TCONS_00049446 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049446
Unique NameTCONS_00049446
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2914

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049446 ID=TCONS_00049446|Name=TCONS_00049446|organism=Clytia hemisphaerica|type=transcript|length=2914bp
ATTCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAG
GAGTGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGCTTAT
ACTTTTTACACATCTTTGTGGTGTGATTTCAACGGCCAACGGCGACAAAG
AGTCAGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAA
CTTCCACCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAG
ACTTCCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAAC
CTCGACCTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGT
TTTCCCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCG
ACCTGACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTC
CTAATCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAA
CCACCACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCA
TGGTTACCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCA
TCAACAAATCTGGCAGGAGAATCAACATGTTCCAGTCCCTGCCTTACGGT
CACGAGACACGCTTCACTTTCACTTTACGACCGAACGAGCCGCGAAGGGT
GAGCGTACAACCAGATAATTCTTTCTGGCAAGCATATGATATGACGACAA
GCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTTGAAACATATCTTCTT
CGACAAGGAACGAGTGTAGATGCACGAATTACTTCACCCAACTTACGAGC
AGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAACACAGG
TGGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAGTCATG
AATTACACCATCATGCTCATGAATTCGGTGACGCGGACGTTTTTGCATCG
ATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCAACATTCACCTTATGA
AGAACAAACCGTCGTATTACCGTATCGTGACCAATCGTCCGGAAATCAGC
GTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACTC
GGTGGATTTTCATCTCATCTTGACAAGggaGGATATTGGACCAGCAGGGT
TTGCAGCTATGTATACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAG
GAGAACGGACCCGACACTTCTTTCGTCATCACTCATGAACTTGCACACGC
TTTGGGTATCGATCATGACGAGGACGATGGTTGTGGAAGAGAGAATTTGT
CCGGTGGAAATATTATGGTCAAAAAGTTGTATGCTACCTCTTCCAATTTT
CGATGGTCCAAATGTAGTGCGAAAAtgatttggcaaaatttgaaATACTT
CACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCA
TGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGC
TATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGAATCCATTGACGGC
GTGCAGATATTTATGGTGTCGACCCAATCAGAGTGCACCTTGTCAACCTG
TATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTGCCAAATCAAAGTGG
TGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACGG
TGGGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGAAAGTCCA
CCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGCCG
AGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCGTATTTT
GATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGACAATTGC
TCTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGT
TATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCA
ACGTAGACAAGTAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTG
GATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGC
AAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCAT
CAAGACCAAGACAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAG
GTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATC
ATCTTCTCATCACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAA
GGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCA
AAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAA
GTTGAACTGGCTATCAACATCGAGTATAAGATCACGATCGAAGCAGTGCG
TGGTAATTCATATTACGGAGATATAGCAATTgatgatattcaattttctt
acGGGCTGTGTAATGCAAAGTCAAGTCAAGACGATAAACAGATCTGTACT
AACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCC
TGATGGCTATCCCTGTAAATtaccaaaatcgaaaaataatgTTTGCTTTA
GACAAGTTTGTCAGcccGTTAACTGTCATGGTGTTATAAATGGCCGAAAA
TGCTGACgttacaaaaatgatttttgagaaaatttaatgTATTTAATCag
ttttatttgtaaaacttatatttttatgaaagaGAATAGAAAAAGTTTAG
ACCTGAATAGAACGCTGGAAATATAAATAATATACTGTACATCATTGACC
ACAAAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..144421-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049446 ID=TCONS_00049446|Name=TCONS_00049446|organism=Clytia hemisphaerica|type=transcript|length=9020bp|location=Sequence derived from alignment at scaffold_159:135402..144421- (Clytia hemisphaerica)
ATTCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAG
GAGTGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCTGCTTAT
ACTTTTTACACATCTTTGTGGTGTAAGTTTCATCTACACTGTATTTCACT
GTATATCATGTNGTTTTAGGCTGAAAGCTGAAATACAGATATAGCTGACC
AGGAACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTGCAAAACAA
ATACAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTACACTCACC
CAAAATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCACGGTGAGA
AGTTGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAAATACGCG
TTAACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGATAAATAT
TGACAATCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCACAGA
GAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGTGGTT
TGGAGGAGCAGAGAGAAAAAAAGAAAATGTGAAAGGATTTTTTTGCGAAG
GGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCGTTTCAAC
AAGTGATATTATTTATTATTGTACCATGAGCAAGTTGTTCGGGATTCAAT
GTAAGATGATTCTTTTGCAAAACATCAATCACTTCTCATGTCATACTACA
CTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAAAATTGAT
GTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATTTTTATTG
GCAATTCAGTGGTTTCGAAGTTGATGATTCTAATTATTGTGTAAAACTTT
CAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGGTCTTTGG
TTTATGAACATTATCCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTG
TTATTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTTTCCACAC
CCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTTCATCTAC
ACTGTATTTCACTGTATATCATGTCACTTATTATTAAGTAGTATGTTTGA
ACGTTAATTAGTACAAATAACCTAAAGTTTAGGCAACACTTTGTTTCTAA
ACAATTCACTTTATTTTAGAAGGTGATTTCAACGGCCAACGGCGACAAAG
GTATGAGTCATTCCTAATACAAACTTTATACTATGCTGCTTTCTATGACG
GAAGGGTTTTTGCGGTGATGAATATTTTGTTCTTAAAACAAACAATAATG
ACACCCTTCATTTCATTTTTACAGAGTCAGTTCATGTGCGCATAAAGCGG
CAACAAGCGCCACAAAACTACCAACTTCCACCACACCTTCGACAGCCTCA
ACCAAACAATAGACAACATTTCAGACTTCCAGCTTATCTGAGACAACCAC
AAACCAACCCTTATCTTAGACAACCTCGACCTGATCCACGATATGCACCC
AACCGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGAGTCCTAATAC
TCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTATCAGCCTCGCC
CTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCAAACCAGCCA
CGCCCTACTTCGAATAGGGGTCAACCACCACGTAGACCTGGACCATTTCG
TCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCACCAACAAGAC
CTGGAGAAATCTCCATCAATTTCATCAACAAATCTGGCAGGAGAATCAAC
GTAAGTTTAACAACAAAGTCTTCTTATTCACCATTCAAAACGTGACCGAG
ATGAGCACGTAATTCCCTTTCCACCTTCTTTCATTACAGATGTTCCAGTC
CCTGCCTTACGGTCACGAGACACGCTTCACTTTCACTTTACGACCGAACG
AGCCGCGAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAAGCATAT
GATATGACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTTGA
AACATATCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTACTTCAC
GTAAGAAGGCTCTCTCAGTGGAAACAATTCAATATCTATTTAACAAGTAA
TTTGAAAAATATTTAGTGTACAGCAATTCTTCTCAAATATCTAATTTTAA
CTTTAATTCCTTGCAGCCAACTTACGAGCAGAGCCAGTGAAGCGCGATCG
AAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAATCAATGC
TGGACCACCATGGTGAACAGAAAGTCATGAATTACACCATCATGCTCATG
AATTCGGTACGTTAGAGTGCAAAACCTTCTTCAAAGTATAATGAAAATCT
TAAGAAGGTGATTGTTACCATTTTTCATCTTCATCTACAGGTGACGCGGA
CGTTTTTGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCAAC
ATTCACCTTATGAAGAACAAACCGGTCAGTACAACATATATTGTCTCAAC
ACCACACACAGTACCAGACCCCTTCATTCACATTGTATTCTTCCCTTTCA
CATTTTCAGTCGTATTACCGTATCGTGACCAATCGTCCGGAAATCAGCGT
TCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACAACTCGG
TGGATTTTCATCTCATCTTGACAAGGTATACATATTGCAGCATTTTCTCT
AACCATTCATTATTTTACATCCCTACATCAATTTCTAATAATTGATCAAG
GTATTTTCCTAAGATTTTCCAAACCTTCTCTTCAATGGCAGATTTATATA
AAAAGTTGTTTATTCCTTTTCCAAGCTCTATCTCTTGAACTGGAGCAAGA
ATCATCATTTTTAAAAGAGATTTATTTTATTTTCAGGGAGGATATTGGAC
CAGCAGGTAAGTTGATTTCTTGAAAAAATTCTCCACCAGTGATTTGCTTA
TATAGATTTTGTACTGCTCAAAAACCTTCTTCACTCAATTTTATCTTTCC
AACACACACAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCAGAAGTT
GTGCATTAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATCACTCAT
GAACTTGCACACGCGTAAGTTATACAACAGAGATAGGAGATCTTTATTTA
TTAGCTGTTACCCGTTATATTTTCTAACGTTGACCATGTCTACAACACTG
TGTTTTCACACCTTGGTAAAGTTTAAGCAACCGACACTAAGGTTTGCTGG
CTGTTACTTATGATAATAGTTTCCCGATTACCCGATTACCGTAATCCGTT
TTTGTGATTCAGTTTGGGTATCGATCATGACGAGGACGATGGTTGTGGAA
GAGAGAATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTATGCTACC
TCTTCCAATTTTCGATGGTCCAAATGTAGTGCGAAAATGATTTGGCAAAA
TTTGAAGTAAGCAAATGTGTCAAAAGAGAACTAATTTTATTGATGAATAT
TGCTTTGAAAGAGGTAAATAGAATAAATACCGTAGATAACTAGATAAATA
GCAATTTCTTTTTCCATTGTTTAGATACTTCACGTGTTTAAAGAACAAAC
CAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCAGGGGAG
CTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTCCGCTCT
TCCTTGCACACCCAGGGTTTGTTCCATCATTTTTGTTTTTCATGTATTCT
ATAACAGATATACTCTACTAGAATCGTAAGTTGACATAATTCGATGTGAA
CTCATCATCGAAGGACGATTTGTAGTGTACTCTTTCACAATTTCAGAATC
CATTGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGTGCACCT
TGTCAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTGCCAA
ATCAAAGGTGAGATTTCTTTTGGAGTTTATGTGTCTTATTTAAAGCTTAC
AGACAAAGAGGTAATTAATCATAAAGTTTCTCATAAAAACATGAATTTAT
CGAACAATTTGTGGCTAATTTGGCTAACCATCATCTCTTTTTGGACAGTG
GTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAGTTAACG
GTGGGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGAAAGTCC
ACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCCCAAGTA
AGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGCCTTGAC
AGTATATTCACAACTGACTATCATACTTTATTCTGATTCTCTTTAACAGG
CCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATATCGTAT
TTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGCGACAAT
TGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATGGAAGAA
ACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCTCTTAAG
CGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGA
ATGATAACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCAACGTAGA
CAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTCAATGTA
AAACAACAATCTCCTTAAGAAAATGAAAGTGAACAGGCCTTTGGTGCATC
TCATCTATAATTTTTATTTTGCAGTAAAGTCGTTAAATTTAACGTGCGAT
TTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAGG
GTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCCG
TTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAGGCG
TCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTTT
GGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTTATC
ACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGGC
AAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTG
GTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTC
ACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGT
TGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAG
GATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGACTTACC
GACCATGACCAATATATCTCTGTTTCTTATTAGATCACGATCGAAGCAGT
GCGTGGTAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTT
CTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGA
AAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAAT
AAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTA
CCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGA
TCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGG
AGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGT
TTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATCAAACCAG
TTAACGGTGGGTGGTCCAAGTATTCGGAATTCACACCACCCTGCAACCGA
AAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCC
CAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGC
CTTGACAGTATATTCACAACTGACTATCATACTTTATTCTGATTCTCTTT
AACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATA
TCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGC
GACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATG
GAAGAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCT
CTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTT
ATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAGCGAGCAA
CGTAGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTC
AATGTAAAACATCAATCCCCTTAAGAAAATGAAAGTGAACAGGCCTTTGG
TGCATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTGAATTTAACG
TGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGT
CAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTC
CTTCCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTT
GAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGT
CATTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCG
CTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGA
AGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGA
TAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGG
TTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCCATCA
AAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTC
GATCAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGA
CTTACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCACGATCGA
AGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGATGATATTC
AATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCG
AAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGA
TAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAA
ACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATA
AACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTT
CGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAA
TAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNGAA
ATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGG
CGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACA
TCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTCCA
TTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTT
CTCAGTTATGTCGATCAGGATGGTCAGAATACTTGCTCCTTTCTTGATGA
TGAAAAGAAGGAATTACCGACCATGACCAATATATCTCAATATGTTTCTT
ATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATA
GCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAG
TCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTT
CTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGG
TCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTT
TCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGA
TAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAAT
TACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAAT
AAACATTTTATTGCAAATGATCCAGATAAAGGTATTGAACCGCATTGAAT
ATCTTTAATCTTTATTCTCATTCACCAAAGAATGAGAGATAATGACAATT
TATCATTCTTAATTTTTCAGCCCGTTAACTGTCATGGTGTTATAAATGGC
CGAAAATGCTGACGTTACAAAAATGATTTTTGAGAAAATTTAATGTATTT
AATCAGTTTTATTTGTAAAACTTATATTTTTATGAAAGAGAATAGAAAAA
GTTTAGACCTGAATAGAACGCTGGAAATATAAATAATATACTGTACATCA
TTGACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049446-exon-scaffold_159-1575043694:144300..144421TCONS_00049446-exon-scaffold_159-1575043694:144300..144421Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:143172..143199TCONS_00049446-exon-scaffold_159-1575043694:143172..143199Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:142572..143047TCONS_00049446-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:142272..142482TCONS_00049446-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:142016..142155TCONS_00049446-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:141848..141931TCONS_00049446-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:141647..141762TCONS_00049446-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:141416..141435TCONS_00049446-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:141208..141310TCONS_00049446-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:140866..141009TCONS_00049446-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:140606..140747TCONS_00049446-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:140365..140475TCONS_00049446-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:140075..140223TCONS_00049446-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:139870..139972TCONS_00049446-exon-scaffold_159-1575043694:139870..139972Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:139668..139779TCONS_00049446-exon-scaffold_159-1575043694:139668..139779Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:137023..137441TCONS_00049446-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:136017..136116TCONS_00049446-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:135728..135861TCONS_00049446-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1575043694:135402..135601TCONS_00049446-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:144300..144421TCONS_00049446-exon-scaffold_159-1510915933:144300..144421Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:143172..143199TCONS_00049446-exon-scaffold_159-1510915933:143172..143199Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:142572..143047TCONS_00049446-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:142272..142482TCONS_00049446-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:142016..142155TCONS_00049446-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:141848..141931TCONS_00049446-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:141647..141762TCONS_00049446-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:141416..141435TCONS_00049446-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:141208..141310TCONS_00049446-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:140866..141009TCONS_00049446-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:140606..140747TCONS_00049446-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:140365..140475TCONS_00049446-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:140075..140223TCONS_00049446-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:139870..139972TCONS_00049446-exon-scaffold_159-1510915933:139870..139972Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:139668..139779TCONS_00049446-exon-scaffold_159-1510915933:139668..139779Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:137023..137441TCONS_00049446-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:136017..136116TCONS_00049446-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:135728..135861TCONS_00049446-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1510915933:135402..135601TCONS_00049446-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:144300..144421TCONS_00049446-exon-scaffold_159-1491911889:144300..144421Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:143172..143199TCONS_00049446-exon-scaffold_159-1491911889:143172..143199Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:142572..143047TCONS_00049446-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:142272..142482TCONS_00049446-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:142016..142155TCONS_00049446-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:141848..141931TCONS_00049446-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:141647..141762TCONS_00049446-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:141416..141435TCONS_00049446-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:141208..141310TCONS_00049446-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:140866..141009TCONS_00049446-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:140606..140747TCONS_00049446-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:140365..140475TCONS_00049446-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:140075..140223TCONS_00049446-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:139870..139972TCONS_00049446-exon-scaffold_159-1491911889:139870..139972Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:139668..139779TCONS_00049446-exon-scaffold_159-1491911889:139668..139779Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:137023..137441TCONS_00049446-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:136017..136116TCONS_00049446-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:135728..135861TCONS_00049446-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049446-exon-scaffold_159-1491911889:135402..135601TCONS_00049446-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..144421 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000277117	0.000543439	0	0.000507518	0	0	0.636499	1.04447	2.79082e-06	1.12871e-06	3.1497	4.8611e-07	0.257459	9.85545e-06	0.868886	0.242359	1.56757	0.713192	1.31653	3.17494	6.49768	0.00963095	0.00128644	3.08133	0	0	0.0214018	0	1.06627	0.0455092
Blast
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BLAST of TCONS_00049446 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 1.776e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 3 
Query:  930 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 1898
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049446 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS141.776e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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