TCONS_00049462 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049462
Unique NameTCONS_00049462
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049462 ID=TCONS_00049462|Name=TCONS_00049462|organism=Clytia hemisphaerica|type=transcript|length=3178bp
AAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAAATACGCGTTAACA
AAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGATAAATATTGACAA
TCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCACAGAGAGAGC
TTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGGAGG
AgcagagagaaaaaaagaaaagACATTAAAAGAATATTTGGTCTTTGGTT
TATGAACATTATCCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTT
ATTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTTTCCACACCC
TTGCTGCTTATACTTTTTACACATCTTTGTGGTAAGGTGATTTCAACGGC
CAACGGCGACAAAGAGTCAGTTCATGTGCGCATAAAGCGGCAACAAGCGC
CACAAAACTACCAACTTCCACCACACCTTCGACAGCCTCAACCAAACAAT
AGACAACATTTCAGACTTCCAGCTTATCTGAGACAACCACAAACCAACCC
TTATCTTAGACAACCTCGACCTGATCCACGATATGCACCCAACCGACCAA
GACCAAATCCACGTTTTCCCAATCCGCCGAGTCCTAATACTCGCTTCCCT
CAAAATCAGCCTCGACCTGACCCAAGGTATCAGCCTCGCCCTGACCCAAG
GTACCAGCCTCGTCCTAATCCTCGTTATCCAAACCAGCCACGCCCTACTT
CGAATAGGGGTCAACCACCACGTAGACCTGGACCATTTCGTCCGCCTCCT
TTAAGAGATTTGCATGGTTACCAACAATCACCAACAAGACCTGGAGAAAT
CTCCATCAATTTCATCAACAAATCTGGCAGGAGAATCAACATGTTCCAGT
CCCTGCCTTACGGTCACGAGACACGCTTCACTTTCACTTTACGACCGAAC
GAGCCGCGAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAAGCATA
TGATATGACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAGCCTTG
AAACATATCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTACTTCA
CCCAACTTACGAGCAGAGCCAGTGAAGCGCGATCGAAGTGTTCCACGCTT
TATCGAAACACAGGTGGTGGTGGACAAATCAATGCTGGACCACCATGGTG
AACAGAAAGTCATGAATTACACCATCATGCTCATGAATTCGGTGACGCGG
ACGTTTTTGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTTGTCAA
CATTCACCTTATGAAGAACAAACCGTCGTATTACCGTATCGTGACCAATC
GTCCGGAAATCAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCT
CAACGTAACAACTCGGTGGATTTTCATCTCATCTTGACAAGggaGGATAT
TGGACCAGCAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCAGAAGTT
GTGCATTAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATCACTCAT
GAACTTGCACACGCTTTGGGTATCGATCATGACGAGGACGATGGTTGTGG
AAGAGAGAATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTATGCTA
CCTCTTCCAATTTTCGATGGTCCAAATGTAGTGCGAAAAtgatttggcaa
aatttgaaATACTTCACGTGTTTAAAGAACAAACCAAAAATGCTTCCCAC
ATTCAAAAAAAGCATGGATTGGCTACCAGGGGAGCTGATGGGAATTAAAG
ATCAATGTCGAAGCTATCATGGTTCCTCCGCTCTTCCTTGCACACCCAGG
AATCCATTGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGTGC
ACCTTGTCAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTGTG
CCAAATCAAAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATC
AAACCAGTTAACGGTGGGTGGTCCAAATATTCGGAATTCACACCACCCTG
CAACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCA
CCAATCCCAAGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAAT
CAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAA
CATGCGACAATTGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGAC
AGAACGGGTGCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTAT
CGAGAAAGCGAGCAACGTAGACAAGTAAAGTCGTTGAATTTAACGTGCGA
TTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGTCAAAG
GGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTCCTTCC
GTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTTGAGGC
GTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGTCATTT
TGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCGCTTAT
CACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGAAGGGG
CAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGATAAGT
GGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGATCACG
ATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTgatga
tattcaattttcttacGGGCTGTGTAATGCAAAGTCAAGTCAAGACGATA
AACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTT
CGAAGGAGACTTCCTGATGGCTATCCCTGTAAATtaccaaaatcgaaaaa
taatgTTTGCTTTAGACAAGTTTGTCAGcccGTTAACTGTCATGGTGTTA
TAAATGGCCGAAAATGCTGACgttacaaaaatgatttttgagaaaattta
atgTATTTAATCagttttatttgtaaaacttatatttttatgaaagaGAA
TAGAAAAAGTTTAGACCTGAATAGAACGCTGGAAATATAAATAATATACT
GTACATCATTGACCACAAAATGATCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_159:135402..145027-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049462 ID=TCONS_00049462|Name=TCONS_00049462|organism=Clytia hemisphaerica|type=transcript|length=9626bp|location=Sequence derived from alignment at scaffold_159:135402..145027- (Clytia hemisphaerica)
AAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAAATACGCGTTAACA
AAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGATAAATATTGACAA
TCACTTCAAACAAAGAATTTCACACTCACAAAAAATCGCACAGAGAGAGC
TTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGCGTGGTTTGGAGG
AGCAGAGAGAAAAAAAGAAAAGGTGAAAGGATTTTTTTGCGAAGGGTTTG
AGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCGTTTCAACAAGTGA
TATTATTTATTATTGTACCATGAGCAAGTTGTTCGGGATTCAATGTAAGA
TGACTCTTTTGCAAAACATCAATCACTTCTCATGTCATACTACACTGTGT
ACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAAAATTGATGTGTTG
TTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATTTTTATTGGCAATT
CAGTGGTTTCGAAGTTAATGATTCTAATTATTGTGTAACACTTTCAACCT
TGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGGTCTTTGGTTTATG
AACATTATTCCACCAAATGCTGAGTTTAGAATAAAGTGATCGTGTTATTT
GGATAGGAGTGGTGTATCTTTTTTTGGAGGATGTTTTCCACACCCTTGCT
GCTTATACTTTTTACACATCTTTGTGGTGTAAGTTTCATCTACACTGTAT
TTCACTGTATATCATGTNGTTTTAGGCTGAAAGCTGAAATACAGATATAG
CTGACCAGGAACAGACCCAATGGTATGCAGTACTCATTTTGTCTTGTGCA
AAACAAATACAAACAGAAGAAGATAATCTCCAAGTCTCCGAATGTTTACA
CTCACCCAAAATAAAGCTCAAAGAAATTATTGTACTTGATTGATATCACG
GTGAGAAGTTGGAAAAGCCATGCTAAAAGACACGAAAATGGTGATGGAAA
TACGCGTTAACAAAGATAAGTAACGCTTAATAAACGCTGGCTGATTTGAT
AAATATTGACAATCACTTCAAACAAAGAATTTCACACTCACAAAAAATCG
CACAGAGAGAGCTTGGTTGGTTCAGGAACAGTTCCTTATTGACTTTCAGC
GTGGTTTGGAGGAGCAGAGAGAAAAAAAGAAAATGTGAAAGGATTTTTTT
GCGAAGGGTTTGAGTCATGATAATAAAACGCGTTTGTTGAGTATTTTCGT
TTCAACAAGTGATATTATTTATTATTGTACCATGAGCAAGTTGTTCGGGA
TTCAATGTAAGATGATTCTTTTGCAAAACATCAATCACTTCTCATGTCAT
ACTACACTGTGTACTACAAAAAAGAAAGCAAGAAAAAAAAGTTTTGAAAA
ATTGATGTGTTGTTGAATTGAAAAAGCTGGAAGTTTGAAACTCGAGATTT
TTATTGGCAATTCAGTGGTTTCGAAGTTGATGATTCTAATTATTGTGTAA
AACTTTCAACCTTGTTCCTTTCTTTCTTAGACATTAAAAGAATATTTGGT
CTTTGGTTTATGAACATTATCCCACCAAATGCTGAGTTTAGAATAAAGTG
ATCGTGTTATTTGGATAGGAGTGGTGTATCTTTTTTTGGGAGGATGTTTT
CCACACCCTTGCTGCTTATACTTTTTACACATCTTTGTGGTGTAAGTTTC
ATCTACACTGTATTTCACTGTATATCATGTCACTTATTATTAAGTAGTAT
GTTTGAACGTTAATTAGTACAAATAACCTAAAGTTTAGGCAACACTTTGT
TTCTAAACAATTCACTTTATTTTAGAAGGTGATTTCAACGGCCAACGGCG
ACAAAGGTATGAGTCATTCCTAATACAAACTTTATACTATGCTGCTTTCT
ATGACGGAAGGGTTTTTGCGGTGATGAATATTTTGTTCTTAAAACAAACA
ATAATGACACCCTTCATTTCATTTTTACAGAGTCAGTTCATGTGCGCATA
AAGCGGCAACAAGCGCCACAAAACTACCAACTTCCACCACACCTTCGACA
GCCTCAACCAAACAATAGACAACATTTCAGACTTCCAGCTTATCTGAGAC
AACCACAAACCAACCCTTATCTTAGACAACCTCGACCTGATCCACGATAT
GCACCCAACCGACCAAGACCAAATCCACGTTTTCCCAATCCGCCGAGTCC
TAATACTCGCTTCCCTCAAAATCAGCCTCGACCTGACCCAAGGTATCAGC
CTCGCCCTGACCCAAGGTACCAGCCTCGTCCTAATCCTCGTTATCCAAAC
CAGCCACGCCCTACTTCGAATAGGGGTCAACCACCACGTAGACCTGGACC
ATTTCGTCCGCCTCCTTTAAGAGATTTGCATGGTTACCAACAATCACCAA
CAAGACCTGGAGAAATCTCCATCAATTTCATCAACAAATCTGGCAGGAGA
ATCAACGTAAGTTTAACAACAAAGTCTTCTTATTCACCATTCAAAACGTG
ACCGAGATGAGCACGTAATTCCCTTTCCACCTTCTTTCATTACAGATGTT
CCAGTCCCTGCCTTACGGTCACGAGACACGCTTCACTTTCACTTTACGAC
CGAACGAGCCGCGAAGGGTGAGCGTACAACCAGATAATTCTTTCTGGCAA
GCATATGATATGACGACAAGCTTTCCTCTCTACATCAATGGTCAGCCGAG
CCTTGAAACATATCTTCTTCGACAAGGAACGAGTGTAGATGCACGAATTA
CTTCACGTAAGAAGGCTCTCTCAGTGGAAACAATTCAATATCTATTTAAC
AAGTAATTTGAAAAATATTTAGTGTACAGCAATTCTTCTCAAATATCTAA
TTTTAACTTTAATTCCTTGCAGCCAACTTACGAGCAGAGCCAGTGAAGCG
CGATCGAAGTGTTCCACGCTTTATCGAAACACAGGTGGTGGTGGACAAAT
CAATGCTGGACCACCATGGTGAACAGAAAGTCATGAATTACACCATCATG
CTCATGAATTCGGTACGTTAGAGTGCAAAACCTTCTTCAAAGTATAATGA
AAATCTTAAGAAGGTGATTGTTACCATTTTTCATCTTCATCTACAGGTGA
CGCGGACGTTTTTGCATCGATCGTTCGGAGCGCCCATCTACGTTTCTGTT
GTCAACATTCACCTTATGAAGAACAAACCGGTCAGTACAACATATATTGT
CTCAACACCACACACAGTACCAGACCCCTTCATTCACATTGTATTCTTCC
CTTTCACATTTTCAGTCGTATTACCGTATCGTGACCAATCGTCCGGAAAT
CAGCGTTCCCGGAGCATGTCGGTATTCAAGAGAAGTTGCTCAACGTAACA
ACTCGGTGGATTTTCATCTCATCTTGACAAGGTATACATATTGCAGCATT
TTCTCTAACCATTCATTATTTTACATCCCTACATCAATTTCTAATAATTG
ATCAAGGTATTTTCCTAAGATTTTCCAAACCTTCTCTTCAATGGCAGATT
TATATAAAAAGTTGTTTATTCCTTTTCCAAGCTCTATCTCTTGAACTGGA
GCAAGAATCATCATTTTTAAAAGAGATTTATTTTATTTTCAGGGAGGATA
TTGGACCAGCAGGTAAGTTGATTTCTTGAAAAAATTCTCCACCAGTGATT
TGCTTATATAGATTTTGTACTGCTCAAAAACCTTCTTCACTCAATTTTAT
CTTTCCAACACACACAGGGTTTGCAGCTATGTATACAATGTGTAGTCGCA
GAAGTTGTGCATTAGTCAAGGAGAACGGACCCGACACTTCTTTCGTCATC
ACTCATGAACTTGCACACGCGTAAGTTATACAACAGAGATAGGAGATCTT
TATTTATTAGCTGTTACCCGTTATATTTTCTAACGTTGACCATGTCTACA
ACACTGTGTTTTCACACCTTGGTAAAGTTTAAGCAACCGACACTAAGGTT
TGCTGGCTGTTACTTATGATAATAGTTTCCCGATTACCCGATTACCGTAA
TCCGTTTTTGTGATTCAGTTTGGGTATCGATCATGACGAGGACGATGGTT
GTGGAAGAGAGAATTTGTCCGGTGGAAATATTATGGTCAAAAAGTTGTAT
GCTACCTCTTCCAATTTTCGATGGTCCAAATGTAGTGCGAAAATGATTTG
GCAAAATTTGAAGTAAGCAAATGTGTCAAAAGAGAACTAATTTTATTGAT
GAATATTGCTTTGAAAGAGGTAAATAGAATAAATACCGTAGATAACTAGA
TAAATAGCAATTTCTTTTTCCATTGTTTAGATACTTCACGTGTTTAAAGA
ACAAACCAAAAATGCTTCCCACATTCAAAAAAAGCATGGATTGGCTACCA
GGGGAGCTGATGGGAATTAAAGATCAATGTCGAAGCTATCATGGTTCCTC
CGCTCTTCCTTGCACACCCAGGGTTTGTTCCATCATTTTTGTTTTTCATG
TATTCTATAACAGATATACTCTACTAGAATCGTAAGTTGACATAATTCGA
TGTGAACTCATCATCGAAGGACGATTTGTAGTGTACTCTTTCACAATTTC
AGAATCCATTGACGGCGTGCAGATATTTATGGTGTCGACCCAATCAGAGT
GCACCTTGTCAACCTGTATGGTGGCATGCTCCTTTGGAAGGCTCAACGTG
TGCCAAATCAAAGGTGAGATTTCTTTTGGAGTTTATGTGTCTTATTTAAA
GCTTACAGACAAAGAGGTAATTAATCATAAAGTTTCTCATAAAAACATGA
ATTTATCGAACAATTTGTGGCTAATTTGGCTAACCATCATCTCTTTTTGG
ACAGTGGTGCAAAAGAGGGCGTTGTGTGACCAAGATGAAGATCAAACCAG
TTAACGGTGGGTGGTCCAAATATTCGGAATTCACACCACCCTGCAACCGA
AAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCACCAATCC
CAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAACCCAGC
CTTGACAGTATATTCACAACTGACTATCATACTTTATTCTGATTCTCTTT
AACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAATCAATA
TCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCAACATGC
GACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACCATGATG
GAAGAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGATTCAGCT
CTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGTGCAGTT
ATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGCGAAAGCGAGCAA
CGTAGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGATTCGTC
AATGTAAAACAACAATCTCCTTAAGAAAATGAAAGTGAACAGGCCTTTGG
TGCATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTAAATTTAACG
TGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAAGGGCGT
CAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAACAGGTC
CTTCCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTTTACTTT
GAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTCACGTGT
CATTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGAAATTCG
CTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACACATTCGA
AGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCAAGGTGA
TAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGTATAAGG
TTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATTCCATCA
AAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGTTATGTC
GATCAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAAGAAGGA
CTTACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCACGATCGA
AGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGATGATATTC
AATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGGTATTCG
AAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAACGTCAGA
TAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTTTGAAAA
ACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAGACGATA
AACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAGATGGTT
CGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATCGAAAAA
TAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTATTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATCA
AACCAGTTAACGGTGGGTGGTCCAAGTATTCGGAATTCACACCACCCTGC
AACCGAAAGTCCACCAGATGGATTGTTCAACATCGAAACAGAAGTTGCAC
CAATCCCAAGTAAGACCCAAAATAAATCTCTTCGAAGCTTCCATTCCAAA
CCCAGCCTTGACAGTATATTCACAACTGACTATCATACTTTATTCTGATT
CTCTTTAACAGGCCGAGGTTATCAGGGAAGAAATGTCAAGGTAGTCCCAA
TCAATATCGTATTTTGATCCCAGGAAGGAATGGGATTTGCAAGCCTTTCA
ACATGCGACAATTGGTAAGCAATCTTCAACAAGAGAAAGTAGAAGGCACC
ATGATGGAAGAAACAAACTATTCTTCTCATCACCTTTTTATTCTTCTGAT
TCAGCTCTTAAGCGGAGAAATCGATTGGGAAAACATACGACAGAACGGGT
GCAGTTATAAGAATGATAACGTCACTAAATGGAGAGTTTATCGAGAAAGC
GAGCAACGTAGACAAGGTAAGATCATTATGTTTTACGTTCTTTCATTGGA
TTCGTCAATGTAAAACATCAATCCCCTTAAGAAAATGAAAGTGAACAGGC
CTTTGGTGCATCTCATCTATAATTTTTATTTTGCAGTAAAGTCGTTGAAT
TTAACGTGCGATTTTGAAAGCCCTGGATGCGGATGGAAGAATTCAAAGAA
GGGCGTCAAAGGGTGGAATATTGGCAAAGGAGCAACGCCCTCACACCGAA
CAGGTCCTTCCGTTGATAACACCATCAAGACCAAGACAGGGAAATATCTT
TACTTTGAGGCGTCATGGGTGTCAGGTACCACCCCTCTGAGGAGAGGGTC
ACGTGTCATTTTGGAATCACCTATCATCTTCTCATCACAAGTGTGTATGA
AATTCGCTTATCACATGTATGGAAAGGGTGTTGGCTCGTTAGAAATACAC
ATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAAGAAAGGCGATCA
AGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTATCAACATCGAGT
ATAAGGTTGGTCACCAAACAATATAATAACTCACTTTAAGTCCATTCATT
CCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATTCTGTTTCTCAGT
TATGTCGATCAGGATGGTCAGAACACTTGCTCCTTTCTTGATGATGAAAA
GAAGGACTTACCGACCATGACCAATATATCTCTGTTTCTTATTAGATCAC
GATCGAAGCAGTGCGTGGTAATTCATATTACGGAGATATAGCAATTGATG
ATATTCAATTTTCTTACGGGCTGTGTAATGCAAAGTCAAGTCAAGGTAGG
TATTCGAAGGGAAAAGTGGGTTTCTACGATGAAGTATTTTCTCAAACAAC
GTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTTAAATGGTCTCCATTTT
TGAAAAACCTTACCTGTCAGTGAACTTCCTTTTCTTCTTTTCTTTCTCAG
ACGATAAACAGATCTGTACTAACGTGTGTATTACCCAAGATAATTCAAAG
ATGGTTCGAAGGAGACTTCCTGATGGCTATCCCTGTAAATTACCAAAATC
GAAAAATAATGTTTGCTTTAGACAAGTTTGTCAGGTAAATAAACATTTTA
TTNGAAATACACATTCGAAGGGGCAAGCATTCACGCAAAATGTGGAGTAA
GAAAGGCGATCAAGGTGATAAGTGGTATCAAGCTGAAGTTGAACTGGCTA
TCAACATCGAGTATAAGGTTGGTCACCAAACAATATAATAACTCACTTTA
AGTCCATTCATTCCATCAAAGGGTTGACTGTTGGGATTGTTACCATTATT
CTGTTTCTCAGTTATGTCGATCAGGATGGTCAGAATACTTGCTCCTTTCT
TGATGATGAAAAGAAGGAATTACCGACCATGACCAATATATCTCAATATG
TTTCTTATTAGATCACGATCGAAGCAGTGCGTGGTAATTCATATTACGGA
GATATAGCAATTGATGATATTCAATTTTCTTACGGGCTGTGTAATGCAAA
GTCAAGTCAAGGTAGGTATTCGAAGGGAAAAGTGGGTTTCTACGATGAAG
TATTTTCTCAAACAACGTCAGATAAAATAAGTCAAGAGCCTCTAGAGCTT
AAATGGTCTCCATTTTTGAAAAACCTTACCTGTCAGTGAACTTCCTTTTC
TTCTTTTCTTTCTCAGACGATAAACAGATCTGTACTAACGTGTGTATTAC
CCAAGATAATTCAAAGATGGTTCGAAGGAGACTTCCTGATGGCTATCCCT
GTAAATTACCAAAATCGAAAAATAATGTTTGCTTTAGACAAGTTTGTCAG
GTAAATAAACATTTTATTGCAAATGATCCAGATAAAGGTATTGAACCGCA
TTGAATATCTTTAATCTTTATTCTCATTCACCAAAGAATGAGAGATAATG
ACAATTTATCATTCTTAATTTTTCAGCCCGTTAACTGTCATGGTGTTATA
AATGGCCGAAAATGCTGACGTTACAAAAATGATTTTTGAGAAAATTTAAT
GTATTTAATCAGTTTTATTTGTAAAACTTATATTTTTATGAAAGAGAATA
GAAAAAGTTTAGACCTGAATAGAACGCTGGAAATATAAATAATATACTGT
ACATCATTGACCACAAAATGATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031382XLOC_031382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049462-exon-scaffold_159-1575043694:144806..145027TCONS_00049462-exon-scaffold_159-1575043694:144806..145027Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:144425..144459TCONS_00049462-exon-scaffold_159-1575043694:144425..144459Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:143337..143462TCONS_00049462-exon-scaffold_159-1575043694:143337..143462Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:143172..143202TCONS_00049462-exon-scaffold_159-1575043694:143172..143202Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:142572..143047TCONS_00049462-exon-scaffold_159-1575043694:142572..143047Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:142272..142482TCONS_00049462-exon-scaffold_159-1575043694:142272..142482Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:142016..142155TCONS_00049462-exon-scaffold_159-1575043694:142016..142155Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:141848..141931TCONS_00049462-exon-scaffold_159-1575043694:141848..141931Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:141647..141762TCONS_00049462-exon-scaffold_159-1575043694:141647..141762Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:141416..141435TCONS_00049462-exon-scaffold_159-1575043694:141416..141435Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:141208..141310TCONS_00049462-exon-scaffold_159-1575043694:141208..141310Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:140866..141009TCONS_00049462-exon-scaffold_159-1575043694:140866..141009Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:140606..140747TCONS_00049462-exon-scaffold_159-1575043694:140606..140747Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:140365..140475TCONS_00049462-exon-scaffold_159-1575043694:140365..140475Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:140075..140223TCONS_00049462-exon-scaffold_159-1575043694:140075..140223Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:137764..137866TCONS_00049462-exon-scaffold_159-1575043694:137764..137866Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:137562..137673TCONS_00049462-exon-scaffold_159-1575043694:137562..137673Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:137023..137441TCONS_00049462-exon-scaffold_159-1575043694:137023..137441Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:136017..136116TCONS_00049462-exon-scaffold_159-1575043694:136017..136116Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:135728..135861TCONS_00049462-exon-scaffold_159-1575043694:135728..135861Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1575043694:135402..135601TCONS_00049462-exon-scaffold_159-1575043694:135402..135601Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:144806..145027TCONS_00049462-exon-scaffold_159-1510915933:144806..145027Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:144425..144459TCONS_00049462-exon-scaffold_159-1510915933:144425..144459Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:143337..143462TCONS_00049462-exon-scaffold_159-1510915933:143337..143462Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:143172..143202TCONS_00049462-exon-scaffold_159-1510915933:143172..143202Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:142572..143047TCONS_00049462-exon-scaffold_159-1510915933:142572..143047Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:142272..142482TCONS_00049462-exon-scaffold_159-1510915933:142272..142482Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:142016..142155TCONS_00049462-exon-scaffold_159-1510915933:142016..142155Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:141848..141931TCONS_00049462-exon-scaffold_159-1510915933:141848..141931Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:141647..141762TCONS_00049462-exon-scaffold_159-1510915933:141647..141762Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:141416..141435TCONS_00049462-exon-scaffold_159-1510915933:141416..141435Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:141208..141310TCONS_00049462-exon-scaffold_159-1510915933:141208..141310Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:140866..141009TCONS_00049462-exon-scaffold_159-1510915933:140866..141009Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:140606..140747TCONS_00049462-exon-scaffold_159-1510915933:140606..140747Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:140365..140475TCONS_00049462-exon-scaffold_159-1510915933:140365..140475Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:140075..140223TCONS_00049462-exon-scaffold_159-1510915933:140075..140223Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:137764..137866TCONS_00049462-exon-scaffold_159-1510915933:137764..137866Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:137562..137673TCONS_00049462-exon-scaffold_159-1510915933:137562..137673Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:137023..137441TCONS_00049462-exon-scaffold_159-1510915933:137023..137441Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:136017..136116TCONS_00049462-exon-scaffold_159-1510915933:136017..136116Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:135728..135861TCONS_00049462-exon-scaffold_159-1510915933:135728..135861Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1510915933:135402..135601TCONS_00049462-exon-scaffold_159-1510915933:135402..135601Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:144806..145027TCONS_00049462-exon-scaffold_159-1491911889:144806..145027Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:144425..144459TCONS_00049462-exon-scaffold_159-1491911889:144425..144459Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:143337..143462TCONS_00049462-exon-scaffold_159-1491911889:143337..143462Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:143172..143202TCONS_00049462-exon-scaffold_159-1491911889:143172..143202Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:142572..143047TCONS_00049462-exon-scaffold_159-1491911889:142572..143047Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:142272..142482TCONS_00049462-exon-scaffold_159-1491911889:142272..142482Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:142016..142155TCONS_00049462-exon-scaffold_159-1491911889:142016..142155Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:141848..141931TCONS_00049462-exon-scaffold_159-1491911889:141848..141931Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:141647..141762TCONS_00049462-exon-scaffold_159-1491911889:141647..141762Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:141416..141435TCONS_00049462-exon-scaffold_159-1491911889:141416..141435Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:141208..141310TCONS_00049462-exon-scaffold_159-1491911889:141208..141310Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:140866..141009TCONS_00049462-exon-scaffold_159-1491911889:140866..141009Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:140606..140747TCONS_00049462-exon-scaffold_159-1491911889:140606..140747Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:140365..140475TCONS_00049462-exon-scaffold_159-1491911889:140365..140475Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:140075..140223TCONS_00049462-exon-scaffold_159-1491911889:140075..140223Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:137764..137866TCONS_00049462-exon-scaffold_159-1491911889:137764..137866Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:137562..137673TCONS_00049462-exon-scaffold_159-1491911889:137562..137673Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:137023..137441TCONS_00049462-exon-scaffold_159-1491911889:137023..137441Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:136017..136116TCONS_00049462-exon-scaffold_159-1491911889:136017..136116Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:135728..135861TCONS_00049462-exon-scaffold_159-1491911889:135728..135861Clytia hemisphaericaexon
TCONS_00049462-exon-scaffold_159-1491911889:135402..135601TCONS_00049462-exon-scaffold_159-1491911889:135402..135601Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_159supercontigscaffold_159:135402..145027 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.128625	0	0	0	0	0	0	4.94769e-09	0	0	0	1.44282e-08	0.0332607	0.000186237	0.769122	0	0	0.134866	3.57947e-06	1.36843	0	1.24394	0	0.255499	0	9.05503e-10	0	0	0.00789226	0
Blast
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BLAST of TCONS_00049462 vs. Swiss-Prot (Human)
Match: ATS14 (A disintegrin and metalloproteinase with thrombospondin motifs 14 OS=Homo sapiens GN=ADAMTS14 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.389e-43
Identity = 112/335 (33.43%), Postives = 172/335 (51.34%), Query Frame = 3 
Query: 1194 HGEQKVMNYTIMLMNSVTRTFLHRSFGAPIYVSVVNIHLMKNKPSYYRIVTNRPEISVPGACRYSREVAQRNNSVDFH----LILTREDIGPAGFAAMYTMC-SRRSCALVKENGPDTSFVITHELAHALGIDHD-EDDGCGRENLSGGNIMVKKLYATSSNFRWSKCSAKMIWQNLKYFTCLKNKPKMLPTFKKSMDWLPGELMGIKDQCRSYHGSSALPCTPRNPLTACRYLWCRPNQSAPCQPVWWHA----PLEGSTCAKSKWCKRGRCVTKMKIKPV--NGGWSKYSEFTPPCNRKSTRWIVQHRNRSCTNPKPRLSGKKCQGSPNQYRI 2162
            HG++ V NY + LMN V   +   S G  I +++V + ++  + S   I    P  S+   CR++    +++ S   H    + LTR+D GP+G+A +  MC   RSCAL  E+G  ++FVI HE  H LG++HD + +GC  E  S G++M   + A    F WS+CS   + + L  + CL + P   P + +  + LPG    + +QCR   GS    C        C+ LWC    S P  P +       PL+G+ CA  KWC +G C+ K   +    +GGWS +++F   C+R S    V+ R+RSC NP P   G+ C G   +Y++
Sbjct:  275 HGKEHVQNYVLTLMNIVDEIYHDESLGVHINIALVRLIMVGYRQSLSLIERGNPSRSLEQVCRWAHSQQRQDPSHAEHHDHVVFLTRQDFGPSGYAPVTGMCHPLRSCALNHEDGFSSAFVIAHETGHVLGMEHDGQGNGCADET-SLGSVMAPLVQAAFHRFHWSRCSKLELSRYLPSYDCLLDDP-FDPAWPQPPE-LPGINYSMDEQCRFDFGSGYQTCLAFRTFEPCKQLWC----SHPDNPYFCKTKKGPPLDGTECAPGKWCFKGHCIWKSPEQTYGQDGGWSSWTKFG-SCSR-SCGGGVRSRSRSCNNPSPAYGGRLCLGPMFEYQV 600
The following BLAST results are available for this feature:
BLAST of TCONS_00049462 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS142.389e-4333.43A disintegrin and metalloproteinase with thrombosp... [more]
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