TCONS_00049459 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049459
Unique NameTCONS_00049459
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3079

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049459 ID=TCONS_00049459|Name=TCONS_00049459|organism=Clytia hemisphaerica|type=transcript|length=3079bp
ATCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCACAGAGAGAG
CTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGGAG
GAgcagagagaaaaaaagaaaagACATTAAAAGAATATTTGGTCTTTGGT
TTATGAACATTATCCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGT
TATTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTTTCCACACC
CTTGCTGCTTATACTTTTTACACATCTTTGTGGTAAGGTGATTTCAACGG
CCAACGGCGACAAAGAGTCAGTTCATGTGCGCATAAAGCGGCAACAAGCG
CCACAAAACTACCAACTTCCACCACACCTTCGACAGCCTCAACCAAACAA
TAGACAACATTTCAGACTTCCAGCTTATCTGAGACAACCACAAACCAACC
CTTATCTTAGACAACCTCGACCTGATCCACGATATGCACCCAACCGACCA
AGACCAAATCCACGTTTTCCCAATCCGCCGAGTCCTAATACTCGCTTCCC
TCAAAATCAGCCTCGACCTGACCCAAGGTATCAGCCTCGCCCTGACCCAA
GGTACCAGCCTCGTCCTAATCCTCGTTATCCAAACCAGCCACGCCCTACT
TCGAATAGGGGTCAACCACCACGTAGACCTGGACCATTTCGTCCGCCTCC
TTTAAGAGATTTGCATGGTTACCAACAATCACCAACAAGACCTGGAGAAA
TCTCCATCAATTTCATCAACAAATCTGGCAGGAGAATCAACATGTTCCAG
TCCCTGCCTTACGGTCACGAGACACGCTTCACTTTCACTTTACGACCGAA
CGAGCCGCGAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAAGCAT
ATGATATGACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTT
GAAACATATCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTACTTC
ACCCAACTTACGAGCAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCT
TTATCGAAACACAGGTGGTGGTGGACAAATCAATGCTGGACCACCATGGT
GAACAGAAAGTCATGAATTACACCATCATGCTCATGAATTCGGTGACGCG
GACGTTTTTGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCA
ACATTCACCTTATGAAGAACAAACCGTCGTATTACCGTATCGTGACCAAT
CGTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGC
TCAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAAGggaGGATA
TTGGACCAGCAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCAGAAGT
TGTGCATTAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATCACTCA
TGAACTTGCACACGCTTTGGGTATCGATCATGACGAGGACGATGGTTGTG
GAAGAGAGAATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTATGCT
ACCTCTTCCAATTTTCGATGGTCCAAATGTAGTGCGAAAAtgatttggca
aaatttgaaATACTTCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCA
CATTCAAAAAAAGCATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAA
GATCAATGTCGAAGCTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAG
GAATCCATTGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGTG
CACCTTGTCAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGT
GCCAAATCAAAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGAT
CAAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAATTCACACCACCCT
GCAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGC
ACCAATCCCAAGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAA
TCAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCA
ACATGCGACAATTGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGA
CAGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTA
TCGAGAAAGCGAGCAACGTAGACAAGTAAAGTCGTTGAATTTAACGTGCG
ATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAA
GGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTC
CGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAGG
CGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATT
TTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTTA
TCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGG
GCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAG
TGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGATCAC
GATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTgatg
atattcaattttcttacGGGCTGTGTAATGCAAAGTCAAGTCAAGACGAT
AAACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGT
TCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATtaccaaaatcgaaaa
ataatgTTTGCTTTAGACAAGTTTGTCAGcccGTTAACTGTCATGGTGTT
ATAAATGGCCGAAAATGCTGACgttacaaaaatgatttttgagaaaattt
aatgTATTTAATCagttttatttgtaaaacttatatttttatgaaagaGA
ATAGAAAAAGTTTAGACCTGAATAGAACGCTGGAAATATAAATAATATAC
TGTACATCATTGACCACAAAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..144928-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049459 ID=TCONS_00049459|Name=TCONS_00049459|organism=Clytia hemisphaerica|type=transcript|length=9527bp|location=Sequence derived from alignment at scaffold_159:135402..144928- (Clytia hemisphaerica)
ATCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCACAGAGAGAG
CTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGGAG
GAGCAGAGAGAAAAAAAGAAAAGGTGAAAGGATTTTTTTGCGAAGGGTTT
GAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCGTTTCAACAAGTG
ATATTATTTATTATTGTACCATGAGCAAGTTGTTCGGGATTCAATGTAAG
ATGACTCTTTTGCAAAACATCAATCACTTCTCATGTCATACTACACTGTG
TACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAAAATTGATGTGTT
GTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATTTTTATTGGCAAT
TCAGTGGTTTCGAAGTTAATGATTCTAATTATTGTGTAACACTTTCAACC
TTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGGTCTTTGGTTTAT
GAACATTATTCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATT
TGGATAGGAGTGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGC
TGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTTCATCTACACTGTA
TTTCACTGTATATCATGTNGTTTTAGGCTGAAAGCTGAAATACAGATATA
GCTGACCAGGAACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTGC
AAAACAAATACAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTAC
ACTCACCCAAAATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCAC
GGTGAGAAGTTGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAA
ATACGCGTTAACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGA
TAAATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAAAAAATC
GCACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAG
CGTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAATGTGAAAGGATTTTTT
TGCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCG
TTTCAACAAGTGATATTATTTATTATTGTACCATGAGCAAGTTGTTCGGG
ATTCAATGTAAGATGATTCTTTTGCAAAACATCAATCACTTCTCATGTCA
TACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAA
AATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATT
TTTATTGGCAATTCAGTGGTTTCGAAGTTGATGATTCTAATTATTGTGTA
AAACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGG
TCTTTGGTTTATGAACATTATCCCACCAAATGCTGAGTTTAGAATAAAGT
GATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTT
TCCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTT
CATCTACACTGTATTTCACTGTATATCATGTCACTTATTATTAAGTAGTA
TGTTTGAACGTTAATTAGTACAAATAACCTAAAGTTTAGGCAACACTTTG
TTTCTAAACAATTCACTTTATTTTAGAAGGTGATTTCAACGGCCAACGGC
GACAAAGGTATGAGTCATTCCTAATACAAACTTTATACTATGCTGCTTTC
TATGACGGAAGGGTTTTTGCGGTGATGAATATTTTGTTCTTAAAACAAAC
AATAATGACACCCTTCATTTCATTTTTACAGAGTCAGTTCATGTGCGCAT
AAAGCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACACCTTCGAC
AGCCTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTTATCTGAGA
CAACCACAAACCAACCCTTATCTTAGACAACCTCGACCTGATCCACGATA
TGCACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGAGTC
CTAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTATCAG
CCTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCAAA
CCAGCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAGACCTGGAC
CATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCACCA
ACAAGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCTGGCAGGAG
AATCAACGTAAGTTTAACAACAAAGTCTTCTTATTCACCATTCAAAACGT
GACCGAGATGAGCACGTAATTCCCTTTCCACCTTCTTTCATTACAGATGT
TCCAGTCCCTGCCTTACGGTCACGAGACACGCTTCACTTTCACTTTACGA
CCGAACGAGCCGCGAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCA
AGCATATGATATGACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGA
GCCTTGAAACATATCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATT
ACTTCACGTAAGAAGGCTCTCTCAGTGGAAACAATTCAATATCTATTTAA
CAAGTAATTTGAAAAATATTTAGTGTACAGCAATTCTTCTCAAATATCTA
ATTTTAACTTTAATTCCTTGCAGCCAACTTACGAGCAGAGCCAGTGAAGC
GCGATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAA
TCAATGCTGGACCACCATGGTGAACAGAAAGTCATGAATTACACCATCAT
GCTCATGAATTCGGTACGTTAGAGTGCAAAACCTTCTTCAAAGTATAATG
AAAATCTTAAGAAGGTGATTGTTACCATTTTTCATCTTCATCTACAGGTG
ACGCGGACGTTTTTGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGT
TGTCAACATTCACCTTATGAAGAACAAACCGGTCAGTACAACATATATTG
TCTCAACACCACACACAGTACCAGACCCCTTCATTCACATTGTATTCTTC
CCTTTCACATTTTCAGTCGTATTACCGTATCGTGACCAATCGTCCGGAAA
TCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAAC
AACTCGGTGGATTTTCATCTCATCTTGACAAGGTATACATATTGCAGCAT
TTTCTCTAACCATTCATTATTTTACATCCCTACATCAATTTCTAATAATT
GATCAAGGTATTTTCCTAAGATTTTCCAAACCTTCTCTTCAATGGCAGAT
TTATATAAAAAGTTGTTTATTCCTTTTCCAAGCTCTATCTCTTGAACTGG
AGCAAGAATCATCATTTTTAAAAGAGATTTATTTTATTTTCAGGGAGGAT
ATTGGACCAGCAGGTAAGTTGATTTCTTGAAAAAATTCTCCACCAGTGAT
TTGCTTATATAGATTTTGTACTGCTCAAAAACCTTCTTCACTCAATTTTA
TCTTTCCAACACACACAGGGTTTGCAGCTATGTATACAATGTGTAGTCGC
AGAAGTTGTGCATTAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCAT
CACTCATGAACTTGCACACGCGTAAGTTATACAACAGAGATAGGAGATCT
TTATTTATTAGCTGTTACCCGTTATATTTTCTAACGTTGACCATGTCTAC
AACACTGTGTTTTCACACCTTGGTAAAGTTTAAGCAACCGACACTAAGGT
TTGCTGGCTGTTACTTATGATAATAGTTTCCCGATTACCCGATTACCGTA
ATCCGTTTTTGTGATTCAGTTTGGGTATCGATCATGACGAGGACGATGGT
TGTGGAAGAGAGAATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTA
TGCTACCTCTTCCAATTTTCGATGGTCCAAATGTAGTGCGAAAATGATTT
GGCAAAATTTGAAGTAAGCAAATGTGTCAAAAGAGAACTAATTTTATTGA
TGAATATTGCTTTGAAAGAGGTAAATAGAATAAATACCGTAGATAACTAG
ATAAATAGCAATTTCTTTTTCCATTGTTTAGATACTTCACGTGTTTAAAG
AACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACC
AGGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCT
CCGCTCTTCCTTGCACACCCAGGGTTTGTTCCATCATTTTTGTTTTTCAT
GTATTCTATAACAGATATACTCTACTAGAATCGTAAGTTGACATAATTCG
ATGTGAACTCATCATCGAAGGACGATTTGTAGTGTACTCTTTCACAATTT
CAGAATCCATTGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAG
TGCACCTTGTCAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGT
GTGCCAAATCAAAGGTGAGATTTCTTTTGGAGTTTATGTGTCTTATTTAA
AGCTTACAGACAAAGAGGTAATTAATCATAAAGTTTCTCATAAAAACATG
AATTTATCGAACAATTTGTGGCTAATTTGGCTAACCATCATCTCTTTTTG
GACAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCA
GTTAACGGTGGGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCG
AAAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATC
CCAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAG
CCTTGACAGTATATTCACAACTGACTATCATACTTTATTCTGATTCTCTT
TAACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAAT
ATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATG
CGACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGAT
GGAAGAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGC
TCTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGT
TATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCA
ACGTAGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGT
CAATGTAAAACAACAATCTCCTTAAGAAAATGAAAGTGAACAGGCCTTTG
GTGCATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTAAATTTAAC
GTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCG
TCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGT
CCTTCCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTT
TGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTG
TCATTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTC
GCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCG
AAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTG
ATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAG
GTTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCCATC
AAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGT
CGATCAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGG
ACTTACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCACGATCG
AAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGATGATATT
CAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTC
GAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAG
ATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAA
AACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGAT
AAACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGT
TCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAA
ATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATC
AAACCAGTTAACGGTGGGTGGTCCAAGTATTCGGAATTCACACCACCCTG
CAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCA
CCAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAA
ACCCAGCCTTGACAGTATATTCACAACTGACTATCATACTTTATTCTGAT
TCTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCA
ATCAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTC
AACATGCGACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCAC
CATGATGGAAGAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGA
TTCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGG
TGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAG
CGAGCAACGTAGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGG
ATTCGTCAATGTAAAACATCAATCCCCTTAAGAAAATGAAAGTGAACAGG
CCTTTGGTGCATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTGAA
TTTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGA
AGGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGA
ACAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCT
TTACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGT
CACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATG
AAATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACA
CATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATC
AAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAG
TATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCAT
TCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAG
TTATGTCGATCAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAA
AGAAGGACTTACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCA
CGATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGAT
GATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAG
GTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAA
CGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTT
TTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCA
GACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAA
GATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAAT
CGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTT
ATTNGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTA
AGAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCT
ATCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTT
AAGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTAT
TCTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAATACTTGCTCCTTTC
TTGATGATGAAAAGAAGGAATTACCGACCATGACCAATATATCTCAATAT
GTTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGG
AGATATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAA
AGTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAA
GTATTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCT
TAAATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTT
CTTCTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTA
CCCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCC
TGTAAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCA
GGTAAATAAACATTTTATTGCAAATGATCCAGATAAAGGTATTGAACCGC
ATTGAATATCTTTAATCTTTATTCTCATTCACCAAAGAATGAGAGATAAT
GACAATTTATCATTCTTAATTTTTCAGCCCGTTAACTGTCATGGTGTTAT
AAATGGCCGAAAATGCTGACGTTACAAAAATGATTTTTGAGAAAATTTAA
TGTATTTAATCAGTTTTATTTGTAAAACTTATATTTTTATGAAAGAGAAT
AGAAAAAGTTTAGACCTGAATAGAACGCTGGAAATATAAATAATATACTG
TACATCATTGACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049459-exon-scaffold_159-1575043694:144806..144928TCONS_00049459-exon-scaffold_159-1575043694:144806..144928Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:143337..143497TCONS_00049459-exon-scaffold_159-1575043694:143337..143497Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:143172..143202TCONS_00049459-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:142572..143047TCONS_00049459-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:142272..142482TCONS_00049459-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:142016..142155TCONS_00049459-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:141848..141931TCONS_00049459-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:141647..141762TCONS_00049459-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:141416..141435TCONS_00049459-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:141208..141310TCONS_00049459-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:140866..141009TCONS_00049459-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:140606..140747TCONS_00049459-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:140365..140475TCONS_00049459-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:140075..140223TCONS_00049459-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:139870..139972TCONS_00049459-exon-scaffold_159-1575043694:139870..139972Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:137562..137673TCONS_00049459-exon-scaffold_159-1575043694:137562..137673Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:137023..137441TCONS_00049459-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:136017..136116TCONS_00049459-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:135728..135861TCONS_00049459-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1575043694:135402..135601TCONS_00049459-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:144806..144928TCONS_00049459-exon-scaffold_159-1510915933:144806..144928Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:143337..143497TCONS_00049459-exon-scaffold_159-1510915933:143337..143497Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:143172..143202TCONS_00049459-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:142572..143047TCONS_00049459-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:142272..142482TCONS_00049459-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:142016..142155TCONS_00049459-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:141848..141931TCONS_00049459-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:141647..141762TCONS_00049459-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:141416..141435TCONS_00049459-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:141208..141310TCONS_00049459-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:140866..141009TCONS_00049459-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:140606..140747TCONS_00049459-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:140365..140475TCONS_00049459-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:140075..140223TCONS_00049459-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:139870..139972TCONS_00049459-exon-scaffold_159-1510915933:139870..139972Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:137562..137673TCONS_00049459-exon-scaffold_159-1510915933:137562..137673Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:137023..137441TCONS_00049459-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:136017..136116TCONS_00049459-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:135728..135861TCONS_00049459-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1510915933:135402..135601TCONS_00049459-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:144806..144928TCONS_00049459-exon-scaffold_159-1491911889:144806..144928Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:143337..143497TCONS_00049459-exon-scaffold_159-1491911889:143337..143497Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:143172..143202TCONS_00049459-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:142572..143047TCONS_00049459-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:142272..142482TCONS_00049459-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:142016..142155TCONS_00049459-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:141848..141931TCONS_00049459-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:141647..141762TCONS_00049459-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:141416..141435TCONS_00049459-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:141208..141310TCONS_00049459-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:140866..141009TCONS_00049459-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:140606..140747TCONS_00049459-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:140365..140475TCONS_00049459-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:140075..140223TCONS_00049459-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:139870..139972TCONS_00049459-exon-scaffold_159-1491911889:139870..139972Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:137562..137673TCONS_00049459-exon-scaffold_159-1491911889:137562..137673Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:137023..137441TCONS_00049459-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:136017..136116TCONS_00049459-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:135728..135861TCONS_00049459-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049459-exon-scaffold_159-1491911889:135402..135601TCONS_00049459-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..144928 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.379216	0	3.50024e-09	0.91883	7.55655e-08	2.0966	0.656715	6.77136e-07	1.59507	0.00106915	0.0147259	0.580328	4.43737e-07	0.739992	1.96288	0.25659	1.02623	0.536215	1.30207e-07	1.2021e-07	2.13701e-06	3.21708	5.49382e-08	7.72996e-07	1.6893e-07	2.83724e-06
Blast
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BLAST of TCONS_00049459 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.159e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 3 
Query: 1095 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 2063
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049459 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS142.159e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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