TCONS_00051797 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051797
Unique NameTCONS_00051797
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1695

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051797 ID=TCONS_00051797|Name=TCONS_00051797|organism=Clytia hemisphaerica|type=transcript|length=1695bp
TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA
AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA
ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA
TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC
CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA
ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA
TGGAAGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACT
GAGTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATC
ATatttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGG
AAAGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATC
CAATCAGCATTCTATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAAC
TACCTGAATCTTCTTACATGACTGCTCAATTGATGGACTTTGAAACTGGT
GACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATAC
GCTGAAAAACCCTAATATAAAGTGGAGAATTGACAGAACTCAGCGTAAAG
AAAATGGTGTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCA
TTCGTTTGGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGAT
ACTTATAAACACACCGACTAGAAGGATTTCATTTTTGTCATACCATGAGA
AGTCAAATAACCAGAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCT
TTGTATAATGTCTGGCATTAAAATGTCCTTTTGCAAACAATAGACAATGA
AAGGCATTCAAATAGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGT
TAATGGAAAATTATTCccatttcaattttgtttgtgtttacctttaaaag
gtaacatttttaaattgtttttgtttcatttagaaatattttaagactgt
ttttcgATATGAGTATTAAGTTTCTATGATATGATTGAAATGACATTTTA
GTCCATTTATGACGTTGATGTTTGACAAAGCTTTTCATGTGAAAGCTGTT
TTAACTTGAAGCAATGAGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAA
AGATCACGTGATTATACGCCTGACTATAAAATAAGATTTTATATGATAAT
ATAATTATTAATTGGACATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTT
GTTGAGTACTCCAAGGGGatgtaccgggtgcgccaaGAAAAAGTATACAA
AGTGTACAGTATAGTAGGCCTGATTGGTGCTAAAAAAGTTTCTTGGTTAA
AATAGTGCAAATTTGGAAATCGAATAACTCCCGCTCAGTACAGAAATCGG
CCATTATCGTCTTCTATAGTCTCCTATATTATTCTTCGAAAGCTTTAATT
GGTTTTGGCCTAAagtgagtttgaaatttccgaAAAAAGATTAGACTCTT
GGGTTGTAGCCTGGTTTTCACGAAATGGGTCAGGAAATAACGGCTATacc
cttttttggacctaccccggtggggtggaggtcctataaattaac
Run BLAST on NCBI

transcript from alignment at scaffold_205:24202..37930+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051797 ID=TCONS_00051797|Name=TCONS_00051797|organism=Clytia hemisphaerica|type=transcript|length=13729bp|location=Sequence derived from alignment at scaffold_205:24202..37930+ (Clytia hemisphaerica)
TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA TGGAAGGTAATATTATATCAAAACTTCTatagttgatgctctctaattcg attggATTGGATTTTAATCCaataagggagcgtattgaATAATAGATTTT TATGTCGTCTGTGACTTTTAATATTATCGAGTAATGGAGCgcatcgaata gtagaaagtcgaataagagagcatcaactatatttttttttatttcattt ataaccgtattacttcaaataatgcccccttcttttaaacgcccctcaaa taaacgccctctTTGAATAAACGCCTCCCCACTAGGAAGGGCGTTTACTT CAATGGGATTAATTtcgtggggattaaatttcgcggtttagcTCATCTGC GAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttattt ggcacctaagagtaatgtagcatctttaatggtaaatctTTTTGGTTTGT CGTTatacttctcagtgcgttttagacattaatgatatgcccttgataat acacttgcattataaaatcattgtaaaggagagatcaacaataagaaatt taaacaagcacaaaatggctgggctgaaagaactcaaaaattaataaagt gcctcgaaatgccttcactACATTTCagtgaatttttttagaaatcaatg aaaaagtacatcaagataatactgtgaaaatttaaagccagcaccaaaat ttatcattcaaactgacaggaaagttgtgagagtaagtaagtatttattt atcatttaacactacaaaaaagatacaagtgatgatatgcacaaaaaata tatgaagggagaccgccttatagtctagctaatcaaaaagatgcggccac ctaagtACAGATTGcgtttataacacttcatgaattatttataaatattt atatatcttgaatatagttcttataattttaaatctggcgaaaaactatt gtttccacaaaatacccctagaatatgtccaaaattacttcaagtgttct attgggtacagattaagatatctagcaatgagaaaactttttttgaagga aaataataAACTGACAATCTTGATGCTCTGATAAAGGtcggagacagaga tagaacagcaattaactgaaaagacaatgcggtacatattccagccgcgg ttTTTTTATATACTATGGTTTCTCTTCAATGTCTTCTTTCCTAGTACACA ATTATTCTTTTCAATGATTTCATTTGGCCTTCTTGATAGACCGTTAAAAA ATTTCTTCGTATGCAAACTACGGATGTGGCAAATCATTCCTTCTACAAGA ATGCAAGTTGATGTATTCGTTCTTTTTATAAAGTTTGACAGAGAATAATT ACTTGTGGTTTTGCTCTTTTGCTCCCTTTTAACCGTTCAGAATTCCCTTT TGACAAATTTGATGCAATGATTgatgttatctttttttctctttcattgC ATCCTGTGTGAGATGtaatcataatttttttgaattagcCCGATATATGC TATTTTATATGAATGGACTCGAATGACATACTggccaaaatataaaaaat ataccgTCAACTTATTTGTAataaatggctgtaacttttgatagaattcg aatcaagttgcggttGTGTGCTCGTTAAatagatattcgtgagtggaata ttatcaagtaaaaaaattgagatttagggcattttccaaacatttttatA TGTACTTAATGGTCAATGGTTCTTCGTCGTTGCTCAAGATTTTCAGAAAC ACACCATATATTTACATATACACgaacgtccaaagttttgaagcgttcgg atgttcttaacattttgagttttaagcctaaaaatgttcttagcatgttc ttattttcgtcatttttgataactttgtcCATTTGCCTataaaattgggt gttttacaGTCCGCGAAGCCTAacattcttaacttgttcctaacattttg gtcatcgaagccttatgtatgttcttatatagttttagAAAGTTTTAGTC AAGTAGATCAGCTAATTTGACATTGAATTATGTCACTAATATGTGAAAAT AGTCAATATAGGAGATTTTTGTCctgaaaaagaaacattttcaatCCATT CGGCTCTTTCCTCTGTGAAAACTTACCTTTATGCCTAATCATGATATTTG TAGAAATTGTTCGCAGTGTTCTTTATCGGCaagtatttttctttctgttt acaGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACTGA GTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATCAT atttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGGAA AGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCA ATCAGCATTCTGTAATCTATCGTTACTTTTATTTGTTTCTTGATTTATAG GGGAATACAAGCATTGCTACGGATGAGAAACAGCTGAGGGCTAAAAAGGA ATCTTAAGATACCTTGGATTTCGGCTTATAGATTTAATCTAGAGCCTTTT TTATTTATGTACACATTTTCAAGAGGATAGGACCTTCGCCTCTAGCCTAT GGCTATATCTCACCGATTATTACAATATATTTCGGTCGATTTTATCTTAT CTCAGATGGTAAATCTTGAGAAGTGATAAACTTCATTCCCTAGCTTACGT TCACTTAAAGTTTTAACTAACATCAATGGTTCCCTGTTTATCCTAGTAGA AAGGTCAAATTCTTATCTCAAAATTCCCATTTTCAGTATCTGTCTATGTT GATTTAAGAGTGCACAGTGTTAAACCTTTTGAAATGCACTTTGCATCTGT ATAGAAAATGAAAGATTGCTGTCACACCCATTACTTCGTGAGCTTTCCAG TTTATGattcttgaaaatgttttagATTGAGATCTTTCAAAAGAGCATAA CCGAGTTGCAACTACCTGAATCTTCTTACATGACTGCTCAATTGATGGAC TTTGAAACTGGTGACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTT CTCTGGTGATACGCTGAAAAACCCTAATATAAAGGTACTTACTATATaga tattttccttttttatgaGCAAAGGTCATGAAACTAGGCATATCTTATGA GCACTAGAATTAATCTCGTTTCGATAGCCTTGATTCACTTGATTATattt tgataactgaaaattaattcacgTAGGAATAGGAAAACAGCTCAGACCTA CTTATCGAGGATATCTTGGTCGGATTATGATTCAAATCTATAGAGTTTTT GTCTACAATTAAGTAATAAATAATCTTTTAATTATGTCTTCAAATTCTTC ATGCAACAGAATTCTGGCtggaaaacttttttcgctaCCCAATGCTTTTG ATTTGAAACccaattagaattttttttcgtaaAAAATGATATCAAACATG AGGAACTTATGCATCTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTA TAATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatat attttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGG TGTGGATTTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTT GGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATA AACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTT AAATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGT GAAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaa ttctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAA GCAAATCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGTgtca ccgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTCT GTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAA ACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGAA AGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTC ATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTATG AGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAG CTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTTT CAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATG GAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTC ACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattgat ttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGCG GGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTT GACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagttat agaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCAG GGGAGCCAGGGGGNTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTAT AATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatata ttttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGT GTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTG GCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAA ACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTA AATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGTG AAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaat tctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAG CAAAGTCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGGTgtc accgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTC TGTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAA AACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGA AAGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGT CATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTAT GAGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAA GCTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTT TCAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAAT GGAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGT CACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattga tttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGC GGGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGT TGACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagtta tagaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCA GGGGAGCCAGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccaatattttgcaaag tattttttttttactttagaaaatcttatatataccgtttagaggggtga aataagggtaaaaagtcgaaaattttcttcgtcgcccatccggtgggcga catttttttttggccccctcaattcgatttgcacgccgggggccatgcTA TGAAAATTGGTttacatcaaaaaatttctgCACAAAACCTCTTTTTGTTG TAAAAAACTTAGTTAATAATCGGTATCTTGACAAATTAATTCTGAAGACC AAATTATTTTAAAGTCACAGTCTtgtcaaaatataattttgtgaTATTTC TTTTTATAGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCAGAA AGTGGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGC ATTAAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAATAGA ATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTC ccatttcaattttgtttgtgtttacctttaaaaggtaacatttttaaatt gtttttgtttcatttagaaatattttaagactgtttttcgATATGAGTAT TAAGTTTCTATGATATGATTGAAATGACATTTTAGTCCATTTATGACGTT GATGTTTGACAAAGCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATG AGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAAAGATCACGTGATTATA CGCCTGACTATAAAATAAGATTTTATATGATAATATAATTATTAATTGGA CATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGG GGatgtaccgggtgcgccaaGAAAAAGTATACAAAGTGTACAGTATAGTA GGCCTGATTGGTGCTAAAAAAGTTTCTTGGTTAAAATAGTGCAAATTTGG AAATCGAATAACTCCCGCTCAGTACAGAAATCGGCCATTATCGTCTTCTA TAGTCTCCTATATTATTCTTCGAAAGCTTTAATTGGTTTTGGCCTAAagt gagtttgaaatttccgaAAAAAGATTAGACTCTTGGGTTGTAGCCTGGTT TTCACGAAATGGGTCAGGAAATAACGGCTATacccttttttggacctacc ccggtggggtggaggtcctataaattaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032799XLOC_032799Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051797-exon-scaffold_205-1491911889:24202..24507TCONS_00051797-exon-scaffold_205-1491911889:24202..24507Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1510915933:24202..24507TCONS_00051797-exon-scaffold_205-1510915933:24202..24507Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1575043694:24202..24507TCONS_00051797-exon-scaffold_205-1575043694:24202..24507Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1491911889:30956..31162TCONS_00051797-exon-scaffold_205-1491911889:30956..31162Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1510915933:30956..31162TCONS_00051797-exon-scaffold_205-1510915933:30956..31162Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1575043694:30956..31162TCONS_00051797-exon-scaffold_205-1575043694:30956..31162Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1491911889:31677..31835TCONS_00051797-exon-scaffold_205-1491911889:31677..31835Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1510915933:31677..31835TCONS_00051797-exon-scaffold_205-1510915933:31677..31835Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1575043694:31677..31835TCONS_00051797-exon-scaffold_205-1575043694:31677..31835Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1491911889:33566..33718TCONS_00051797-exon-scaffold_205-1491911889:33566..33718Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1510915933:33566..33718TCONS_00051797-exon-scaffold_205-1510915933:33566..33718Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1575043694:33566..33718TCONS_00051797-exon-scaffold_205-1575043694:33566..33718Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1491911889:37061..37930TCONS_00051797-exon-scaffold_205-1491911889:37061..37930Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1510915933:37061..37930TCONS_00051797-exon-scaffold_205-1510915933:37061..37930Clytia hemisphaericaexon
TCONS_00051797-exon-scaffold_205-1575043694:37061..37930TCONS_00051797-exon-scaffold_205-1575043694:37061..37930Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:24202..37930 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0319914 0.107134 0.357477 0.845353 0.412452 0.70179 0.627011 0 0.575016 0.363973 0.354596 0.173922 0.221485 0.048818 0.184854 0.0517805 0 0.166696 0 0.409621 0 0 0.910835 0.6817 0.0618864 0 0 0.0958734
Blast
BLAST of TCONS_00051797 vs. Swiss-Prot (Human)
Match: MANBA (Beta-mannosidase OS=Homo sapiens GN=MANBA PE=2 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 2.198e-35
Identity = 88/282 (31.21%), Postives = 148/282 (52.48%), Query Frame = 1
Query:   40 GNMEIEAFVRQHFELPRSSKNTTLYLSMMVYLSQIVQSLCIKYESEHYRRLQDTLIDGKGHTMGALYWQLNDIWPGPSWSSLEYNGQWKILHYDVEKFFAPTSLSAYRNKDSIVVNIVRDHISNEKKLLCNISFHDWKEFGILWNKTWLLDLSSNQHSIEIFQKSITELQLPESSYMTAQ--LMDFETGDVVSSTELFLSNFSGDTLKNPNIKWRIDRTQ----RKENGVEFDVILSLDAPSAFVWLDTPN-RGRFRENGILINTPTRRISFLSYHEKSNNQ 864
            GN ++      HF+LP+S+     +    +YL+Q++Q+ C+K E+E YRR +  ++D +GHTMGALYWQLNDIW  PSW+SLEY G+WK+LHY  + FFAP     + N+++  +  V D + ++  +  ++  H W     + ++     +     ++ ++++ ++EL L      T +  ++ F     +S+    LS  +   L +P     + + Q      + G  F   L   A + FVWLD  +  GRF +NG L+   TR I F  +   S N+
Sbjct:  591 GNKQMLYQAGLHFKLPQSTDPLRTFKDT-IYLTQVMQAQCVKTETEFYRRSRSEIVDQQGHTMGALYWQLNDIWQAPSWASLEYGGKWKMLHYFAQNFFAPLLPVGFENENTFYIYGVSD-LHSDYSMTLSVRVHTWSSLEPVCSRVTERFVMKGGEAVCLYEEPVSEL-LRRCGNCTRESCVVSF----YLSADHELLSPTNYHFLSSPKEAVGLCKAQITAIISQQGDIFVFDLETSAVAPFVWLDVGSIPGRFSDNGFLMTEKTRTILFYPWEPTSKNE 865          
The following BLAST results are available for this feature:
BLAST of TCONS_00051797 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MANBA2.198e-3531.21Beta-mannosidase OS=Homo sapiens GN=MANBA PE=2 SV=... [more]
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