TCONS_00050873 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050873
Unique NameTCONS_00050873
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1646

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050873 ID=TCONS_00050873|Name=TCONS_00050873|organism=Clytia hemisphaerica|type=transcript|length=1646bp
AAGCATTTCCAGGTATTTCACATAGAAATGAGAGTCAATATACAATAAAG
TACAAGGATGAGTAGCAAAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGt
TCTACAATGATGTCGAAGCAAGGAAATATACATCAAATActcgaatgatt
gaaattcaaaatcagATGACTTTGAGAGCCTTGGAATTGTTGGCCCTACC
AGAAGATGAACCTTGCTTCCTTTTGGATATTGGgtGTGGGTCAGGGTTGA
GTGGTGAGGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGATATC
AGTAGTTCCATGTTGGATATTGCAAAGGAAAGAGAAGTTGAAGGTGATTT
ATTGGAACTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAACATTTG
ATGGTTGCATCAGTATTTCAGCCCTTCAGTGGCTTTGTAATGTTGACAAA
AAATGGCATAATCCTGTAAAGAGATTACACTCATTTTTCACTACATTATA
CACAAGTCTTAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAGACA
GTCCCAGTCAGGTAGAACTAATAACATCACAAGCAATGCGTTCTGGTTTT
TCTGGCGGTGTTGTTGTTGATTATCCCAACAGTACAagagcaaaaaaAAT
GTTTCTGGTTTTGTTTGCCGGAGTCAGTAATGCTGTCTTACCTCAGGCCT
TGGGAACAGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGAGAG
AGAAATAATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaaaga
atggattcaaaagaagaaagatcGGAAACGTAGACAAGGGAAAGATGTTC
GAGCTGATTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGAGAT
TGGCTTACTTACAGTTGTCATATTGGGGCTTTGATCAACTGGTTTGAGTG
GTGTATAGTTTCCAATCGATTGAGTTGGTGATGTGGTAGAAATGCTCAGT
GTGTACCTTTACACAATACCAACAATACTTATCAATAAATTCTTTGATAA
TTTAGGATTTCATTAGATTTggcaaaaactgattttttactaaaaatgaa
atttcttacCATCATTATTTTATTGGAAActctatttttattcaaaattt
tgtttttatacaatGCCAAAGAAATTCATATCATCTTATACAAGATAATA
tacaatttttgtaaacatgaCCAACACCTTGTGGGTGTATTTTGGTTTGT
TCTGCTATTATAAGCCATGAAATTATCAAACATGTTCATTAATATCATCA
TAATATCACTAGCATAATAAACACTTTGTGGAGTAGAACAAggatagaaa
attttttttcatagagtCTAGAGGTGCTGATGGATTCTCCTTGGAAGACT
GAAAATTTCTCCCTTTCAATTTCGACTGAAAATTCCTTTTTGTGTACAGA
TAGTTTAACAAATTTCCATGACAACACATCACCAGGTGTTGTACTTACCT
GGTACAATAGTTTCTCttgaattttgtatttttttgagaGGAAAAGATCT
TTATAATACTGTTTATTGTGTCTCTCTCTGGCTCTACAAATATTCCAATT
TTTATTAAGATTGTCGTCTGTAGCTTGAAACCTGCCATTAGAGTTT
Run BLAST on NCBI

transcript from alignment at scaffold_19:156526..164922+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050873 ID=TCONS_00050873|Name=TCONS_00050873|organism=Clytia hemisphaerica|type=transcript|length=8397bp|location=Sequence derived from alignment at scaffold_19:156526..164922+ (Clytia hemisphaerica)
AAGCATTTCCAGGTATTTCACATAGAAATGAGAGGTATTTCATTgttata
aacttcatttttttctcacttttcgCTTGTATATAATATTTGCTGTACTA
ACTGTATTGTATAAGGGCTGTGAAGCAATCCAGACACCACCTGTACCTCA
ATTTGCAAGTTGCTAGTATAAAAATCCCAAGCTTAGCTAAATGACTGTCT
GTGTCATGTACAAACAACTAAACAAACATTTAAAAccaaacaatttgaaa
aatttgcaccatttttttttaatcaaaatgtcAGACGTGCAACaaactgt
aaatttttttgacttggcATAAAAAATATTGCCCTAGCAGTCAGGAGTTC
TATCCTaattaagcatatttttttcgatcgcacggactttcttaattagg
attatccctttgtttttcaatcctaattaagaatatgatttttaactcaa
tttatgtttggatttctagaaagcttacccattcattgtcaacatatttt
ttatttgaaagtaatctcttcatggaataaaaagatatagtcaaatcttg
tagttgtagggtcatttttcaaaatatttttgccaaaatcgattttcgca
tttcgccattttaccctacgcaaacacACGTGCTTTGTTTCACATTGGGC
GCGCGagtcagtctaaacttaaactcctatatcaggattataagctaggc
tagtcttacctcttttatcttttcctttacaacaatacaatgctaacaag
ttgacacaacacatgtctacatgtacattgacaagtaatctctgagagaa
gtttttatagaaatctgcaacaaaaacgaaagtggtctcttctactgatt
gcttcccagcgctccttcgcagctgtttatcaaatttccatcaatgaggt
tgccgcatttcaaatGGCCGCTTCTTTTTGGAACCcatggcctttcagtg
ccttgcacgacgggtggctgtaaaatcccacccttcatatatttttttca
atccatgatccgtggcttaggtttttttctcatcttcaatttactgaaga
aagcgggaatttgatgcaagagttagattgtcaacaaatcAAAGTGcagt
aaaaaatcattgaataaaagaagaacttaaaatcttaaatattttcattt
tgaagaatagatgcaaaaaagtgaaacatagaaaagtttcatttttcatt
gcattaatcgaaatgggggatttggaaaattttctatgtttagttttttg
cacaaacccctgtaactatgggcgagcaccccattgctaagatgttggct
tgaaatcaaaaatgaaaccactcaaaacgaaaataaaattggcccgtact
cgaaatcccgtaatcttgatatacaagtttaagtctatactggcGAGTGG
CGATGATACAAAGTGTGTGAATGAAATCAGTTGCGTGAAGGCTTCGGGAG
ACAATGCGTACGCGGAGACGATAGAGCGTCACAAATTCATGCCGTTCAGA
GCCATTGGTGAGTCATGTAttgatgtttttcataattggactgaaaaaaa
tagaaataatgaaaatttttagaataatgaaattttttacgCGGAAGCTC
AAACACACGCGGACAGGTAACGGTAAACTAATACCTGACTTCCCTCACCT
AATAAGAAAATAGATTCACtattagctttccaaaaatttataaCTTTTGT
TCAGGTGATGTCTCATTAAAAAGTTATTACCATTCTCATAAAAGGtccat
ttttgaagaaatgCATGCATCCTACAGTGCGGGTTTATTTCACGGAATGA
AAGCGGAGTCTAAGGGTTTGTAAAAATTGTTAAGGTCATAGCATTTGTCA
ATATTGACATTTTAAAATGATGCTTTCGCTACTGAAAATACGGAGATGCA
GAATgggttaaagttctatttctaTTCTTTAATTGacataaactttacaa
aaagcTATTCTCGGCAAAGTATGTTGGGTTGCCCATTTTTTCTCGGAGAA
CAtacatagtttctaccccccctacatttaggggggggtcttgggttttg
atgaaccaaaagcaagggaggggtgttaaaagtatgaAATAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNggtgtgaaattttaaatgaatttcctaag
ggggggttagcacttaaggggggtcctcttacctaagggggggggtcttg
acccctctagaaactatggaCATATTTTCTCCAATCCAATCTACACAATT
GTTACAAATTTTAGGCTGGatattttttagaattattttataaacagaca
gttaaaaaaatatattaaggcgaaaatataaaaatgtagtgtttccggaa
tgcgggtgaaggaaaaaagctctcatgcagccggccggaaaaaacttttt
ttttgcttttcttgataacttaagatcattaaaatagaactttaaaaata
acttttatgtacaaaaagtataaagtaagccctgaatactaatgtatcaa
ctattagcaaacaaaacttgatttacaagctggaatatctaaccaaacga
cgtttgatagcttgaacggtcaaccTGATTTTCTTTATGACTAACCATAT
AAATGAACCCATAGTTTGCAGCTGGgtcagaaaaaagtttttcttcacCC
AGCTGGTTtctggaaacactacatttttttattttcgactAATAGTCAAT
ATACAATAAAGTACAAGGATGAGTAGCAAAAGACCAGAGCTTAAGGCTCC
CCCAGAGGTGGTAAGCAAATTTGTTCATTATGTGCCAAGCTTCTAATTTT
ATGCCAATGTTATGGGCCACATTTACACTCATTGTTTCAAAAAGAAGCAC
ACACTGTAAAGTTGtttttaaaatctaatacatcaatttctatttctatt
tctttattagCATGAAACTTTTTAGTTTTATTTCGCTAAtggaacaaaaa
aaataaataaatgaaaaaatattattaagtaATTTAAAGACTATAAAACA
ACTATATCAAGAAATTTCTAATCAGTTtgctcttgatgaatttttttagt
TCTACAATGATGTCGAAGCAAGGAAATATACATCAAAGTAGGTTTCAAAC
TTTTTACAAAGATTTGATTAAACTTTTTGAGATCAATTCTCAATGTGTTG
TTTTTTCATTAACAATAAAAGAGTTggtttttgtataaaagttCATAAAT
TTTAAGCCTAACTCGCACTTTTGTTATAATTCTGTATGCATAGATTTTTa
aacagaaaattttaaatattatattattatatgaaatatcttttgaatac
AAGCTAGTTTTGAAATGCTTTTGAGGAATTGCTATaatattttcaatgat
tttttaactTCAGTActcgaatgattgaaattcaaaatcagATGACTTTG
AGAGCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGCTTCCTTTT
GGATATTGGGTTTGTACtagttacacgcttttttttaataagaaacctTC
ACTTGGCTCCAAGCCTGGAGTACCTTATtttccagagaatttcagcATCA
AAGATCCTTATCAAGTTCCTtctttacatagctgctaacaTTGGATTTAC
TAAGTATGTAGCATATGTATAAGTATAACAATGGACTAAAATACatcatt
aactttttttcttgttctcAGCCtgggcagttccttaacaaCCCCTTAGT
TTTCGAACTATTtgcagcctcaagttccttataaacataTTCCTCATAAA
AAAATGNGTTAGTTTTCAAACTATTtgcagcctcaagttccttataaaca
tattcctcataaaaaaatgtgtgaTTGATTTTATAAGGGTTGAACTATGA
TCATTATAAAATAAAGTTGGATATCACATGAAGTACTCTAAATCAGCTTT
TTAAAGCtgcaaagaaatttttttcctacaCATTTCTTGttcaaatcttt
ctttattttcagtCACACAGCATCCAGTTTATCTGTTTTTGATTAAATTA
ATGAacatgattttattatttttcaggtGTGGGTCAGGGTTGAGTGGTGA
GGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTT
CCATGTTGGGTATATTATTTTCACTCTTATCTTTCATGTATTTACACATT
CATTAGCTTTGTTTAGTCCCTTTAATAATGTGTCTATATAAAGCATATTA
ATTTAAACCTTGAATAAATTTATAATAGAaaacaagaattttcaaaaaag
attacTCATCCTAATTTGTAGATATTGCAAAGGAAAGAGAAGTTGAAGGT
GATTTATTGGAACTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAAC
ATTTGATGGTTGCATCAGGTTTTTTATTGTCTTATCTCTTTGTACTAGGG
TGCAACTCCTCTCTTCAAAGTAAATTTTCTGGTGATCCTTGAATTTTTAA
GAGATGGATCCTTTGCAATGGCAAAAATCTTGGAAACCCACTCTCACAGC
ATTTGAAAAATAAGTATTgtgaaaacaaaattaaattcatgCTTGATGCA
GAGGGGAGATTTTCTACATATGAAGCTTTAAAGTGAGCTCGATTGATTAA
ACAACATTTTCTTCCGTTTTCAGTATTTCAGCCCTTCAGTGGCTTTGTAA
TGTTGACAAAAAATGGCATAATCCTGTAAAGAGATTACACTCATTTTTCA
CTACATTATACACAAGTCTTGTAAGTtatattgttttcaaattttttatc
ataataCTACATTATGAAGATAAACTAACTTTCTCTCCTATTGCAAGTAG
AATAACGAAAGCATTCAGTGAGGaccttttttaaacatttgtttcccagg
catagccttcctggaaattattatctttttggaaacagatatctgtttcc
caattcaTTATGTCATCTCCTAAAAATATTGacctgtttctctctgatga
catcatcagctggagcggggaaacagatagttttaaaggaaaaagtTTTT
CCTAGAAAAACGAATCAACAAAAAggtctctcctggaaaagggaaacaga
tattttggGGAAATGGGCTTGTTGGCTGCTTCTGGAATAAGTTATTATCT
GGTTATATTCTTCTTATCAACTCaactttattttatattataagtCTTCT
TTTTGCTTTTAAGAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAG
ACAGTCCCAGTCAGGTAATATAATATTAAAATatataccaaaaaaataat
gGTATAGCCAATTACAATTCTAAAGAGAATTGCTAAAAATGTCATAACAT
TCattttgacatttcaaaataataacattTCCTATCAGCGTTTGTTACAT
TGCTTTGCCACATTTGTTTTAATTCTACTTTTATTCTAAACTGCACGTGA
TCCCTAATTCTACTCTTACTCTTAGGTAGAACTAATAACATCACAAGCAA
TGCGTTCTGGTTTTTCTGGCGGTGTTGTTGTTGATTATCCCAACAGTACA
agagcaaaaaagtaaataattcTTTATCAGAATACTCTAaggttcttttt
tataagagcaaagtctttaatttttataaatatttatgATTGCTCTTTAC
TTCTTGTTGAGTTGAGTTAAACTCTCATTCATCAGAAGAGTGCTTGACCA
ATCGGAATCCGAAGCATATATATACTATTGTCGAATGAAGTTAATGTGTT
TTATTTCTAATTTATTGAATGTTTGTTAATGATTGTTCTTTATAAATCAA
TATAGAGagtactagacggttcccgtcgtcgccaacgccggttaacggtt
ttgcttgcacatcaaaagcctttaaaatacgataatgtgggttaattcct
gacatcgttttggcttaaaatgccgaatacaaTAATAAAAATTATACTTC
TAAACTTTCTACATTAGTCAAAAttttcccgtttgttggcttcacatgag
gacagcttaagaccggcgcatatgcaatgcaaccaacattgaaacctttt
taaataatgttacacaaagtttaatcatcaaacaacaatgttggattttg
ttgcgtgtgttgatataaaataattcgaaatcgtgcaacaaaaatgccac
acctgacgtcgcagtactttttcatgaaattgatgtcagaacttttttcg
tttacaaatagcagtgtagagtcttctctaatccgagttttctacgcttg
tcaaacttagcgcgagactttttgtatcgaaggtggataggttttccagc
cgcgacgttcaaattttagaaaccttaacatatgttactgggctagcgtt
acagacatttttcataaactcatttagtatagtaagattaTTTCTGTCAA
AGTAAAGCTTACCACTAGACCTAAATTTCCTTCAGTCTGATGATTGCCCT
CACTAAGTGAATAATTTCTGAATGATTTGCGTTcaacttttaattctttt
ttaatagTACTTTTACCTATGTGAGATGATGACAGTTTTTGTCTTCCTTT
TATTCCTTAGAATGTTTCTGGTTTTGTTTGCCGGAGTCAGTAATGCTGTC
TTACCTCAGGTATGCAATTATGCTTTTGtttatcaaacatttttttactG
GCTGCTTGATAATGGGCTGTAACTATGAgttaaattcaaaacattttaat
aATTTCTTGCCGTTCTTGcatattgattattttttgtgtttaGGCCTTGG
GAACAGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGGTATGTA
AGTCTTTCTatgatattttaaaatttattgtttttagaATATCGCCAAGT
TTTGTACTAGGTATGTACCAATGTTCTACTTCTTTTATTTAGAGAGAGAA
ATAATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaaagaatgg
attcaaaagaagaaagatcGGAAACGTAGACAAGGGAAAGAGTAAGAGAT
CACACTTTATTTGCTTATTGCTTTTTACCACACTCCCTTNAAAAGAGTAA
GAGATCACACTCTATTTGCTTATTGCTTTTTACCACACTCCCTTGAACCA
TTTGCTAGTCTTTTGATAAGATGATATTCCTTGCATTGTGACCAGAAATA
TCTGTCAATTGGAGATTTCTACCTTTAAGGTCCTGCCCTGTATTTATTAT
TGAATTCAGAATGAAGAAataatattcttaaaattttccatttcagTGTT
CGAGCTGATTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGAGA
TTGGCTTACTTACAGTTGTCATATTGGGGCTTTGATCAACTGGTTTGAGT
GGTGTATAGTTTCCAATCGATTGAGTTGGTGATGTGGTAGAAATGCTCAG
TGTGTACCTTTACACAATACCAACAATACTTATCAATAAATTCTTTGATA
ATTTAGGATTTCATTAGATTTggcaaaaactgattttttactaaaaatga
aatttcttacCATCATTATTTTATTGGAAActctatttttattcaaaatt
ttgtttttatacaatGCCAAAGAAATTCATATCATCTTATACAAGATAAT
AtacaatttttgtaaacatgaCCAACACCTTGTGGGTGTATTTTGGTTTG
TTCTGCTATTATAAGCCATGAAATTATCAAACATGTTCATTAATATCATC
ATAATATCACTAGCATAATAAACACTTTGTGGAGTAGAACAAggatagaa
aattttttttcatagagtCTAGAGGTGCTGATGGATTCTCCTTGGAAGAC
TGAAAATTTCTCCCTTTCAATTTCGACTGAAAATTCCTTTTTGTGTACAG
ATAGTTTAACAAATTTCCATGACAACACATCACCAGGTGTTGTACTTACC
TGGTACAATAGTTTCTCttgaattttgtatttttttgagaGGAAAAGATC
TTTATAATACTGTTTATTGTGTCTCTCTCTGGCTCTACAAATATTCCAAT
TTTTATTAAGATTGTCGTCTGTAGCTTGAAACCTGCCATTAGAGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032241XLOC_032241Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050873-exon-scaffold_19-1491911889:156526..156559TCONS_00050873-exon-scaffold_19-1491911889:156526..156559Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:156526..156559TCONS_00050873-exon-scaffold_19-1510915933:156526..156559Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:156526..156559TCONS_00050873-exon-scaffold_19-1575043694:156526..156559Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:159621..159685TCONS_00050873-exon-scaffold_19-1491911889:159621..159685Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:159621..159685TCONS_00050873-exon-scaffold_19-1510915933:159621..159685Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:159621..159685TCONS_00050873-exon-scaffold_19-1575043694:159621..159685Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:159975..160012TCONS_00050873-exon-scaffold_19-1491911889:159975..160012Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:159975..160012TCONS_00050873-exon-scaffold_19-1510915933:159975..160012Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:159975..160012TCONS_00050873-exon-scaffold_19-1575043694:159975..160012Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:160289..160384TCONS_00050873-exon-scaffold_19-1491911889:160289..160384Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:160289..160384TCONS_00050873-exon-scaffold_19-1510915933:160289..160384Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:160289..160384TCONS_00050873-exon-scaffold_19-1575043694:160289..160384Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:160952..161034TCONS_00050873-exon-scaffold_19-1491911889:160952..161034Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:160952..161034TCONS_00050873-exon-scaffold_19-1510915933:160952..161034Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:160952..161034TCONS_00050873-exon-scaffold_19-1575043694:160952..161034Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:161197..161293TCONS_00050873-exon-scaffold_19-1491911889:161197..161293Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:161197..161293TCONS_00050873-exon-scaffold_19-1510915933:161197..161293Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:161197..161293TCONS_00050873-exon-scaffold_19-1575043694:161197..161293Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:161549..161645TCONS_00050873-exon-scaffold_19-1491911889:161549..161645Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:161549..161645TCONS_00050873-exon-scaffold_19-1510915933:161549..161645Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:161549..161645TCONS_00050873-exon-scaffold_19-1575043694:161549..161645Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:162089..162139TCONS_00050873-exon-scaffold_19-1491911889:162089..162139Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:162089..162139TCONS_00050873-exon-scaffold_19-1510915933:162089..162139Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:162089..162139TCONS_00050873-exon-scaffold_19-1575043694:162089..162139Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:162351..162436TCONS_00050873-exon-scaffold_19-1491911889:162351..162436Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:162351..162436TCONS_00050873-exon-scaffold_19-1510915933:162351..162436Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:162351..162436TCONS_00050873-exon-scaffold_19-1575043694:162351..162436Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:163436..163484TCONS_00050873-exon-scaffold_19-1491911889:163436..163484Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:163436..163484TCONS_00050873-exon-scaffold_19-1510915933:163436..163484Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:163436..163484TCONS_00050873-exon-scaffold_19-1575043694:163436..163484Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:163619..163668TCONS_00050873-exon-scaffold_19-1491911889:163619..163668Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:163619..163668TCONS_00050873-exon-scaffold_19-1510915933:163619..163668Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:163619..163668TCONS_00050873-exon-scaffold_19-1575043694:163619..163668Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:163768..163866TCONS_00050873-exon-scaffold_19-1491911889:163768..163866Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:163768..163866TCONS_00050873-exon-scaffold_19-1510915933:163768..163866Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:163768..163866TCONS_00050873-exon-scaffold_19-1575043694:163768..163866Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1491911889:164122..164922TCONS_00050873-exon-scaffold_19-1491911889:164122..164922Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1510915933:164122..164922TCONS_00050873-exon-scaffold_19-1510915933:164122..164922Clytia hemisphaericaexon
TCONS_00050873-exon-scaffold_19-1575043694:164122..164922TCONS_00050873-exon-scaffold_19-1575043694:164122..164922Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:156526..164922 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
99.3046	97.2867	45.8468	34.205	35.1099	29.374	41.2775	38.0756	45.2321	47.5996	42.5246	36.588	59.8447	70.2658	54.7375	54.4213	58.0188	64.0932	36.1284	36.0843	48.7643	50.3571	61.2193	60.386	24.2789	30.1365	41.2847	53.2631	40.7899	37.2301
Blast
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BLAST of TCONS_00050873 vs. Swiss-Prot (Human)
Match: BUD23 (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Homo sapiens GN=BUD23 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 1.325e-84
Identity = 131/212 (61.79%), Postives = 170/212 (80.19%), Query Frame = 1 
Query:   67 KRPELKAPPEVFYNDVEARKYTSNTRMIEIQNQMTXXXXXXXXXXXXXXCFLLDIGCGSGLSGEVLTEQGHYWVGFDISSSMLDIAKEREVEGDLLELDAGMGVPFRPGTFDGCISISALQWLCNVDKKWHNPVKRLHSFFTTLYTSLKRGGKAIFQFYPDSPSQVELITSQAMRSGFSGGVVVDYPNSTRAKKMFLVLFAGVSNAVLPQAL 702
            +RPE   PPE+FY++ EARKY  N+RMI+IQ +M  RALELL LPE++PC+LLDIGCG+GLSG  L+++GHYWVG DIS +MLD A +RE+EGDLL  D G G+PF+PGTFDGCISISA+QWLCN +KK  NP KRL+ FF +L++ L RG +A+ Q YP++  Q+ELIT+QA ++GFSGG+VVDYPNS +AKK +L LF+G S   +P+ L
Sbjct:    6 RRPEHGGPPELFYDETEARKYVRNSRMIDIQTRMAGRALELLYLPENKPCYLLDIGCGTGLSGSYLSDEGHYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGPS-TFIPEGL 216
The following BLAST results are available for this feature:
BLAST of TCONS_00050873 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BUD231.325e-8461.79Probable 18S rRNA (guanine-N(7))-methyltransferase... [more]
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