TCONS_00049443 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00049443
Unique Name	TCONS_00049443
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2902

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_159:135402..143443-

transcript sequence

>TCONS_00049443 ID=TCONS_00049443|Name=TCONS_00049443|organism=Clytia hemisphaerica|type=transcript|length=2902bp
AGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTT
TTTGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCT
TTGTGGTAAGGTGATTTCAACGGCCAACGGCGACAAAGAGTCAGTTCATG
TGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACAC
CTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTTA
TCTGAGACAACCACAAACCAACCCTTATCTTAGACAACCTCGACCTGATC
CACGATATGCACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCCG
CCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAG
GTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTT
ATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAGA
CCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACA
ATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCTG
GCAGGAGAATCAACATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGC
TTCACTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACC
AGATAATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCT
ACATCAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACG
AGTGTAGATGCACGAATTACTTCACCCAACTTACGAGCAGAGCCAGTGAA
GCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACA
AATCAATGCTGGACCACCATGGTGAACAGAAAGTCATGAATTACACCATC
ATGCTCATGAATTCGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGC
GCCCATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGT
CGTATTACCGTATCGTGACCAATCGTCCGGAAATCAGCGTTCCCGGAGCA
TGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACTCGGTGGATTTTCA
TCTCATCTTGACAAGggaGGATATTGGACCAGCAGGGTTTGCAGCTATGT
ATACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCC
GACACTTCTTTCGTCATCACTCATGAACTTGCACACGCTTTGGGTATCGA
TCATGACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATA
TTATGGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAA
TGTAGTGCGAAAAtgatttggcaaaatttgaaATACTTCACGTGTTTAAA
GAACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTAC
CAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCC
TCCGCTCTTCCTTGCACACCCAGGAATCCATTGACGGCGTGCAGATATTT
ATGGTGTCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATG
CTCCTTTGGAAGGCTCAACGTGTGCCAAATCAAAGTGGTGCAAAAGAGGG
CGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAA
ATATTCGGAATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTG
TTCAACATCGAAACAGAAGTTGCACCAATCCCAAGCCGAGGTTATCAGGG
AAGAAATGTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAG
GAATGGGATTTGCAAGCCTTTCAACATGCGACAATTGCTCTTAAGCGGAG
AAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGAATGAT
AACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCAACGTAGACAAGT
AAAGTCGTTAAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGA
AGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACG
CCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGAC
AGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTC
TGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCA
CAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTC
GTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTA
AGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCT
ATCAACATCGAGTATAAGATCACGATCGAAGCAGTGCGTGGTAATTCATA
TTACGGAGATATAGCAATTgatgatattcaattttcttacGGGCTGTGTA
ATGCAAAGTCAAGTCAAGACGATAAACAGATCTGTACTAACGTGTGTATT
ACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCC
CTGTAAATtaccaaaatcgaaaaataatgTTTGCTTTAGACAAGTTTGTC
AGcccGTTAACTGTCATGGTGTTATAAATGGCCGAAAATGCTGACgttac
aaaaatgatttttgagaaaatttaatgTATTTAATCagttttatttgtaa
aacttatatttttatgaaagaGAATAGAAAAAGTTTAGACCTGAATAGAA
CGCTGGAAATATAAATAATATACTGTACATCATTGACCACAAAATGATCA
AA

Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..143443-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00049443 ID=TCONS_00049443|Name=TCONS_00049443|organism=Clytia hemisphaerica|type=transcript|length=8042bp|location=Sequence derived from alignment at scaffold_159:135402..143443- (Clytia hemisphaerica)
AGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTT
TTTGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCT
TTGTGGTGTAAGTTTCATCTACACTGTATTTCACTGTATATCATGTCACT
TATTATTAAGTAGTATGTTTGAACGTTAATTAGTACAAATAACCTAAAGT
TTAGGCAACACTTTGTTTCTAAACAATTCACTTTATTTTAGAAGGTGATT
TCAACGGCCAACGGCGACAAAGGTATGAGTCATTCCTAATACAAACTTTA
TACTATGCTGCTTTCTATGACGGAAGGGTTTTTGCGGTGATGAATATTTT
GTTCTTAAAACAAACAATAATGACACCCTTCATTTCATTTTTACAGAGTC
AGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAACTTC
CACCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGACTT
CCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAACCTCG
ACCTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGTTTTC
CCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACCT
GACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAA
TCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCAC
CACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGT
TACCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCATCAA
CAAATCTGGCAGGAGAATCAACGTAAGTTTAACAACAAAGTCTTCTTATT
CACCATTCAAAACGTGACCGAGATGAGCACGTAATTCCCTTTCCACCTTC
TTTCATTACAGATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGCTTC
ACTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACCAGA
TAATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCTACA
TCAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACGAGT
GTAGATGCACGAATTACTTCACGTAAGAAGGCTCTCTCAGTGGAAACAAT
TCAATATCTATTTAACAAGTAATTTGAAAAATATTTAGTGTACAGCAATT
CTTCTCAAATATCTAATTTTAACTTTAATTCCTTGCAGCCAACTTACGAG
CAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAG
GTGGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGTCAT
GAATTACACCATCATGCTCATGAATTCGGTACGTTAGAGTGCAAAACCTT
CTTCAAAGTATAATGAAAATCTTAAGAAGGTGATTGTTACCATTTTTCAT
CTTCATCTACAGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGCGCC
CATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGGTCA
GTACAACATATATTGTCTCAACACCACACACAGTACCAGACCCCTTCATT
CACATTGTATTCTTCCCTTTCACATTTTCAGTCGTATTACCGTATCGTGA
CCAATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAA
GTTGCTCAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAAGGTA
TACATATTGCAGCATTTTCTCTAACCATTCATTATTTTACATCCCTACAT
CAATTTCTAATAATTGATCAAGGTATTTTCCTAAGATTTTCCAAACCTTC
TCTTCAATGGCAGATTTATATAAAAAGTTGTTTATTCCTTTTCCAAGCTC
TATCTCTTGAACTGGAGCAAGAATCATCATTTTTAAAAGAGATTTATTTT
ATTTTCAGGGAGGATATTGGACCAGCAGGTAAGTTGATTTCTTGAAAAAA
TTCTCCACCAGTGATTTGCTTATATAGATTTTGTACTGCTCAAAAACCTT
CTTCACTCAATTTTATCTTTCCAACACACACAGGGTTTGCAGCTATGTAT
ACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCCGA
CACTTCTTTCGTCATCACTCATGAACTTGCACACGCGTAAGTTATACAAC
AGAGATAGGAGATCTTTATTTATTAGCTGTTACCCGTTATATTTTCTAAC
GTTGACCATGTCTACAACACTGTGTTTTCACACCTTGGTAAAGTTTAAGC
AACCGACACTAAGGTTTGCTGGCTGTTACTTATGATAATAGTTTCCCGAT
TACCCGATTACCGTAATCCGTTTTTGTGATTCAGTTTGGGTATCGATCAT
GACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATATTAT
GGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAATGTA
GTGCGAAAATGATTTGGCAAAATTTGAAGTAAGCAAATGTGTCAAAAGAG
AACTAATTTTATTGATGAATATTGCTTTGAAAGAGGTAAATAGAATAAAT
ACCGTAGATAACTAGATAAATAGCAATTTCTTTTTCCATTGTTTAGATAC
TTCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAAAAG
CATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAA
GCTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGGTTTGTTCCATC
ATTTTTGTTTTTCATGTATTCTATAACAGATATACTCTACTAGAATCGTA
AGTTGACATAATTCGATGTGAACTCATCATCGAAGGACGATTTGTAGTGT
ACTCTTTCACAATTTCAGAATCCATTGACGGCGTGCAGATATTTATGGTG
TCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTCCTT
TGGAAGGCTCAACGTGTGCCAAATCAAAGGTGAGATTTCTTTTGGAGTTT
ATGTGTCTTATTTAAAGCTTACAGACAAAGAGGTAATTAATCATAAAGTT
TCTCATAAAAACATGAATTTATCGAACAATTTGTGGCTAATTTGGCTAAC
CATCATCTCTTTTTGGACAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAG
ATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAATTCAC
ACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACA
GAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAGCTT
CCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCATACTT
TATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTCAAG
GTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGC
AAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGAAAGT
AGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTTTTTA
TTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGA
CAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTA
TCGCGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTACGTTC
TTTCATTGGATTCGTCAATGTAAAACAACAATCTCCTTAAGAAAATGAAA
GTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAGTAAA
GTCGTTAAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGA
ATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCC
TCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGG
GAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGA
GGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAA
GTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTT
AGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGA
AAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATC
AACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAG
TCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCT
GTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTTCTTG
ATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTTTCTT
ATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATA
GCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAG
TCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTT
CTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGG
TCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTT
TCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGA
TAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAAT
TACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAAT
AAACATTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAAGATCAAACCAGTTAACGGTGGGTGGTCCAAGTATTCGGA
ATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATC
GAAACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCG
AAGCTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATC
ATACTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAAT
GTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGG
ATTTGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGA
GAAAGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACC
TTTTTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAAC
ATACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAG
AGTTTATCGAGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTT
ACGTTCTTTCATTGGATTCGTCAATGTAAAACATCAATCCCCTTAAGAAA
ATGAAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGC
AGTAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGAT
GGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCA
ACGCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAA
GACAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCC
CTCTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCA
TCACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGG
CTCGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGA
GTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTG
GCTATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCAC
TTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCAT
TATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCT
TTCTTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTG
TTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGA
GATATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAA
GTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAG
TATTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTT
AAATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTC
TTCTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTAC
CCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCT
GTAAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAG
GTAAATAAACATTTTATTNGAAATACACATTCGAAGGGGCAAGCATTCAC
GCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCT
GAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAACAAT
ATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGG
GATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGA
ATACTTGCTCCTTTCTTGATGATGAAAAGAAGGAATTACCGACCATGACC
AATATATCTCAATATGTTTCTTATTAGATCACGATCGAAGCAGTGCGTGG
TAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCTTACG
GGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTG
GGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAATAAGTCA
AGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTACCTGTC
AGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGATCTGTA
CTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTT
CCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGTTTGCTT
TAGACAAGTTTGTCAGGTAAATAAACATTTTATTGCAAATGATCCAGATA
AAGGTATTGAACCGCATTGAATATCTTTAATCTTTATTCTCATTCACCAA
AGAATGAGAGATAATGACAATTTATCATTCTTAATTTTTCAGCCCGTTAA
CTGTCATGGTGTTATAAATGGCCGAAAATGCTGACGTTACAAAAATGATT
TTTGAGAAAATTTAATGTATTTAATCAGTTTTATTTGTAAAACTTATATT
TTTATGAAAGAGAATAGAAAAAGTTTAGACCTGAATAGAACGCTGGAAAT
ATAAATAATATACTGTACATCATTGACCACAAAATGATCAAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031382	XLOC_031382	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_159	supercontig	scaffold_159:135402..143443 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0937913	0.151248	0	0.12866	0	0	1.29802	0.576461	7.93053e-05	0.000331501	2.14714	0.000555403	0.0607431	0.000116994	0	0	0	0	0	0	0	0	0	0	15.4391	7.18791	5.94711e-05	6.41569e-05	0	0

Blast

[Close]

BLAST of TCONS_00049443 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.748e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 3

Query:  918 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 1886
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600

The following BLAST results are available for this feature:

BLAST of TCONS_00049443 vs. Swiss-Prot (Human)

BLAST of TCONS_00049443 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ATS14	1.748e-43	33.43	A disintegrin and metalloproteinase with thrombosp...	[more]

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TCONS_00049443 (transcript) - C. hemisphaerica