TCONS_00049455 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049455
Unique NameTCONS_00049455
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3048

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049455 ID=TCONS_00049455|Name=TCONS_00049455|organism=Clytia hemisphaerica|type=transcript|length=3048bp
AAAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGA
CTTTCAGCGTGGTTTGGAGGAgcagagagaaaaaaagaaaagACATTAAA
AGAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAATGCTGAGTT
TAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTG
GGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGT
GGTAAGGTGATTTCAACGGCCAACGGCGACAAAGAGTCAGTTCATGTGCG
CATAAAGCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACACCTTC
GACAGCCTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTTATCTG
AGACAACCACAAACCAACCCTTATCTTAGACAACCTCGACCTGATCCACG
ATATGCACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGA
GTCCTAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTAT
CAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCC
AAACCAGCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAGACCTG
GACCATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCA
CCAACAAGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCTGGCAG
GAGAATCAACATGTTCCAGTCCCTGCCTTACGGTCACGAGACACGCTTCA
CTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAACCAGAT
AATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTCTACAT
CAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAACGAGTG
TAGATGCACGAATTACTTCACCCAACTTACGAGCAGAGCCAGTGAAGCGC
GATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAATC
AATGCTGGACCACCATGGTGAACAGAAAGTCATGAATTACACCATCATGC
TCATGAATTCGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAGCGCCC
ATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCGTCGTA
TTACCGTATCGTGACCAATCGTCCGGAAATCAGCGTTCCCGGAGCATGTC
GGTATTCAAGAGAAGTTGCTCAACGTAACAACTCGGTGGATTTTCATCTC
ATCTTGACAAGggaGGATATTGGACCAGCAGGGTTTGCAGCTATGTATAC
AATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGACCCGACA
CTTCTTTCGTCATCACTCATGAACTTGCACACGCTTTGGGTATCGATCAT
GACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATATTAT
GGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAATGTA
GTGCGAAAAtgatttggcaaaatttgaaATACTTCACGTGTTTAAAGAAC
AAACCAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCAGG
GGAGCTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTCCG
CTCTTCCTTGCACACCCAGGAATCCATTGACGGCGTGCAGATATTTATGG
TGTCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCTCC
TTTGGAAGGCTCAACGTGTGCCAAATCAAAGTGGTGCAAAAGAGGGCGTT
GTGTGACCAAGATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATAT
TCGGAATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCA
ACATCGAAACAGAAGTTGCACCAATCCCAAGCCGAGGTTATCAGGGAAGA
AATGTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAAT
GGGATTTGCAAGCCTTTCAACATGCGACAATTGCTCTTAAGCGGAGAAAT
CGATTGGGAAAACATACGACAGAACGGGTGCAGTTATAAGAATGATAACG
TCACTAAATGGAGAGTTTATCGCGAAAGCGAGCAACGTAGACAAGTAAAG
TCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAA
TTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCT
CACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGG
AAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAG
GAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAG
TGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTA
GAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAA
AGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCA
ACATCGAGTATAAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTAC
GGAGATATAGCAATTgatgatattcaattttcttacGGGCTGTGTAATGC
AAAGTCAAGTCAAGACGATAAACAGATCTGTACTAACGTGTGTATTACCC
AAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGT
AAATtaccaaaatcgaaaaataatgTTTGCTTTAGACAAGTTTGTCAGcc
cGTTAACTGTCATGGTGTTATAAATGGCCGAAAATGCTGACgttacaaaa
atgatttttgagaaaatttaatgTATTTAATCagttttatttgtaaaact
tatatttttatgaaagaGAATAGAAAAAGTTTAGACCTGAATAGAACGCT
GGAAATATAAATAATATACTGTACATCATTGACCACAAAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..144897-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049455 ID=TCONS_00049455|Name=TCONS_00049455|organism=Clytia hemisphaerica|type=transcript|length=9496bp|location=Sequence derived from alignment at scaffold_159:135402..144897- (Clytia hemisphaerica)
AAAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGA
CTTTCAGCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAAGGTGAAAGG
ATTTTTTTGCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGT
ATTTTCGTTTCAACAAGTGATATTATTTATTATTGTACCATGAGCAAGTT
GTTCGGGATTCAATGTAAGATGACTCTTTTGCAAAACATCAATCACTTCT
CATGTCATACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGT
TTTGAAAAATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACT
CGAGATTTTTATTGGCAATTCAGTGGTTTCGAAGTTAATGATTCTAATTA
TTGTGTAACACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAA
TATTTGGTCTTTGGTTTATGAACATTATTCCACCAAATGCTGAGTTTAGA
ATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGAGG
ATGTTTTCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGT
AAGTTTCATCTACACTGTATTTCACTGTATATCATGTNGTTTTAGGCTGA
AAGCTGAAATACAGATATAGCTGACCAGGAACAGACCCAATGGTATGCAG
TACTCATTTTGTCTTGTGCAAAACAAATACAAACAGAAGAAGATAATCTC
CAAGTCTCCGAATGTTTACACTCACCCAAAATAAAGCTCAAAGAAATTAT
TGTACTTGATTGATATCACGGTGAGAAGTTGGAAAAGCCATGCTAAAAGA
CACGAAAATGGTGATGGAAATACGCGTTAACAAAGATAAGTAACGCTTAA
TAAACGCTGGCTGATTTGATAAATATTGACAATCACTTCAAACAAAGAAT
TTCACACTCACAAAAAATCGCACAGAGAGAGCTTGGTTGGTTCAGGAACA
GTTCCTTATTGACTTTCAGCGTGGTTTGGAGGAGCAGAGAGAAAAAAAGA
AAATGTGAAAGGATTTTTTTGCGAAGGGTTTGAGTCATGATAATAAAACG
CGTTTGTTGAGTATTTTCGTTTCAACAAGTGATATTATTTATTATTGTAC
CATGAGCAAGTTGTTCGGGATTCAATGTAAGATGATTCTTTTGCAAAACA
TCAATCACTTCTCATGTCATACTACACTGTGTACTACAAAAAAGAAAGCA
AGAAAAAAAAGTTTTGAAAAATTGATGTGTTGTTGAATTGAAAAAGCTGG
AAGTTTGAAACTCGAGATTTTTATTGGCAATTCAGTGGTTTCGAAGTTGA
TGATTCTAATTATTGTGTAAAACTTTCAACCTTGTTCCTTTCTTTCTTAG
ACATTAAAAGAATATTTGGTCTTTGGTTTATGAACATTATCCCACCAAAT
GCTGAGTTTAGAATAAAGTGATCGTGTTATTTGGATAGGAGTGGTGTATC
TTTTTTTGGGAGGATGTTTTCCACACCCTTGCTGCTTATACTTTTTACAC
ATCTTTGTGGTGTAAGTTTCATCTACACTGTATTTCACTGTATATCATGT
CACTTATTATTAAGTAGTATGTTTGAACGTTAATTAGTACAAATAACCTA
AAGTTTAGGCAACACTTTGTTTCTAAACAATTCACTTTATTTTAGAAGGT
GATTTCAACGGCCAACGGCGACAAAGGTATGAGTCATTCCTAATACAAAC
TTTATACTATGCTGCTTTCTATGACGGAAGGGTTTTTGCGGTGATGAATA
TTTTGTTCTTAAAACAAACAATAATGACACCCTTCATTTCATTTTTACAG
AGTCAGTTCATGTGCGCATAAAGCGGCAACAAGCGCCACAAAACTACCAA
CTTCCACCACACCTTCGACAGCCTCAACCAAACAATAGACAACATTTCAG
ACTTCCAGCTTATCTGAGACAACCACAAACCAACCCTTATCTTAGACAAC
CTCGACCTGATCCACGATATGCACCCAACCGACCAAGACCAAATCCACGT
TTTCCCAATCCGCCGAGTCCTAATACTCGCTTCCCTCAAAATCAGCCTCG
ACCTGACCCAAGGTATCAGCCTCGCCCTGACCCAAGGTACCAGCCTCGTC
CTAATCCTCGTTATCCAAACCAGCCACGCCCTACTTCGAATAGGGGTCAA
CCACCACGTAGACCTGGACCATTTCGTCCGCCTCCTTTAAGAGATTTGCA
TGGTTACCAACAATCACCAACAAGACCTGGAGAAATCTCCATCAATTTCA
TCAACAAATCTGGCAGGAGAATCAACGTAAGTTTAACAACAAAGTCTTCT
TATTCACCATTCAAAACGTGACCGAGATGAGCACGTAATTCCCTTTCCAC
CTTCTTTCATTACAGATGTTCCAGTCCCTGCCTTACGGTCACGAGACACG
CTTCACTTTCACTTTACGACCGAACGAGCCGCGAAGGGTGAGCGTACAAC
CAGATAATTCTTTCTGGCAAGCATATGATATGACGACAAGCTTTCCTCTC
TACATCAATGGTCAGCCGAGCCTTGAAACATATCTTCTTCGACAAGGAAC
GAGTGTAGATGCACGAATTACTTCACGTAAGAAGGCTCTCTCAGTGGAAA
CAATTCAATATCTATTTAACAAGTAATTTGAAAAATATTTAGTGTACAGC
AATTCTTCTCAAATATCTAATTTTAACTTTAATTCCTTGCAGCCAACTTA
CGAGCAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTTTATCGAAAC
ACAGGTGGTGGTGGACAAATCAATGCTGGACCACCATGGTGAACAGAAAG
TCATGAATTACACCATCATGCTCATGAATTCGGTACGTTAGAGTGCAAAA
CCTTCTTCAAAGTATAATGAAAATCTTAAGAAGGTGATTGTTACCATTTT
TCATCTTCATCTACAGGTGACGCGGACGTTTTTGCATCGATCGTTCGGAG
CGCCCATCTACGTTTCTGTTGTCAACATTCACCTTATGAAGAACAAACCG
GTCAGTACAACATATATTGTCTCAACACCACACACAGTACCAGACCCCTT
CATTCACATTGTATTCTTCCCTTTCACATTTTCAGTCGTATTACCGTATC
GTGACCAATCGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAG
AGAAGTTGCTCAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAA
GGTATACATATTGCAGCATTTTCTCTAACCATTCATTATTTTACATCCCT
ACATCAATTTCTAATAATTGATCAAGGTATTTTCCTAAGATTTTCCAAAC
CTTCTCTTCAATGGCAGATTTATATAAAAAGTTGTTTATTCCTTTTCCAA
GCTCTATCTCTTGAACTGGAGCAAGAATCATCATTTTTAAAAGAGATTTA
TTTTATTTTCAGGGAGGATATTGGACCAGCAGGTAAGTTGATTTCTTGAA
AAAATTCTCCACCAGTGATTTGCTTATATAGATTTTGTACTGCTCAAAAA
CCTTCTTCACTCAATTTTATCTTTCCAACACACACAGGGTTTGCAGCTAT
GTATACAATGTGTAGTCGCAGAAGTTGTGCATTAGTCAAGGAGAACGGAC
CCGACACTTCTTTCGTCATCACTCATGAACTTGCACACGCGTAAGTTATA
CAACAGAGATAGGAGATCTTTATTTATTAGCTGTTACCCGTTATATTTTC
TAACGTTGACCATGTCTACAACACTGTGTTTTCACACCTTGGTAAAGTTT
AAGCAACCGACACTAAGGTTTGCTGGCTGTTACTTATGATAATAGTTTCC
CGATTACCCGATTACCGTAATCCGTTTTTGTGATTCAGTTTGGGTATCGA
TCATGACGAGGACGATGGTTGTGGAAGAGAGAATTTGTCCGGTGGAAATA
TTATGGTCAAAAAGTTGTATGCTACCTCTTCCAATTTTCGATGGTCCAAA
TGTAGTGCGAAAATGATTTGGCAAAATTTGAAGTAAGCAAATGTGTCAAA
AGAGAACTAATTTTATTGATGAATATTGCTTTGAAAGAGGTAAATAGAAT
AAATACCGTAGATAACTAGATAAATAGCAATTTCTTTTTCCATTGTTTAG
ATACTTCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCACATTCAAAA
AAAGCATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAGATCAATGT
CGAAGCTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGGGTTTGTTC
CATCATTTTTGTTTTTCATGTATTCTATAACAGATATACTCTACTAGAAT
CGTAAGTTGACATAATTCGATGTGAACTCATCATCGAAGGACGATTTGTA
GTGTACTCTTTCACAATTTCAGAATCCATTGACGGCGTGCAGATATTTAT
GGTGTCGACCCAATCAGAGTGCACCTTGTCAACCTGTATGGTGGCATGCT
CCTTTGGAAGGCTCAACGTGTGCCAAATCAAAGGTGAGATTTCTTTTGGA
GTTTATGTGTCTTATTTAAAGCTTACAGACAAAGAGGTAATTAATCATAA
AGTTTCTCATAAAAACATGAATTTATCGAACAATTTGTGGCTAATTTGGC
TAACCATCATCTCTTTTTGGACAGTGGTGCAAAAGAGGGCGTTGTGTGAC
CAAGATGAAGATCAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAAT
TCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGA
AACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAA
GCTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGACTATCAT
ACTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGT
CAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAATGGGAT
TTGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAACAAGAGA
AAGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCATCACCTT
TTTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACAT
ACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAG
TTTATCGCGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATGTTTTAC
GTTCTTTCATTGGATTCGTCAATGTAAAACAACAATCTCCTTAAGAAAAT
GAAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAG
TAAAGTCGTTAAATTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGG
AAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAAC
GCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGA
CAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCT
CTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTTCTCATC
ACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCT
CGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGT
AAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGC
TATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTT
TAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTA
TTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTT
CTTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATCTCTGTT
TCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGA
TATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGT
CAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTA
TTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAA
ATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTT
CTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTACCC
AAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGT
AAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGT
AAATAAACATTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAGATCAAACCAGTTAACGGTGGGTGGTCCAAGTATT
CGGAATTCACACCACCCTGCAACCGAAAGTCCACCAGATGGATTGTTCAA
CATCGAAACAGAAGTTGCACCAATCCCAAGTAAGACCCAAAATAAATCTC
TTCGAAGCTTCCATTCCAAACCCAGCCTTGACAGTATATTCACAACTGAC
TATCATACTTTATTCTGATTCTCTTTAACAGGCCGAGGTTATCAGGGAAG
AAATGTCAAGGTAGTCCCAATCAATATCGTATTTTGATCCCAGGAAGGAA
TGGGATTTGCAAGCCTTTCAACATGCGACAATTGGTAAGCAATCTTCAAC
AAGAGAAAGTAGAAGGCACCATGATGGAAGAAACAAACTATTCTTCTCAT
CACCTTTTTATTCTTCTGATTCAGCTCTTAAGCGGAGAAATCGATTGGGA
AAACATACGACAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAAT
GGAGAGTTTATCGAGAAAGCGAGCAACGTAGACAAGGTAAGATCATTATG
TTTTACGTTCTTTCATTGGATTCGTCAATGTAAAACATCAATCCCCTTAA
GAAAATGAAAGTGAACAGGCCTTTGGTGCATCTCATCTATAATTTTTATT
TTGCAGTAAAGTCGTTGAATTTAACGTGCGATTTTGAAAGCCCTGGATGC
GGATGGAAGAATTCAAAGAAGGGCGTCAAAGGGTGGAATATTGGCAAAGG
AGCAACGCCCTCACACCGAACAGGTCCTTCCGTTGATAACACCATCAAGA
CCAAGACAGGGAAATATCTTTACTTTGAGGCGTCATGGGTGTCAGGTACC
ACCCCTCTGAGGAGAGGGTCACGTGTCATTTTGGAATCACCTATCATCTT
CTCATCACAAGTGTGTATGAAATTCGCTTATCACATGTATGGAAAGGGTG
TTGGCTCGTTAGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATG
TGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGA
ACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAAC
TCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTA
CCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAACACTTGC
TCCTTTCTTGATGATGAAAAGAAGGACTTACCGACCATGACCAATATATC
TCTGTTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTA
CGGAGATATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATG
CAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGAT
GAAGTATTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGA
GCTTAAATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCT
TTTCTTCTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTA
TTACCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTAT
CCCTGTAAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTG
TCAGGTAAATAAACATTTTATTNGAAATACACATTCGAAGGGGCAAGCAT
TCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGTGGTATCA
AGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGGTTGGTCACCAAA
CAATATAATAACTCACTTTAAGTCCATTCATTCCATCAAAGGGTTGACTG
TTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTCGATCAGGATGGT
CAGAATACTTGCTCCTTTCTTGATGATGAAAAGAAGGAATTACCGACCAT
GACCAATATATCTCAATATGTTTCTTATTAGATCACGATCGAAGCAGTGC
GTGGTAATTCATATTACGGAGATATAGCAATTGATGATATTCAATTTTCT
TACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCGAAGGGAAA
AGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGATAAAATAA
GTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAAACCTTACC
TGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATAAACAGATC
TGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTTCGAAGGAG
ACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAATAATGTTT
GCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTGCAAATGATCCA
GATAAAGGTATTGAACCGCATTGAATATCTTTAATCTTTATTCTCATTCA
CCAAAGAATGAGAGATAATGACAATTTATCATTCTTAATTTTTCAGCCCG
TTAACTGTCATGGTGTTATAAATGGCCGAAAATGCTGACGTTACAAAAAT
GATTTTTGAGAAAATTTAATGTATTTAATCAGTTTTATTTGTAAAACTTA
TATTTTTATGAAAGAGAATAGAAAAAGTTTAGACCTGAATAGAACGCTGG
AAATATAAATAATATACTGTACATCATTGACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049455-exon-scaffold_159-1575043694:144806..144897TCONS_00049455-exon-scaffold_159-1575043694:144806..144897Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:144425..144459TCONS_00049455-exon-scaffold_159-1575043694:144425..144459Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:143337..143462TCONS_00049455-exon-scaffold_159-1575043694:143337..143462Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:143172..143202TCONS_00049455-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:142572..143047TCONS_00049455-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:142272..142482TCONS_00049455-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:142016..142155TCONS_00049455-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:141848..141931TCONS_00049455-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:141647..141762TCONS_00049455-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:141416..141435TCONS_00049455-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:141208..141310TCONS_00049455-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:140866..141009TCONS_00049455-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:140606..140747TCONS_00049455-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:140365..140475TCONS_00049455-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:140075..140223TCONS_00049455-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:139870..139972TCONS_00049455-exon-scaffold_159-1575043694:139870..139972Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:139668..139779TCONS_00049455-exon-scaffold_159-1575043694:139668..139779Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:137023..137441TCONS_00049455-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:136017..136116TCONS_00049455-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:135728..135861TCONS_00049455-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1575043694:135402..135601TCONS_00049455-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:144806..144897TCONS_00049455-exon-scaffold_159-1510915933:144806..144897Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:144425..144459TCONS_00049455-exon-scaffold_159-1510915933:144425..144459Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:143337..143462TCONS_00049455-exon-scaffold_159-1510915933:143337..143462Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:143172..143202TCONS_00049455-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:142572..143047TCONS_00049455-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:142272..142482TCONS_00049455-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:142016..142155TCONS_00049455-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:141848..141931TCONS_00049455-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:141647..141762TCONS_00049455-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:141416..141435TCONS_00049455-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:141208..141310TCONS_00049455-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:140866..141009TCONS_00049455-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:140606..140747TCONS_00049455-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:140365..140475TCONS_00049455-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:140075..140223TCONS_00049455-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:139870..139972TCONS_00049455-exon-scaffold_159-1510915933:139870..139972Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:139668..139779TCONS_00049455-exon-scaffold_159-1510915933:139668..139779Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:137023..137441TCONS_00049455-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:136017..136116TCONS_00049455-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:135728..135861TCONS_00049455-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1510915933:135402..135601TCONS_00049455-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:144806..144897TCONS_00049455-exon-scaffold_159-1491911889:144806..144897Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:144425..144459TCONS_00049455-exon-scaffold_159-1491911889:144425..144459Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:143337..143462TCONS_00049455-exon-scaffold_159-1491911889:143337..143462Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:143172..143202TCONS_00049455-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:142572..143047TCONS_00049455-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:142272..142482TCONS_00049455-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:142016..142155TCONS_00049455-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:141848..141931TCONS_00049455-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:141647..141762TCONS_00049455-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:141416..141435TCONS_00049455-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:141208..141310TCONS_00049455-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:140866..141009TCONS_00049455-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:140606..140747TCONS_00049455-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:140365..140475TCONS_00049455-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:140075..140223TCONS_00049455-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:139870..139972TCONS_00049455-exon-scaffold_159-1491911889:139870..139972Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:139668..139779TCONS_00049455-exon-scaffold_159-1491911889:139668..139779Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:137023..137441TCONS_00049455-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:136017..136116TCONS_00049455-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:135728..135861TCONS_00049455-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049455-exon-scaffold_159-1491911889:135402..135601TCONS_00049455-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..144897 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	8.93047e-09	1.50833	0.844806	1.37689	0.350404	5.42125	6.6742	3.27643	3.04286	2.09672	5.11437	8.24984	13.2867	3.5162	6.67189	2.60177	2.43499	0	2.30574e-09	1.40771	2.55158e-05	1.91658	4.98708
Blast
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BLAST of TCONS_00049455 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.089e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 2 
Query: 1064 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 2032
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049455 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS142.089e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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