTGATTCTTTTGGAACAGGACTTGGAAGATGATTTACTGGGGCACTGAT
CCCAtattcatttgaaaattagttttttctatttttgtcgGCTTTAAGCC
CAATCTATTTTCACGTGCTGAACGATGTTTAGTttgtattaaaaagaaat
tgtaaaTATGGAGCtgtatatatattttatttatagaattcaaaataaac
aaagaataCGCAATGAATATTCTTTCGTCCTCACTTCAAAAGGGCACATC
TTAT
Run BLAST on NCBI

transcript from alignment at scaffold_159:66892..76530+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049427 ID=TCONS_00049427|Name=TCONS_00049427|organism=Clytia hemisphaerica|type=transcript|length=9639bp|location=Sequence derived from alignment at scaffold_159:66892..76530+ (Clytia hemisphaerica)
AAATCCATGCTGTGTGCACGTGCTTTTTCTGGTACTGCCCATAAGATGTA
TATGGCATGAAAATCCAAAGTTTTACATACCTCTTGTACAGTTTTTAAGA
GTGACTATTAATTTAACATCCTCCAAGGATAAGGGTCAACATAAATatac
cttttgctaatcaggatgTCATTTTGAACaagtaaaaactccagcattcA
GGCATTAACTGTACTTACTTTACTTTTGACGAAGCATCACATCTCAAAAT
GCTGAGACTTCACCCATATTTGATTAACTTGTCTTTTCCATTCTACTCTG
TCATTTGCGATCATGTTTAAGGTGTTTAAGGTCTATTCCAGTGTCCTCTT
TAATCTCGTCGTCCTTCCATCTGTCGTCCATCGCTTTGGTGGCCTCCCTG
CCTCTCGCCTCAGCCTTGCTTCCTCTTCTTTGTGAAATCATTTTGGAGAG
CTCTTTCGCTCTTTCAACAAGGCTGTTGTCATCAATTTGACCATACCACG
AAAGTCTGCTgacgctgtggtatagtggtcattgatcttggttgctgcac
aggcaaCTGAGATTCGATTCCCACTTGCATTGCAGCAgctcacttggcaa
gtgaatgaacttTCACCTGGGTCAACCcttaggtggccgcatctttttTG
ATTAGcttagcttttttattttgttgattccGCCTCTTGTATCATTTTCA
GATGTGTTAAAaaggtaaataaatacttacttacttacacccatgccatg
tgaggggaattgggtagttagttcaaggtgctgacagggCGCTAATTaaa
aagcatctatagttgcgaaaatgggcctcaaagcctcctgcaactcaacc
aaatagaaatagaagtctttgttttttcacaaagttttgTATGTGTATGG
TTTTGTCCAGGACTCTAACCCCAAGCAAATTTTGGAGACAGTTGTTTTCA
AATACTAAGTCTGTTGGAGTCTTTCTTAGTGAGTGTCCATGTAGAACAAA
CGTATGTAGCTATGGGGTAAATAAGGGCATGAAGAAGTTTCGTTTTAAGT
TCCATAGCTAAGTTTCTGTTTGACGTTCTTGTATAAATTCCCGAAGGCTG
TGTTGTGTGTACATGCTAATGCAAGTCGTTTCTCGATACCTTTGGAAGTT
CCCGGAATAACTATGATCCCAGGAAAGTAAATTACTCAACTTTTTCGACC
AGCTTGCCATCAATCCagatttgtttttcattttctggggAGAGGATTTT
ACATTTGTCACCATTAATTTTGAGTCCATATTTTGCACATGCTGATTCCA
GTTGGTTGGTAGCAAGTTTAAGAGGAAGAAAAGTTACGGTTATTAGGGTT
GTATTGTCTGCATATCTAACATTGTAGCATAATTCGTCATCAAACATAAT
ATTTCTTGAAGATTAAACCACTCAGTAAGCCAATTGTTAATAATAACTGA
ACAAGTCTTATTGTCGTACATGGTTTTGACGGTGTTGACAATATTGTTTG
AGACACCAATTATACGCCGACGACTTAGAACTTGCATTCAAAAGTATTTC
AGACTTAGAAAAAGGACTGAAAATCCTTAATGAAACATTTGTTCGTGTTC
ACCTCCAAATATACGCcaagaaaaccaaaaaatgaTAATAAATCTCAAGT
CTCAAAACCAAGATGAGTATCCTCAATCTATCGTCACGCTTAATGATAAA
GTTATTGAAAATGTTGAAGTGTTCAGATATCTTGAAGACGACATACACTT
CAATCAACCTTCAACAGGAGATGCAGAGATTGACTTAAGAATAGCTGTTG
CTCAAAACAAGTACAACCAAATGAGTAAAAAACTGCACAATCGAAAGATC
TTCCTGAAAACAAGGGTATATCTCCTAAATACAATGGTGCGCAGTCAGCT
GACATATTCCTGTCAAACGCGGAATAtcactcaacaacaacaacaacgaa
tTCTATCCACCTACAACGAATTCGATCCACCTACATTAATATGCTTTGTA
GGATGGTGAGAGGCGGCTTTGAAAGAAGAATTGATGAAAACACTGAGCAA
ACTTTCCACTTCGTCATGTCAAGTGAAGATGTTTTATGCGTCTGTAAGAC
TGAAGACATCCTTCAATACGTCAAACGACAGCAACAAAACTATCTTGGCC
ATATTGCAAGACAAAAGAACACCAGCATCGTCAAAAGACTGCTTTTCAAC
GACAACGCTAACAAGAAGACCAATCAAAACACTCGAAGATCACGTGCTTG
ATGGTCGGTCGCAGCAGACGAATTCTACAAGGAGgtcttaaagaaaaaga
aaaagaaggataTGGTTGGCCTTCGCCCTAACCACTCAATGTTGGCACCT
GAGAACACGAGCTAAAGAAGAAGTAAGTAAGTAATGGCAAACAACATCTT
CCAGTGTCGAACGCActtttaaaatcaatgaaattgaaGTGTAGATTGAC
ACCACACTCTTTTGCCTTCTATGTAATTTGCCTGACGATAAAAATTGCGT
CTACTGTACCAAATTGGGTCTTACTGGTGGAAGTTTCGGTTCTTTCTCTT
ATTTTTTCAAGGAGGATACGGTTTAACACTTCCTGGTATTGACAGTAATA
AAATTGTAAGGTAGTTTTCAGGGTTACTTGTATCGCCTTTCTTGTAGATT
GGTGTCACCGTCGTTTTGGAGCATTCTGAAGGGACCTCGTTAGTAGATAG
GACTTTATTGAAAAGCTTGTGGAGGACATTGAATGTTTGTCATTGTTCAT
CGCCTTCTTCTGATGCACCATTGTGTCCGGGggcctttttaaatttcata
tgCTTGATTGCTTTTACAACATCTTTCTTCTCTATCTAATTGCTCATTAT
TCAGAGCTGGGATGTCTTATTATTTAAAATGTCCGCCTCTCTTGGGAAGG
CTTTGTTCAAGTGttttttgtaatgttttttcCAAATGGTTAGAATTTCA
GAATTGTTGACTAGTTTTGTTACCTGTTACATCTTTCAGGGCCATCACAg
gttttttttggttttgcttcaagctctttgatattttttaaataattcat
GAGTATCTTGTTTTCTCGAAAGTTATTTTCAATGAGTATTGTCTTCTTTT
CTAGTGCTTTTATTTTCGCTTGTTTCACCGCTTTTTTTACTGCGATATTA
AGAATATTGTAATCTGATCGTATTTTGTCATTTGTAGAGTTCGGAAGCAT
TCTTGTTCGAGCACGTCGTCTCTCCTCACAAAGATTTATTGTTTCTTCAT
CTAGACCATTGATGGGCTTTCTCAATCGTTTTCCAACTGTTTCTTCAGTA
TATATGTTCATTCATAATTTTCGTAAACTTGTTGTATTAGGTCTTCCAAG
GACATTTCATTAGAGTTATCTATTAGTGCGCTGAAAGCTcctcttatttt
tatttcaaaactcttTCTGATATTGTTGTCTTTAAATCTGTTGACGGCGA
ATCTTTTAGAAACTTTGGCaaatgttttcgttttttatgGGAAAGTTTAT
ATTGCATCAATAGTAAGAAGTCGTCCCTATCAATATTAAACGAGTTAAAG
ACTTTTTTTGACAAAACATTTTTGATTATCTGGAGTGATTAAGGAAATCC
AGCTGACTTTGGGTTTGTCCATGTTATTAATCTGTGTAGTGGTTGTTTAT
ATTATAAAAGTCTTAATAAGGGAAAATTCGTTTATTGTACAAAACTGTAG
AAGACAGGTACCGTTGTCACTCAGATTACCAACGCAGAAACGACCAACAA
TGTTGGGCCATACATTATACGATTCAGGGCCAACCTTAGCATTAAATCTT
CAAGTATGATTAATTTGCTGTTACGTGGCAAATTGTTGATATGACCTTGG
AGTAATTCGTAAAACGCATCTGACGGGTGCATACGTTTGATCTGGTTTGA
TAAATAAATAAGGGGTCCGTATTTATTTCGATTTGAACCATCATTAGTCT
CTGCAATATCAACTTATAGCCTTCGAGATTTTCGGCCAAAGATCGGTGCA
AAATTGTTGCTACTTCTTGTCGATGGATCCCTTCTTTTCGTTCCAATTGG
ATGTTAATAAAATTGCCTATTTCGAAAGATTCTGGCATCTGTTGCGCCCA
GTGGGTTTCCGAAATGCCGAGAATATCGATATTTAAACGAGTCATTTCTT
TtagtaaaagttttctttttgcgaaaatcaattttttctgtGTGTGGCTT
ATGTATATCAGGAAAAGAAAAGAGATACTTTATGACCATTTTTTATAGTT
TTTCATTGCATAAATGCTTTGGAAATCTCTTgtgtacatttttatttcag
tATTGAAAAGCCAAACAAAACTTGTTATTaaaataaagttgtaaaatgaT
CAATCGTATTAGTGGATTTATTGACAAACATTTGCAGCTCATCAGGGtac
aaatattttcaattttcacgttTACCTAATTCCTGATGGACCTAGATGGA
CTTCAATGGTAATTCTATGACTGATATAGGTTAAAATCATACCGAAGTGG
GCAATGAATTTAAATAATCTCAATCTAAGTTCTGTTTGAATTACATACTG
TTtagatatttcatatttttcgaTTTCTGTTGTTTCTGTACAAGATTGTT
TTCAGTCTCGTATTGTATAATCATTTGTACTTTGTAACAGAGAATGTTCT
GTATAATGTCTCTATCATATATTCTTTGTAGGGAATGACAGTAGCGACGG
GATGCATAGGAATCATACTGATAACTCGAAGGTACCATTTGGTATGtacc
aaaattttgattgttttaccATTTCATACCTAAAAAGCAGAATGCTTTTC
CTATTAATATCATGATCACGTTATTTCCATTGCACTTTTATTTCACCATT
ATTTGTTTATTCACTTGATTCAGATGAAAAGATACAGACATGTTTCTGAA
ATACCCAAAGAATTCATCACCAAGAAGGTATTTTTACGCGGAAAGTTGGA
GAGAATTGAAGTCTGTGGAACATTATTGATTCAGCACTCCCCTATTCTCT
CATTTGGCTTTTCCAAAGGTTTGACAATTTCATTCTTCATAGTGCGGACA
GGGGCctgatccccccttcttaaatgatcccgtcccttcttggcatcccc
caacctttaaaaataccTNAAGGGGCctgacccccccccttcttaaatga
tcccgtcccttcttggcatccccccaaggacaaaaatagctaacaaatat
atgtgaaatCTCTTTAGATAGTAAAAGCGAAATAATAcacttcttctttt
tgactcagactactctaacagaaaacttcctttcattgagaccaaatttc
ataacagtgcttgaaaataatctacaatatatatgtaagcccccttCTTA
AACTGTCCCCTtccctttttcatgaaaattccTGACCCCCCCCTTCTTTA
TTTTTTCGGAAGGTGTCATCTCCCCCctccccttaagaaagggggggggg
atgaAACAAACTATGATTCTTTCGAATtttcatagcgtcagcctgagttt
aggtcccaggcaaaaataaGGGCCCCCTGAAatttaagtccccccaaaga
tttatgaattttttgttagcccccaggacttttgaccctagacacttcca
aaaaattgatccagtaaaaaagggttttccaatgtaaatGGAGTTCAGTT
GTAAgttttttaagataaaatattttgcacactttttcaaaaatttttca
gattcatgagcttcaatttgggtatttgaagccaactattaagctgaatt
attttagcccccgcgttaagtgatgagattttagctccccccaattACAC
AGGtcccccaaaaaagtggtgtacttccagccccctccttttttggggaa
aaatgtagggtgtaacccccccccAACTAGCAAGGGGGGATGACGCTATG
ATTTTGCTATGATATTTTGTAGTATTTTACATTAGGAGAAGTATTCCGAA
CGAAATTGAAGTTGGATTAAcagtttttctctttatttgGATTGTTTAGG
AAGTCCTTCATTGCGTTTTTCGTTAGCTGGTGTTGAACTGCAAAATGGGT
GGTACGAACATTTACAGGAGCTCCAACACAAAAATATCCTTTTCcaaatt
ttgcagaaaaatgATAAAGAGCTGAAAGgagttttattttataaaagagT
AAGTGAATAAATAAAGGTTGTTTAGGGAGACCCTGCCATGTCaaataaat
atttaatttctgcGACTTTTGCTAGAAATTCTTTTTAtttcgattaaaaa
aaacccAGGGACTAAAATAGCTAAAACCCTTTATCGTTTAGCTcattttt
ttaagattcaaTCATTTATTCacaatttttgacttttaaatccAGTTGGA
ATTGTTTAGTCTGGAAAACTGCCTTAGGTTTCTTCTTATTCAATGAAATT
ATTCGATAGCAGACCCTTTGACCCTTTTTCTCACATTTCGCCAATTGGTG
TCCTAAAATATCCTATATTatatttcgaaaattgaaaataaacggATCTA
CATGAAGGAAATGCCATGAAGGCTACGTGAGGACATTTGAGTGAAGACTA
AAAAAAGCCCCTAAGTATCACAGATGTATTTTATTGTTATGtttaatacc
ttaagggaaataATTATGGTTAACTTTTCGAAATTAAAGTTCTCGCAAAA
ATTAACTTTATTTGTAATATTGGAAATTTAAAGTTATTCGctcaaattct
ttttcaacaatTCCTGCCcctcgctaaaattagttcttCCCGAGCAAAAT
GACTAAACTTCaaactgaaactttttttgacttCAGGGTTGGCTATCGAA
AGAAATGAATGTGAATGAAGATTTGGTTGGAAGAGGGCTCGCAATAACAC
GATGTAACATTCCTTCACCACTAAATGTGTTCTTATACCAAGAGTTGATG
GAGAGGTTACTCAAAGTCGAACTTCAAGCCGATAAGAAGGGAATCGGGAT
CTGGAGACGAGAAAGGGAGGAGACTTTCATTAAAAGATTGATTGGTTGGG
TGAAAAGAAAGTTGCAAAAATGAGGAGGTAAATGTTCAATTCTTTTGATA
ATTGTCTTGACGGtgcttcttcttttgtttttctaatcATGCTCAATGTG
ATAACAAGAAGTATATTGTTCGACTTGAAGTTGTTTGCTATTTTATATGT
GGGAAGTTGAGTTAGGCTACTGCTATCCCCGAAATTCTTTCAAACATCAT
TTTACGTATATATGTTAGACTTAGTGCTTTAAACccctttcatttttcaa
agaaatttcctTAGTGTTTTTACACTTTCACAGCTCAACAAAAAAGGATA
ACTATTTCTAGACATCATTCAGCATGCTTCAATGAATAGCGAGCTTCTGT
GAATTGAATGAAGCTTTTCATTCTCTTTCAATAGACGCATCTATTTTTGA
CTTTGCTTTGCTCATGCGCactgaaaaataattcaaaggaTCAGCTAGAA
GTATCTCGTGAGCAACATTATTTGCTTTTTTGCATGCGTGAAAATTTTGC
AATTGACTTGTGAGGAGGTTTTCCGAAAGCGTTTAAAAGGACTTTGATGG
TGGtgaaagaagaactttaaatccttctcaaagaAAACAAACTTCTTAAA
GTTTGAAGAGGTCCTTTTAATTATTTCAATATTTCCATTGAGCTGTTGTT
TTTAGATCTTCTTTTTGTACTAGTTTCACTTTTATTGAGCTCTTTATTGA
ATAGGTTGATAAGGCTTTTTATGGGAAAATCTTTGCCCTCTTGCTGATCT
TTAAAAATCTGTAAGGTTATTGCAATGTTTAATGAAAGAAAAGGATTCTT
TTTCACTTtgctttgttttgttgtttcttcgCGGCGAAAGGATAAAACgg
attttcctttttctttcacttttgttgAGATGATgggaaaatatcatttt
cattgCAATTTAATTTTATCACCTTCTTGCTCaacttttattaatttcaa
ataaagaatttgtttaaaaataatcttttcaaaataaacGGCTCGTGTCA
AAAAGACGGGggttaacttttatcaaattaaatCGAATCCATTCCGACCG
CTGACAAACTACCTCTCAAACAAAAGCTATATCAAAAGAATATTTGAGTt
ggaaattaaattttcatcaatttgaGTCTCGGAAAATTCGTTGGGATCGT
GGCAAAATGTCCCCCCTGTATTAGTGTAAAGTTAGTTCCCTGTGAAGTAA
TGAAATTAGTATCGAACCTTCTTCTTCCTCCCTAGCTCTATAAATATCAA
ACCAAGATTTGTTGGGTCCATCATTGCGAAAGATTTAAAAGTGAAAGAAG
GACGTATTTCATTCCTGTCTGCATCCAGATGCAATTACTGCAAACCAACA
CCCACTCTCAACAACATCATCAACAACACTTTCCTCAACAACAAATGATG
GACAACAATCTCGTCATCAACAGCGAACACCAAATGCTTATCGGTAAcga
gtttttccaaaaatattctccCATGGCAACCTACACAAACAATAACATTC
AACTACAACCCAGAATGCATCATTTACCGCTTCAACATCAACCCATACAT
CCGCGACCGCGAAGGCGCCGCTCCAACCACAGCTTAGTTGCCACCATGGA
TCCTGAAGCGGTCGCTCGTCGAAATGAACGCGAACGGAACCGCGTAAAAC
AAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTTCCCTTTTTGCCC
AATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATGTGCCATGATGTA
TATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACCATAATAACACGC
ACTATCTTACACATGCTCTCGGTATTAAAACCAGACCAAACGGGAGTTTT
AGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCTTTTGGAACAGGA
CTTGGAAGATGATTTACTGGGGCACTGATCCCAtattcatttgaaaatta
gttttttctatttttgtcgGCTTTAAGCCCAATCTATTTTCACGTGCTGA
ACGATGTTTAGTttgtattaaaaagaaattgtaaaTATGGAGCtgtatat
atattttatttatagaattcaaaataaacaaagaataCGCAATGAATANC
CATGGATCCTGAAGCGGTCGCGCGTCGAAATGAACGCGAACGGAACCGCG
TAAAACAAGTGAACGATGGATTTGATGCTTTGCGTAAGAAAGTTCCCTTT
TTGCCCAATAAAAAGAAACTCTCAAAAGTGGACATTCTCCGATGTGCCAT
GATGTATATTCGTGATTTGAAAGGCGTGGTCGAAGAGTACGACCATAATA
ACACGCACTATCTTACACATGCTCTCGGTATTAAAACCAGACCAAACGGG
AGTTTTAGTAGTTCAAGTAGCTCATCTAGTGACGATTTGATTCTTTTGGA
ACAGGACTTGGAAGATGATTTACTGGGGCACTGATCCCAtattcatttga
aaattagttttttctatttttgtcgGCTTTAAGCCCAATCTATTTTCACG
TGCTGAACGATGTTTAGTttgtattaaaaagaaattgtaaaTATGGAGCt
gtatatatattttatttatagaattcaaaataaacaaagaataCGCAATG
AATATTCTTTCGTCCTCACTTCAAAAGGGCACATCTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031375XLOC_031375Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049427-exon-scaffold_159-1491911889:66892..71287TCONS_00049427-exon-scaffold_159-1491911889:66892..71287Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1510915933:66892..71287TCONS_00049427-exon-scaffold_159-1510915933:66892..71287Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1575043694:66892..71287TCONS_00049427-exon-scaffold_159-1575043694:66892..71287Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1491911889:71573..71632TCONS_00049427-exon-scaffold_159-1491911889:71573..71632Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1510915933:71573..71632TCONS_00049427-exon-scaffold_159-1510915933:71573..71632Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1575043694:71573..71632TCONS_00049427-exon-scaffold_159-1575043694:71573..71632Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1491911889:71765..71818TCONS_00049427-exon-scaffold_159-1491911889:71765..71818Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1510915933:71765..71818TCONS_00049427-exon-scaffold_159-1510915933:71765..71818Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1575043694:71765..71818TCONS_00049427-exon-scaffold_159-1575043694:71765..71818Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1491911889:72891..73039TCONS_00049427-exon-scaffold_159-1491911889:72891..73039Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1510915933:72891..73039TCONS_00049427-exon-scaffold_159-1510915933:72891..73039Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1575043694:72891..73039TCONS_00049427-exon-scaffold_159-1575043694:72891..73039Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1491911889:73678..73918TCONS_00049427-exon-scaffold_159-1491911889:73678..73918Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1510915933:73678..73918TCONS_00049427-exon-scaffold_159-1510915933:73678..73918Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1575043694:73678..73918TCONS_00049427-exon-scaffold_159-1575043694:73678..73918Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1491911889:75127..76530TCONS_00049427-exon-scaffold_159-1491911889:75127..76530Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1510915933:75127..76530TCONS_00049427-exon-scaffold_159-1510915933:75127..76530Clytia hemisphaericaexon
TCONS_00049427-exon-scaffold_159-1575043694:75127..76530TCONS_00049427-exon-scaffold_159-1575043694:75127..76530Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:66892..76530 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.271551	0	0	0	1.56614e-10	0.000552449	0.373879	0	3.64036e-05	0.360123	0.00161765	0.169557	1.27049e-05	2.84619e-09	0.203847	3.78646e-11	0	0.169967	1.04972e-09	0.308176	0.000692763	0.430926	0.100076	0.104697	0	0	3.24314e-08	0.315293	0.278785	0.336662
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049427 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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