TCONS_00050922 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00050922
Unique Name	TCONS_00050922
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	868

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_19:596396..606299-
coding sequence from alignment at scaffold_19:596396..606299-

transcript sequence

>TCONS_00050922 ID=TCONS_00050922|Name=TCONS_00050922|organism=Clytia hemisphaerica|type=transcript|length=868bp
aaaaaaagacATTGCTAAAATGTAACATAATCAAAACTGATCAAAACAAA
CTCTTTTAAATACAAACTAATACAGCATCGGTTAGTTGTAACTCCGTGGA
CAATGAGATTTTTACAAGGCATCATCGCTCTCACTCTATTGACAGCCTTA
GTCAGTTGTAACACAGAGGAAAAAGATcaagaaaaagcaaaagaagCTTT
GAATAAATTATTGAAACAAGGGCCATTAGGACACCTAATAGGCGACGGTT
CACAAACTTGTTTGATATGCGAGTTCATTGTAGGAGAGTTGATGTACCAA
CTAGAATCAAATACTGTCAAAaCAGAAGTTCTACCAGCTCTTGAGGAGAA
GATTTGCCAACTGTTATTTCCTTCAAATGGTCTAAAGAAACGAGTTGTGA
CCTCTGGGtgcGAAGATGTTGCTGACTTACTATTAAAAGCTTTGCTAAAA
GTGTTAGATGACGACATCAAACCGACACAAGTTTGCCAGAAACTCACCAT
ATGTAAAAAAGATGAACTTGTCTTTGCAAAGAAACGTCATTGAAAGGGTA
AAACACCGACTTTGGATTGAAAATCTTCTGACAAACGAGATCTCATGACA
GCTTGTGATATGATATCGAtctatttttggtcattttttggaaaaatttt
cccttcCAAAAATTTATGACTGGATGATTATTCTTTGTAagaattataaa
tttatttagattaagattttaatttttatttgaaaatttaggTTACAATG
TTCACgaaataatttttcaacaattttataACTATATTTAGATAACGGAT
TTcatagattttaatttttaaatctcCTTAATATTTTTGTAGACAAACGG
AATTTCCTACCAAATTTG

Run BLAST on NCBI

protein sequence of TCONS_00050922-protein

>TCONS_00050922-protein ID=TCONS_00050922-protein|Name=TCONS_00050922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=146bp
MRFLQGIIALTLLTALVSCNTEEKDQEKAKEALNKLLKQGPLGHLIGDGS
QTCLICEFIVGELMYQLESNTVKTEVLPALEEKICQLLFPSNGLKKRVVT
SGCEDVADLLLKALLKVLDDDIKPTQVCQKLTICKKDELVFAKKRH

Run BLAST on NCBI

transcript from alignment at scaffold_19:596396..606299-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00050922 ID=TCONS_00050922|Name=TCONS_00050922|organism=Clytia hemisphaerica|type=transcript|length=9904bp|location=Sequence derived from alignment at scaffold_19:596396..606299- (Clytia hemisphaerica)
AAAAAAAGACATTGCTAAAATGTAACATAATCAAAACTGATCAAAACAAA
CTCTTTTAAATACAAACTAATACAGGTATGTTTTTCTCCGTTTCAATTTT
TGCACTTTTTTGACAGTTTTAAGGAGATAGATAATCATTATTGCTAGATT
TCAGTGACATTATTTCAAATATATACTTCTCATGGTCGCATTTTGAACCT
CCTTCGTCACACCCTGTGTCACAGACCCGCATGGAAACTTTGGCCAAAAT
GTCGTCCCCGTTTGGCAGAAATACCCTACAATTTCAGCCAGGCTTGAATA
CAAACTTTGAATTCGAACCCAATCAAAATTTAATGTAAAAAATTACACTC
CAAAACCTTCCCCACTGGATGTTTAACTTAGGAACGATCAAATTTTTATC
CCATTGGGATCTCGCTATGGGAAAAAGTTTTACCGGGGTTGTGAGACAGG
AGTGTTTTGTCCCTGCCAGGGGCTGGGCAGCTTTCTCCAGTCAAATGTTT
AGCAAAAATTACTGCCAGTAAGAAACATGCTCTGAGATCTCATTCTCAAG
GGGAAATTGCTTTGAGCTCTCATACCTATTAAGTAAAACTCTCGTTATTT
AAGGAACCCTTACTTGAATGTTATATTAAAATGACATATCATATTAATTA
TAGCAAAGAACTTTTAATCCAAATTCATTTATCCCCAACGGTTACTGAAA
CAGGGGTATTTCTGATATATATATTTTGCTACAAGGACAAATAACCCATG
ACACTTCTGGCTCTTAAATCTTTACATTGTATATTCCCCCTATATTCCTC
AATAACATTTTAAGGATAAAACTTCACAACGACACAAGAGTAGCTTTAAC
AGTGAGAATTCCAAGAAAGCTCGAGGCTTAAATCTGTTTTAAATCATTAG
GAAATTCCTTTCATGTTTCAATTTTATGATAATTTAGTTATTTTTATTGC
TTTGATCTCTTTAGCATCGGTTTGTTGTAACTCCGTGGACAATGAGATTT
TTGCAAGGCATCATCGCTCTCACTCTATTGACAGGTTGAGTTTATCATTT
CTTAATTTTTCTTTTGAACTGAAGTCTCTTTTTCCTCTCAATGACACGTT
GTTTCTTTATAAGAACATAAGATTGCCAAAACATTAAGAACAAGTTTCAT
CAAGATGTGCAGACTTCTTAGCATAAAAAATATGAACATTTTTAGGCTTA
AACCTCAAAAGTTTAACAGCATCCGAAGGCTTAAAAAAGGTTGGACTTCC
TTAGAGAGAGATTAGGGAAAATTCATTAAGTGGTGGAAATTTGTTTGGGA
TGTAAGAAAAGTGTTTACGCAGTGAAAATTCCAGGAAACCTCTTAGCCTA
AATCCCTTTTAAATCATTACAAAATTAAAGTCTGTCAAAATAATTTGCAG
CTGAGACAATCAAAAGGTATCACACTTTCATGTTTCAACTCTATTTTTGA
TACTTAAACACCCCCTTCTCACAGACCCACTGGGAACCCTTCCCATTGGA
AAAATCGGCCTAAATATCGTCCCCGGTCGAAAATTATCCTCCTTTAGCCC
CCACTAAAAATAATCAAATAAACCAATCCTCCCTGCAAAATATTATGCAA
TTCTTCCCAACCCTACTGAATTTACTGACTTGAAAACAAAAGAATTGGAA
TCCCCAGCCATAGAAATTACGGGATCCCCATCGAGTTTCTGTCTGTTTTT
TTTTATCTCCACTTGCTGAAAAAATCCTACCGGGTCCGTGAGAAGGGGAT
GTACTTAAGTACAACCTTGTTTCACAGACCCGCTGTTGGGAAAAAGTTCG
ACCGATGCTGTAAGACACCCCTGTTTAAGTGACTTTTATCGTTTTGGTCA
TTTCAGCCTTGGTCAGCTGTAACACAGTGGAAAAAGATCAACAAGAAGCA
AAGGAAGCTTTGAATAAATTATTGAAACAAGGTATTTGCTTGGATATTGA
TGTTATAAAGAAAGATAGGCTTTTCTATGGGAATCATTTCACATGTATAT
TGCCAAATATTACTTTGGTTGATTTGATTTCGAGCTTTGTGAAATAATTA
TTAAGCTTCTGACCTGAAACGTTAAGTGAAATTTTCTTAAATGAAAACGT
TGACTTATATATTTTAGATTTTGAAATTGAATTTATATCGGATTTTGAAT
TTCAAAGTCTTTGAAATTAATTCATCGAGAACGTCACTTTGATTTAGGGG
TATCTACTGTAGAGGTGGTACCAATGTATTAAAGGGTTAAGATATATATT
AATACCTAGGAACATGGAGTCTAGCCTATTTCATGTGGTTATATCCCCTG
TACCCTGTTTCATTGAATGAGAATGATTAATTATGAATTAAGTATGAATT
GTTTGCATATTTAATTCTTTCAGGGCCATTAGGACACCTAATAGGCGACG
GGTCGCAAACTTGTTTGATATGCGAGTTCATTGTAGGAGAATTGATGTAC
CAACTAGAATCAAATACTGTCAAAGTGAGTACAATTTTACAAAAATGTAC
GGTAGAAACCTTTTTTTCTGTCTTGAAGGGCTTGAAAAATGTTACTTAAA
TTTAGCTAACTAGTGCTCAGCAATCGACCAGAATATTTATTTTCGCACTA
TTTTACTCACTTTTCCGCCGAGCCACTTGGCCTGTTAATCTTAAACATTT
TTTGATCGATCAGTGAAATGTCCATTTGGAGCTAAGCCCAATCGGGAAAA
CGCCTGGTCGGGGAAAACGTTCGGCAGCATATTTGAAACTTTATCAATAT
TAATTTTCTCCATTCATGCGAAAAGTATTACAAATAACGTAATCAGGAAT
CATCTTTCGAGTGATTATTTCGGTCACAGGCCTTTTTCAAAATTTATTCA
TATAGAAGTTTGTAAATGTTTCGATATATAGGGAGCCTCATTATATAACA
ATTAAGAAGAAAACAGTAGAATAATTTCATGTCTTCAGACGATCATCAAC
TGCAATATGTGAAAACTTGATTTATACGAATCTAATTTTTATCAAATTAT
AGACAGAAGTTCTACCAGCTATCGAAGAGAAGATTTGCCAACTGTTATTT
CCTTCAAATGGTCTAAAGAAACGGGTCGTGACTTCTGGGGTAAGTTTAAT
AAATCCGTCTGCTACTTAATTTAAGGCTAACCAAAACTTCTTCTTTGCTA
CAATGTGGAAACCATCCTCAAGGCCATTGGTCTAATAACCTAACATGGTT
TACAGATTGCAGCAAAAGAAAGTAAATTCGCTTTAAAGCGAATGGACTTG
AGCTTGTGAGAATTCCCTTTTGGAAAAAAGTGCAAGAACTAATGTTGCGG
AAAGGTATGCTATTCGGTAGCTTTGATTATTTTTTGCATAAAATAGATAA
GTAAATTAGGTTTAAATTTTAAATATAATTATTTTAGAATGTAATGAAAA
ATAATAAAAAAATGAAATTTATAGCTAACAGTAACCTGCAGTCGAATAAC
TGTAGTAGATTATCAAGGATAGGAGAACTTTATGTTATTTTTTAATGTAT
GTCATAAGATTAAAATTAATTTTTTTTCAATTAATTCTTCTTGGGCCAAT
CAAGAAGAGAATGCTCAACATTTAAAAAGACTCAAGATTTTAATGAAAAC
CATCATTTAGGAAATATATACCCTTACTGCTTAGAAATTTCTTTTATGGA
AGCTGTTAACAAAAGAAGAGAAAAGGGTCAATTAACCTCGTGACATACCT
TAATGTGAACTGCATTACAGCTTCTCACAAAAATAGAAAATCTTTACCAT
TGGAAACCCACCAGTATTTTGAAAACGTGGTTTTAGTGACTCTAACCAAC
TTTATAAACATTATGTTTTTTTTTAACTTTTTTGTGGCAATGTTAGCGGA
TTTCGAGAAATAAATTTTGAAATTAGATTAATATTCTCACAAGTCAGGAC
TATGAGAAAAATATTTTCTCTTTTAAAATAAACTTATAACCTGAGAACCT
AGAGACTTCGATCTAAATTTGACAATGCATTAGACAAAAACACGGAAAAT
CGACTACGCAAAAATCACAACCTCTTTACTCAGCAGTAACTTTCCCCACT
TTTTCACCAATGAGTTTATTTATGTTGGCTTGTACCATCCCGTTTTGATT
CTGTTGAATATATCTATTAGAATATTTAATAGGATTCGTAGAAAGGGGGG
GGGACAAAATTTGTGTAGGAGAGCATATTTTATGACACTGTTATCATCTA
TTCATAATATAATTACAGTGTCATAGAATAAGTCTGCCCTCCTACACAGA
TTTTTCACCCCTCCTGTCTACGGTACTGGATTCGGGCATCTTTTTGCATC
TTTTTCGTAAAATGCACAGATCTGTGCAGATTTCCCGCGACAAGAATTTT
TGTCATTTGTTCAATTGACTTGGAAATTCATGAGCTCTTTTCTATTCCCA
TTTCCTTTGTAAATTTTAACCCAAATGCGCAAGAGAGTGTTCAACCATAA
ATAAGATGAACACATAGGAATCACACCCTTCAGAAATTCTGCACTTAGTG
AACATTATTTCTACACCTGTGTCGGGTTGAATCTGTAATTTGAGTGGTCA
ATAGAGCATCCCAAGTCAATAGAGCAATCCTACTGTACATAATTAATAAG
AAATCAATATTTTAGGGAATTTCCATCAGCCCCGCAAAAACCCCGCCCGA
TTCTTTTTTGATATTTTTAATCCTTTTAATGACCTCTGTCACCCGCTTTT
TATTTGAAATTGATATCTCATGCAATAATTTTTCATTGAAAAATTAAACA
AAAAGAGTTATTTTTTTCTATTAGTGCGAAGATGTTGCTGACTTACTATT
AAAAAACCATTACCAGCTGATAACTTCAAATAAAAGAGTACGAAAGAGAT
TCCGAATAGTGAATTCATTATCATAATCTTGATCAGAAAATTGACAACGA
ATTGNCCCCTATATTCCTCAATAACATTTTAAGGATAAAACTTCACAACG
ACACAAGAGTAGCTTTAACAGAATTCCAAGAAAGCTCTAGGCTTAAATCA
ATTTTAAAGGAAATTCCTTTCATGTTTCAATTTTATGATAATTTAGTTAT
TTTTATTGCTTTGATCTCTTTAGCATCGGTTAGTTGTAACTCCGTGGACA
ATGAGATTTTTACAAGGCATCATCGCTCTCACTCTATTGACAGGTTGAGT
TTATCATTTCTTAAATTTTTTTTTTGAACTGAAGCCTCTTTTTCCTCTCA
ATAACACGTTGTTTCTTTATAAGAACATAAGATTGACAAAACATTAAGAA
CAAGTTTCATCAAGATTTGTAGACTTCTTAGCATAAAAAATATGAACATT
TTTAGGCTTAAACCTCAAAAGTTTAACAGCACCCGAAGGCTTCAAAAAGG
TTGGACTTCCTTAGAGAGAGATTAGGGAAAACTCATTAAGTGGTGGATAT
TTGTTTGGGATGTAAGAAAAGTTAATACGCAGTGAAAATTCCAGGAAACC
TCTTCGCCTGAATCCCTTTTAAATCATTACAAAATTAAATTCTGTCTCAA
AATAATTTGCAGCTGAGACAATCAAAAGATATCACACTTTCATGTTTCAA
CAACTAGTTTTTGATACTTAAACACCCCCTTTTCACAGACCCACTGGGAA
CCTTTCCCATTGGAAAAATTGGCCTAAATATCGTCCCCGGTGGAAATTAT
CCTCCTCTAGCCCCCACCGAAAATAATCAGATAAACCATCCTCCCTGCAA
ATTATTATGCAATTCTTCCCAGCCCAACTGAATTTTCTGACTTAAAAACA
AAAGAATTTTAATCCCAGCCGTAGAAATTATGGAATCCCCATCGAGTTTC
TGTCTGTTTTTTTTTATCTCCACTGGCTGAAAAAATCTTACCGGGTCCGT
GAGAAGGGGGTGTACTTAAGTACAACCCTGTTTAACAGACCCGCTGTGGG
GAAAAAGTTCGACCGATGCTGTAAGACGGGTGTTTAAGTGATTTTTATCG
TTTTGATCTTTTTTAGCCTTAGTCAGTTGTAACACAGAGGAAAAAGATCA
AGAAAAAGCAAAAGAAGCTTTGAATAAATTATTGAAACAAGGTATTTGCT
TGGATATTGGATGTTATAAAGAACGATAGGCTTTTCTAGGGGAATAATTT
CATTCTTCACTGTTCAACTCTCTAGGACCTGGTGACCATATATTACTTTG
GTTGATTTCGAACTTTGTGAAAAAATAAATAAGCTTCTGACCTGAAACTT
TAAGCAAAAGCTTCTTAAACAAAAACGCTGACTTTAACCTTTCAAAAGCG
GGCGTCAGTATTTAAGATTTTGGGATTGAATATATCGAATTTTGAATTTT
AAAGTCTTTGAAATTAGGGATATCCGAAATTAGTTTATCGATGCCTAAGG
GCATTGATTAAAAAGGAATTTTGTTTGACATCAAAGAGCATCGATCAAGG
TGAATCAGTCCAGGAGTCCTCAGCGAACTGTTTTTTCAAACATAAAAGAC
GATTAAAATGGGAGTGACCTTAATACTCTAAGATCTTGAATATCTCATGG
CGTGTACCTAGGGCTCGGCTAACTCGAAAAATCCATCTTCCTAATAATGG
GGTCACAATTAGCCCTAAACATAGCCTATTTCATGTAAATATATCCGCTT
ACCCTGTTTCATTGAATGAGAATGATTGATTATGAATTAAGGTATGAATT
GGTTGCATATTTAATTCTTTCAGGGCCATTAGGACACCTAATAGGCGACG
GTTCACAAACTTGTTTGATATGCGAGTTCATTGTAGGAGAGTTGATGTAC
CAACTAGAATCAAATACTGTCAAAGTGAGTACAGTTTTACAAAAATGTAC
GATAGAAACCTTATTTTCTGTTTTGAATGGTCTTGAAAAATGTTACTTAA
ATTTAGCTGCTTAGTGCTCGGCAATAGACAATTTATTTTCACCCCATTTT
ACTCCTTTTTCCAGAGGGCCACTTGGTCTGTTGATCTTAAATATCTTTTG
ATCGATCAGGGAAATATCCCTTTGAAGCAAAGCCCGATCGGGAAAACGCC
TGGTCGGGGAAAACGTCCGGTAGCATATTTATAACTCTATCCATATCAAT
TTTCTCCGTTCATGCGAAAAGTATTCCAAATAACGTAATCAGGAATCATC
TTTCGAGTGATTATTTAGGTCACAGGCCTTTTTCAAACTTTATTCATATC
GAAGTTTGTAAATGTTTCGATATATAGGGAGCCTCATTGGACATAACAGT
TATGAAGAAAACAGTAGAACGGTTTCATGCCTTTAGACAATCATCAGCTA
CAATATGTGAAAACTTGTTTTAAACAATTCTAATTTTTATCAAATTTTAG
ACAGAAGTTCTACCAGCTCTTGAGGAGAAGATTTGCCAACTGTTATTTCC
TTCAAATGGTCTAAAGAAACGAGTTGTGACCTCTGGGGTAAGTATAGTAA
TTCCGTCTTCTACTTAATTTAAGGTTAATCAAAACTTCTTTGCTACCACG
AGGAAACCATCCTCAAGACGTTGGCCGATAAGGTATGAGAAAAATTCTCT
TAACACAACTTATAACCTAAGAACCTAGAGACTTCGATCTAAATTTGACA
ATGCATAAGGCAAAAACGCTTTAAAATCGACTACGTAAAAATCACACCCT
CTTTACTCAGCAACTTTACCCACTTATAATACACCCTGTGTCACAGACCC
ATTGGGACCCCAGCCCTACTAGAAATTTCGTCCCTGGTGAAAAAGTGCCC
AGGAATTTCAGCCCCACTAGGAAATTGACTTTCATTTCATCCCACCCGAA
AATTCGATTTCTAAAAAGTGCACTCAAAAACTATTCCCACTGGATTTTTT
AACCTTGGAACAATAGAATTTCTATCCTATTGGGATTTTAGTAGGAATAT
TTATCGGCTTGCATACGTAATTTGAGTCGATTCTCAAGTCTACAAAGCAA
TCAAAATCAATATTTTACACCAGCCCCGCAAAAAAACACGCCTTTTTCGA
ATTTTTCTCGATATTTTTAATCGTACTAATGACCTCTGTCACCCAGTTTT
TATTTGAAATTGAAATCTTCTGCAATGATTTTTCATTGATTACGTTAAAA
AAAAGAAAAATTAAACAAAAAAGAGTTATTTTTTTCTTTTAGTGCGAAGA
TGTTGCTGACTTACTATTAAAAGCTTTGCTAAAAGTGTTAGATGACGACA
TCAAACCGACACAAGTTTGCCAGAAACTCACCATATGTAAAAAGTAAGTC
TTTATCATCCATGACACTCGATTTAGACATTTTCCTCCGACATGCCCTAT
AACTCTGAAGGTCGGAAAAATTACTTGTGTTTCTAAAGGGTCCCGAAACA
TAGAAAATATCGAACCTAATTCATTATATAAATTACGTAACGTTTTCTAC
AGAAACCTCTGTTTTTTTTGTTAGTAGTTGCAGATTTCACACAACATTTA
TATTTCGCTTAAATTTGCCACTTCTGGTTAAAACCACGGTGCCTCTGTAG
AATACTTAACGTCATGAATAAAGACATCATCGTGCCCGATTCTATTATCG
TCATGGTAGAATAAAGAGTCCCCCTAACTCAAACCAAGGTTATATCTACC
TTTACATTCCAATTCAAAGCTCTCTCTATAGAGCCCAGGGAAGGGGTACT
TAGGTGAAATAGGTGTCAGGTATGTATAAGCCATAAGGGTCCCATTTTCA
CAACCTCGAAAGTCTCACAGAGGGGTACAAAAACCATTTAAAAGAAAATT
GAGTCTCTGTAAAGGTCCAAAATTCATGAAAATTTCCTCTTTCTTTGCTC
GGATATACCCGTCAACTCGCAAACCTAGTAGCCCCCCCCCCCCCGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGTACTAGG
GTTGGCGAATGAGGGGTATGTACGGACGGGACCTCCGAAAGCCGACCCTA
AGAGAGACTAATTTTTGCTGAAAAGGTGACCCTTAGAGAGACTGATTTTT
GCTGAAGAGGTGACCCTTAGAGAGACTGATTTTTGTTGAAAAGGTGACCC
TTAGAGAGACTTTTTGAATTCTATTTTCGATTTTTGAAAAAAGTCATACC
CTTAGAGAGACTTTATTACAATTTTTCTATGGAAATCAAAAAATTTCCTA
AAAATCCTGAATTTTCCGACCCTTAGAGAGACTAATTTAAAACTTTCTGA
TTTTTCCGACCCTTAAAGAGACTTTGAAAGGTGAAAAAAACCGACCCTTA
TCGTCCGCACATACCCATCATCCATTTTTGCCTAAGTACCCCGGGCTTTT
GGTGATCCGTGAATAAACTACGTTCTTTTTTTTGTTCTCTTTCAGAGATG
AACTTGTCTTTGCAAAGAAACGTCATTGAAAGGGTAAAACACCGACTTTG
GATTGAAAATCTTCTGACAAACGAGATCTCATGACAGCTTGTGATATGAT
ATCGATCTATTTTTGGTCATTTTTTGGAAAAATTTTCCCTTCCAAAAATT
TATGACTGGATGATTATTCTTTGTAAGAATTATAAATTTATTTAGATTAA
GATTTTAATTTTTATTTGAAAATTTAGGTTACAATGTTCACGAAATAATT
TTTCAACAATTTTATAACTATATTTAGATAACGGATTTCATAGATTTTAA
TTTTTAAATCTCCTTAATATTTTTGTAGACAAACGGAATTTCCTACCAAA
TTTG

Coding sequence (CDS) from alignment at scaffold_19:596396..606299-

>TCONS_00050922 ID=TCONS_00050922|Name=TCONS_00050922|organism=Clytia hemisphaerica|type=CDS|length=2646bp|location=Sequence derived from alignment at scaffold_19:596396..606299- (Clytia hemisphaerica)
AGATGAACTTGTCTTTGCAAAGAAACGTCATTGATGCGAAGATGTTGCTG
ACTTACTATTAAAAGCTTTGCTAAAAGTGTTAGATGACGACATCAAACCG
ACACAAGTTTGCCAGAAACTCACCATATGTAAAAAACAGAAGTTCTACCA
GCTCTTGAGGAGAAGATTTGCCAACTGTTATTTCCTTCAAATGGTCTAAA
GAAACGAGTTGTGACCTCTGGGGGCCATTAGGACACCTAATAGGCGACGG
TTCACAAACTTGTTTGATATGCGAGTTCATTGTAGGAGAGTTGATGTACC
AACTAGAATCAAATACTGTCAAACCTTAGTCAGTTGTAACACAGAGGAAA
AAGATCAAGAAAAAGCAAAAGAAGCTTTGAATAAATTATTGAAACAAGAT
GAGATTTTTACAAGGCATCATCGCTCTCACTCTATTGACAGAGATGAACT
TGTCTTTGCAAAGAAACGTCATTGATGCGAAGATGTTGCTGACTTACTAT
TAAAAGCTTTGCTAAAAGTGTTAGATGACGACATCAAACCGACACAAGTT
TGCCAGAAACTCACCATATGTAAAAAACAGAAGTTCTACCAGCTCTTGAG
GAGAAGATTTGCCAACTGTTATTTCCTTCAAATGGTCTAAAGAAACGAGT
TGTGACCTCTGGGGGCCATTAGGACACCTAATAGGCGACGGTTCACAAAC
TTGTTTGATATGCGAGTTCATTGTAGGAGAGTTGATGTACCAACTAGAAT
CAAATACTGTCAAACCTTAGTCAGTTGTAACACAGAGGAAAAAGATCAAG
AAAAAGCAAAAGAAGCTTTGAATAAATTATTGAAACAAGATGAGATTTTT
ACAAGGCATCATCGCTCTCACTCTATTGACAGAGATGAACTTGTCTTTGC
AAAGAAACGTCATTGATGCGAAGATGTTGCTGACTTACTATTAAAAGCTT
TGCTAAAAGTGTTAGATGACGACATCAAACCGACACAAGTTTGCCAGAAA
CTCACCATATGTAAAAAACAGAAGTTCTACCAGCTCTTGAGGAGAAGATT
TGCCAACTGTTATTTCCTTCAAATGGTCTAAAGAAACGAGTTGTGACCTC
TGGGGGCCATTAGGACACCTAATAGGCGACGGTTCACAAACTTGTTTGAT
ATGCGAGTTCATTGTAGGAGAGTTGATGTACCAACTAGAATCAAATACTG
TCAAACCTTAGTCAGTTGTAACACAGAGGAAAAAGATCAAGAAAAAGCAA
AAGAAGCTTTGAATAAATTATTGAAACAAGATGAGATTTTTACAAGGCAT
CATCGCTCTCACTCTATTGACAGAGATGAACTTGTCTTTGCAAAGAAACG
TCATTGATGCGAAGATGTTGCTGACTTACTATTAAAAGCTTTGCTAAAAG
TGTTAGATGACGACATCAAACCGACACAAGTTTGCCAGAAACTCACCATA
TGTAAAAAACAGAAGTTCTACCAGCTCTTGAGGAGAAGATTTGCCAACTG
TTATTTCCTTCAAATGGTCTAAAGAAACGAGTTGTGACCTCTGGGGGCCA
TTAGGACACCTAATAGGCGACGGTTCACAAACTTGTTTGATATGCGAGTT
CATTGTAGGAGAGTTGATGTACCAACTAGAATCAAATACTGTCAAACCTT
AGTCAGTTGTAACACAGAGGAAAAAGATCAAGAAAAAGCAAAAGAAGCTT
TGAATAAATTATTGAAACAAGATGAGATTTTTACAAGGCATCATCGCTCT
CACTCTATTGACAGAGATGAACTTGTCTTTGCAAAGAAACGTCATTGATG
CGAAGATGTTGCTGACTTACTATTAAAAGCTTTGCTAAAAGTGTTAGATG
ACGACATCAAACCGACACAAGTTTGCCAGAAACTCACCATATGTAAAAAA
CAGAAGTTCTACCAGCTCTTGAGGAGAAGATTTGCCAACTGTTATTTCCT
TCAAATGGTCTAAAGAAACGAGTTGTGACCTCTGGGGGCCATTAGGACAC
CTAATAGGCGACGGTTCACAAACTTGTTTGATATGCGAGTTCATTGTAGG
AGAGTTGATGTACCAACTAGAATCAAATACTGTCAAACCTTAGTCAGTTG
TAACACAGAGGAAAAAGATCAAGAAAAAGCAAAAGAAGCTTTGAATAAAT
TATTGAAACAAGATGAGATTTTTACAAGGCATCATCGCTCTCACTCTATT
GACAGAGATGAACTTGTCTTTGCAAAGAAACGTCATTGATGCGAAGATGT
TGCTGACTTACTATTAAAAGCTTTGCTAAAAGTGTTAGATGACGACATCA
AACCGACACAAGTTTGCCAGAAACTCACCATATGTAAAAAACAGAAGTTC
TACCAGCTCTTGAGGAGAAGATTTGCCAACTGTTATTTCCTTCAAATGGT
CTAAAGAAACGAGTTGTGACCTCTGGGGGCCATTAGGACACCTAATAGGC
GACGGTTCACAAACTTGTTTGATATGCGAGTTCATTGTAGGAGAGTTGAT
GTACCAACTAGAATCAAATACTGTCAAACCTTAGTCAGTTGTAACACAGA
GGAAAAAGATCAAGAAAAAGCAAAAGAAGCTTTGAATAAATTATTGAAAC
AAGATGAGATTTTTACAAGGCATCATCGCTCTCACTCTATTGACAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_032268	XLOC_032268	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00050922-protein	TCONS_00050922-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_19	supercontig	scaffold_19:596396..606299 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0609556	0	0	0	0	0.371318	9.65943	6.29213	11.5499	9.54084	22.1566	25.5229	31.3126	37.3222	27.4963	28.379	23.251	16.4268	51.9856	53.8701	63.4201	63.5501	52.6376	45.4735	31.8585	40.2483	299.493	248.253

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR008139	SaposinB_dom
IPR007856	SapB_1
IPR011001	Saposin-like

Vocabulary: **Biological Process**
Term	Definition
GO:0006629	lipid metabolic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00050922 vs. Swiss-Prot (Human)

BLAST of TCONS_00050922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00050922 (transcript) - C. hemisphaerica