|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051797 ID=TCONS_00051797|Name=TCONS_00051797|organism=Clytia hemisphaerica|type=transcript|length=1695bp TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA TGGAAGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACT GAGTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATC ATatttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGG AAAGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATC CAATCAGCATTCTATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAAC TACCTGAATCTTCTTACATGACTGCTCAATTGATGGACTTTGAAACTGGT GACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATAC GCTGAAAAACCCTAATATAAAGTGGAGAATTGACAGAACTCAGCGTAAAG AAAATGGTGTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCA TTCGTTTGGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGAT ACTTATAAACACACCGACTAGAAGGATTTCATTTTTGTCATACCATGAGA AGTCAAATAACCAGAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCT TTGTATAATGTCTGGCATTAAAATGTCCTTTTGCAAACAATAGACAATGA AAGGCATTCAAATAGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGT TAATGGAAAATTATTCccatttcaattttgtttgtgtttacctttaaaag gtaacatttttaaattgtttttgtttcatttagaaatattttaagactgt ttttcgATATGAGTATTAAGTTTCTATGATATGATTGAAATGACATTTTA GTCCATTTATGACGTTGATGTTTGACAAAGCTTTTCATGTGAAAGCTGTT TTAACTTGAAGCAATGAGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAA AGATCACGTGATTATACGCCTGACTATAAAATAAGATTTTATATGATAAT ATAATTATTAATTGGACATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTT GTTGAGTACTCCAAGGGGatgtaccgggtgcgccaaGAAAAAGTATACAA AGTGTACAGTATAGTAGGCCTGATTGGTGCTAAAAAAGTTTCTTGGTTAA AATAGTGCAAATTTGGAAATCGAATAACTCCCGCTCAGTACAGAAATCGG CCATTATCGTCTTCTATAGTCTCCTATATTATTCTTCGAAAGCTTTAATT GGTTTTGGCCTAAagtgagtttgaaatttccgaAAAAAGATTAGACTCTT GGGTTGTAGCCTGGTTTTCACGAAATGGGTCAGGAAATAACGGCTATacc cttttttggacctaccccggtggggtggaggtcctataaattaac Run BLAST on NCBI transcript from alignment at scaffold_205:24202..37930+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051797 ID=TCONS_00051797|Name=TCONS_00051797|organism=Clytia hemisphaerica|type=transcript|length=13729bp|location=Sequence derived from alignment at scaffold_205:24202..37930+ (Clytia hemisphaerica) TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA
AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA
ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA
TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC
CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA
ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA
TGGAAGGTAATATTATATCAAAACTTCTatagttgatgctctctaattcg
attggATTGGATTTTAATCCaataagggagcgtattgaATAATAGATTTT
TATGTCGTCTGTGACTTTTAATATTATCGAGTAATGGAGCgcatcgaata
gtagaaagtcgaataagagagcatcaactatatttttttttatttcattt
ataaccgtattacttcaaataatgcccccttcttttaaacgcccctcaaa
taaacgccctctTTGAATAAACGCCTCCCCACTAGGAAGGGCGTTTACTT
CAATGGGATTAATTtcgtggggattaaatttcgcggtttagcTCATCTGC
GAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttattt
ggcacctaagagtaatgtagcatctttaatggtaaatctTTTTGGTTTGT
CGTTatacttctcagtgcgttttagacattaatgatatgcccttgataat
acacttgcattataaaatcattgtaaaggagagatcaacaataagaaatt
taaacaagcacaaaatggctgggctgaaagaactcaaaaattaataaagt
gcctcgaaatgccttcactACATTTCagtgaatttttttagaaatcaatg
aaaaagtacatcaagataatactgtgaaaatttaaagccagcaccaaaat
ttatcattcaaactgacaggaaagttgtgagagtaagtaagtatttattt
atcatttaacactacaaaaaagatacaagtgatgatatgcacaaaaaata
tatgaagggagaccgccttatagtctagctaatcaaaaagatgcggccac
ctaagtACAGATTGcgtttataacacttcatgaattatttataaatattt
atatatcttgaatatagttcttataattttaaatctggcgaaaaactatt
gtttccacaaaatacccctagaatatgtccaaaattacttcaagtgttct
attgggtacagattaagatatctagcaatgagaaaactttttttgaagga
aaataataAACTGACAATCTTGATGCTCTGATAAAGGtcggagacagaga
tagaacagcaattaactgaaaagacaatgcggtacatattccagccgcgg
ttTTTTTATATACTATGGTTTCTCTTCAATGTCTTCTTTCCTAGTACACA
ATTATTCTTTTCAATGATTTCATTTGGCCTTCTTGATAGACCGTTAAAAA
ATTTCTTCGTATGCAAACTACGGATGTGGCAAATCATTCCTTCTACAAGA
ATGCAAGTTGATGTATTCGTTCTTTTTATAAAGTTTGACAGAGAATAATT
ACTTGTGGTTTTGCTCTTTTGCTCCCTTTTAACCGTTCAGAATTCCCTTT
TGACAAATTTGATGCAATGATTgatgttatctttttttctctttcattgC
ATCCTGTGTGAGATGtaatcataatttttttgaattagcCCGATATATGC
TATTTTATATGAATGGACTCGAATGACATACTggccaaaatataaaaaat
ataccgTCAACTTATTTGTAataaatggctgtaacttttgatagaattcg
aatcaagttgcggttGTGTGCTCGTTAAatagatattcgtgagtggaata
ttatcaagtaaaaaaattgagatttagggcattttccaaacatttttatA
TGTACTTAATGGTCAATGGTTCTTCGTCGTTGCTCAAGATTTTCAGAAAC
ACACCATATATTTACATATACACgaacgtccaaagttttgaagcgttcgg
atgttcttaacattttgagttttaagcctaaaaatgttcttagcatgttc
ttattttcgtcatttttgataactttgtcCATTTGCCTataaaattgggt
gttttacaGTCCGCGAAGCCTAacattcttaacttgttcctaacattttg
gtcatcgaagccttatgtatgttcttatatagttttagAAAGTTTTAGTC
AAGTAGATCAGCTAATTTGACATTGAATTATGTCACTAATATGTGAAAAT
AGTCAATATAGGAGATTTTTGTCctgaaaaagaaacattttcaatCCATT
CGGCTCTTTCCTCTGTGAAAACTTACCTTTATGCCTAATCATGATATTTG
TAGAAATTGTTCGCAGTGTTCTTTATCGGCaagtatttttctttctgttt
acaGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACTGA
GTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATCAT
atttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGGAA
AGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCA
ATCAGCATTCTGTAATCTATCGTTACTTTTATTTGTTTCTTGATTTATAG
GGGAATACAAGCATTGCTACGGATGAGAAACAGCTGAGGGCTAAAAAGGA
ATCTTAAGATACCTTGGATTTCGGCTTATAGATTTAATCTAGAGCCTTTT
TTATTTATGTACACATTTTCAAGAGGATAGGACCTTCGCCTCTAGCCTAT
GGCTATATCTCACCGATTATTACAATATATTTCGGTCGATTTTATCTTAT
CTCAGATGGTAAATCTTGAGAAGTGATAAACTTCATTCCCTAGCTTACGT
TCACTTAAAGTTTTAACTAACATCAATGGTTCCCTGTTTATCCTAGTAGA
AAGGTCAAATTCTTATCTCAAAATTCCCATTTTCAGTATCTGTCTATGTT
GATTTAAGAGTGCACAGTGTTAAACCTTTTGAAATGCACTTTGCATCTGT
ATAGAAAATGAAAGATTGCTGTCACACCCATTACTTCGTGAGCTTTCCAG
TTTATGattcttgaaaatgttttagATTGAGATCTTTCAAAAGAGCATAA
CCGAGTTGCAACTACCTGAATCTTCTTACATGACTGCTCAATTGATGGAC
TTTGAAACTGGTGACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTT
CTCTGGTGATACGCTGAAAAACCCTAATATAAAGGTACTTACTATATaga
tattttccttttttatgaGCAAAGGTCATGAAACTAGGCATATCTTATGA
GCACTAGAATTAATCTCGTTTCGATAGCCTTGATTCACTTGATTATattt
tgataactgaaaattaattcacgTAGGAATAGGAAAACAGCTCAGACCTA
CTTATCGAGGATATCTTGGTCGGATTATGATTCAAATCTATAGAGTTTTT
GTCTACAATTAAGTAATAAATAATCTTTTAATTATGTCTTCAAATTCTTC
ATGCAACAGAATTCTGGCtggaaaacttttttcgctaCCCAATGCTTTTG
ATTTGAAACccaattagaattttttttcgtaaAAAATGATATCAAACATG
AGGAACTTATGCATCTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTA
TAATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatat
attttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGG
TGTGGATTTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTT
GGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATA
AACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTT
AAATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGT
GAAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaa
ttctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAA
GCAAATCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg
gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGTgtca
ccgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTCT
GTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAA
ACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGAA
AGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTC
ATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTATG
AGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAG
CTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTTT
CAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATG
GAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTC
ACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattgat
ttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGCG
GGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTT
GACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagttat
agaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCAG
GGGAGCCAGGGGGNTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTAT
AATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatata
ttttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGT
GTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTG
GCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAA
ACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTA
AATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGTG
AAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaat
tctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAG
CAAAGTCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg
gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGGTgtc
accgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTC
TGTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAA
AACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGA
AAGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGT
CATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTAT
GAGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAA
GCTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTT
TCAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAAT
GGAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGT
CACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattga
tttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGC
GGGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGT
TGACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagtta
tagaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCA
GGGGAGCCAGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccaatattttgcaaag
tattttttttttactttagaaaatcttatatataccgtttagaggggtga
aataagggtaaaaagtcgaaaattttcttcgtcgcccatccggtgggcga
catttttttttggccccctcaattcgatttgcacgccgggggccatgcTA
TGAAAATTGGTttacatcaaaaaatttctgCACAAAACCTCTTTTTGTTG
TAAAAAACTTAGTTAATAATCGGTATCTTGACAAATTAATTCTGAAGACC
AAATTATTTTAAAGTCACAGTCTtgtcaaaatataattttgtgaTATTTC
TTTTTATAGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCAGAA
AGTGGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGC
ATTAAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAATAGA
ATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTC
ccatttcaattttgtttgtgtttacctttaaaaggtaacatttttaaatt
gtttttgtttcatttagaaatattttaagactgtttttcgATATGAGTAT
TAAGTTTCTATGATATGATTGAAATGACATTTTAGTCCATTTATGACGTT
GATGTTTGACAAAGCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATG
AGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAAAGATCACGTGATTATA
CGCCTGACTATAAAATAAGATTTTATATGATAATATAATTATTAATTGGA
CATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGG
GGatgtaccgggtgcgccaaGAAAAAGTATACAAAGTGTACAGTATAGTA
GGCCTGATTGGTGCTAAAAAAGTTTCTTGGTTAAAATAGTGCAAATTTGG
AAATCGAATAACTCCCGCTCAGTACAGAAATCGGCCATTATCGTCTTCTA
TAGTCTCCTATATTATTCTTCGAAAGCTTTAATTGGTTTTGGCCTAAagt
gagtttgaaatttccgaAAAAAGATTAGACTCTTGGGTTGTAGCCTGGTT
TTCACGAAATGGGTCAGGAAATAACGGCTATacccttttttggacctacc
ccggtggggtggaggtcctataaattaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00051797-exon-scaffold_205-1491911889:24202..24507 | TCONS_00051797-exon-scaffold_205-1491911889:24202..24507 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1510915933:24202..24507 | TCONS_00051797-exon-scaffold_205-1510915933:24202..24507 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1575043694:24202..24507 | TCONS_00051797-exon-scaffold_205-1575043694:24202..24507 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1491911889:30956..31162 | TCONS_00051797-exon-scaffold_205-1491911889:30956..31162 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1510915933:30956..31162 | TCONS_00051797-exon-scaffold_205-1510915933:30956..31162 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1575043694:30956..31162 | TCONS_00051797-exon-scaffold_205-1575043694:30956..31162 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1491911889:31677..31835 | TCONS_00051797-exon-scaffold_205-1491911889:31677..31835 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1510915933:31677..31835 | TCONS_00051797-exon-scaffold_205-1510915933:31677..31835 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1575043694:31677..31835 | TCONS_00051797-exon-scaffold_205-1575043694:31677..31835 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1491911889:33566..33718 | TCONS_00051797-exon-scaffold_205-1491911889:33566..33718 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1510915933:33566..33718 | TCONS_00051797-exon-scaffold_205-1510915933:33566..33718 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1575043694:33566..33718 | TCONS_00051797-exon-scaffold_205-1575043694:33566..33718 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1491911889:37061..37930 | TCONS_00051797-exon-scaffold_205-1491911889:37061..37930 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1510915933:37061..37930 | TCONS_00051797-exon-scaffold_205-1510915933:37061..37930 | Clytia hemisphaerica | exon |
TCONS_00051797-exon-scaffold_205-1575043694:37061..37930 | TCONS_00051797-exon-scaffold_205-1575043694:37061..37930 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_205 | supercontig | scaffold_205:24202..37930 + |
Blast
BLAST of TCONS_00051797 vs. Swiss-Prot (Human)
Match: MANBA (Beta-mannosidase OS=Homo sapiens GN=MANBA PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 2.198e-35 Identity = 88/282 (31.21%), Postives = 148/282 (52.48%), Query Frame = 1
Query: 40 GNMEIEAFVRQHFELPRSSKNTTLYLSMMVYLSQIVQSLCIKYESEHYRRLQDTLIDGKGHTMGALYWQLNDIWPGPSWSSLEYNGQWKILHYDVEKFFAPTSLSAYRNKDSIVVNIVRDHISNEKKLLCNISFHDWKEFGILWNKTWLLDLSSNQHSIEIFQKSITELQLPESSYMTAQ--LMDFETGDVVSSTELFLSNFSGDTLKNPNIKWRIDRTQ----RKENGVEFDVILSLDAPSAFVWLDTPN-RGRFRENGILINTPTRRISFLSYHEKSNNQ 864
GN ++ HF+LP+S+ + +YL+Q++Q+ C+K E+E YRR + ++D +GHTMGALYWQLNDIW PSW+SLEY G+WK+LHY + FFAP + N+++ + V D + ++ + ++ H W + ++ + ++ ++++ ++EL L T + ++ F +S+ LS + L +P + + Q + G F L A + FVWLD + GRF +NG L+ TR I F + S N+
Sbjct: 591 GNKQMLYQAGLHFKLPQSTDPLRTFKDT-IYLTQVMQAQCVKTETEFYRRSRSEIVDQQGHTMGALYWQLNDIWQAPSWASLEYGGKWKMLHYFAQNFFAPLLPVGFENENTFYIYGVSD-LHSDYSMTLSVRVHTWSSLEPVCSRVTERFVMKGGEAVCLYEEPVSEL-LRRCGNCTRESCVVSF----YLSADHELLSPTNYHFLSSPKEAVGLCKAQITAIISQQGDIFVFDLETSAVAPFVWLDVGSIPGRFSDNGFLMTEKTRTILFYPWEPTSKNE 865
The following BLAST results are available for this feature:
|