TCONS_00050809 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050809
Unique NameTCONS_00050809
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2126

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050809 ID=TCONS_00050809|Name=TCONS_00050809|organism=Clytia hemisphaerica|type=transcript|length=2126bp
AGCAAAAACAACTACAACTACTGCTACAagtaaagaaaatatcaaaacca
tGGATGGAATGGAAATAAAAGATATGAAGTTAGTGCCATGCACTCAATCT
AAATATGTTGTTCCTGGTCGTGTTACGTTCAATCAGAATGGTCGGCAACG
AAAATGGGATTACGTTAAAGTTCACGATTCGGTATCCATTTTGATTTACA
ACAAGACCAGAGATGCATTTGTGTTGGTAAGACAATTCAGACCAGCACCT
TATCTGAACATCAATTCCAAAATGTTGAAAGAAGAAGTTTCAgacattga
aaataaatcatctgaaaagaaagatttcaaaacagTTGCTCCCTTTGAGC
TTGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAACGTTCT
TTAGTTGAAATAGCACAAAGTGAAATTGAAGAAGAGACAGGTTATATTGT
CCCTTTGGAAAACATCAAACAAATATTCAGACATACTGCGACAGGACATT
CAGGGAATATGGGTACTGCATTTTATGCTGAGGTGACAGATGACATGAAA
ACAGCCAAAGGTGGTGGTGTCCAAGATTCTGaataaacaaaacaaaacat
ggAAGAATTAAAAATCAGTGATATGCAACTGGCTCCTTTTGTTGACTCCG
ACGAATTACCAATCGGACGCGTTGCTTTCAAACAGaatgGATGCAAACGC
CTTTGGGATTACGTGGATTACAAAGATCAAATTCAAGCTCTTGTCTACAA
CAAAACCAGAGATGCTTTTGTTCTACGCAAAGAATTCAGACCTGCACCTT
ATCTGAACATCAATtccaaaatgttaaaagaagaagtttcagacattgaa
aataaatcaTCTGAAAAGAAAGAATTCAAAACAGTTGCTCCCTTTGAGCT
TGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAACGTCCTC
TAGTTGAAATTACAAAAGATGCAATCTCTCAAATGATGGGTTATAACGTA
GAAGAGAAACAAATCAAGCGAATTTATCAGACCAATCATGTTGGATATTC
AGGTGACCGATGTGATATATACATTGTGGAAGTGACAGATGAAATGttga
taaaagatttcaaaccTGATGCTGATCTcgttgaatatttttatttgtca
aGGAATGATGCTCAGGAGTTTGCAACGAGTGATGAATACGTGAAAAATAG
TAATGTTATTGCATCTATATTATGGTGTTTCTTGCACAATATCTTTTGAG
CTTGTGGTTGGCTCATAATGTTTCatcattttaaaaagaataatcAAATA
TGTTTGAGAGATTCTGCCGAAAGATACTTTGTCGACTAAAACCAATAAAA
TCGAAATCTTTCGAAAAATGTTCAAAGTATGCGAGGGGTCTGGAGCCTTG
TTTATATAAAGAGATTTCGCCAAGGACCTTGGAATGGGTTGCAAGTTGAA
AATTGTAAATAAATATCATGCATTTAAATGTTTTGACTTAATTCTACATG
GGAATCTATCTGGCTTTTCCAATATACAGTGTGtctcaaaaaaagtcaaa
aaaattttatataaactaaaatcctcataatttgtgccaaattttagTCC
ACGAATACTTATTTTTCAGTATCAAAAACCTTTGCACTCATCTTTGGGAA
TTTGgatatctattgattgaacagagaattattgtcttatttcaattatt
ctatACCCAGTTTAGATgttgagttttgaggattttactgTGTATtaaaa
tttgtccgcttttttttgggacacgctgtaaaattaattttagctATTCT
TATTTTTACGTAATAATGATATAGTTTGCAAAACATTGAGATAaactttt
ctcaattttttttcccaAAGAGATATTATATTATGAAGTTTATGTATTGA
CAACATTACTGTAACGACTATTTAATTGCAACAAAGTTGATTTTGATCTT
TTACCAATTGATGTGCATTTATAGGTAATGAATGACGTCAGTTAAATCAA
GATGATGCCAGCACCTTTTCATTAATTACTTCACTCTGTTGTACTATGAA
AAAtctctattttattttatattttagtatttttcgCAGTAATCCTTTGG
TGGGTTATTGTATTTTATATTTGAAT
Run BLAST on NCBI

protein sequence of TCONS_00050809-protein

>TCONS_00050809-protein ID=TCONS_00050809-protein|Name=TCONS_00050809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MEELKISDMQLAPFVDSDELPIGRVAFKQNGCKRLWDYVDYKDQIQALVY
NKTRDAFVLRKEFRPAPYLNINSKMLKEEVSDIENKSSEKKEFKTVAPFE
LGVTYELCAGIVDQKRPLVEITKDAISQMMGYNVEEKQIKRIYQTNHVGY
SGDRCDIYIVEVTDEMLIKDFKPDADLVEYFYLSRNDAQEFATSDEYVKN
SNVIASILWCFLHNIF
Run BLAST on NCBI

transcript from alignment at scaffold_189:247720..252652+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050809 ID=TCONS_00050809|Name=TCONS_00050809|organism=Clytia hemisphaerica|type=transcript|length=4933bp|location=Sequence derived from alignment at scaffold_189:247720..252652+ (Clytia hemisphaerica)
AGCAAAAACAACTACAACTACTGCTACAagtaaagaaaatatcaaaacca tGGATGGAATGGAAATAAAAGATATGAAGTTAGTGCCATGCACTCAATCT AAATATGTTGTTCCTGGTCGTGTTACGTTCAATCAGGTAAAAATGACAAT ACAGGATTTGTTTTGTTTCCCATAGTGGTTCATTTATGtctgtttttgta tatttttggatgaaTGAGAtgggatttttaatttttaagtagAGTTATGA TATTTTTCTGTTTAACTTGGCTTTTATCTTTACtcaatttttaaagtttt ctttttttgtcttgAATCGGGATTCTTTCTCTATTTCTCCTCAAAACTTG AAAGATACAAAGGAATGTGTATTGCATTGAAGTTTGGATTTGTATTGTTT GCATTAActcaaaaatttttcttcactCTTTTCTCTTAGAATGGTCGGCA ACGAAAATGGGATTACGTTAAAGTTCACGATTCGTAGGTTTCCTTTCTCT TAAACatagtattcatgatatgcaccctTGCAATGTCTTCACACGTCGCA TTGCGTAATATTACGTAATCTGTTCTTGCCGCCATGTTGGTTTGAATAAA AAATCCGCGGCAAAATAATCAGGTGGCAAATTCAATGTGTTTTGTCTCCC AAACCCTTAAAATACACCCAGACCCCTACCTCTCCTTTCTGGGAACTTGA TATCTCAAAATTCAGATTTTACAAGTCACGTCAAATAACATGAAGATAGC AGGTGCATCCGATATTTCTAAGATATTCTGCACAATGAAAAGAATAAGAA GATTATGATGAATTCTATTGCTTTTTTACCTCAAATGATCGATCTGTGta ccaaataaaaaaagaattcctTTAATCAAAGAACTCGACGGTTGTCCTGG AATAATTAAATTATACTCTTATTTATTAGCACTTACTTTTTCATTATCAT ATAATTTAGGGTATCCATTTTGATTTACAACAAGACCAGAGATGCATTTG TGTTGGTAAGACAATTCAGACCAGGTAAAAGGATTAAGTTCACATAATTT TTACTCTCCCGCAGTGTGATGATGGGTCTTTCCTTTgaatcaaacaaaaa tatacAAACTGGCACCAATTTTGACCTGTTAATACAAACTTGTTGCCATT ATTGTAGGTTTATGCTAACAAATCTAGCTCCTAAGAGGCCTTGTTAAcat aaaaaggtcaaattaGAAAGATACTGTATACACTTCTTAATACTTGGAAC GTTGAACCTTGCGTCAATTTCTTGGTGCGAGCATTGTGGGGCAACTTACT GTCAACCGGATATGCCATTTTATCATAAAGAAAGCCGGTCATGATTAATA ATAGATATAATAGATCTTTTTCACGCGCAATGCTTACCTCGTTTACtaaa tattgctatggtaactAATTGAAGATTCGAAGAGGAGTTCGTGAGAAGTT TACTCtataaacaaaattaacaatTGAAGACTTTCAGAgagtcgttgcac tcaaaatattttatgaaacaaTTAGTTTTTATTACTTGTTTTCGTTCTTA CGTTGATCATCAATCACGATAAAAACCTTCTTCGTGTTCTTGTAATTCCA GCACCTTATCTGAACATCAATTCCAAAATGTTGAAAGAAGAAGTTTCAga cattgaaaataaatcatctgaaaagaaagatttcaaaacagTTGCTCCCT TTGAGCTTGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAA CGTTCTTTAGTTGAAATAGCACAAAGTGAAATTGAAGAAGAGACAGGTTA TATTGTCCCTTTGGAAAACATCAAACAAATATTCAGACATACTGCGACAG GACATTCAGGGAATATGGGTACTGCATTTTATGCTGAGGTGACAGATGAC ATGAAAACAGCCAAAGGTGGTGGTGTCCAAGATTCTGGTGAATTCATTGA TCTGTATTACCTACCAAGGACTGATGCTAAAGATTTTGCTCTTGATGAGA GATATGTAAAGCCTTCAAGCTTCATTGCAGCCATAatgtggtttttcatc aatcagcaaaaataaataaaaatgaaaaataatttttatttaagtttcat tttcattttttttgtagtaTTTTGTAATCaatcagtttgaatgataaaaa tcatttttatatttattgGACTGTTAGGGCTTTTCCTCATTTTATTTTCT TCCTTAGAAATACAAtacaataaaatgaaaatgcttttgaTCTTTACCTG TAATTTTTAATTAtagaataaacaaaacaaaacatggAAGAATTAAAAAT CAGTGATATGCAACTGGCTCCTTTTGTTGACTCCGACGAATTACCAATCG GACGCGTTGCTTTCAAACAGGTGAAACCAGTTAATAGTGGGTGTTCATTG AAAAAGGGAAATTATATAAATGCAAATTCTGATAATTATGTCCTaacttt tcaatttatttttcgaaaatccattATCATTACATTAAGAGTTGAATATC TCTTGAACAAAGAGCTTCCATCtttatatttataatttttcgTTACTCCA GTGagacaataaattttgagaattttaatcTGTTCCCACGTTATTCCAAA AACAATCAATctcttattattattatttgacGAAAGTTTTCTTTTAGGTA GATTTACATAGAATTCCCATTTCCGATCAAGATCTCCAAATTTTTATAAA GCTGAtgaaaatcaatgttttttttctttcagaatgGATGCAAACGCCTT TGGGATTACGTGGATTACAAAGATCAGTAAGCACTCGTGACAGCGTAttc cacagatatcttatatgaaacaatagatagagctactctgtatttccctA GCAACAACAGTTGAcgcaaaataatgcgccatcgTTGCTGAAAGTAGACc acagttcggtaccggcaatttgcTCAAGCAAAATCATTGAATTCCAAAGT CTATCGGCGCGAAAATGATTTAATGTCGACTTTTGCATATGATTTTGACG AGATATTTAGCATCATTAGTTTAACATTCGTTCTTTTATCTTAGAATTCA AGCTCTTGTCTACAACAAAACCAGAGATGCTTTTGTTCTACGCAAAGAAT TCAGACCTGGTATGAAAAATGTATTAAATTATAATCGGAAAGTGATGAGA TTGAACAAGTTCCTTTCTTTCTCTCTCCCACTTTCAACGGAATTCGGCAT TTTAGTTGCTGTACATCTTCTTATCCAATCTACAGGGTGTCCTTTTAAAA AAGTACTTTGTCAGACCACTTCTTAGTTCTATAAGTAGAAGAATAATAAG AAGTTTCTTCTAAATACAGATCACAATAATGCAACAATGAAGCACAAAAG GTAGAGATTAACATTGTGATTACCGTAATAAAATAATTAACATTTCATTC AATGAATgtcttttttaaaaaacaattaaagATCGAAGTAATTAAAAAGa gtactttttatatttttgattgtGATACAAAcgcaaatattttttcaata acgATTTTCAGGACACCCTGTAGTGTGAATCCATATCCTTGTACTTTGCG AGTTTGGAGAAATACTCCAGGTAATTTTTTGTCTATTCCTTTTATTTACA GCACCTTATCTGAACATCAATtccaaaatgttaaaagaagaagtttcaga cattgaaaataaatcaTCTGAAAAGAAAGAATTCAAAACAGTTGCTCCCT TTGAGCTTGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAA CGTCCTCTAGTTGAAATTACAAAAGATGCAATCTCTCAAATGATGGGTTA TAACGTAGAAGAGAAACAAATCAAGCGAATTTATCAGACCAATCATGTTG GATATTCAGGTGACCGATGTGATATATACATTGTGGAAGTGACAGATGAA ATGttgataaaagatttcaaaccTGATGCTGATCTcgttgaatattttta tttgtcaaGGAATGATGCTCAGGAGTTTGCAACGAGTGATGAATACGTGA AAAATAGTAATGTTATTGCATCTATATTATGGTGTTTCTTGCACAATATC TTTTGAGCTTGTGGTTGGCTCATAATGTTTCatcattttaaaaagaataa tcAAATATGTTTGAGAGATTCTGCCGAAAGATACTTTGTCGACTAAAACC AATAAAATCGAAATCTTTCGAAAAATGTTCAAAGTATGCGAGGGGTCTGG AGCCTTGTTTATATAAAGAGATTTCGCCAAGGACCTTGGAATGGGTTGCA AGTTGAAAATTGTAAATAAATATCATGCATTTAAATGTTTTGACTTAATT CTACATGGGAATCTATCTGGCTTTTCCAATATACAGTGTGtctcaaaaaa agtcaaaaaaattttatataaactaaaatcctcataatttgtgccaaatt ttagTCCACGAATACTTATTTTTCAGTATCAAAAACCTTTGCACTCATCT TTGGGAATTTGgatatctattgattgaacagagaattattgtcttatttc aattattctatACCCAGTTTAGATgttgagttttgaggattttactgTGT ATtaaaatttgtccgcttttttttgggacacgctgtaaaattaattttag ctATTCTTATTTTTACGTAATAATGATATAGTTTGCAAAACATTGAGATA aacttttctcaattttttttcccaAAGAGATATTATATTATGAAGTTTAT GTATTGACAACATTACTGTAACGACTATTTAATTGCAACAAAGTTGATTT TGATCTTTTACCAATTGATGTGCATTTATAGGTAATGAATGACGTCAGTT AAATCAAGATGATGCCAGCACCTTTTCATTAATTACTTCACTCTGTTGTA CTATGAAAAAtctctattttattttatattttagtatttttcgCAGTAAT CCTTTGGTGGGTTATTGTATTTTATATTTGAAT

Coding sequence (CDS) from alignment at scaffold_189:247720..252652+

>TCONS_00050809 ID=TCONS_00050809|Name=TCONS_00050809|organism=Clytia hemisphaerica|type=CDS|length=2604bp|location=Sequence derived from alignment at scaffold_189:247720..252652+ (Clytia hemisphaerica)
atggAAGAATTAAAAATCAGTGATATGCAACTGGCTCCTTTTGTTGACTC
CGACGAATTACCAATCGGACGCGTTGCTTTCAAACAGaatgGATGCAAAC
GCCTTTGGGATTACGTGGATTACAAAGATCAAATTCAAGCTCTTGTCTAC
AACAAAACCAGAGATGCTTTTGTTCTACGCAAAGAATTCAGACCTGCACC
TTATCTGAACATCAATtccaaaatgttaaaagaagaagtttcagacattg
aaaataaatcaTCTGAAAAGAAAGAATTCAAAACAGTTGCTCCCTTTGAG
CTTGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAACGTCC
TCTAGTTGAAATTACAAAAGATGCAATCTCTCAAATGATGGGTTATAACG
TAGAAGAGAAACAAATCAAGCGAATTTATCAGACCAATCATGTTGGATAT
TCAGGTGACCGATGTGATATATACATTGTGGAAGTGACAGATGAAATGtt
gataaaagatttcaaaccTGATGCTGATCTcgttgaatatttttatttgt
caaGGAATGATGCTCAGGAGTTTGCAACGAGTGATGAATACGTGAAAAAT
AGTAATGTTATTGCATCTATATTATGGTGTTTCTTGCACAATATCTTTTG
AatggAAGAATTAAAAATCAGTGATATGCAACTGGCTCCTTTTGTTGACT
CCGACGAATTACCAATCGGACGCGTTGCTTTCAAACAGaatgGATGCAAA
CGCCTTTGGGATTACGTGGATTACAAAGATCAAATTCAAGCTCTTGTCTA
CAACAAAACCAGAGATGCTTTTGTTCTACGCAAAGAATTCAGACCTGCAC
CTTATCTGAACATCAATtccaaaatgttaaaagaagaagtttcagacatt
gaaaataaatcaTCTGAAAAGAAAGAATTCAAAACAGTTGCTCCCTTTGA
GCTTGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAACGTC
CTCTAGTTGAAATTACAAAAGATGCAATCTCTCAAATGATGGGTTATAAC
GTAGAAGAGAAACAAATCAAGCGAATTTATCAGACCAATCATGTTGGATA
TTCAGGTGACCGATGTGATATATACATTGTGGAAGTGACAGATGAAATGt
tgataaaagatttcaaaccTGATGCTGATCTcgttgaatatttttatttg
tcaaGGAATGATGCTCAGGAGTTTGCAACGAGTGATGAATACGTGAAAAA
TAGTAATGTTATTGCATCTATATTATGGTGTTTCTTGCACAATATCTTTT
GAatggAAGAATTAAAAATCAGTGATATGCAACTGGCTCCTTTTGTTGAC
TCCGACGAATTACCAATCGGACGCGTTGCTTTCAAACAGaatgGATGCAA
ACGCCTTTGGGATTACGTGGATTACAAAGATCAAATTCAAGCTCTTGTCT
ACAACAAAACCAGAGATGCTTTTGTTCTACGCAAAGAATTCAGACCTGCA
CCTTATCTGAACATCAATtccaaaatgttaaaagaagaagtttcagacat
tgaaaataaatcaTCTGAAAAGAAAGAATTCAAAACAGTTGCTCCCTTTG
AGCTTGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAACGT
CCTCTAGTTGAAATTACAAAAGATGCAATCTCTCAAATGATGGGTTATAA
CGTAGAAGAGAAACAAATCAAGCGAATTTATCAGACCAATCATGTTGGAT
ATTCAGGTGACCGATGTGATATATACATTGTGGAAGTGACAGATGAAATG
ttgataaaagatttcaaaccTGATGCTGATCTcgttgaatatttttattt
gtcaaGGAATGATGCTCAGGAGTTTGCAACGAGTGATGAATACGTGAAAA
ATAGTAATGTTATTGCATCTATATTATGGTGTTTCTTGCACAATATCTTT
TGAatggAAGAATTAAAAATCAGTGATATGCAACTGGCTCCTTTTGTTGA
CTCCGACGAATTACCAATCGGACGCGTTGCTTTCAAACAGaatgGATGCA
AACGCCTTTGGGATTACGTGGATTACAAAGATCAAATTCAAGCTCTTGTC
TACAACAAAACCAGAGATGCTTTTGTTCTACGCAAAGAATTCAGACCTGC
ACCTTATCTGAACATCAATtccaaaatgttaaaagaagaagtttcagaca
ttgaaaataaatcaTCTGAAAAGAAAGAATTCAAAACAGTTGCTCCCTTT
GAGCTTGGTGTCACTTATGAATTATGTGCTGGTATAGTTGACCAAAAACG
TCCTCTAGTTGAAATTACAAAAGATGCAATCTCTCAAATGATGGGTTATA
ACGTAGAAGAGAAACAAATCAAGCGAATTTATCAGACCAATCATGTTGGA
TATTCAGGTGACCGATGTGATATATACATTGTGGAAGTGACAGATGAAAT
GttgataaaagatttcaaaccTGATGCTGATCTcgttgaatatttttatt
tgtcaaGGAATGATGCTCAGGAGTTTGCAACGAGTGATGAATACGTGAAA
AATAGTAATGTTATTGCATCTATATTATGGTGTTTCTTGCACAATATCTT
TTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032187XLOC_032187Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050809-exon-scaffold_189-1491911889:247720..247855TCONS_00050809-exon-scaffold_189-1491911889:247720..247855Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:247720..247855TCONS_00050809-exon-scaffold_189-1510915933:247720..247855Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:247720..247855TCONS_00050809-exon-scaffold_189-1575043694:247720..247855Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1491911889:248159..248202TCONS_00050809-exon-scaffold_189-1491911889:248159..248202Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:248159..248202TCONS_00050809-exon-scaffold_189-1510915933:248159..248202Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:248159..248202TCONS_00050809-exon-scaffold_189-1575043694:248159..248202Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1491911889:248679..248743TCONS_00050809-exon-scaffold_189-1491911889:248679..248743Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:248679..248743TCONS_00050809-exon-scaffold_189-1510915933:248679..248743Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:248679..248743TCONS_00050809-exon-scaffold_189-1575043694:248679..248743Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1491911889:249321..249656TCONS_00050809-exon-scaffold_189-1491911889:249321..249656Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:249321..249656TCONS_00050809-exon-scaffold_189-1510915933:249321..249656Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:249321..249656TCONS_00050809-exon-scaffold_189-1575043694:249321..249656Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1491911889:249986..250089TCONS_00050809-exon-scaffold_189-1491911889:249986..250089Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:249986..250089TCONS_00050809-exon-scaffold_189-1510915933:249986..250089Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:249986..250089TCONS_00050809-exon-scaffold_189-1575043694:249986..250089Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1491911889:250452..250495TCONS_00050809-exon-scaffold_189-1491911889:250452..250495Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:250452..250495TCONS_00050809-exon-scaffold_189-1510915933:250452..250495Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:250452..250495TCONS_00050809-exon-scaffold_189-1575043694:250452..250495Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1491911889:250764..250828TCONS_00050809-exon-scaffold_189-1491911889:250764..250828Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:250764..250828TCONS_00050809-exon-scaffold_189-1510915933:250764..250828Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:250764..250828TCONS_00050809-exon-scaffold_189-1575043694:250764..250828Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1491911889:251321..252652TCONS_00050809-exon-scaffold_189-1491911889:251321..252652Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1510915933:251321..252652TCONS_00050809-exon-scaffold_189-1510915933:251321..252652Clytia hemisphaericaexon
TCONS_00050809-exon-scaffold_189-1575043694:251321..252652TCONS_00050809-exon-scaffold_189-1575043694:251321..252652Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050809-proteinTCONS_00050809-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_189supercontigscaffold_189:247720..252652 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.31547 4.32278 1.1354 0 4.25067 2.65997 1.92845 0.575421 4.62423 2.20133 7.41201 2.34409 2.25619 2.50109 2.60484 3.88735 2.46948 4.98477 1.19416 2.20079 4.87638 4.21251 17.9633 14.4291 0.0177881 1.43179 7.70656 5.69509 7.14764 10.1527
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
Blast
BLAST of TCONS_00050809 vs. Swiss-Prot (Human)
Match: NUD14 (Uridine diphosphate glucose pyrophosphatase OS=Homo sapiens GN=NUDT14 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.456e-31
Identity = 60/163 (36.81%), Postives = 96/163 (58.90%), Query Frame = 2
Query:   89 CTQSKYVVPGRVTFNQNGRQRKWDYVKVHDSVSILIYNKTRDAFVLVRQFRPAPYLNINSKMLKEEVSDIENKSSEKKDFKTVAPFELGVTYELCAGIVDQK-RSLVEIAQSEIEEETGYIVPLENIKQIFRH-TATGHSGNMGTAFYAEVTDDMKTAKGGGV 571
            C  S Y+ P  + + QNG Q+ WD++K HDSV++L++N +R + VLV+QFRPA Y     +     ++ ++      ++ +   P   GVT ELCAG+VDQ   SL E+A  E  EE GY +   +++++  + +  G +G+  T FY EVTD  ++  GGG+
Sbjct:   12 CAASPYLRPLTLHYRQNGAQKSWDFMKTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDG--PRELQPALPGSAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGL 172          

HSP 2 Score: 93.2041 bits (230), Expect = 7.363e-21
Identity = 57/198 (28.79%), Postives = 97/198 (48.99%), Query Frame = 2
Query:  677 FKQNGCKRLWDYVDYKDQIQALVYNKTRDAFVLRKEFRPAPYLNINSKMLKEEVSDIENKSSEKKEFKTVAPFELGVTYELCAGIVDQK-RPLVEITKDAISQMMGYNVEEKQIKRIYQ-TNHVGYSGDRCDIYIVEVTDEM-------LIKDFKPDADLVEYFYLSRNDAQEFATSDEYVKNSNVIASILWCFLHNI 1243
            ++QNG ++ WD++   D +  L++N +R + VL K+FRPA Y     +     ++ ++      +E +   P   GVT ELCAG+VDQ    L E+      +  GY++    ++R+    + VG +G R  ++  EVTD         L++    + +L+E  +L    AQ FA   +  K   VI  + W FL  +
Sbjct:   25 YRQNGAQKSWDFMKTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDG--PRELQPALPGSAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVE----EGELIEVVHLPLEGAQAFADDPDIPKTLGVIFGVSW-FLSQV 215          
The following BLAST results are available for this feature:
BLAST of TCONS_00050809 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUD148.456e-3136.81Uridine diphosphate glucose pyrophosphatase OS=Hom... [more]
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