TCONS_00050874 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050874
Unique NameTCONS_00050874
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2030

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050874 ID=TCONS_00050874|Name=TCONS_00050874|organism=Clytia hemisphaerica|type=transcript|length=2030bp
cAAAGTGcagtaaaaaatcattgaataaaagaagaacttaaaatcttaaa
tattttcattttgaagaatagatgcaaaaaagtgaaacatagaaaagttt
catttttcattgcattaatcgaaatgggggatttggaaaattttctatgt
ttagttttttgcacaaacccctgtaactatgggcgagcaccccattgcta
agatgttggcttgaaatcaaaaatgaaaccactcaaaacgaaaataaaat
tggcccgtactcgaaatcccgtaatcttgatatacaagtttaagtctata
ctggcGAGTGGCGATGATACAAAGTGTGTGAATGAAATCAGTTGCGTGAA
GGCTTCGGGAGACAATGCGTACGCGGAGACGATAGAGCGTCACAAATTCA
TGCCGTTCAGAGCCATTGTCAATATACAATAAAGTACAAGGATGAGTAGC
AAAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGtTCTACAATGATGTCGA
AGCAAGGAAATATACATCAAATActcgaatgattgaaattcaaaatcagA
TGACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGC
TTCCTTTTGGATATTGGgtGTGGGTCAGGGTTGAGTGGTGAGGTATTGAC
AGAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTTCCATGTTGG
ATATTGCAAAGGAAAGAGAAGTTGAAGGTGATTTATTGGAACTGGATGCT
GGTATGGGAGTACCTTTCCGGCCAGGAACATTTGATGGTTGCATCAGTAT
TTCAGCCCTTCAGTGGCTTTGTAATGTTGACAAAAAATGGCATAATCCTG
TAAAGAGATTACACTCATTTTTCACTACATTATACACAAGTCTTAAAAGA
GGAGGCAAAGCCATTTTTCAGTTCTATCCAGACAGTCCCAGTCAGGTAGA
ACTAATAACATCACAAGCAATGCGTTCTGGTTTTTCTGGCGGTGTTGTTG
TTGATTATCCCAACAGTACAagagcaaaaaaAATGTTTCTGGTTTTGTTT
GCCGGAGTCAGTAATGCTGTCTTACCTCAGGCCTTGGGAACAGAAGGAGC
TGGAAATACTGTATCTTATACAACAAATAGAGAGAGAAATAATAACAGAA
ATGGTAGAGGGAAACCAtcaaagaaaagtaaagaatggattcaaaagaag
aaagatcGGAAACGTAGACAAGGGAAAGATGTTCGAGCTGATTCTAAGTA
TTCTggaagaaaaaggaaagttgCTTTTTGAGATTGGCTTACTTACAGTT
GTCATATTGGGGCTTTGATCAACTGGTTTGAGTGGTGTATAGTTTCCAAT
CGATTGAGTTGGTGATGTGGTAGAAATGCTCAGTGTGTACCTTTACACAA
TACCAACAATACTTATCAATAAATTCTTTGATAATTTAGGATTTCATTAG
ATTTggcaaaaactgattttttactaaaaatgaaatttcttacCATCATT
ATTTTATTGGAAActctatttttattcaaaattttgtttttatacaatGC
CAAAGAAATTCATATCATCTTATACAAGATAATAtacaatttttgtaaac
atgaCCAACACCTTGTGGGTGTATTTTGGTTTGTTCTGCTATTATAAGCC
ATGAAATTATCAAACATGTTCATTAATATCATCATAATATCACTAGCATA
ATAAACACTTTGTGGAGTAGAACAAggatagaaaattttttttcatagag
tCTAGAGGTGCTGATGGATTCTCCTTGGAAGACTGAAAATTTCTCCCTTT
CAATTTCGACTGAAAATTCCTTTTTGTGTACAGATAGTTTAACAAATTTC
CATGACAACACATCACCAGGTGTTGTACTTACCTGGTACAATAGTTTCTC
ttgaattttgtatttttttgagaGGAAAAGATCTTTATAATACTGTTTAT
TGTGTCTCTCTCTGGCTCTACAAATATTCCAATTTTTATTAAGATTGTCG
TCTGTAGCTTGAAACCTGCCATTAGAGTTT
Run BLAST on NCBI

protein sequence of TCONS_00050874-protein

>TCONS_00050874-protein ID=TCONS_00050874-protein|Name=TCONS_00050874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
MSSKRPELKAPPEVFYNDVEARKYTSNTRMIEIQNQMTLRALELLALPED
EPCFLLDIGCGSGLSGEVLTEQGHYWVGFDISSSMLDIAKEREVEGDLLE
LDAGMGVPFRPGTFDGCISISALQWLCNVDKKWHNPVKRLHSFFTTLYTS
LKRGGKAIFQFYPDSPSQVELITSQAMRSGFSGGVVVDYPNSTRAKKMFL
VLFAGVSNAVLPQALGTEGAGNTVSYTTNRERNNNRNGRGKPSKKSKEWI
QKKKDRKRRQGKDVRADSKYSGRKRKVAF
Run BLAST on NCBI

transcript from alignment at scaffold_19:157615..164922+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050874 ID=TCONS_00050874|Name=TCONS_00050874|organism=Clytia hemisphaerica|type=transcript|length=7308bp|location=Sequence derived from alignment at scaffold_19:157615..164922+ (Clytia hemisphaerica)
cAAAGTGcagtaaaaaatcattgaataaaagaagaacttaaaatcttaaa
tattttcattttgaagaatagatgcaaaaaagtgaaacatagaaaagttt
catttttcattgcattaatcgaaatgggggatttggaaaattttctatgt
ttagttttttgcacaaacccctgtaactatgggcgagcaccccattgcta
agatgttggcttgaaatcaaaaatgaaaccactcaaaacgaaaataaaat
tggcccgtactcgaaatcccgtaatcttgatatacaagtttaagtctata
ctggcGAGTGGCGATGATACAAAGTGTGTGAATGAAATCAGTTGCGTGAA
GGCTTCGGGAGACAATGCGTACGCGGAGACGATAGAGCGTCACAAATTCA
TGCCGTTCAGAGCCATTGGTGAGTCATGTAttgatgtttttcataattgg
actgaaaaaaatagaaataatgaaaatttttagaataatgaaatttttta
cgCGGAAGCTCAAACACACGCGGACAGGTAACGGTAAACTAATACCTGAC
TTCCCTCACCTAATAAGAAAATAGATTCACtattagctttccaaaaattt
ataaCTTTTGTTCAGGTGATGTCTCATTAAAAAGTTATTACCATTCTCAT
AAAAGGtccatttttgaagaaatgCATGCATCCTACAGTGCGGGTTTATT
TCACGGAATGAAAGCGGAGTCTAAGGGTTTGTAAAAATTGTTAAGGTCAT
AGCATTTGTCAATATTGACATTTTAAAATGATGCTTTCGCTACTGAAAAT
ACGGAGATGCAGAATgggttaaagttctatttctaTTCTTTAATTGacat
aaactttacaaaaagcTATTCTCGGCAAAGTATGTTGGGTTGCCCATTTT
TTCTCGGAGAACAtacatagtttctaccccccctacatttaggggggggt
cttgggttttgatgaaccaaaagcaagggaggggtgttaaaagtatgaAA
TAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggtgtgaaattttaaatg
aatttcctaagggggggttagcacttaaggggggtcctcttacctaaggg
ggggggtcttgacccctctagaaactatggaCATATTTTCTCCAATCCAA
TCTACACAATTGTTACAAATTTTAGGCTGGatattttttagaattatttt
ataaacagacagttaaaaaaatatattaaggcgaaaatataaaaatgtag
tgtttccggaatgcgggtgaaggaaaaaagctctcatgcagccggccgga
aaaaactttttttttgcttttcttgataacttaagatcattaaaatagaa
ctttaaaaataacttttatgtacaaaaagtataaagtaagccctgaatac
taatgtatcaactattagcaaacaaaacttgatttacaagctggaatatc
taaccaaacgacgtttgatagcttgaacggtcaaccTGATTTTCTTTATG
ACTAACCATATAAATGAACCCATAGTTTGCAGCTGGgtcagaaaaaagtt
tttcttcacCCAGCTGGTTtctggaaacactacatttttttattttcgac
tAATAGTCAATATACAATAAAGTACAAGGATGAGTAGCAAAAGACCAGAG
CTTAAGGCTCCCCCAGAGGTGGTAAGCAAATTTGTTCATTATGTGCCAAG
CTTCTAATTTTATGCCAATGTTATGGGCCACATTTACACTCATTGTTTCA
AAAAGAAGCACACACTGTAAAGTTGtttttaaaatctaatacatcaattt
ctatttctatttctttattagCATGAAACTTTTTAGTTTTATTTCGCTAA
tggaacaaaaaaaataaataaatgaaaaaatattattaagtaATTTAAAG
ACTATAAAACAACTATATCAAGAAATTTCTAATCAGTTtgctcttgatga
atttttttagtTCTACAATGATGTCGAAGCAAGGAAATATACATCAAAGT
AGGTTTCAAACTTTTTACAAAGATTTGATTAAACTTTTTGAGATCAATTC
TCAATGTGTTGTTTTTTCATTAACAATAAAAGAGTTggtttttgtataaa
agttCATAAATTTTAAGCCTAACTCGCACTTTTGTTATAATTCTGTATGC
ATAGATTTTTaaacagaaaattttaaatattatattattatatgaaatat
cttttgaatacAAGCTAGTTTTGAAATGCTTTTGAGGAATTGCTATaata
ttttcaatgattttttaactTCAGTActcgaatgattgaaattcaaaatc
agATGACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCT
TGCTTCCTTTTGGATATTGGGTTTGTACtagttacacgcttttttttaat
aagaaacctTCACTTGGCTCCAAGCCTGGAGTACCTTATtttccagagaa
tttcagcATCAAAGATCCTTATCAAGTTCCTtctttacatagctgctaac
aTTGGATTTACTAAGTATGTAGCATATGTATAAGTATAACAATGGACTAA
AATACatcattaactttttttcttgttctcAGCCtgggcagttccttaac
aaCCCCTTAGTTTTCGAACTATTtgcagcctcaagttccttataaacata
TTCCTCATAAAAAAATGNGTTAGTTTTCAAACTATTtgcagcctcaagtt
ccttataaacatattcctcataaaaaaatgtgtgaTTGATTTTATAAGGG
TTGAACTATGATCATTATAAAATAAAGTTGGATATCACATGAAGTACTCT
AAATCAGCTTTTTAAAGCtgcaaagaaatttttttcctacaCATTTCTTG
ttcaaatctttctttattttcagtCACACAGCATCCAGTTTATCTGTTTT
TGATTAAATTAATGAacatgattttattatttttcaggtGTGGGTCAGGG
TTGAGTGGTGAGGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGA
TATCAGTAGTTCCATGTTGGGTATATTATTTTCACTCTTATCTTTCATGT
ATTTACACATTCATTAGCTTTGTTTAGTCCCTTTAATAATGTGTCTATAT
AAAGCATATTAATTTAAACCTTGAATAAATTTATAATAGAaaacaagaat
tttcaaaaaagattacTCATCCTAATTTGTAGATATTGCAAAGGAAAGAG
AAGTTGAAGGTGATTTATTGGAACTGGATGCTGGTATGGGAGTACCTTTC
CGGCCAGGAACATTTGATGGTTGCATCAGGTTTTTTATTGTCTTATCTCT
TTGTACTAGGGTGCAACTCCTCTCTTCAAAGTAAATTTTCTGGTGATCCT
TGAATTTTTAAGAGATGGATCCTTTGCAATGGCAAAAATCTTGGAAACCC
ACTCTCACAGCATTTGAAAAATAAGTATTgtgaaaacaaaattaaattca
tgCTTGATGCAGAGGGGAGATTTTCTACATATGAAGCTTTAAAGTGAGCT
CGATTGATTAAACAACATTTTCTTCCGTTTTCAGTATTTCAGCCCTTCAG
TGGCTTTGTAATGTTGACAAAAAATGGCATAATCCTGTAAAGAGATTACA
CTCATTTTTCACTACATTATACACAAGTCTTGTAAGTtatattgttttca
aattttttatcataataCTACATTATGAAGATAAACTAACTTTCTCTCCT
ATTGCAAGTAGAATAACGAAAGCATTCAGTGAGGaccttttttaaacatt
tgtttcccaggcatagccttcctggaaattattatctttttggaaacaga
tatctgtttcccaattcaTTATGTCATCTCCTAAAAATATTGacctgttt
ctctctgatgacatcatcagctggagcggggaaacagatagttttaaagg
aaaaagtTTTTCCTAGAAAAACGAATCAACAAAAAggtctctcctggaaa
agggaaacagatattttggGGAAATGGGCTTGTTGGCTGCTTCTGGAATA
AGTTATTATCTGGTTATATTCTTCTTATCAACTCaactttattttatatt
ataagtCTTCTTTTTGCTTTTAAGAAAAGAGGAGGCAAAGCCATTTTTCA
GTTCTATCCAGACAGTCCCAGTCAGGTAATATAATATTAAAATatatacc
aaaaaaataatgGTATAGCCAATTACAATTCTAAAGAGAATTGCTAAAAA
TGTCATAACATTCattttgacatttcaaaataataacattTCCTATCAGC
GTTTGTTACATTGCTTTGCCACATTTGTTTTAATTCTACTTTTATTCTAA
ACTGCACGTGATCCCTAATTCTACTCTTACTCTTAGGTAGAACTAATAAC
ATCACAAGCAATGCGTTCTGGTTTTTCTGGCGGTGTTGTTGTTGATTATC
CCAACAGTACAagagcaaaaaagtaaataattcTTTATCAGAATACTCTA
aggttcttttttataagagcaaagtctttaatttttataaatatttatgA
TTGCTCTTTACTTCTTGTTGAGTTGAGTTAAACTCTCATTCATCAGAAGA
GTGCTTGACCAATCGGAATCCGAAGCATATATATACTATTGTCGAATGAA
GTTAATGTGTTTTATTTCTAATTTATTGAATGTTTGTTAATGATTGTTCT
TTATAAATCAATATAGAGagtactagacggttcccgtcgtcgccaacgcc
ggttaacggttttgcttgcacatcaaaagcctttaaaatacgataatgtg
ggttaattcctgacatcgttttggcttaaaatgccgaatacaaTAATAAA
AATTATACTTCTAAACTTTCTACATTAGTCAAAAttttcccgtttgttgg
cttcacatgaggacagcttaagaccggcgcatatgcaatgcaaccaacat
tgaaacctttttaaataatgttacacaaagtttaatcatcaaacaacaat
gttggattttgttgcgtgtgttgatataaaataattcgaaatcgtgcaac
aaaaatgccacacctgacgtcgcagtactttttcatgaaattgatgtcag
aacttttttcgtttacaaatagcagtgtagagtcttctctaatccgagtt
ttctacgcttgtcaaacttagcgcgagactttttgtatcgaaggtggata
ggttttccagccgcgacgttcaaattttagaaaccttaacatatgttact
gggctagcgttacagacatttttcataaactcatttagtatagtaagatt
aTTTCTGTCAAAGTAAAGCTTACCACTAGACCTAAATTTCCTTCAGTCTG
ATGATTGCCCTCACTAAGTGAATAATTTCTGAATGATTTGCGTTcaactt
ttaattcttttttaatagTACTTTTACCTATGTGAGATGATGACAGTTTT
TGTCTTCCTTTTATTCCTTAGAATGTTTCTGGTTTTGTTTGCCGGAGTCA
GTAATGCTGTCTTACCTCAGGTATGCAATTATGCTTTTGtttatcaaaca
tttttttactGGCTGCTTGATAATGGGCTGTAACTATGAgttaaattcaa
aacattttaataATTTCTTGCCGTTCTTGcatattgattattttttgtgt
ttaGGCCTTGGGAACAGAAGGAGCTGGAAATACTGTATCTTATACAACAA
ATAGGTATGTAAGTCTTTCTatgatattttaaaatttattgtttttagaA
TATCGCCAAGTTTTGTACTAGGTATGTACCAATGTTCTACTTCTTTTATT
TAGAGAGAGAAATAATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaa
gtaaagaatggattcaaaagaagaaagatcGGAAACGTAGACAAGGGAAA
GAGTAAGAGATCACACTTTATTTGCTTATTGCTTTTTACCACACTCCCTT
NAAAAGAGTAAGAGATCACACTCTATTTGCTTATTGCTTTTTACCACACT
CCCTTGAACCATTTGCTAGTCTTTTGATAAGATGATATTCCTTGCATTGT
GACCAGAAATATCTGTCAATTGGAGATTTCTACCTTTAAGGTCCTGCCCT
GTATTTATTATTGAATTCAGAATGAAGAAataatattcttaaaattttcc
atttcagTGTTCGAGCTGATTCTAAGTATTCTggaagaaaaaggaaagtt
gCTTTTTGAGATTGGCTTACTTACAGTTGTCATATTGGGGCTTTGATCAA
CTGGTTTGAGTGGTGTATAGTTTCCAATCGATTGAGTTGGTGATGTGGTA
GAAATGCTCAGTGTGTACCTTTACACAATACCAACAATACTTATCAATAA
ATTCTTTGATAATTTAGGATTTCATTAGATTTggcaaaaactgatttttt
actaaaaatgaaatttcttacCATCATTATTTTATTGGAAActctatttt
tattcaaaattttgtttttatacaatGCCAAAGAAATTCATATCATCTTA
TACAAGATAATAtacaatttttgtaaacatgaCCAACACCTTGTGGGTGT
ATTTTGGTTTGTTCTGCTATTATAAGCCATGAAATTATCAAACATGTTCA
TTAATATCATCATAATATCACTAGCATAATAAACACTTTGTGGAGTAGAA
CAAggatagaaaattttttttcatagagtCTAGAGGTGCTGATGGATTCT
CCTTGGAAGACTGAAAATTTCTCCCTTTCAATTTCGACTGAAAATTCCTT
TTTGTGTACAGATAGTTTAACAAATTTCCATGACAACACATCACCAGGTG
TTGTACTTACCTGGTACAATAGTTTCTCttgaattttgtatttttttgag
aGGAAAAGATCTTTATAATACTGTTTATTGTGTCTCTCTCTGGCTCTACA
AATATTCCAATTTTTATTAAGATTGTCGTCTGTAGCTTGAAACCTGCCAT
TAGAGTTT

Coding sequence (CDS) from alignment at scaffold_19:157615..164922+

>TCONS_00050874 ID=TCONS_00050874|Name=TCONS_00050874|organism=Clytia hemisphaerica|type=CDS|length=10080bp|location=Sequence derived from alignment at scaffold_19:157615..164922+ (Clytia hemisphaerica)
ATGAGTAGCAAAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGtTCTACAA
TGATGTCGAAGCAAGGAAATATACATCAAATActcgaatgattgaaattc
aaaatcagATGACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGAT
GAACCTTGCTTCCTTTTGGATATTGGgtGTGGGTCAGGGTTGAGTGGTGA
GGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTT
CCATGTTGGATATTGCAAAGGAAAGAGAAGTTGAAGGTGATTTATTGGAA
CTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAACATTTGATGGTTG
CATCAGTATTTCAGCCCTTCAGTGGCTTTGTAATGTTGACAAAAAATGGC
ATAATCCTGTAAAGAGATTACACTCATTTTTCACTACATTATACACAAGT
CTTAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAGACAGTCCCAG
TCAGGTAGAACTAATAACATCACAAGCAATGCGTTCTGGTTTTTCTGGCG
GTGTTGTTGTTGATTATCCCAACAGTACAagagcaaaaaaAATGTTTCTG
GTTTTGTTTGCCGGAGTCAGTAATGCTGTCTTACCTCAGGCCTTGGGAAC
AGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGAGAGAGAAATA
ATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaaagaatggatt
caaaagaagaaagatcGGAAACGTAGACAAGGGAAAGATGTTCGAGCTGA
TTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGAATGAGTAGCA
AAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGtTCTACAATGATGTCGAA
GCAAGGAAATATACATCAAATActcgaatgattgaaattcaaaatcagAT
GACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGCT
TCCTTTTGGATATTGGgtGTGGGTCAGGGTTGAGTGGTGAGGTATTGACA
GAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTTCCATGTTGGA
TATTGCAAAGGAAAGAGAAGTTGAAGGTGATTTATTGGAACTGGATGCTG
GTATGGGAGTACCTTTCCGGCCAGGAACATTTGATGGTTGCATCAGTATT
TCAGCCCTTCAGTGGCTTTGTAATGTTGACAAAAAATGGCATAATCCTGT
AAAGAGATTACACTCATTTTTCACTACATTATACACAAGTCTTAAAAGAG
GAGGCAAAGCCATTTTTCAGTTCTATCCAGACAGTCCCAGTCAGGTAGAA
CTAATAACATCACAAGCAATGCGTTCTGGTTTTTCTGGCGGTGTTGTTGT
TGATTATCCCAACAGTACAagagcaaaaaaAATGTTTCTGGTTTTGTTTG
CCGGAGTCAGTAATGCTGTCTTACCTCAGGCCTTGGGAACAGAAGGAGCT
GGAAATACTGTATCTTATACAACAAATAGAGAGAGAAATAATAACAGAAA
TGGTAGAGGGAAACCAtcaaagaaaagtaaagaatggattcaaaagaaga
aagatcGGAAACGTAGACAAGGGAAAGATGTTCGAGCTGATTCTAAGTAT
TCTggaagaaaaaggaaagttgCTTTTTGAATGAGTAGCAAAAGACCAGA
GCTTAAGGCTCCCCCAGAGGTGtTCTACAATGATGTCGAAGCAAGGAAAT
ATACATCAAATActcgaatgattgaaattcaaaatcagATGACTTTGAGA
GCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGCTTCCTTTTGGA
TATTGGgtGTGGGTCAGGGTTGAGTGGTGAGGTATTGACAGAGCAAGGAC
ATTATTGGGTTGGATTTGATATCAGTAGTTCCATGTTGGATATTGCAAAG
GAAAGAGAAGTTGAAGGTGATTTATTGGAACTGGATGCTGGTATGGGAGT
ACCTTTCCGGCCAGGAACATTTGATGGTTGCATCAGTATTTCAGCCCTTC
AGTGGCTTTGTAATGTTGACAAAAAATGGCATAATCCTGTAAAGAGATTA
CACTCATTTTTCACTACATTATACACAAGTCTTAAAAGAGGAGGCAAAGC
CATTTTTCAGTTCTATCCAGACAGTCCCAGTCAGGTAGAACTAATAACAT
CACAAGCAATGCGTTCTGGTTTTTCTGGCGGTGTTGTTGTTGATTATCCC
AACAGTACAagagcaaaaaaAATGTTTCTGGTTTTGTTTGCCGGAGTCAG
TAATGCTGTCTTACCTCAGGCCTTGGGAACAGAAGGAGCTGGAAATACTG
TATCTTATACAACAAATAGAGAGAGAAATAATAACAGAAATGGTAGAGGG
AAACCAtcaaagaaaagtaaagaatggattcaaaagaagaaagatcGGAA
ACGTAGACAAGGGAAAGATGTTCGAGCTGATTCTAAGTATTCTggaagaa
aaaggaaagttgCTTTTTGAATGAGTAGCAAAAGACCAGAGCTTAAGGCT
CCCCCAGAGGTGtTCTACAATGATGTCGAAGCAAGGAAATATACATCAAA
TActcgaatgattgaaattcaaaatcagATGACTTTGAGAGCCTTGGAAT
TGTTGGCCCTACCAGAAGATGAACCTTGCTTCCTTTTGGATATTGGgtGT
GGGTCAGGGTTGAGTGGTGAGGTATTGACAGAGCAAGGACATTATTGGGT
TGGATTTGATATCAGTAGTTCCATGTTGGATATTGCAAAGGAAAGAGAAG
TTGAAGGTGATTTATTGGAACTGGATGCTGGTATGGGAGTACCTTTCCGG
CCAGGAACATTTGATGGTTGCATCAGTATTTCAGCCCTTCAGTGGCTTTG
TAATGTTGACAAAAAATGGCATAATCCTGTAAAGAGATTACACTCATTTT
TCACTACATTATACACAAGTCTTAAAAGAGGAGGCAAAGCCATTTTTCAG
TTCTATCCAGACAGTCCCAGTCAGGTAGAACTAATAACATCACAAGCAAT
GCGTTCTGGTTTTTCTGGCGGTGTTGTTGTTGATTATCCCAACAGTACAa
gagcaaaaaaAATGTTTCTGGTTTTGTTTGCCGGAGTCAGTAATGCTGTC
TTACCTCAGGCCTTGGGAACAGAAGGAGCTGGAAATACTGTATCTTATAC
AACAAATAGAGAGAGAAATAATAACAGAAATGGTAGAGGGAAACCAtcaa
agaaaagtaaagaatggattcaaaagaagaaagatcGGAAACGTAGACAA
GGGAAAGATGTTCGAGCTGATTCTAAGTATTCTggaagaaaaaggaaagt
tgCTTTTTGAATGAGTAGCAAAAGACCAGAGCTTAAGGCTCCCCCAGAGG
TGtTCTACAATGATGTCGAAGCAAGGAAATATACATCAAATActcgaatg
attgaaattcaaaatcagATGACTTTGAGAGCCTTGGAATTGTTGGCCCT
ACCAGAAGATGAACCTTGCTTCCTTTTGGATATTGGgtGTGGGTCAGGGT
TGAGTGGTGAGGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGAT
ATCAGTAGTTCCATGTTGGATATTGCAAAGGAAAGAGAAGTTGAAGGTGA
TTTATTGGAACTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAACAT
TTGATGGTTGCATCAGTATTTCAGCCCTTCAGTGGCTTTGTAATGTTGAC
AAAAAATGGCATAATCCTGTAAAGAGATTACACTCATTTTTCACTACATT
ATACACAAGTCTTAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAG
ACAGTCCCAGTCAGGTAGAACTAATAACATCACAAGCAATGCGTTCTGGT
TTTTCTGGCGGTGTTGTTGTTGATTATCCCAACAGTACAagagcaaaaaa
AATGTTTCTGGTTTTGTTTGCCGGAGTCAGTAATGCTGTCTTACCTCAGG
CCTTGGGAACAGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGA
GAGAGAAATAATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaa
agaatggattcaaaagaagaaagatcGGAAACGTAGACAAGGGAAAGATG
TTCGAGCTGATTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGA
ATGAGTAGCAAAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGtTCTACAA
TGATGTCGAAGCAAGGAAATATACATCAAATActcgaatgattgaaattc
aaaatcagATGACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGAT
GAACCTTGCTTCCTTTTGGATATTGGgtGTGGGTCAGGGTTGAGTGGTGA
GGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTT
CCATGTTGGATATTGCAAAGGAAAGAGAAGTTGAAGGTGATTTATTGGAA
CTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAACATTTGATGGTTG
CATCAGTATTTCAGCCCTTCAGTGGCTTTGTAATGTTGACAAAAAATGGC
ATAATCCTGTAAAGAGATTACACTCATTTTTCACTACATTATACACAAGT
CTTAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAGACAGTCCCAG
TCAGGTAGAACTAATAACATCACAAGCAATGCGTTCTGGTTTTTCTGGCG
GTGTTGTTGTTGATTATCCCAACAGTACAagagcaaaaaaAATGTTTCTG
GTTTTGTTTGCCGGAGTCAGTAATGCTGTCTTACCTCAGGCCTTGGGAAC
AGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGAGAGAGAAATA
ATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaaagaatggatt
caaaagaagaaagatcGGAAACGTAGACAAGGGAAAGATGTTCGAGCTGA
TTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGAATGAGTAGCA
AAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGtTCTACAATGATGTCGAA
GCAAGGAAATATACATCAAATActcgaatgattgaaattcaaaatcagAT
GACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGCT
TCCTTTTGGATATTGGgtGTGGGTCAGGGTTGAGTGGTGAGGTATTGACA
GAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTTCCATGTTGGA
TATTGCAAAGGAAAGAGAAGTTGAAGGTGATTTATTGGAACTGGATGCTG
GTATGGGAGTACCTTTCCGGCCAGGAACATTTGATGGTTGCATCAGTATT
TCAGCCCTTCAGTGGCTTTGTAATGTTGACAAAAAATGGCATAATCCTGT
AAAGAGATTACACTCATTTTTCACTACATTATACACAAGTCTTAAAAGAG
GAGGCAAAGCCATTTTTCAGTTCTATCCAGACAGTCCCAGTCAGGTAGAA
CTAATAACATCACAAGCAATGCGTTCTGGTTTTTCTGGCGGTGTTGTTGT
TGATTATCCCAACAGTACAagagcaaaaaaAATGTTTCTGGTTTTGTTTG
CCGGAGTCAGTAATGCTGTCTTACCTCAGGCCTTGGGAACAGAAGGAGCT
GGAAATACTGTATCTTATACAACAAATAGAGAGAGAAATAATAACAGAAA
TGGTAGAGGGAAACCAtcaaagaaaagtaaagaatggattcaaaagaaga
aagatcGGAAACGTAGACAAGGGAAAGATGTTCGAGCTGATTCTAAGTAT
TCTggaagaaaaaggaaagttgCTTTTTGAATGAGTAGCAAAAGACCAGA
GCTTAAGGCTCCCCCAGAGGTGtTCTACAATGATGTCGAAGCAAGGAAAT
ATACATCAAATActcgaatgattgaaattcaaaatcagATGACTTTGAGA
GCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGCTTCCTTTTGGA
TATTGGgtGTGGGTCAGGGTTGAGTGGTGAGGTATTGACAGAGCAAGGAC
ATTATTGGGTTGGATTTGATATCAGTAGTTCCATGTTGGATATTGCAAAG
GAAAGAGAAGTTGAAGGTGATTTATTGGAACTGGATGCTGGTATGGGAGT
ACCTTTCCGGCCAGGAACATTTGATGGTTGCATCAGTATTTCAGCCCTTC
AGTGGCTTTGTAATGTTGACAAAAAATGGCATAATCCTGTAAAGAGATTA
CACTCATTTTTCACTACATTATACACAAGTCTTAAAAGAGGAGGCAAAGC
CATTTTTCAGTTCTATCCAGACAGTCCCAGTCAGGTAGAACTAATAACAT
CACAAGCAATGCGTTCTGGTTTTTCTGGCGGTGTTGTTGTTGATTATCCC
AACAGTACAagagcaaaaaaAATGTTTCTGGTTTTGTTTGCCGGAGTCAG
TAATGCTGTCTTACCTCAGGCCTTGGGAACAGAAGGAGCTGGAAATACTG
TATCTTATACAACAAATAGAGAGAGAAATAATAACAGAAATGGTAGAGGG
AAACCAtcaaagaaaagtaaagaatggattcaaaagaagaaagatcGGAA
ACGTAGACAAGGGAAAGATGTTCGAGCTGATTCTAAGTATTCTggaagaa
aaaggaaagttgCTTTTTGAATGAGTAGCAAAAGACCAGAGCTTAAGGCT
CCCCCAGAGGTGtTCTACAATGATGTCGAAGCAAGGAAATATACATCAAA
TActcgaatgattgaaattcaaaatcagATGACTTTGAGAGCCTTGGAAT
TGTTGGCCCTACCAGAAGATGAACCTTGCTTCCTTTTGGATATTGGgtGT
GGGTCAGGGTTGAGTGGTGAGGTATTGACAGAGCAAGGACATTATTGGGT
TGGATTTGATATCAGTAGTTCCATGTTGGATATTGCAAAGGAAAGAGAAG
TTGAAGGTGATTTATTGGAACTGGATGCTGGTATGGGAGTACCTTTCCGG
CCAGGAACATTTGATGGTTGCATCAGTATTTCAGCCCTTCAGTGGCTTTG
TAATGTTGACAAAAAATGGCATAATCCTGTAAAGAGATTACACTCATTTT
TCACTACATTATACACAAGTCTTAAAAGAGGAGGCAAAGCCATTTTTCAG
TTCTATCCAGACAGTCCCAGTCAGGTAGAACTAATAACATCACAAGCAAT
GCGTTCTGGTTTTTCTGGCGGTGTTGTTGTTGATTATCCCAACAGTACAa
gagcaaaaaaAATGTTTCTGGTTTTGTTTGCCGGAGTCAGTAATGCTGTC
TTACCTCAGGCCTTGGGAACAGAAGGAGCTGGAAATACTGTATCTTATAC
AACAAATAGAGAGAGAAATAATAACAGAAATGGTAGAGGGAAACCAtcaa
agaaaagtaaagaatggattcaaaagaagaaagatcGGAAACGTAGACAA
GGGAAAGATGTTCGAGCTGATTCTAAGTATTCTggaagaaaaaggaaagt
tgCTTTTTGAATGAGTAGCAAAAGACCAGAGCTTAAGGCTCCCCCAGAGG
TGtTCTACAATGATGTCGAAGCAAGGAAATATACATCAAATActcgaatg
attgaaattcaaaatcagATGACTTTGAGAGCCTTGGAATTGTTGGCCCT
ACCAGAAGATGAACCTTGCTTCCTTTTGGATATTGGgtGTGGGTCAGGGT
TGAGTGGTGAGGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGAT
ATCAGTAGTTCCATGTTGGATATTGCAAAGGAAAGAGAAGTTGAAGGTGA
TTTATTGGAACTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAACAT
TTGATGGTTGCATCAGTATTTCAGCCCTTCAGTGGCTTTGTAATGTTGAC
AAAAAATGGCATAATCCTGTAAAGAGATTACACTCATTTTTCACTACATT
ATACACAAGTCTTAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAG
ACAGTCCCAGTCAGGTAGAACTAATAACATCACAAGCAATGCGTTCTGGT
TTTTCTGGCGGTGTTGTTGTTGATTATCCCAACAGTACAagagcaaaaaa
AATGTTTCTGGTTTTGTTTGCCGGAGTCAGTAATGCTGTCTTACCTCAGG
CCTTGGGAACAGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGA
GAGAGAAATAATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaa
agaatggattcaaaagaagaaagatcGGAAACGTAGACAAGGGAAAGATG
TTCGAGCTGATTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGA
ATGAGTAGCAAAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGtTCTACAA
TGATGTCGAAGCAAGGAAATATACATCAAATActcgaatgattgaaattc
aaaatcagATGACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGAT
GAACCTTGCTTCCTTTTGGATATTGGgtGTGGGTCAGGGTTGAGTGGTGA
GGTATTGACAGAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTT
CCATGTTGGATATTGCAAAGGAAAGAGAAGTTGAAGGTGATTTATTGGAA
CTGGATGCTGGTATGGGAGTACCTTTCCGGCCAGGAACATTTGATGGTTG
CATCAGTATTTCAGCCCTTCAGTGGCTTTGTAATGTTGACAAAAAATGGC
ATAATCCTGTAAAGAGATTACACTCATTTTTCACTACATTATACACAAGT
CTTAAAAGAGGAGGCAAAGCCATTTTTCAGTTCTATCCAGACAGTCCCAG
TCAGGTAGAACTAATAACATCACAAGCAATGCGTTCTGGTTTTTCTGGCG
GTGTTGTTGTTGATTATCCCAACAGTACAagagcaaaaaaAATGTTTCTG
GTTTTGTTTGCCGGAGTCAGTAATGCTGTCTTACCTCAGGCCTTGGGAAC
AGAAGGAGCTGGAAATACTGTATCTTATACAACAAATAGAGAGAGAAATA
ATAACAGAAATGGTAGAGGGAAACCAtcaaagaaaagtaaagaatggatt
caaaagaagaaagatcGGAAACGTAGACAAGGGAAAGATGTTCGAGCTGA
TTCTAAGTATTCTggaagaaaaaggaaagttgCTTTTTGAATGAGTAGCA
AAAGACCAGAGCTTAAGGCTCCCCCAGAGGTGtTCTACAATGATGTCGAA
GCAAGGAAATATACATCAAATActcgaatgattgaaattcaaaatcagAT
GACTTTGAGAGCCTTGGAATTGTTGGCCCTACCAGAAGATGAACCTTGCT
TCCTTTTGGATATTGGgtGTGGGTCAGGGTTGAGTGGTGAGGTATTGACA
GAGCAAGGACATTATTGGGTTGGATTTGATATCAGTAGTTCCATGTTGGA
TATTGCAAAGGAAAGAGAAGTTGAAGGTGATTTATTGGAACTGGATGCTG
GTATGGGAGTACCTTTCCGGCCAGGAACATTTGATGGTTGCATCAGTATT
TCAGCCCTTCAGTGGCTTTGTAATGTTGACAAAAAATGGCATAATCCTGT
AAAGAGATTACACTCATTTTTCACTACATTATACACAAGTCTTAAAAGAG
GAGGCAAAGCCATTTTTCAGTTCTATCCAGACAGTCCCAGTCAGGTAGAA
CTAATAACATCACAAGCAATGCGTTCTGGTTTTTCTGGCGGTGTTGTTGT
TGATTATCCCAACAGTACAagagcaaaaaaAATGTTTCTGGTTTTGTTTG
CCGGAGTCAGTAATGCTGTCTTACCTCAGGCCTTGGGAACAGAAGGAGCT
GGAAATACTGTATCTTATACAACAAATAGAGAGAGAAATAATAACAGAAA
TGGTAGAGGGAAACCAtcaaagaaaagtaaagaatggattcaaaagaaga
aagatcGGAAACGTAGACAAGGGAAAGATGTTCGAGCTGATTCTAAGTAT
TCTggaagaaaaaggaaagttgCTTTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032241XLOC_032241Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050874-exon-scaffold_19-1491911889:157615..158032TCONS_00050874-exon-scaffold_19-1491911889:157615..158032Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:157615..158032TCONS_00050874-exon-scaffold_19-1510915933:157615..158032Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:157615..158032TCONS_00050874-exon-scaffold_19-1575043694:157615..158032Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:159621..159685TCONS_00050874-exon-scaffold_19-1491911889:159621..159685Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:159621..159685TCONS_00050874-exon-scaffold_19-1510915933:159621..159685Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:159621..159685TCONS_00050874-exon-scaffold_19-1575043694:159621..159685Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:159975..160012TCONS_00050874-exon-scaffold_19-1491911889:159975..160012Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:159975..160012TCONS_00050874-exon-scaffold_19-1510915933:159975..160012Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:159975..160012TCONS_00050874-exon-scaffold_19-1575043694:159975..160012Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:160289..160384TCONS_00050874-exon-scaffold_19-1491911889:160289..160384Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:160289..160384TCONS_00050874-exon-scaffold_19-1510915933:160289..160384Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:160289..160384TCONS_00050874-exon-scaffold_19-1575043694:160289..160384Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:160952..161034TCONS_00050874-exon-scaffold_19-1491911889:160952..161034Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:160952..161034TCONS_00050874-exon-scaffold_19-1510915933:160952..161034Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:160952..161034TCONS_00050874-exon-scaffold_19-1575043694:160952..161034Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:161197..161293TCONS_00050874-exon-scaffold_19-1491911889:161197..161293Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:161197..161293TCONS_00050874-exon-scaffold_19-1510915933:161197..161293Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:161197..161293TCONS_00050874-exon-scaffold_19-1575043694:161197..161293Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:161549..161645TCONS_00050874-exon-scaffold_19-1491911889:161549..161645Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:161549..161645TCONS_00050874-exon-scaffold_19-1510915933:161549..161645Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:161549..161645TCONS_00050874-exon-scaffold_19-1575043694:161549..161645Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:162089..162139TCONS_00050874-exon-scaffold_19-1491911889:162089..162139Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:162089..162139TCONS_00050874-exon-scaffold_19-1510915933:162089..162139Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:162089..162139TCONS_00050874-exon-scaffold_19-1575043694:162089..162139Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:162351..162436TCONS_00050874-exon-scaffold_19-1491911889:162351..162436Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:162351..162436TCONS_00050874-exon-scaffold_19-1510915933:162351..162436Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:162351..162436TCONS_00050874-exon-scaffold_19-1575043694:162351..162436Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:163436..163484TCONS_00050874-exon-scaffold_19-1491911889:163436..163484Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:163436..163484TCONS_00050874-exon-scaffold_19-1510915933:163436..163484Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:163436..163484TCONS_00050874-exon-scaffold_19-1575043694:163436..163484Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:163619..163668TCONS_00050874-exon-scaffold_19-1491911889:163619..163668Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:163619..163668TCONS_00050874-exon-scaffold_19-1510915933:163619..163668Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:163619..163668TCONS_00050874-exon-scaffold_19-1575043694:163619..163668Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:163768..163866TCONS_00050874-exon-scaffold_19-1491911889:163768..163866Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:163768..163866TCONS_00050874-exon-scaffold_19-1510915933:163768..163866Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:163768..163866TCONS_00050874-exon-scaffold_19-1575043694:163768..163866Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1491911889:164122..164922TCONS_00050874-exon-scaffold_19-1491911889:164122..164922Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1510915933:164122..164922TCONS_00050874-exon-scaffold_19-1510915933:164122..164922Clytia hemisphaericaexon
TCONS_00050874-exon-scaffold_19-1575043694:164122..164922TCONS_00050874-exon-scaffold_19-1575043694:164122..164922Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050874-proteinTCONS_00050874-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:157615..164922 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.2723	15.1345	9.43018	9.58707	16.2879	14.5943	11.7302	16.6012	5.50755	5.82456	6.53585	5.79696	5.59984	8.26914	5.90918	7.3157	7.22549	7.36289	5.59898	4.07453	8.26819	5.88757	6.45263	7.32505	16.2194	16.4008	7.21173	8.01496	4.83101	7.27888
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR022238Unchr_MeTrfase_Williams-Beuren
IPR013216Methyltransf_11
IPR029063SAM-dependent_MTases
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0008168 methyltransferase activity
Blast
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BLAST of TCONS_00050874 vs. Swiss-Prot (Human)
Match: BUD23 (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Homo sapiens GN=BUD23 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 2.639e-83
Identity = 131/212 (61.79%), Postives = 170/212 (80.19%), Query Frame = 1 
Query:  451 KRPELKAPPEVFYNDVEARKYTSNTRMIEIQNQMTXXXXXXXXXXXXXXCFLLDIGCGSGLSGEVLTEQGHYWVGFDISSSMLDIAKEREVEGDLLELDAGMGVPFRPGTFDGCISISALQWLCNVDKKWHNPVKRLHSFFTTLYTSLKRGGKAIFQFYPDSPSQVELITSQAMRSGFSGGVVVDYPNSTRAKKMFLVLFAGVSNAVLPQAL 1086
            +RPE   PPE+FY++ EARKY  N+RMI+IQ +M  RALELL LPE++PC+LLDIGCG+GLSG  L+++GHYWVG DIS +MLD A +RE+EGDLL  D G G+PF+PGTFDGCISISA+QWLCN +KK  NP KRL+ FF +L++ L RG +A+ Q YP++  Q+ELIT+QA ++GFSGG+VVDYPNS +AKK +L LF+G S   +P+ L
Sbjct:    6 RRPEHGGPPELFYDETEARKYVRNSRMIDIQTRMAGRALELLYLPENKPCYLLDIGCGTGLSGSYLSDEGHYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGPS-TFIPEGL 216
The following BLAST results are available for this feature:
BLAST of TCONS_00050874 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BUD232.639e-8361.79Probable 18S rRNA (guanine-N(7))-methyltransferase... [more]
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