TCONS_00049444 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049444
Unique NameTCONS_00049444
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2953

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049444 ID=TCONS_00049444|Name=TCONS_00049444|organism=Clytia hemisphaerica|type=transcript|length=2953bp
TTAAAAGAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAATGCT
GAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTT
TTTTGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATC
TTTGTGGTAAGGTGATTTCAACGGCCAACGGCGACAAAGAGTCAGTTCAT
GTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACA
CCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTT
ATCTGAGACAACCACAAACCAACCCTTATCTTAGACAACCTCGACCTGAT
CCACGATATGCACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCC
GCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAA
GGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGT
TATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAG
ACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAAC
AATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCT
GGCAGGAGAATCAACATGTTCCAGTCCCTGCCTTACGGTCACGAGACACG
CTTCACTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAAC
CAGATAATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTC
TACATCAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAAC
GAGTGTAGATGCACGAATTACTTCACCCAACTTACGAGCAGAGCCAGTGA
AGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGAC
AAATCAATGCTGGACCACCATGGTGAACAGAAAGTCATGAATTACACCAT
CATGCTCATGAATTCGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAG
CGCCCATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCG
TCGTATTACCGTATCGTGACCAATCGTCCGGAAATCAGCGTTCCCGGAGC
ATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACTCGGTGGATTTTC
ATCTCATCTTGACAAGggaGGATATTGGACCAGCAGGGTTTGCAGCTATG
TATACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACC
CGACACTTCTTTCGTCATCACTCATGAACTTGCACACGCTTTGGGTATCG
ATCATGACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAAT
ATTATGGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAA
ATGTAGTGCGAAAAtgatttggcaaaatttgaaATACTTCACGTGTTTAA
AGAACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTA
CCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTC
CTCCGCTCTTCCTTGCACACCCAGGAATCCATTGACGGCGTGCAGATATT
TATGGTGTCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCAT
GCTCCTTTGGAAGGCTCAACGTGTGCCAAATCAAAGTGGTGCAAAAGAGG
GCGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACGGTGGGTGGTCCA
AATATTCGGAATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATT
GTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGCCGAGGTTATCAGG
GAAGAAATGTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAA
GGAATGGGATTTGCAAGCCTTTCAACATGCGACAATTGCTCTTAAGCGGA
GAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGAATGA
TAACGTCACTAAATGGAGAGTTTATCGAGAAAGCGAGCAACGTAGACAAG
TAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGG
AAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAAC
GCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGA
CAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCT
CTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATC
ACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCT
CGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGT
AAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGC
TATCAACATCGAGTATAAGATCACGATCGAAGCAGTGCGTGGTAATTCAT
ATTACGGAGATATAGCAATTgatgatattcaattttcttacGGGCTGTGT
AATGCAAAGTCAAGTCAAGACGATAAACAGATCTGTACTAACGTGTGTAT
TACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATC
CCTGTAAATtaccaaaatcgaaaaataatgTTTGCTTTAGACAAGTTTGT
CAGcccGTTAACTGTCATGGTGTTATAAATGGCCGAAAATGCTGACgtta
caaaaatgatttttgagaaaatttaatgTATTTAATCagttttatttgta
aaacttatatttttatgaaagaGAATAGAAAAAGTTTAGACCTGAATAGA
ACGCTGGAAATATAAATAATATACTGTACATCATTGACCACAAAATGATC
AAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..143494-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049444 ID=TCONS_00049444|Name=TCONS_00049444|organism=Clytia hemisphaerica|type=transcript|length=8093bp|location=Sequence derived from alignment at scaffold_159:135402..143494- (Clytia hemisphaerica)
TTAAAAGAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAATGCT
GAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTT
TTTTGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATC
TTTGTGGTGTAAGTTTCATCTACACTGTATTTCACTGTATATCATGTCAC
TTATTATTAAGTAGTATGTTTGAACGTTAATTAGTACAAATAACCTAAAG
TTTAGGCAACACTTTGTTTCTAAACAATTCACTTTATTTTAGAAGGTGAT
TTCAACGGCCAACGGCGACAAAGGTATGAGTCATTCCTAATACAAACTTT
ATACTATGCTGCTTTCTATGACGGAAGGGTTTTTGCGGTGATGAATATTT
TGTTCTTAAAACAAACAATAATGACACCCTTCATTTCATTTTTACAGAGT
CAGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAACTT
CCACCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGACT
TCCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAACCTC
GACCTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGTTTT
CCCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACC
TGACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTA
ATCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCA
CCACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGG
TTACCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCATCA
ACAAATCTGGCAGGAGAATCAACGTAAGTTTAACAACAAAGTCTTCTTAT
TCACCATTCAAAACGTGACCGAGATGAGCACGTAATTCCCTTTCCACCTT
CTTTCATTACAGATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGCTT
CACTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACCAG
ATAATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCTAC
ATCAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACGAG
TGTAGATGCACGAATTACTTCACGTAAGAAGGCTCTCTCAGTGGAAACAA
TTCAATATCTATTTAACAAGTAATTTGAAAAATATTTAGTGTACAGCAAT
TCTTCTCAAATATCTAATTTTAACTTTAATTCCTTGCAGCCAACTTACGA
GCAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACA
GGTGGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGTCA
TGAATTACACCATCATGCTCATGAATTCGGTACGTTAGAGTGCAAAACCT
TCTTCAAAGTATAATGAAAATCTTAAGAAGGTGATTGTTACCATTTTTCA
TCTTCATCTACAGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGCGC
CCATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGGTC
AGTACAACATATATTGTCTCAACACCACACACAGTACCAGACCCCTTCAT
TCACATTGTATTCTTCCCTTTCACATTTTCAGTCGTATTACCGTATCGTG
ACCAATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGA
AGTTGCTCAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAAGGT
ATACATATTGCAGCATTTTCTCTAACCATTCATTATTTTACATCCCTACA
TCAATTTCTAATAATTGATCAAGGTATTTTCCTAAGATTTTCCAAACCTT
CTCTTCAATGGCAGATTTATATAAAAAGTTGTTTATTCCTTTTCCAAGCT
CTATCTCTTGAACTGGAGCAAGAATCATCATTTTTAAAAGAGATTTATTT
TATTTTCAGGGAGGATATTGGACCAGCAGGTAAGTTGATTTCTTGAAAAA
ATTCTCCACCAGTGATTTGCTTATATAGATTTTGTACTGCTCAAAAACCT
TCTTCACTCAATTTTATCTTTCCAACACACACAGGGTTTGCAGCTATGTA
TACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCCG
ACACTTCTTTCGTCATCACTCATGAACTTGCACACGCGTAAGTTATACAA
CAGAGATAGGAGATCTTTATTTATTAGCTGTTACCCGTTATATTTTCTAA
CGTTGACCATGTCTACAACACTGTGTTTTCACACCTTGGTAAAGTTTAAG
CAACCGACACTAAGGTTTGCTGGCTGTTACTTATGATAATAGTTTCCCGA
TTACCCGATTACCGTAATCCGTTTTTGTGATTCAGTTTGGGTATCGATCA
TGACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATATTA
TGGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAATGT
AGTGCGAAAATGATTTGGCAAAATTTGAAGTAAGCAAATGTGTCAAAAGA
GAACTAATTTTATTGATGAATATTGCTTTGAAAGAGGTAAATAGAATAAA
TACCGTAGATAACTAGATAAATAGCAATTTCTTTTTCCATTGTTTAGATA
CTTCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAAAA
GCATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGA
AGCTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGGTTTGTTCCAT
CATTTTTGTTTTTCATGTATTCTATAACAGATATACTCTACTAGAATCGT
AAGTTGACATAATTCGATGTGAACTCATCATCGAAGGACGATTTGTAGTG
TACTCTTTCACAATTTCAGAATCCATTGACGGCGTGCAGATATTTATGGT
GTCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTCCT
TTGGAAGGCTCAACGTGTGCCAAATCAAAGGTGAGATTTCTTTTGGAGTT
TATGTGTCTTATTTAAAGCTTACAGACAAAGAGGTAATTAATCATAAAGT
TTCTCATAAAAACATGAATTTATCGAACAATTTGTGGCTAATTTGGCTAA
CCATCATCTCTTTTTGGACAGTGGTGCAAAAGAGGGCGTTGTGTGACCAA
GATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAATTCA
CACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAAC
AGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAGCT
TCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCATACT
TTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTCAA
GGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTG
CAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGAAAG
TAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTTTTT
ATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACG
ACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTT
ATCGCGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTACGTT
CTTTCATTGGATTCGTCAATGTAAAACAACAATCTCCTTAAGAAAATGAA
AGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAGTAA
AGTCGTTAAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAG
AATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCC
CTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAG
GGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTG
AGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACA
AGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGT
TAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAG
AAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTAT
CAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAA
GTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTC
TGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTTCTT
GATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTTTCT
TATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATAT
AGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAA
GTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTT
TCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATG
GTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTT
TTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAG
ATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAA
TTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAA
TAAACATTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAAGATCAAACCAGTTAACGGTGGGTGGTCCAAGTATTCGG
AATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACAT
CGAAACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTC
GAAGCTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTAT
CATACTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAA
TGTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGG
GATTTGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAG
AGAAAGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCAC
CTTTTTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAA
CATACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGA
GAGTTTATCGAGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTT
TACGTTCTTTCATTGGATTCGTCAATGTAAAACATCAATCCCCTTAAGAA
AATGAAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTG
CAGTAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGA
TGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGC
AACGCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCA
AGACAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACC
CCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTC
ATCACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTG
GCTCGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGG
AGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACT
GGCTATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCA
CTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCA
TTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCC
TTTCTTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCT
GTTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGG
AGATATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAA
AGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAA
GTATTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCT
TAAATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTT
CTTCTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTA
CCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCC
TGTAAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCA
GGTAAATAAACATTTTATTNGAAATACACATTCGAAGGGGCAAGCATTCA
CGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGC
TGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAACAA
TATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTG
GGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAG
AATACTTGCTCCTTTCTTGATGATGAAAAGAAGGAATTACCGACCATGAC
CAATATATCTCAATATGTTTCTTATTAGATCACGATCGAAGCAGTGCGTG
GTAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCTTAC
GGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGT
GGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAATAAGTC
AAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTACCTGT
CAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGATCTGT
ACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACT
TCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGTTTGCT
TTAGACAAGTTTGTCAGGTAAATAAACATTTTATTGCAAATGATCCAGAT
AAAGGTATTGAACCGCATTGAATATCTTTAATCTTTATTCTCATTCACCA
AAGAATGAGAGATAATGACAATTTATCATTCTTAATTTTTCAGCCCGTTA
ACTGTCATGGTGTTATAAATGGCCGAAAATGCTGACGTTACAAAAATGAT
TTTTGAGAAAATTTAATGTATTTAATCAGTTTTATTTGTAAAACTTATAT
TTTTATGAAAGAGAATAGAAAAAGTTTAGACCTGAATAGAACGCTGGAAA
TATAAATAATATACTGTACATCATTGACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049444-exon-scaffold_159-1575043694:143337..143494TCONS_00049444-exon-scaffold_159-1575043694:143337..143494Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:143172..143202TCONS_00049444-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:142572..143047TCONS_00049444-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:142272..142482TCONS_00049444-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:142016..142155TCONS_00049444-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:141848..141931TCONS_00049444-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:141647..141762TCONS_00049444-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:141416..141435TCONS_00049444-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:141208..141310TCONS_00049444-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:140866..141009TCONS_00049444-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:140606..140747TCONS_00049444-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:140365..140475TCONS_00049444-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:140075..140223TCONS_00049444-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:137764..137866TCONS_00049444-exon-scaffold_159-1575043694:137764..137866Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:137562..137673TCONS_00049444-exon-scaffold_159-1575043694:137562..137673Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:137023..137441TCONS_00049444-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:136733..136832TCONS_00049444-exon-scaffold_159-1575043694:136733..136832Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:136444..136577TCONS_00049444-exon-scaffold_159-1575043694:136444..136577Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1575043694:135402..135601TCONS_00049444-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:143337..143494TCONS_00049444-exon-scaffold_159-1510915933:143337..143494Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:143172..143202TCONS_00049444-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:142572..143047TCONS_00049444-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:142272..142482TCONS_00049444-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:142016..142155TCONS_00049444-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:141848..141931TCONS_00049444-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:141647..141762TCONS_00049444-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:141416..141435TCONS_00049444-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:141208..141310TCONS_00049444-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:140866..141009TCONS_00049444-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:140606..140747TCONS_00049444-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:140365..140475TCONS_00049444-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:140075..140223TCONS_00049444-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:137764..137866TCONS_00049444-exon-scaffold_159-1510915933:137764..137866Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:137562..137673TCONS_00049444-exon-scaffold_159-1510915933:137562..137673Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:137023..137441TCONS_00049444-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:136733..136832TCONS_00049444-exon-scaffold_159-1510915933:136733..136832Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:136444..136577TCONS_00049444-exon-scaffold_159-1510915933:136444..136577Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1510915933:135402..135601TCONS_00049444-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:143337..143494TCONS_00049444-exon-scaffold_159-1491911889:143337..143494Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:143172..143202TCONS_00049444-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:142572..143047TCONS_00049444-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:142272..142482TCONS_00049444-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:142016..142155TCONS_00049444-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:141848..141931TCONS_00049444-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:141647..141762TCONS_00049444-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:141416..141435TCONS_00049444-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:141208..141310TCONS_00049444-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:140866..141009TCONS_00049444-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:140606..140747TCONS_00049444-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:140365..140475TCONS_00049444-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:140075..140223TCONS_00049444-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:137764..137866TCONS_00049444-exon-scaffold_159-1491911889:137764..137866Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:137562..137673TCONS_00049444-exon-scaffold_159-1491911889:137562..137673Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:137023..137441TCONS_00049444-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:136733..136832TCONS_00049444-exon-scaffold_159-1491911889:136733..136832Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:136444..136577TCONS_00049444-exon-scaffold_159-1491911889:136444..136577Clytia hemisphaericaexon
TCONS_00049444-exon-scaffold_159-1491911889:135402..135601TCONS_00049444-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..143494 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.858302	0.784158	2.39516	9.71651e-05	2.19906	4.45904	3.54932	0.000200859	5.24834	15.3598	1.11136	0.290107	2.02275	10.5354	0.486219	3.15974	9.15019	7.47312	10.049	9.33011	9.74199	11.3891	0.561712	1.32967	3.03386	2.33299
Blast
[Close]
BLAST of TCONS_00049444 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.867e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 3 
Query:  969 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 1937
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049444 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS141.867e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
back to top