TCONS_00049445 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049445
Unique NameTCONS_00049445
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2911

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049445 ID=TCONS_00049445|Name=TCONS_00049445|organism=Clytia hemisphaerica|type=transcript|length=2911bp
CCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAG
TGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGCTTATACT
TTTTACACATCTTTGTGGTGTGATTTCAACGGCCAACGGCGACAAAGAGT
CAGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAACTT
CCACCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAGACT
TCCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAACCTC
GACCTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGTTTT
CCCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACC
TGACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTA
ATCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCA
CCACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGG
TTACCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCATCA
ACAAATCTGGCAGGAGAATCAACATGTTCCAGTCCCTGCCTTACGGTCAC
GAGACACGCTTCACTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAG
CGTACAACCAGATAATTCTTTCTGGCAAGCATATGATATGACGACAAGCT
TTCCTCTCTACATCAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGA
CAAGGAACGAGTGTAGATGCACGAATTACTTCACCCAACTTACGAGCAGA
GCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGG
TGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGTCATGAAT
TACACCATCATGCTCATGAATTCGGTGACGCGGACGTTTTTGCATCGATC
GTTCGGAGCGCCCATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGA
ACAAACCGTCGTATTACCGTATCGTGACCAATCGTCCGGAAATCAGCGTT
CCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACTCGGT
GGATTTTCATCTCATCTTGACAAGggaGGATATTGGACCAGCAGGGTTTG
CAGCTATGTATACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAG
AACGGACCCGACACTTCTTTCGTCATCACTCATGAACTTGCACACGCTTT
GGGTATCGATCATGACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCG
GTGGAAATATTATGGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGA
TGGTCCAAATGTAGTGCGAAAAtgatttggcaaaatttgaaATACTTCAC
GTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCATGG
ATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGCTAT
CATGGTTCCTCCGCTCTTCCTTGCACACCCAGGAATCCATTGACGGCGTG
CAGATATTTATGGTGTCGACCCAATCAGAGTGCACCTTGTCAACCTGTAT
GGTGGCATGCTCCTTTGGAAGGCTCAACGTGTGCCAAATCAAAGTGGTGC
AAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACGGTGG
GTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGAAAGTCCACCA
GATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGCCGAGG
TTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCGTATTTTGAT
CCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGACAATTGCTCT
TAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTAT
AAGAATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAGCGAGCAACG
TAGACAAGTAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGAT
GCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAA
GGAGCAACGCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAA
GACCAAGACAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTA
CCACCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATC
TTCTCATCACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGG
TGTTGGCTCGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAA
TGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTT
GAACTGGCTATCAACATCGAGTATAAGATCACGATCGAAGCAGTGCGTGG
TAATTCATATTACGGAGATATAGCAATTgatgatattcaattttcttacG
GGCTGTGTAATGCAAAGTCAAGTCAAGACGATAAACAGATCTGTACTAAC
GTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGA
TGGCTATCCCTGTAAATtaccaaaatcgaaaaataatgTTTGCTTTAGAC
AAGTTTGTCAGcccGTTAACTGTCATGGTGTTATAAATGGCCGAAAATGC
TGACgttacaaaaatgatttttgagaaaatttaatgTATTTAATCagttt
tatttgtaaaacttatatttttatgaaagaGAATAGAAAAAGTTTAGACC
TGAATAGAACGCTGGAAATATAAATAATATACTGTACATCATTGACCACA
AAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..144418-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049445 ID=TCONS_00049445|Name=TCONS_00049445|organism=Clytia hemisphaerica|type=transcript|length=9017bp|location=Sequence derived from alignment at scaffold_159:135402..144418- (Clytia hemisphaerica)
CCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAG
TGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGCTTATACT
TTTTACACATCTTTGTGGTGTAAGTTTCATCTACACTGTATTTCACTGTA
TATCATGTNGTTTTAGGCTGAAAGCTGAAATACAGATATAGCTGACCAGG
AACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTGCAAAACAAATA
CAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTACACTCACCCAA
AATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCACGGTGAGAAGT
TGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAAATACGCGTTA
ACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGATAAATATTGA
CAATCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCACAGAGAG
AGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGG
AGGAGCAGAGAGAAAAAAAGAAAATGTGAAAGGATTTTTTTGCGAAGGGT
TTGAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCGTTTCAACAAG
TGATATTATTTATTATTGTACCATGAGCAAGTTGTTCGGGATTCAATGTA
AGATGATTCTTTTGCAAAACATCAATCACTTCTCATGTCATACTACACTG
TGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAAAATTGATGTG
TTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATTTTTATTGGCA
ATTCAGTGGTTTCGAAGTTGATGATTCTAATTATTGTGTAAAACTTTCAA
CCTTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGGTCTTTGGTTT
ATGAACATTATCCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTA
TTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTTTCCACACCCT
TGCTGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTTCATCTACACT
GTATTTCACTGTATATCATGTCACTTATTATTAAGTAGTATGTTTGAACG
TTAATTAGTACAAATAACCTAAAGTTTAGGCAACACTTTGTTTCTAAACA
ATTCACTTTATTTTAGAAGGTGATTTCAACGGCCAACGGCGACAAAGGTA
TGAGTCATTCCTAATACAAACTTTATACTATGCTGCTTTCTATGACGGAA
GGGTTTTTGCGGTGATGAATATTTTGTTCTTAAAACAAACAATAATGACA
CCCTTCATTTCATTTTTACAGAGTCAGTTCATGTGCGCATAAAGCGGCAA
CAAGCGCCACAAAACTACCAACTTCCACCACACCTTCGACAGCCTCAACC
AAACAATAGACAACATTTCAGACTTCCAGCTTATCTGAGACAACCACAAA
CCAACCCTTATCTTAGACAACCTCGACCTGATCCACGATATGCACCCAAC
CGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGAGTCCTAATACTCG
CTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTATCAGCCTCGCCCTG
ACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCAAACCAGCCACGC
CCTACTTCGAATAGGGGTCAACCACCACGTAGACCTGGACCATTTCGTCC
GCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCACCAACAAGACCTG
GAGAAATCTCCATCAATTTCATCAACAAATCTGGCAGGAGAATCAACGTA
AGTTTAACAACAAAGTCTTCTTATTCACCATTCAAAACGTGACCGAGATG
AGCACGTAATTCCCTTTCCACCTTCTTTCATTACAGATGTTCCAGTCCCT
GCCTTACGGTCACGAGACACGCTTCACTTTCACTTTACGACCGAACGAGC
CGCGAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAAGCATATGAT
ATGACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTTGAAAC
ATATCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTACTTCACGTA
AGAAGGCTCTCTCAGTGGAAACAATTCAATATCTATTTAACAAGTAATTT
GAAAAATATTTAGTGTACAGCAATTCTTCTCAAATATCTAATTTTAACTT
TAATTCCTTGCAGCCAACTTACGAGCAGAGCCAGTGAAGCGCGATCGAAG
TGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAATCAATGCTGG
ACCACCATGGTGAACAGAAAGTCATGAATTACACCATCATGCTCATGAAT
TCGGTACGTTAGAGTGCAAAACCTTCTTCAAAGTATAATGAAAATCTTAA
GAAGGTGATTGTTACCATTTTTCATCTTCATCTACAGGTGACGCGGACGT
TTTTGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCAACATT
CACCTTATGAAGAACAAACCGGTCAGTACAACATATATTGTCTCAACACC
ACACACAGTACCAGACCCCTTCATTCACATTGTATTCTTCCCTTTCACAT
TTTCAGTCGTATTACCGTATCGTGACCAATCGTCCGGAAATCAGCGTTCC
CGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACTCGGTGG
ATTTTCATCTCATCTTGACAAGGTATACATATTGCAGCATTTTCTCTAAC
CATTCATTATTTTACATCCCTACATCAATTTCTAATAATTGATCAAGGTA
TTTTCCTAAGATTTTCCAAACCTTCTCTTCAATGGCAGATTTATATAAAA
AGTTGTTTATTCCTTTTCCAAGCTCTATCTCTTGAACTGGAGCAAGAATC
ATCATTTTTAAAAGAGATTTATTTTATTTTCAGGGAGGATATTGGACCAG
CAGGTAAGTTGATTTCTTGAAAAAATTCTCCACCAGTGATTTGCTTATAT
AGATTTTGTACTGCTCAAAAACCTTCTTCACTCAATTTTATCTTTCCAAC
ACACACAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCAGAAGTTGTG
CATTAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATCACTCATGAA
CTTGCACACGCGTAAGTTATACAACAGAGATAGGAGATCTTTATTTATTA
GCTGTTACCCGTTATATTTTCTAACGTTGACCATGTCTACAACACTGTGT
TTTCACACCTTGGTAAAGTTTAAGCAACCGACACTAAGGTTTGCTGGCTG
TTACTTATGATAATAGTTTCCCGATTACCCGATTACCGTAATCCGTTTTT
GTGATTCAGTTTGGGTATCGATCATGACGAGGACGATGGTTGTGGAAGAG
AGAATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTATGCTACCTCT
TCCAATTTTCGATGGTCCAAATGTAGTGCGAAAATGATTTGGCAAAATTT
GAAGTAAGCAAATGTGTCAAAAGAGAACTAATTTTATTGATGAATATTGC
TTTGAAAGAGGTAAATAGAATAAATACCGTAGATAACTAGATAAATAGCA
ATTTCTTTTTCCATTGTTTAGATACTTCACGTGTTTAAAGAACAAACCAA
AAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCAGGGGAGCTG
ATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTCCGCTCTTCC
TTGCACACCCAGGGTTTGTTCCATCATTTTTGTTTTTCATGTATTCTATA
ACAGATATACTCTACTAGAATCGTAAGTTGACATAATTCGATGTGAACTC
ATCATCGAAGGACGATTTGTAGTGTACTCTTTCACAATTTCAGAATCCAT
TGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGTGCACCTTGT
CAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTGCCAAATC
AAAGGTGAGATTTCTTTTGGAGTTTATGTGTCTTATTTAAAGCTTACAGA
CAAAGAGGTAATTAATCATAAAGTTTCTCATAAAAACATGAATTTATCGA
ACAATTTGTGGCTAATTTGGCTAACCATCATCTCTTTTTGGACAGTGGTG
CAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACGGTG
GGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGAAAGTCCACC
AGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGTAAGA
CCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGCCTTGACAGT
ATATTCACAACTGACTATCATACTTTATTCTGATTCTCTTTAACAGGCCG
AGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCGTATTTT
GATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGACAATTGG
TAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATGGAAGAAACA
AACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCTCTTAAGCGG
AGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGAATG
ATAACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCAACGTAGACAA
GGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTCAATGTAAAA
CAACAATCTCCTTAAGAAAATGAAAGTGAACAGGCCTTTGGTGCATCTCA
TCTATAATTTTTATTTTGCAGTAAAGTCGTTAAATTTAACGTGCGATTTT
GAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTG
GAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCCGTTG
ATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAGGCGTCA
TGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGA
ATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTTATCACA
TGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGGCAAG
CATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTA
TCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACC
AAACAATATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGA
CTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGAT
GGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGACTTACCGAC
CATGACCAATATATCTCTGTTTCTTATTAGATCACGATCGAAGCAGTGCG
TGGTAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCTT
ACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAA
GTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAATAAG
TCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTACCT
GTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGATCT
GTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGA
CTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGTTTG
CTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATCAAACCAGTTA
ACGGTGGGTGGTCCAAGTATTCGGAATTCACACCACCCTGCAACCGAAAG
TCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAA
GTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGCCTT
GACAGTATATTCACAACTGACTATCATACTTTATTCTGATTCTCTTTAAC
AGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCG
TATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGAC
AATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATGGAA
GAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCTCTT
AAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTATA
AGAATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAGCGAGCAACGT
AGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTCAAT
GTAAAACATCAATCCCCTTAAGAAAATGAAAGTGAACAGGCCTTTGGTGC
ATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTGAATTTAACGTGC
GATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAA
AGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTT
CCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAG
GCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCAT
TTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTT
ATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGG
GGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAA
GTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTG
GTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCCATCAAAG
GGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGAT
CAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGACTT
ACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCACGATCGAAGC
AGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGATGATATTCAAT
TTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAG
GGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAA
AATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACC
TTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAAC
AGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGA
AGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAA
TGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNGAAATA
CACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGA
TCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCG
AGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTC
ATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTC
AGTTATGTCGATCAGGATGGTCAGAATACTTGCTCCTTTCTTGATGATGA
AAAGAAGGAATTACCGACCATGACCAATATATCTCAATATGTTTCTTATT
AGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCA
ATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCA
AGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTC
AAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCT
CCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCT
TTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGATAA
TTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTAC
CAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAA
CATTTTATTGCAAATGATCCAGATAAAGGTATTGAACCGCATTGAATATC
TTTAATCTTTATTCTCATTCACCAAAGAATGAGAGATAATGACAATTTAT
CATTCTTAATTTTTCAGCCCGTTAACTGTCATGGTGTTATAAATGGCCGA
AAATGCTGACGTTACAAAAATGATTTTTGAGAAAATTTAATGTATTTAAT
CAGTTTTATTTGTAAAACTTATATTTTTATGAAAGAGAATAGAAAAAGTT
TAGACCTGAATAGAACGCTGGAAATATAAATAATATACTGTACATCATTG
ACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049445-exon-scaffold_159-1575043694:144300..144418TCONS_00049445-exon-scaffold_159-1575043694:144300..144418Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:143172..143199TCONS_00049445-exon-scaffold_159-1575043694:143172..143199Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:142572..143047TCONS_00049445-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:142272..142482TCONS_00049445-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:142016..142155TCONS_00049445-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:141848..141931TCONS_00049445-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:141647..141762TCONS_00049445-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:141416..141435TCONS_00049445-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:141208..141310TCONS_00049445-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:140866..141009TCONS_00049445-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:140606..140747TCONS_00049445-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:140365..140475TCONS_00049445-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:140075..140223TCONS_00049445-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:139870..139972TCONS_00049445-exon-scaffold_159-1575043694:139870..139972Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:137562..137673TCONS_00049445-exon-scaffold_159-1575043694:137562..137673Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:137023..137441TCONS_00049445-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:136017..136116TCONS_00049445-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:135728..135861TCONS_00049445-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1575043694:135402..135601TCONS_00049445-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:144300..144418TCONS_00049445-exon-scaffold_159-1510915933:144300..144418Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:143172..143199TCONS_00049445-exon-scaffold_159-1510915933:143172..143199Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:142572..143047TCONS_00049445-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:142272..142482TCONS_00049445-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:142016..142155TCONS_00049445-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:141848..141931TCONS_00049445-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:141647..141762TCONS_00049445-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:141416..141435TCONS_00049445-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:141208..141310TCONS_00049445-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:140866..141009TCONS_00049445-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:140606..140747TCONS_00049445-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:140365..140475TCONS_00049445-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:140075..140223TCONS_00049445-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:139870..139972TCONS_00049445-exon-scaffold_159-1510915933:139870..139972Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:137562..137673TCONS_00049445-exon-scaffold_159-1510915933:137562..137673Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:137023..137441TCONS_00049445-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:136017..136116TCONS_00049445-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:135728..135861TCONS_00049445-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1510915933:135402..135601TCONS_00049445-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:144300..144418TCONS_00049445-exon-scaffold_159-1491911889:144300..144418Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:143172..143199TCONS_00049445-exon-scaffold_159-1491911889:143172..143199Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:142572..143047TCONS_00049445-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:142272..142482TCONS_00049445-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:142016..142155TCONS_00049445-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:141848..141931TCONS_00049445-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:141647..141762TCONS_00049445-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:141416..141435TCONS_00049445-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:141208..141310TCONS_00049445-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:140866..141009TCONS_00049445-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:140606..140747TCONS_00049445-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:140365..140475TCONS_00049445-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:140075..140223TCONS_00049445-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:139870..139972TCONS_00049445-exon-scaffold_159-1491911889:139870..139972Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:137562..137673TCONS_00049445-exon-scaffold_159-1491911889:137562..137673Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:137023..137441TCONS_00049445-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:136017..136116TCONS_00049445-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:135728..135861TCONS_00049445-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049445-exon-scaffold_159-1491911889:135402..135601TCONS_00049445-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..144418 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00118572	0.00221446	0	0.00202045	2.67724e-08	0.0402756	0.0728692	0.0321353	1.52293e-06	1.20294e-06	0.000235355	3.48429e-06	0.383479	2.70726e-06	1.62897	0.525766	2.19806	0.515397	1.16427	1.77661	5.3732	0.00874849	0.000495149	5.50221	7.20025	0.172053	0.00975552	1.096e-06	0.640859	0.0246769
Blast
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BLAST of TCONS_00049445 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.769e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 3 
Query:  927 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 1895
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049445 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS141.769e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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