TCONS_00051733 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051733
Unique NameTCONS_00051733
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2278

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051733 ID=TCONS_00051733|Name=TCONS_00051733|organism=Clytia hemisphaerica|type=transcript|length=2278bp
GTAAgccaaaatatcaaaacaaagttctcAGCtgagaaaaattattgaag
taaCAAGTTTGCAGTGTTTTGCTATAACTTACTTTAAAAGTTGATATCAT
TTCAGAGATATATGGAGACATTGAATGAATATGGAACAGtctgatttgaa
aactttttgcaatGCCCTCCATGAGAAATTCTCCTCTCAATATGACTTTG
ATAATTTGGATAACATAATTGTCAGATCGCTTAACTGTCCGCAACAATCT
TTGGATAAGAGGAAAATCATAGGACTCGATCATTGCAGCATCAAAAATGC
TGGAAATTATGATGACATCGCCAACTCGTGCCCCATGGTTCAAGAGTTAG
ATGTTTCCTCAAACTACTTCGAAGATTGGAGCGAAATAATTAACATCACA
AAATGTTTGAGACATTTGACCTGTTTGAATGTTTCACACAACCCACTGGA
TAGGGATACTTTGCTTCAACATGACCACAACTTGTCAACACCTCAAAAGT
CCATCCACAGTTTAGTCATCAATAACACTGGCATCGATTTCCAATCTCTT
CTTAAACTACTTGATATCTACCCAAGTGTTGCCGTGCTTCACTTCTGCAT
CAATGATATTTCTTCCATCCCCGGAAACCTGAACAAACAGTATGAAAATG
TTACCACTGTCTCTATGGCAAAAAATAACATCAAGACATGGGCTGATATc
cgaaaaattggaaaactttTCCCGAATCTCGTTTCTTTGAATATCAGTGA
AAATTTATTCAAAGAaattaaatatgaaaaaaatagcaATGACTTTTGTC
ATTTGAAGAACTTGAACATTATGGAGTGCCCCATCGATGATTGGGAATCT
ATTGAGAATCTCCAACATCTGCCACAGTTAAGAGAGTTACGAATTAAAGG
CTGTCCTATTTACGCAAAGAAATCGTTGACCGAGAAACAACAACGTTGTT
TGACGGTTGCTAGGTTACCGAATGTTACCAAATTAAACGGGAGTAACGTA
GAGGACGAAGAACGTGAGGACGCGGAGAGGCTGTTCATCAGGTTTCATAT
GAAAGGTGAAAACAAGCCCACTCGTTATCAAGATCTTATACAAACATACG
GAAAGTTAGACGAATTGGCTGAAGTGAATTTTGATAGAAGTTTCATTGTC
AATGTTCTGGTAAAAGGAGACGTGGAATCACCTTTCCTCTATTCCTTGGA
TTGCTCTCAAACTGTTCGCTCTTTGTATAAGGAACTTGGCACGCGattga
aattgaagaagaatAAGTTCAATTTGGTTCATTTTGAGCAGGAGGAAGAA
GAAAACGATAGTACATATGTTGGCCGTAAGATGAAGAAATCAAATGTGCA
GCGCGTGACAAGCTATTATGTTCGTGAAGGAGATTCTGTGCAAGTCATTC
GTCTTGATCTCGACATTGATTGAACtttctaaaaatgaaaaagttttctt
cCGTTTACTTTCGATTATATTATTCTCATATTATCCTCTTTCAATTATGA
ATTATCCTTGCGTATcgaatttttgcaatatttatcATATCTTGTATATA
TTCATTGTAGTGGTAGCATCGCTCTCAACCTTCTCAACCCTTATCACGTC
CTTTactattgaatattattatatcCGATTGAAGTTCCaatctaaaatta
atttttcattgtaAATATTGTGAGGGTAGAAAGTGAAGAGCTCAGTGAGG
CAGAGATGTGTACCTGTTTGATCCAGACAGAGAATATCATTTATTTGATC
GCTTTGTTTTGGAAACAGACGACcgttttaactttttgtgtttaatttgt
ttttatggTGATTTGTTCTATATTGTTCCTTCCTTTAATTTGGCTCGAAT
CGAGTTAGTATTGTATTTTTGTGGACTAACCACTGTGAAACACAAAACGC
TAAGATGCAATGATCAGTTGCCCTTCCTGGTGCTTTCCATATTGGTGTTG
ATTATGATTATGAGATGTTTCCAGCTATGTTTTGTTAACGATTGATTATC
AGGTGCTTAATTTTTCGTATTTGTCTTGTAAATAACCGTAGTATTTTTGA
TGAACTTTATTTTATGTAAATATTTATTTCTAATGCGCAGTATTTTATAC
AATATCCTTTTTCAACAGGACACGCATGATGCTTCGTTAATCTTGGTATT
TTCAACTTACCCAAAGACCCGGTGGAACCaatacccactggaaaatttta
tttgaaaacttcAATAAGCTCAAATCCCTACTGAGTATGATACTAAAAAT
TTGAGTATGCACATTGCATTTTTAATAT
Run BLAST on NCBI

protein sequence of TCONS_00051733-protein

>TCONS_00051733-protein ID=TCONS_00051733-protein|Name=TCONS_00051733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=432bp
MNMEQSDLKTFCNALHEKFSSQYDFDNLDNIIVRSLNCPQQSLDKRKIIG
LDHCSIKNAGNYDDIANSCPMVQELDVSSNYFEDWSEIINITKCLRHLTC
LNVSHNPLDRDTLLQHDHNLSTPQKSIHSLVINNTGIDFQSLLKLLDIYP
SVAVLHFCINDISSIPGNLNKQYENVTTVSMAKNNIKTWADIRKIGKLFP
NLVSLNISENLFKEIKYEKNSNDFCHLKNLNIMECPIDDWESIENLQHLP
QLRELRIKGCPIYAKKSLTEKQQRCLTVARLPNVTKLNGSNVEDEEREDA
ERLFIRFHMKGENKPTRYQDLIQTYGKLDELAEVNFDRSFIVNVLVKGDV
ESPFLYSLDCSQTVRSLYKELGTRLKLKKNKFNLVHFEQEEEENDSTYVG
RKMKKSNVQRVTSYYVREGDSVQVIRLDLDID
Run BLAST on NCBI

transcript from alignment at scaffold_203:113582..122656-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051733 ID=TCONS_00051733|Name=TCONS_00051733|organism=Clytia hemisphaerica|type=transcript|length=9075bp|location=Sequence derived from alignment at scaffold_203:113582..122656- (Clytia hemisphaerica)
GTAAGCCAAAATATCAAAACAAAGTTCTCAGCTGAGAAAAATTATTGAAG
TAACAAGTTTGCAGTGTTTTGCTATAACTTACTTTAAAAGTTGATATCAT
TTCAGAGATATATGGAGACATTGAATGAATATGGAACAGTCTGATTTGAA
AACTTTTTGCAATGCCCTCCATGAGAAATTCTCCTCTCAATATGACTTTG
ATAATTTGGATAACATAATTGTCAGATGTGAGTAGCTATACTTTATTCTA
TTCTTTTTCTTTTTATATTTGAAACATTTCTGAGTGAAATGTTAGAGTGC
GATTGTCAATTGAATTTATCAAAGGTTGCTTTGTGTTTTTACTTTTCTTT
GGGGTAAAAAATTCTTTCGGCCTGAACATTTGATCGTTGTGATATTTTAA
ATTCATCTAAGTTCTGGGATAAATTTATTACACTTTTCAACTTATTCAGT
TAGACATATCTGCATAAAAAAGTCCATTCTCCAGCTTTGCTAAAACGCAG
TCGTCTAAGAAAACAGCTATTTTTTTTAGAATCTTCCTTACAATCTAGTT
TTTCTATTCATAAAAAGTAGATTGCTGACGAGTGGAAAGGAATTTCAGCA
TGACTGATCCTTTTGTTACGATAATAACATCAAAGCGGGAATTAATTTTC
TTCTCGATTCTTTCTTTCCTTTTCCTTTCTTATCAGTTCATGCTTACTCT
CACTACTTTCAAAGCGTGGTTAGCTCAAGCGGTTAGAATGTCTGTCTCAT
ATGCATGGGGCTCCGAGTTCGATTCCAATGGATGTCCAATTTTTTCAATA
TACTAAAAGATATTTGACTTGTATTAATGTTGACTGCTCCAACTTGGGAC
GATTGGTGGAAACATGGGACTGAATTGCATATCTGGTCTGTATTTTCACT
CACTGTAAAATCGAAAGAGAAATCGTGTATTTTTAAACACGCCGTCCATT
AACTCTTTNGAACAAAGGCAAAGAATTTAAAATTAGTGAGAATAAAAACA
TGGGTGGAGGCTAACCTAAACTTGCAACAAAATAGGAAGTTTCATTAGCT
TCATGCAAAATAAAAACGTAAANACACGCCGTCCATTAACTCTTTTTAAG
CTGCAATCCTTACACAATGGTCCCATTCCAGTGTCTTTTAATGACTTAAC
ACCTAATTGGTTGGTTCTTATCAAACAATGAAACGATAAAATTTTCCCAA
AAGCCGTGAATTTGTAGATTTAAGGATGCTCTTCCCTTTGAAATAATAAA
CATTTGTTTAGGGACATTCTTCATTGTTGACCCCTATCTATCTATCTAAA
TATTTAAGTAGTAACAAAACATATATGTTCGTTCTCCCTACATATAAAAA
CATTTAACAAAAAAAAAATATATAAATGAAAATGAANAAATAAATCACTA
AAAGTTAGAAATGCTAGAAATTATACTAGAAATTACTCCTTGTGTTAAGT
AAGAGTTAATTGGAAAAGGCTTCAAGAACATAAATTGATGCTGACCTGGG
AATTAGTGTTAAACGAGCTTGAACTAGGGCTAAGGCAACCTGGTGTTAGT
GATTAATGAAACACAAGAGAGCCTGATACACATGGAAAAAAAATACCATG
TACGATCTAGTTTCTGTCAAAATAAGACGAAATCTCGATTTTAAATTCAC
TCCTATTTTCAATATTCAATACTTCTTTTGGTAACTCATTCCACCATTTA
ACAGTTATGGGCAGAAAAGAATCTCTGTATGCTATTACTCTGCCNTAGTT
TCTGTCAAAATAAGACGAAATTTCGATTTTAAATTCATTTCTATTTTCAA
TATTCAATACTTCTTTTGGCAACTCATTCCACCATTTAACAGTTATGGAC
AGAAAAGAATCTCTATATGCTATTACTCTTCCGTGTATTGGCTGGTATTT
AACACTATCACGAACTTGTTTTGGGAGAATACTCTGCATTTCCAACTTTC
CCGATCTTATGTCATGAAATACAGCTACAGAATCAACTTTTCTTTGGTGT
TCCAAAGTTTTCCATTTTAGATCATTCAACATTCTAGTAGGACTAGCATC
CCATGACCAATTCGAGAAAACAAAGCGGGCTCCTTTACGTTGGACCATTT
CAAGATTACCACATAAGGTTTGGCTCGATACTGGGTTCCATACTGGAGAT
GCATAGGACAGGATAAGTCTAACATATGTATTGAATGCTTTCGCTTTGAT
TTTACGTGAACAATTCCTCAGGTTCCTTTGAAGAAAAGATCTCTTTTGAT
TTGCCTTTTTGCATATTGTGTCAATATGAGTGTTCCACTTGAGCTTATTG
TTCAGGGTTACTCCAAGGTATTTGGCGTTAGATACTTTCTCAAGCTCTGT
TTGATGGATAGAATATGTGCTTTCTATGGGTTTGGTTTTCTTTGTAATTG
GGAGATGTTTGCACTTTTGAGGATAAAATTCCATATCCCATAGTGTCTCC
CACCCCTGTCTTATATACTACAATAACTTTGTGCAATGCCAACATACCTT
GTCCAATTCCTATGGCTGAATTAGACAAGGCATGTCGACATTACACAAAG
CTACGATGAGATTACGACAAGGTCTTAGTACGCTATGGTCAAACGAGACT
GTATCAGCAGAAATCAGATATTAGAAATTTTGCAATTTTGCAATAAACTG
CTGACATAGAAAAAACTTTTTTCCTCTTTTTAAGTTTGCTTCTTTGGTCC
AGATTTCATGATCCTAGCAAAAGCCAAACTAGAGCTGAAGTCAGCATTTT
TTAGTTTTTCCTTATTACACTTCTTTTATAAGAACCAGTAAAACTTTGCT
GAGGCTTGGCTGCTTTTATTTTTTGGCACTCTGAGCTTATTTATAGGATG
TGGTTGAGGTATTTTAGGAGATATTACCAATTTTTACTACTTTGACCCCA
AAAGTGCTTGGTTGAAGTTGAGTAATTTCAGGCCCCGGAGGGATATGTGC
TTGCCCTTAAGGGTGCCTTTTTGGGACCTTAAAGTTCCTGCAAAGGTTGG
AAAAACCAGAAAATTAAATTTCAGTCCCACTAAGGGTCCGAAAAATAGGA
AAATTTCTACTTTTTGCTTCTCGAAAAATGAAAATTAAGTCAAATGACGG
GTATGTTTTATTAGTCCCAATTAGGGTCGTAAAAATCGCAAGATTTTCCT
ATTTTTTCTCCTTTTTAGTCCCGCTAAGGGTCAGAGGGCCGAAAGTTGGA
CGGCACATACCTGTCAGCTTGCAACCCTAGTACCCCCAGGTTTCAGGCTC
ATCATTGTTCTTAAAATGTTCTTATTTTTTTGCGATTCTGAGCCTCATTG
TTCTTACAATATTGTTCTTATAGAAGAAATAAAATATATCTTTTTTGCCT
GAAAAAAAAAATGATTACAATACAGCCATTTCTGCAATCTACATGTCAAT
ACACTTTTTTCATTTATAAGTTGACATGTTTTAATGGGTGCTACAGGGTT
GCAATGTTGTGTTCATCTGTCAGTAATGTCTGGAATTAGGTAAAAGTGTG
GAGTTTGGAATGTTAAGTTAATGAAAATCTTACTAATGGATAAATTGTCC
CAAAAATGTTGGGTATTAATTATGGCGCGCCAAAAGGCTTTTTAATACCA
ACTTTTTTTTTTTGGTACCAACTTTTTTTTTTGATACCAACTTTTTTTTT
TTTGGTACCAACTTTTTTTTTTGATACCAACTTTTTTTTTAAACCAACTT
TTTTTTTTGATACCAACTTTTTTTTTAAACCAACTTTTTTTTTTGATACC
AACTTTTTTTTTAAACCAACTTTTTTTTTTGATACCAACTTTTTTTTTAA
ACCAACTTTTTTTTTTGATACCAACTTTTTTTTTAAACCAACTTTTTTTT
TTGATACCAACTTTTTTTTTAAACCAACTTTTTTTTTTGATACCAACTTT
TTTTTTAAACCAACTTTTTTTTTTGATACCAACTTTTTTTTTAAACCAAC
TTTTTTTTTTGATACCAACTTTTTTTTTAAACCAACTTTTTTTTTTGATA
CCAACTTTTTTTTTAAACCAACTTTTTTTTTTGATACCAACTTTTTTTTT
AAACCAACTTTTTTTTTTGATACCAACTTTTTTTTTAAACCAACTTTTTT
TTTTGATACCAACTTTTTTTTTAAACCAACTTTTTTTTTTGATACCAACT
TTTTTTTTAAACCAACTTTTTTTTTTGATACCAACTTTTTTTTTTGGATA
CCAACATTTTTTTATACCAACTTTTTTTTTTTACGAACTTTTTTTTTGAT
ATCAATGTTTTGTACAATACCAAATTTTGCCTCGATGTTTAATTGTTCAA
GTGTAGAAGGGCCCTTAAATTTTTTTCCGGGGAAATAAAGTCGGTCGAAA
CTTGATAAGTGGAATAAGTTAAGGCAAGACACGGGAGAAGATAGACTAGG
TATTAGTCGGTTTTTATAAAATATAGCTAGGAAGATAACCACGGATCGAA
AATCGTTAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTCT
TCCTTCGCCCGTACTCTCCTCCCATGCCACCCCTTTAAATAAATCTCGGG
AATTTCTCAATCTTCTTTTAAAAATTTACAGGCTAGTTTACTAGTCTAGA
TAAGAGAGTAGCGTGACAGAGAAGCCACAAAAACCACAACAACAAGATCA
CATTACATTCCAACCACAGTACAAACATATATAACAGGCAGGAGAACTAG
GAAGAAAGGAGGAACCACGCTCGATTTGAAAGCAGCGAGCGTGGATTTTT
GTGCATGCGCGCATTATTGAAGCCCCATCTACATCACACAAAAGAAAATA
GGAGTAAACGAAACAATAATATTGATGTTATAAAACAAGGTTAGTATTAC
GTCCGTATTACGCCAGTAATACGTCAGTATTATGTCGATATAATTTCGGT
ATTATAAAAATAAATTGGCATTGTAAAAAAAGTTGCTTTCAAAAATAAAA
AAGTTGGTATTAAAAAAAAAAGTTGGTATTAAAAAAAAAAAGTTGGTATT
AAAAAAAAAAAGTTGGTATCAAAAAAAAAAGTTGGTATCAAAAAAAAAGT
TGGTATCAAAAAAAAAAGTTGGTATCAAAAAAAAAAGTTGGTATCAAAAA
AAAAAGTTGGTATTAAAAAGCCTTTTGGCGCGCCATAATTAATTACCGAA
ATGACATTTTTAGCTAAAAAATCTGGAAAAATATGGCGTTTGAGACTAAA
AGTCTGGAATTTTTAGCCTTAGTTTGTTTGCCTGCGAAAAACTTTCATGC
TATTCTTTTTTTGATACTTATTTATGTCTTCGCAGGGTGGTAATTTTGTG
CAGCAATTAGTCATAACAAATAATAAAATATCCTTTTCCTTAATTATATC
AATCAAACTTATTTCTTTTTCCGAATTTGTATGCCTTTTTTAATGCAAAA
AAGTAAATTTATATTGGTTACGATTAAAGCAAATATTATTATTCAATGTT
TCCTTTTTCATTCCTTTTCTAAATATTTATTATCTTTTTGACAGTAAAAA
AAATTAATCATGGTTTTTGTAAGACCGATGATTGTTGAAAAGCTTTCTAA
TGAAAAAGGGAACAATTTTTCGTTTTGTTGACTTCAAGGCTATTTCAAGG
CTCTCATTGCTCTTATTATTTTATAGCGCTTAACTGTCCGCAACAATCTT
TGGATAAGAGGAAAATCATAGGACTCGATCATTGCAGCATCAAAAATGCT
GGAAATTATGATGACATCGCCAACTCGTGCCCCATGGTTCAAGAGTTAGA
TGTTTCCTCAAACTACTTCGAAGATTGGAGCGAAGTAGGTGTCCTTGGAT
CATTTTTTAAATGTATCATTTTGAAATTACAGCCCGTTTCTTTTTATGTA
GAAGAATTTGCATTATTAATAAATATCATGTCAATTCATTAAAATTAATT
TATTTTCTCCTTCATCAATATATTTCATCAATTAAGTATTGATCAAACAT
GAATGTACAACCATCATTTCATAATTATAAATTCTTTATCATCGACTTCA
TTTTACAAAATCTAACCAACAGCATATATAAATCCTGTTCACGACGACTT
TTTTTACCATGCCATATTAAAACACCCTCAAGGGAATTAATCTAATGCCA
TGGGCATGGTTTCTACATGAATTCNTTTTTACCATGCCATATTAAAACAC
CCTCAAGGGAATTAATCTAATGCCATTGGCATGGTTTCTACATGAATGAA
AAAATCTTGAACAGACATTCCGCTAATCCCCTTTATTCGGATTTGATTTT
CAGATAATTAACATCACAAAATGTTTGAGACATTTGACCTGTTTGAATGT
TTCACACAACCCACTGGATAGGGATACTTTGCTTCAACATGACCACAACT
TGTCAACACCTCAAAAGTCCATCCACAGTTTAGTCATCAATAACACTGGC
ATCGATTTCCAATCTCTTCTTAAACTACTTGATATCTACCCAAGGTAATA
TAATTTTCATGCTTGACAAATGATAAACACTTGAGATTCTTCTCTGTACC
AAATTTCTTGTACTGAATCTTTGAAATACAAGGGCATAGGATTTCTCTAA
GATACTATGGCATTGGTTCGAGAAGAGTAGCGTCAATTGTCGAGCTTGTT
CGAATTGAAAAATTAGTGCAGGTTTTAGGTCTTGGATAACTACAGCCCCT
TCCCACTGAAAAAAATTGGCCAAATTATCGTCCCGGAATATTATCCTCCA
ATTTTTGTTGCAACTAAAAAATAATCAAATAAACCAGTCAATCCTCACTG
CAAAAGATTTGTTATTTTTCCCATCCCCACTGGATTTTCTGACTTGAAAA
CAAAAGAATTTGAATAAAATATTTGGGATTATTGATCCCCATCGCGTTTC
AGTCCGTTATTTTTATCTCCACTGGCTAAAATAAATTCTACCGGGTCTGT
GAGAAGGGGGTGTATAACTTAAGGGTTTTTTGGTCCTCACTTGGAAGTTA
GTTTTGCACTTTTACACTTTCAAACTACCATATTTAACTTTTTGTTTTGC
AAGAGTGTGGTTCATTGGAGTTTTGGTCGAAAGTTTTTGAATTCTTGGAA
GGGATCATCTCCTGATTAACGTTTTCATCGTGCTAACCAAAATATCCTCG
TCGCTCTGAAAATAATATTTGTAGTTTGATGATAGAATTTCAAACTTACG
TAATGATAGACAACTTTGAGTTCAACTTTTAGCAACCAAGTTATAAACAA
TTTGAAAGTTTTTATATTATTTTATTCTTCAGTGTTGCCGTGCTTCACTT
CTGCATCAATGATATTTCTTCCATCCCCGGAAACCTGAACAAACAGTATG
AAAATGTTACCACTGTCTCTATGGCAAAAAATAACATCAAGACATGGGCT
GATATCCGAAAAATTGGAAAACTTTTCCCGAATCTCGTTTCTTTGAATAT
CAGTGAAAATTTATTCAAAGAAATTAAATATGAAAAAAATAGCAATGACT
TTTGTCATTTGAAGAACTTGAACATTATGGAGTGCCCCATCGATGATTGG
GAATCTATTGAGAATCTCCAACATCTGCCACAGTTAAGAGAGTTACGAAT
TAAAGGCTGTCCTATTTACGCAAAGAAATCGTTGACCGAGAAACAACAAC
GTTGTTTGACGGTTGCTAGGTTACCGAATGTTACCAAATTAAACGGGAGT
AACGTAGAGGACGAAGAACGTGAGGACGCGGAGAGGCTGTTCATCAGGTT
TCATATGAAAGGTGAAAACAAGCCCACTCGTTATCAAGATCTTATACAAA
CATACGGAAAGTTAGACGAATTGGCTGAAGTGAATTTTGATAGAAGTTTC
ATTGTCAATGTTCTGGTAAAAGGAGACGTGGAATCACCTTTCCTCTATTC
CTTGGATTGCTCTCAAACTGTTCGCTCTTTGTATAAGGAACTTGGCACGC
GATTGAAATTGAAGAAGAATAAGTTCAATTTGGTTCATTTTGAGCAGGAG
GAAGAAGAAAACGATAGTACATATGTTGGCCGTAAGATGAAGAAATCAAA
TGTGCAGCGCGTGACAAGCTATTATGTTCGTGAAGGAGATTCTGTGCAAG
TCATTCGTCTTGATCTCGACATTGATTGAACATGTGAACGAATGAAATAC
ATTGACTTTGTGTAAAAAGAACTTTCTAAAAATGAAAAAGTTTTCTTCCG
TTTACTTTCGATTATATTATTCTCATATTATCCTCTTTCAATTATGAATT
ATCCTTGCGTATCGAATTTTTGCAATATTTATCATATCTTGTATATATTC
ATTGTAGTGGTAGCATCGCTCTCAACCTTCTCAACCCTTATCACGTCCTT
TACTATTGAATATTATTATATCCGATTGAAGTTCCAATCTAAAATTAATT
TTTCATTGTAAATATTGTGAGGGTAGAAAGTGAAGAGCTCAGTGAGGCAG
AGATGTGTACCTGTTTGATCCAGACAGAGAATATCATTTATTTGATCGCT
TTGTTTTGGAAACAGACGACCGTTTTAACTTTTTGTGTTTAATTTGTTTT
TATGGTGATTTGTTCTATATTGTTCCTTCCTTTAATTTGGCTCGAATCGA
GTTAGTATTGTATTTTTGTGGACTAACCACTGTGAAACACAAAACGCTAA
GATGCAATGATCAGTTGCCCTTCCTGGTGCTTTCCATATTGGTGTTGATT
ATGATTATGAGATGTTTCCAGCTATGTTTTGTTAACGATTGATTATCAGG
TGCTTAATTTTTCGTATTTGTCTTGTAAATAACCGTAGTATTTTTGATGA
ACTTTATTTTATGTAAATATTTATTTCTAATGCGCAGTATTTTATACAAT
ATCCTTTTTCAACAGGACACGCATGATGCTTCGTTAATCTTGGTATTTTC
AACTTACCCAAAGACCCGGTGGAACCAATACCCACTGGAAAATTTTATTT
GAAAACTTCAATAAGCTCAAATCCCTACTGAGTATGATACTAAAAATTTG
AGTATGCACATTGCATTTTTAATAT

Coding sequence (CDS) from alignment at scaffold_203:113582..122656-

>TCONS_00051733 ID=TCONS_00051733|Name=TCONS_00051733|organism=Clytia hemisphaerica|type=CDS|length=5196bp|location=Sequence derived from alignment at scaffold_203:113582..122656- (Clytia hemisphaerica)
TGTTGCCGTGCTTCACTTCTGCATCAATGATATTTCTTCCATCCCCGGAA
ACCTGAACAAACAGTATGAAAATGTTACCACTGTCTCTATGGCAAAAAAT
AACATCAAGACATGGGCTGATATCCGAAAAATTGGAAAACTTTTCCCGAA
TCTCGTTTCTTTGAATATCAGTGAAAATTTATTCAAAGAAATTAAATATG
AAAAAAATAGCAATGACTTTTGTCATTTGAAGAACTTGAACATTATGGAG
TGCCCCATCGATGATTGGGAATCTATTGAGAATCTCCAACATCTGCCACA
GTTAAGAGAGTTACGAATTAAAGGCTGTCCTATTTACGCAAAGAAATCGT
TGACCGAGAAACAACAACGTTGTTTGACGGTTGCTAGGTTACCGAATGTT
ACCAAATTAAACGGGAGTAACGTAGAGGACGAAGAACGTGAGGACGCGGA
GAGGCTGTTCATCAGGTTTCATATGAAAGGTGAAAACAAGCCCACTCGTT
ATCAAGATCTTATACAAACATACGGAAAGTTAGACGAATTGGCTGAAGTG
AATTTTGATAGAAGTTTCATTGTCAATGTTCTGGTAAAAGGAGACGTGGA
ATCACCTTTCCTCTATTCCTTGGATTGCTCTCAAACTGTTCGCTCTTTGT
ATAAGGAACTTGGCACGCGATTGAAATTGAAGAAGAATAAGTTCAATTTG
GTTCATTTTGAGCAGGAGGAAGAAGAAAACGATAGTACATATGTTGGCCG
TAAGATGAAGAAATCAAATGTGCAGCGCGTGACAAGCTATTATGTTCGTG
AAGGAGATTCTGTGCAAGTCATTCGTCTTGATCTCGACATTGATTGAATA
ATTAACATCACAAAATGTTTGAGACATTTGACCTGTTTGAATGTTTCACA
CAACCCACTGGATAGGGATACTTTGCTTCAACATGACCACAACTTGTCAA
CACCTCAAAAGTCCATCCACAGTTTAGTCATCAATAACACTGGCATCGAT
TTCCAATCTCTTCTTAAACTACTTGATATCTACCCAAGCGCTTAACTGTC
CGCAACAATCTTTGGATAAGAGGAAAATCATAGGACTCGATCATTGCAGC
ATCAAAAATGCTGGAAATTATGATGACATCGCCAACTCGTGCCCCATGGT
TCAAGAGTTAGATGTTTCCTCAAACTACTTCGAAGATTGGAGCGAAATGA
ATATGGAACAGTCTGATTTGAAAACTTTTTGCAATGCCCTCCATGAGAAA
TTCTCCTCTCAATATGACTTTGATAATTTGGATAACATAATTGTCAGATT
GTTGCCGTGCTTCACTTCTGCATCAATGATATTTCTTCCATCCCCGGAAA
CCTGAACAAACAGTATGAAAATGTTACCACTGTCTCTATGGCAAAAAATA
ACATCAAGACATGGGCTGATATCCGAAAAATTGGAAAACTTTTCCCGAAT
CTCGTTTCTTTGAATATCAGTGAAAATTTATTCAAAGAAATTAAATATGA
AAAAAATAGCAATGACTTTTGTCATTTGAAGAACTTGAACATTATGGAGT
GCCCCATCGATGATTGGGAATCTATTGAGAATCTCCAACATCTGCCACAG
TTAAGAGAGTTACGAATTAAAGGCTGTCCTATTTACGCAAAGAAATCGTT
GACCGAGAAACAACAACGTTGTTTGACGGTTGCTAGGTTACCGAATGTTA
CCAAATTAAACGGGAGTAACGTAGAGGACGAAGAACGTGAGGACGCGGAG
AGGCTGTTCATCAGGTTTCATATGAAAGGTGAAAACAAGCCCACTCGTTA
TCAAGATCTTATACAAACATACGGAAAGTTAGACGAATTGGCTGAAGTGA
ATTTTGATAGAAGTTTCATTGTCAATGTTCTGGTAAAAGGAGACGTGGAA
TCACCTTTCCTCTATTCCTTGGATTGCTCTCAAACTGTTCGCTCTTTGTA
TAAGGAACTTGGCACGCGATTGAAATTGAAGAAGAATAAGTTCAATTTGG
TTCATTTTGAGCAGGAGGAAGAAGAAAACGATAGTACATATGTTGGCCGT
AAGATGAAGAAATCAAATGTGCAGCGCGTGACAAGCTATTATGTTCGTGA
AGGAGATTCTGTGCAAGTCATTCGTCTTGATCTCGACATTGATTGAATAA
TTAACATCACAAAATGTTTGAGACATTTGACCTGTTTGAATGTTTCACAC
AACCCACTGGATAGGGATACTTTGCTTCAACATGACCACAACTTGTCAAC
ACCTCAAAAGTCCATCCACAGTTTAGTCATCAATAACACTGGCATCGATT
TCCAATCTCTTCTTAAACTACTTGATATCTACCCAAGCGCTTAACTGTCC
GCAACAATCTTTGGATAAGAGGAAAATCATAGGACTCGATCATTGCAGCA
TCAAAAATGCTGGAAATTATGATGACATCGCCAACTCGTGCCCCATGGTT
CAAGAGTTAGATGTTTCCTCAAACTACTTCGAAGATTGGAGCGAAATGAA
TATGGAACAGTCTGATTTGAAAACTTTTTGCAATGCCCTCCATGAGAAAT
TCTCCTCTCAATATGACTTTGATAATTTGGATAACATAATTGTCAGATTG
TTGCCGTGCTTCACTTCTGCATCAATGATATTTCTTCCATCCCCGGAAAC
CTGAACAAACAGTATGAAAATGTTACCACTGTCTCTATGGCAAAAAATAA
CATCAAGACATGGGCTGATATCCGAAAAATTGGAAAACTTTTCCCGAATC
TCGTTTCTTTGAATATCAGTGAAAATTTATTCAAAGAAATTAAATATGAA
AAAAATAGCAATGACTTTTGTCATTTGAAGAACTTGAACATTATGGAGTG
CCCCATCGATGATTGGGAATCTATTGAGAATCTCCAACATCTGCCACAGT
TAAGAGAGTTACGAATTAAAGGCTGTCCTATTTACGCAAAGAAATCGTTG
ACCGAGAAACAACAACGTTGTTTGACGGTTGCTAGGTTACCGAATGTTAC
CAAATTAAACGGGAGTAACGTAGAGGACGAAGAACGTGAGGACGCGGAGA
GGCTGTTCATCAGGTTTCATATGAAAGGTGAAAACAAGCCCACTCGTTAT
CAAGATCTTATACAAACATACGGAAAGTTAGACGAATTGGCTGAAGTGAA
TTTTGATAGAAGTTTCATTGTCAATGTTCTGGTAAAAGGAGACGTGGAAT
CACCTTTCCTCTATTCCTTGGATTGCTCTCAAACTGTTCGCTCTTTGTAT
AAGGAACTTGGCACGCGATTGAAATTGAAGAAGAATAAGTTCAATTTGGT
TCATTTTGAGCAGGAGGAAGAAGAAAACGATAGTACATATGTTGGCCGTA
AGATGAAGAAATCAAATGTGCAGCGCGTGACAAGCTATTATGTTCGTGAA
GGAGATTCTGTGCAAGTCATTCGTCTTGATCTCGACATTGATTGAATAAT
TAACATCACAAAATGTTTGAGACATTTGACCTGTTTGAATGTTTCACACA
ACCCACTGGATAGGGATACTTTGCTTCAACATGACCACAACTTGTCAACA
CCTCAAAAGTCCATCCACAGTTTAGTCATCAATAACACTGGCATCGATTT
CCAATCTCTTCTTAAACTACTTGATATCTACCCAAGCGCTTAACTGTCCG
CAACAATCTTTGGATAAGAGGAAAATCATAGGACTCGATCATTGCAGCAT
CAAAAATGCTGGAAATTATGATGACATCGCCAACTCGTGCCCCATGGTTC
AAGAGTTAGATGTTTCCTCAAACTACTTCGAAGATTGGAGCGAAATGAAT
ATGGAACAGTCTGATTTGAAAACTTTTTGCAATGCCCTCCATGAGAAATT
CTCCTCTCAATATGACTTTGATAATTTGGATAACATAATTGTCAGATTGT
TGCCGTGCTTCACTTCTGCATCAATGATATTTCTTCCATCCCCGGAAACC
TGAACAAACAGTATGAAAATGTTACCACTGTCTCTATGGCAAAAAATAAC
ATCAAGACATGGGCTGATATCCGAAAAATTGGAAAACTTTTCCCGAATCT
CGTTTCTTTGAATATCAGTGAAAATTTATTCAAAGAAATTAAATATGAAA
AAAATAGCAATGACTTTTGTCATTTGAAGAACTTGAACATTATGGAGTGC
CCCATCGATGATTGGGAATCTATTGAGAATCTCCAACATCTGCCACAGTT
AAGAGAGTTACGAATTAAAGGCTGTCCTATTTACGCAAAGAAATCGTTGA
CCGAGAAACAACAACGTTGTTTGACGGTTGCTAGGTTACCGAATGTTACC
AAATTAAACGGGAGTAACGTAGAGGACGAAGAACGTGAGGACGCGGAGAG
GCTGTTCATCAGGTTTCATATGAAAGGTGAAAACAAGCCCACTCGTTATC
AAGATCTTATACAAACATACGGAAAGTTAGACGAATTGGCTGAAGTGAAT
TTTGATAGAAGTTTCATTGTCAATGTTCTGGTAAAAGGAGACGTGGAATC
ACCTTTCCTCTATTCCTTGGATTGCTCTCAAACTGTTCGCTCTTTGTATA
AGGAACTTGGCACGCGATTGAAATTGAAGAAGAATAAGTTCAATTTGGTT
CATTTTGAGCAGGAGGAAGAAGAAAACGATAGTACATATGTTGGCCGTAA
GATGAAGAAATCAAATGTGCAGCGCGTGACAAGCTATTATGTTCGTGAAG
GAGATTCTGTGCAAGTCATTCGTCTTGATCTCGACATTGATTGAATAATT
AACATCACAAAATGTTTGAGACATTTGACCTGTTTGAATGTTTCACACAA
CCCACTGGATAGGGATACTTTGCTTCAACATGACCACAACTTGTCAACAC
CTCAAAAGTCCATCCACAGTTTAGTCATCAATAACACTGGCATCGATTTC
CAATCTCTTCTTAAACTACTTGATATCTACCCAAGCGCTTAACTGTCCGC
AACAATCTTTGGATAAGAGGAAAATCATAGGACTCGATCATTGCAGCATC
AAAAATGCTGGAAATTATGATGACATCGCCAACTCGTGCCCCATGGTTCA
AGAGTTAGATGTTTCCTCAAACTACTTCGAAGATTGGAGCGAAATGAATA
TGGAACAGTCTGATTTGAAAACTTTTTGCAATGCCCTCCATGAGAAATTC
TCCTCTCAATATGACTTTGATAATTTGGATAACATAATTGTCAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032754XLOC_032754Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051733-exon-scaffold_203-1575043694:122430..122656TCONS_00051733-exon-scaffold_203-1575043694:122430..122656Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1575043694:116773..116930TCONS_00051733-exon-scaffold_203-1575043694:116773..116930Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1575043694:116113..116303TCONS_00051733-exon-scaffold_203-1575043694:116113..116303Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1575043694:114476..115324TCONS_00051733-exon-scaffold_203-1575043694:114476..115324Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1575043694:113582..114434TCONS_00051733-exon-scaffold_203-1575043694:113582..114434Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1510915933:122430..122656TCONS_00051733-exon-scaffold_203-1510915933:122430..122656Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1510915933:116773..116930TCONS_00051733-exon-scaffold_203-1510915933:116773..116930Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1510915933:116113..116303TCONS_00051733-exon-scaffold_203-1510915933:116113..116303Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1510915933:114476..115324TCONS_00051733-exon-scaffold_203-1510915933:114476..115324Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1510915933:113582..114434TCONS_00051733-exon-scaffold_203-1510915933:113582..114434Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1491911889:122430..122656TCONS_00051733-exon-scaffold_203-1491911889:122430..122656Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1491911889:116773..116930TCONS_00051733-exon-scaffold_203-1491911889:116773..116930Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1491911889:116113..116303TCONS_00051733-exon-scaffold_203-1491911889:116113..116303Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1491911889:114476..115324TCONS_00051733-exon-scaffold_203-1491911889:114476..115324Clytia hemisphaericaexon
TCONS_00051733-exon-scaffold_203-1491911889:113582..114434TCONS_00051733-exon-scaffold_203-1491911889:113582..114434Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051733-proteinTCONS_00051733-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_203supercontigscaffold_203:113582..122656 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.77318	5.13344	9.43571	8.35762	15.6781	9.95876	15.1453	18.9258	17.6142	24.6101	36.2564	19.8023	51.1247	35.068	24.7704	40.9917	21.7157	35.6365	44.2028	53.8084	37.4353	38.1609	15.9449	19.0542	28.3518	31.5306	60.121	51.9425	76.9851	59.9562
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00051733 vs. Swiss-Prot (Human)
Match: TBCEL (Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens GN=TBCEL PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 4.227e-56
Identity = 142/444 (31.98%), Postives = 230/444 (51.80%), Query Frame = 2 
Query:  131 MEQSDLKTFCNALHEKFSSQ-YDFDNLDNIIVRSLNCPQQS-----LDKRKIIGLDHCSIKNAGNYDDIANSCPMVQELDVSSNYFEDWSEIINITKCLRHLTCLNVSHNPLDRDTLLQHDHNLSTPQKSIHSLVINNTGIDFQSLLKLLDIYPSVAVLHFCINDISSIPGNLNKQYENVTTVS----------MAKNNIKTWADIRKIGKLFPNLVSLNISENLFKEIKYEKNS--NDFCHLKNLNIMECPIDDWESIENLQHLPQLRELRIKGCPIYAKKSLTEKQQRCLTVARLPNVTKLNGSNVEDEEREDAERLFIRFH--MKGENKPTRYQDLIQTYGKLDELAEVNF--DRSFIVNVLVKGDVESPFLYSLDCSQTVRSLYKELGTRLKLKKNKFNLVHFEQEEEENDSTYVGRKMKKSNVQRVTSYYVREGDSVQV 1396
            M+Q   ++F   L EK+S + + +     + V     PQ S     L+   ++ L+ C I  AG+  +IA  C  V ELD+S N  EDW E+  I   +  L  LN+S NPL+   L   +   +     +  LV+NN+   ++++  +L   P +  L  C+ND           YE V+  S          +  NN++ W +IRK+G +FP+L +L ++ N    I+   +S    F +L+++++ +  +  WE I+ L   P+L E+R+ G P+   +  T +++R L +ARLP+V+KLNGS V D ERED+ER FIR++  +  E  P RY +LI  YGKL+ LAEV+     S  V V     VE     S+   QTV  L K+L T ++L  +   L +F+ E     + +   +MK S+ + + S+ +R+GD + V
Sbjct:    1 MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHVPATPQGSPMKDRLNLPSVLVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVL---ERTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLND-----------YETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLL--QPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDSERFFIRYYVDVPQEEVPFRYHELITKYGKLEPLAEVDLRPQSSAKVEVHFNDQVEE---MSIRLDQTVAELKKQLKTLVQLPTSNMLLYYFDHE-----APFGPEEMKYSS-RALHSFGIRDGDKIYV 419
The following BLAST results are available for this feature:
BLAST of TCONS_00051733 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCEL4.227e-5631.98Tubulin-specific chaperone cofactor E-like protein... [more]
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