TCONS_00052819 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052819
Unique NameTCONS_00052819
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length700

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052819 ID=TCONS_00052819|Name=TCONS_00052819|organism=Clytia hemisphaerica|type=transcript|length=700bp
GCGACTTGACATaagggagtttgacatagtctGAGAAAAAAGAGCTACAT
GCACTAAAAAATGGTGTAAATGCCAGGCTATTGAACCGCGAATTTTTGAC
TACATTCAAAATTCGTATTTTTTGGCCCTTACAAATTTCTggatcatttt
gaaatttattttcaatcccTGTAACAAATACTGACTCTCTCACAGCAACA
TAAGCTATCAACTGATCAAGAGTACAGCACCATCAAATTAAATCTCCAAA
CATTCAACATAAAAAAGCCTCAATATATCAATAGCAAAATGGCTGAACGA
AAAAGTATGTTACAGAAAGGTGGATACAGAGAGCCGCTGTCTCCCATCTC
TTTGAGTCAAGCAGCTTCACGAACACCAATGCGTAAGAAGACCTCCAACA
TGACTGCTAAAACACCAACAGCAAAGACACCTTTAGCTAAAACACCTGGT
AAAAAAGGAACATCAATTAGTAGTTCATCTTCTGATTATGATCGTTTCAT
CCCAAATCGTGCTTTGATGAACAATAAGCTTGGCCATCATATGTTGatga
agttgaaaaaaaatgaagaaacggAAGATGGTGTGGATAAAGAGGACTTT
ACAGAAGCGATGCGACAAAACTTGAACGGTGAAATCGAAAAAACTGGTGC
ACGAATTCTTCAAATGAAGATTAAAGCTCCTCAAACTAAAGAAGGTGATT
Run BLAST on NCBI

protein sequence of TCONS_00052819-protein

>TCONS_00052819-protein ID=TCONS_00052819-protein|Name=TCONS_00052819-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
MAERKSMLQKGGYREPLSPISLSQAASRTPMRKKTSNMTAKTPTAKTPLA
KTPGKKGTSISSSSSDYDRFIPNRALMNNKLGHHMLMKLKKNEETEDGVD
KEDFTEAMRQNLNGEIEKTGARILQMKIKAPQTKEGD
Run BLAST on NCBI

transcript from alignment at scaffold_220:508443..520154+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052819 ID=TCONS_00052819|Name=TCONS_00052819|organism=Clytia hemisphaerica|type=transcript|length=11712bp|location=Sequence derived from alignment at scaffold_220:508443..520154+ (Clytia hemisphaerica)
GCGACTTGACATaagggagtttgacatagtctGAGAAAAAAGAGCTACAT GCACTAAAAAATGGTGTAAATGCCAGGCTATTGAACCGCGAATTTTTGAC TACATTCAAAATTCGTATTTTTTGGCCCTTACAAATTTCTggatcatttt gaaatttattttcaatcccTGTAACAAATACTGACTCTCTCACAGCAACA TAAGCTATCAACTGATCAAGAGTACAGCACCATCAAATTAAATCTCCAAA CATTCAACATAAAAAAGGTATATCGTGTTAAATAAAATAGCCCAGGCAAA GAGCATTCATGATCCTCTTTTTTTTGTGTTCAACAAAATGTGGCATATCC GAAGGTTCTAAGCTAGTAGTTAGTATAATTTTGACTTTGNACAAAATGTG GCATATCCGAAGGTTCTAAGCTAGTAGTTAGTATAATTTTGACTTTGATG TACCGtgagaaagggtaacttgcatcagtggaggctaacatgcatagccc tcaaatgaatgacctggctggtcattaaaatacacatacgtagctccgct cgcagctctactctaccatatttttgtttcaatttattttcgtattttaa tgaccagccgggcctttcatttgagggctatgcatgttagcctccactga tgcaagttaccctttttcacggtatacTATTGGCTTAGTTGTTACAAACA AACTCAGTCAGTAAAAACATGTTCGCTTATgttatccagacggtgtcaat cgaacgaatcgaacgccgaatcaatcgaacgcaattgaacgcaatcgaat aattgcaattcgattgtcgaacgcaatcgaatcgcaatcgaatattaccc aggatttgctgttcgattgcttcgattacattcgattgtattcgattacg tacgattgattcaattgtattagattttattcgctttagtgtggtactta agcgctcggccgcccacactaagaagctctaacagagtgatccaatttaa tttaatcgtaatcaaactcatcgtacataatcgtaatcgaacgatatcga agattaatccaatgtaattgacaatcaatcgaaccaatcgaacatagtca acaatcANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNacgttcgacaatcgaatcgcaattattcgatcgcgttcg attacgtttgattggttcgattgcgatttttgttcgaagttgttcgattg acaccgtctggttatgTTATGCCGAAGACTTTTCGTATTCCCAagccaat aaaaatatttttagctatcatcaaaggcaaaaataataacatctaCGTTA TTCTCAAGAgcaattaaaaatgacaaactttttttctttgtttgtaaCGC ATTATTTCATCAAACAATCAGAAACAACAAATTGTTGTTTTAATTGCAAG AGAGAATACTAGACAGATGATTGATGCAATAAAACGAGCCGCAGCAACGG GATTTCATTTGTCTGCAATAAGGCGTTTGTAAAAATAAGTGTAGTGAAAA CTCGTTAAACGGAGGTTAGACATCACGTCTGACACTCTGTTGGCTAGCAT ATGTGTGTCATgtttccagacggtgtcaatcaaacgaatcgaacgccgaa tcaatcgaacgcaattgaacgcaatcgaataattgcaatttgattgtcga acgcaatcgaatggcaatcgaatattacccaggatttgctgttcgattgc ttcgattacgttcgattgtattcgattacattcgattgattcaattgtat tagattttatttgctttagtatggtacttaagcgctcggccgcccacgct aagaagctctaacagagtgatccaatttaatttaatcgcaatcaaactca tcgtacataatcgtaatcgaacgatatcgaagattaatccaatgtaattg acaatcaatcgaaccaatcgaacatagtcaacaatcaatcgaaccaatca aaccttactcgaacgcaatcgaatattacccaggatttgctgttcgattg cttcgattacgttcgattgtattcgataacattcgattgattcaattgta ttagattttatttgctttagtatggtacttaagcgctcggccgcccacgc taagaagctctaacagagtgatccaatttaatttaatcgcaatcaaactc atcgtacataatcgtaatcgaacgatatcgaagattaatccaatgtaatt gacaatcaatcgaaccaatcgaacatagtcaacaatcaatcgaaccaatc aaaccttactcgaacgcaatcgaatattacccaggaatcggccgtttgat tgagattcgattacgttcgacaatcgaatcgcaattattcgatcgcgttc gattacgttcgattggttcgattgcgatttttgttcgaagttgttcgatt gacaccgtctggatgtTTCTGCCAAgccccccttaaaataaggggggaat attgccttttgaaaaagggaggatttttgtaatttctttttaaataagtg GGGAATTTTATCAAGGGCTGCGCAAGAATCtatcaaatcaagaaaaaggg ggaactaaaatttgaaaattgttgaTTGGATTGCAAATTTCTGTTTCTGG TTTTATTGATAATGGAAATACCCAGGGGCtgaggggatgtcaatcgaact caatcgaattcGCTTTGGAGTCGAATCGATCAAATTCAATCGAAGtaaat cgaagtgattgttcgaatcaatcgaactcgatcgaagtgattgatcaaac aatcgaattcaatcaaaatggaaaaaagatGTAAATCTTCAATCGTCTTC GATTGGATTTGATCTATTATTCGATCAATCACTTCAATTGAGTTCGATTG ATTTGAACAATCACTTTGATTTACTTCGCTCGATTGATTTGATCACACAT GGTGTTTTCTTGTTCGGGCTTTTCATTAGTCTACTAACTAAAaaggatgt caatcgaaaatgTCGAATATAATCGAgaccaatcgaagtgattgaccgaa tcaatcgaagccaatcgagtacaatcaaaccaaatcaatcttaaaatgat gtaaatcttcgattgacttcaattTTTTCGATCGATCACTTCGATTGATC ACTTCGATTGGCTTCGATTTGGTCAATcagttcgattggtttcgattata tttgattggttcgacaatcGAAATTTTCGATTGACTTCCCCTGGAAATAC TATTATACCAAGACAAGTACAagggcagttagtcacactagcgtcccacc aaaatgtgtatcaaagataaatgctgtgaaagcgctatatcgtttacttg actcgcaagcaaaaaaatgcgccgcaaaacttctaaagggattcatgaat aaaaaataacccggcactttttaatgaaattaacattttcaaaaacaatg agAAATTGCTTATATAAAacttgagccatagatgaaaaaatttgaaccaa gccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagatcta cgggggagacagAACCCACCTAGATTCGCGCACCACCAGATAGGCTATTT CTCAGAAATTTTGCTGGACCTCAAACattgacccatttacatgtgcggaa ttatttttacggaattgaatgacaaaatttggttggttgatattctggtt GTTGCACGTTTGCAATCGGTTATTTTGTCTGATTTAAAggtttcaagttt taattaattgtcttgggaacttgaacttgattcaggtaactctcatcctt gttgttgcaaatacatcctgtagatgatactgatattgtttttttctgaa agcttgatttcctagtgtgactaactgaaggAATACTGGTAATTTTGTTC AATTTAAGGGAGGAGTTTTTGTTAAgggcaaaattgcattttaagggGGA ACTGAAAAAGTAGGCAGAAACCATTTGTGTGTGGGGCACCATGTTTTTTA TCTATGGGAGTGTTTTAAACGACGTCGGGCTCAATAGGATCGATAATCGG AACGGATCAACTTGCTTGATTTAGATACTAAGGGATCAACAGTATAGCCC TAActcttcatataaaatttacggGAAaggcatatttggactttgtaccc aatgCTGCACACAAGCACTACTTGCTAAAGTCCTACAATACATATAGGat aaaagtcagttttttgaagtttgcaaaaaaacgccacataaaagatcttt caaattcagtacaGTATGTGAATAGACAGCTTTGGAAATACTGTGTGTTT TGTATTTGATAGTGTACAATAAACTCGCATTCTTTTTACGCCCCCCTGAC AGCTGACAATTAGGCTATGgataaatttacattttttctctttcCTATTC TAGCAATGAAATGCTTCCATAGTTGACACATAATACACATTGACAGAAGT ATTCCCCATGTAatgtttatattgaaatctgcaataacgaaagtggtctc ttcttctCAGTGGCTCGTAAGTCGCTCCATCggaaagtcttttttaaatt tcatccaATGAGATTACCACGTAGGATTAAGGTAATGACTGGCCCTAATT TTTGGCGCTAATGGCTTTTTGGTTCCTTGGATGTCGAGCAGTCatataac tttatttttttcaatcgtTGATTCTAAggattgaattttttcttatctta aGTTCTCAAACGActgcgggaatttgatgcaagtattattttttcaaaga atcttttCTGATTGGATTGGataattctttttaaacaatTGCACAGCTAT TCTTCGGttggacaaaataaaacaatcgaTATTGCCGAGTTTGGATAGTA AAATATTTGGTACTTTCACAAGTGTTTgcaattgaacaaaaaataaaaca atttataTTTTCCAGGGGtgaatttttaagtttttcttctaATTCTTCAT GTTCGCCAATCCCCCAGTCTTCATAATATATACCATGGTAGGAAAGTTCA TGAAACTTAATTTTGAGTTTGGCAACTCCCCAAGATTGGCAAACAATCAT TTTTTCCCACTAATGGCTTttctcttttatcttttattggtttcttttgt tggTTTTTTACGTCACTATTGACTTGTGCACCATTTCTTGAAATGAAAAC Acactgtatttcccaagctgatagagcagtaaaaaatacaaattttgcag gtatttttcctttttttgcaaaagttgcagaaatgaaaataatgttaatt gaatactatccactgatgatccccAGCACTATCagaaagctagaatcgct ttgcgtactattcgcttgagaaaaattatgaaaaatactaATAAGCTTTG GACTTTCCAACATCCCTCTGGAACTAAATCCCAAATAGACTATGTCCTTG TCCGAAATAAATGGAAAAACAGTGTCANNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGG CTCGAGTTAGAAGAACTGAAAACAGTTATGTCAGACCGTGAGCTGTGGAA AGAGAGATACTCGGTATTTCCGACCTAacggtcgaaggatgatgatgaga AAAAGATTGacatattaaaattttttcactcATGTGGGAGCTTACTAGCA TTAAGCCTGGTTGGCTTTTTTaactcggctcaatcctcaaaTCAAACTGC ACAAAATGGTTGAACTTTTGCGGCTGATCATttcaatggaagttgttgga atcttccttcttgacagaaaatcctttgtttaaTTGTCAAATGATCATAG TTacttttgttagatctgacaaattgatgttagTGAGTGCACTTTATACc ctatagttttgattcccattgaagaattaTACTCTGGTTTTCATGTAACT AAATGCTGTTtcagagctttagagctagcctgtcaTTTTTGCAAAGTNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattat ttgttaggttaatctaattgtgttatcatttgataacacatgataatcga gccccattccattctctttataaaacataaaacttattAACACAATTATA GAGCAGCTAAATTTGTTAGTACttctttgccgacctaaacaagctactta ggacggctttgccgacctaaaatgacctctaggtcggcaaaatttccggT TTTGGTCTGCACTTACGTGCTGAtatgattttgtctgaattcacaGGGCT GCGTCTATGGTCTTGATATTCTTGATCACAAAAcaagatgtttttcaatt tgaattgattttggtgagtcACCCCCACGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNccccccccccccctcaagcataaaatgttAGTATTCA TTAATAGAAAAAAGGtgttgagaaaataaaaaaagataacttAACTACTC GAACCGTCTATGGTCTTGATATTCTTGATCACAACATCATCTCATAAAAc aagatgtttttcaatttaaattgattttggtgagttccccccatgcctag aatgaaaattttccatccccccCTCCTTTTCCCCCACCCTGGCTTCTTTT TGACCTCAAAACTCAttcccccctgaatccaggggggggaggacactatg aacgACCCGATGTCGTTAACCTTTTGTCCAGGGCCCTTTAGTTACTTCAT TCTTAAGATTGTATGTATATGTGGTCTGATATTGATAGGTTATCACTTCC AgactgaaaaaattctttgagaTGTTGGTAAAATTATTGTCAACAAGTGT TTTGTTTGATTTGGGGGCGTTATTCTTGTTGGTGTAGAGACGCATTCCTC CCTATTTTGATTTAGTTGGGGGTGTAGCCAAAGATTAAAGGATTTCGAGG GTTTTTTGTGAAGCCAGCTTCAGAAACTCCTTTGAAATTAAGTTCTATAT CACAAATTTTTACAAGTGTTCTAAGTTCTTCCACCTTGTGTAGGTTAAAA GAAGCGATCCTCAAACGCATTAGAGATAGATACTGAGAATTCTCAATGTT GAAATCATTTGTTGCCTTTGGAACAGAATCATCTAGGGAAGGGTCATTAC TGTCCATGGGTTACAAGGATATATTATTAGGTGGGACTTTCAGtcctttc aaaaatcaaaatcgaagtGTACATTTTCAGACAATGACATAGctatattt tcaattaataaTAAANCTTTGAGATGTTGGTAAAATTATTGTCAACAAGT GTTTTGTTTGATTTGGGGCGTTATTCTTGTTGGACTTAGAGCAGCTAGAA AAGTTAGAAttaacaaaaatctgcttatcTTTTCATGGGATTCATATCTC AGTAGGTTGATGTTAAAGTCATTCATAATTTACAAAAAGCCTGTTTGTTT TATTCCGAAATTGTTTTCCAATAGTTTGGAGTAAAGAACATTGAATTATG CGCTATCtatattaaagtctgtctcaaaataatttgcagctgagacaaaa atggctgtaacttttgatagaattcaaatCAAGTTGTGATTTTGtgctca ttttttcaaaaatattcattcaatcaaaagatatcaaacaaaaattattg ctagttgactctataaagtagtagaaaacgacaaaaaacagcCTTAATTG TCAATCAACCAATAACAAACTTTGTatgatattttttgattgaatgaata tttttgacaatttttttcacagtgatgatagTCAAAGATTTAAGAATCag tcctgtgaaaatggtaattataccacaattctacaaaaggttgattttta gcttcttgatttttcattttcatgtttccttaattttcaatttttttttt tttgataatattccagtCACAAATAccggtgcgccacaaaaaagtttctc tctttaaaactaactttctagaaatctaaacatttcaaaagaaccattcc tattttattggaaagaagaaggataaacctaaattttgatgggttattta ttaaaatttgattcattagatcaaaagttatcctcaattgaataaaatgc tactttcagaaagtgctcgaaaacgttaaaaatcgacctattaaattttt actttaaatttggcaatcgcaatagccttctttgattaaaagcatttttt agTAATCAAACACATAAATTTCGAAACTGAAAGGCCGAataggtttaaaa tcttcatcaaaatcactttaatttacttttaccgaaattctcCTCCGATT TTTGGTTTTAGATTGGATAAAGTCTACGTAAGGCTGGATAtatctcgaaa cccatatttgatgtatttttatgaattttaccagatttttttgccttttt cgacaaattttctgccttttattgaaattcaaccttcctttatacaacaa aaggtcatttagacagctaattatcatttttgatgactgaaacgaagata atgatgtatcatgtaattatgcttccgtttaatttgataggtcgattttt aacgtttttgaggactttctgaaaataacttttttattcaattgaggata acttttgatataatgaatcaaatttaataaatgacccatcaaaatctaag tttatctttcttctttccaatgaaatcagaacggttttttaaaaattttt agatttcgagaaaattagttttgaagagagaaacttttttgtggctcACC CGGTATCTTTTCAACTAACACAAAATTGCAACttcattcaaattctatca gaagttacagccatttttgtctcagctgcaatattttgagacagacttta ggcATTCCTCCCTATTTTGATTTAGTTGGGGGTGTAGCTAAAGATTAAAG GATTTCGAAGATTTTTTGTGAAGCCAGTTTCAGAAACTCCTTTGAAATTA AATTCTATATCACAAATTTTTACAAGTGTTCTAAGTTCTTCCACCTTGTG TAGGTTAAAAGAAGCGATCCTCAAACGCATTAGAGATAGAGACTGAGAAT TGTCAATGTTGAAATTTGTTGCCTTTGGAACAGAATCATCTAGGGGAGGG TCATTACTGTCCATGGGTTACAAGGATATTTATTAGGTGGGACTTTCAGt cctttcaaaaatcaaaatcgaagtGTACATTTTCAGACAATGACATAGct atattttcaattaataataaaatttgtgatcgactGACAAATGATACAAA AACGTTTAATTTtaggtttcaaaatttttaggttTGGACTTCGAATTATC AAAAATCCTGAAATTTATAAATTATGAATACCGACAGATTTTGTATCAGT CAGCTGGAAAATTTTAGTGTTGGAGAATGTGCACACGTCTTAAAGTTTGC CTTTACTGGTATTTCGACTTTTAGCTAAAATAAGATacaaaaggagaaaa attataNCTTTAGACAGCCACCTTTAGTTTCCGATTTTGTCCGaatctta aaaattttcttttaaaagatcaACTACTTTTCTGCCGCCCTAAATTTTAG CAATAGAATTATTTATCATTGGAAATTTACTTGTTTGttaatcttttttg aaaatcatatTTTACGTTTTTGGCCTGCTCTTACACTGCTAATGtctatt tttaatgaaaagctGATCTGATCCCAATGTGTAGATGTAACTCTAATTAT CCTTTTTTTTCAGCCTCAATATATCAATAGCAAAATGGCTGAACGAAAAA GTATGTTACAGAAAGGTGGATACAGAGAGCCGCTGTCTCCCATCTCTTTG AGTCAAGCAGCTTCACGAACACCAATGCGTAAGAAGACCTCCAACATGAC TGCTAAAACACCAACAGCAAAGACACCTTTAGCTAAAACACCTGGTAAAA AAGGAACATCAATTAGTAGTTCATCTTCTGATTATGATCGTTTCATCCCA AATCGTGCTTTGATGAACAATAAGGTATGTGTACAGGTTTTTTTTAATAG agaaccttaacttggctccgagcctggagttccttatttttcaaGAGAAT TTCAGCTTTAAAGTTCCTTATCGTGTTCTTTATTGACTTGGTTGCTAAAA TTGGAGTTGCTATGTATGTAACTAATGTATAAGTGGGTAAGTCGTTTTTA GCCTAGGTTTTCTGATAGTATATCTAAAAGTTGGAAACACAGCCAGGGAT ATTcaaaaataacagaaaaattTAATTCTCCAATTTTCAGCTTGGCCATC ATATGTTGatgaagttgaaaaaaaatgaagaaacggAAGATGGTGTGGAT AAAGAGGACTTTACAGAAGCGATGCGACAAAACTTGAACGGTGAAATCGA AAAAACTGGTGCACGAATTCTTCAAATGAAGATTAAAGCTCCTCAAACTA AAGAAGGTGATT

Coding sequence (CDS) from alignment at scaffold_220:508443..520154+

>TCONS_00052819 ID=TCONS_00052819|Name=TCONS_00052819|organism=Clytia hemisphaerica|type=CDS|length=822bp|location=Sequence derived from alignment at scaffold_220:508443..520154+ (Clytia hemisphaerica)
ATGGCTGAACGAAAAAGTATGTTACAGAAAGGTGGATACAGAGAGCCGCT
GTCTCCCATCTCTTTGAGTCAAGCAGCTTCACGAACACCAATGCGTAAGA
AGACCTCCAACATGACTGCTAAAACACCAACAGCAAAGACACCTTTAGCT
AAAACACCTGGTAAAAAAGGAACATCAATTAGTAGTTCATCTTCTGATTA
TGATCGTTTCATCCCAAATCGTGCTTTGATGAACAATAAGCTTGGCCATC
ATATGTTGatgaagttgaaaaaaaatgaagaaacggAAGATGGTGTGGAT
AAAGAGGACTTTACAGAAGCGATGCGACAAAACTTGAACGGTGAAATCGA
AAAAACTGGTGCACGAATTCTTCAAATGAAGATTAAAGCTCCTCAAACTA
AAGAAGGTGATATGGCTGAACGAAAAAGTATGTTACAGAAAGGTGGATAC
AGAGAGCCGCTGTCTCCCATCTCTTTGAGTCAAGCAGCTTCACGAACACC
AATGCGTAAGAAGACCTCCAACATGACTGCTAAAACACCAACAGCAAAGA
CACCTTTAGCTAAAACACCTGGTAAAAAAGGAACATCAATTAGTAGTTCA
TCTTCTGATTATGATCGTTTCATCCCAAATCGTGCTTTGATGAACAATAA
GCTTGGCCATCATATGTTGatgaagttgaaaaaaaatgaagaaacggAAG
ATGGTGTGGATAAAGAGGACTTTACAGAAGCGATGCGACAAAACTTGAAC
GGTGAAATCGAAAAAACTGGTGCACGAATTCTTCAAATGAAGATTAAAGC
TCCTCAAACTAAAGAAGGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033381XLOC_033381Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052819-proteinTCONS_00052819-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052819-exon-scaffold_220-1491911889:508443..508709TCONS_00052819-exon-scaffold_220-1491911889:508443..508709Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1510915933:508443..508709TCONS_00052819-exon-scaffold_220-1510915933:508443..508709Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1575043694:508443..508709TCONS_00052819-exon-scaffold_220-1575043694:508443..508709Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1491911889:519456..519716TCONS_00052819-exon-scaffold_220-1491911889:519456..519716Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1510915933:519456..519716TCONS_00052819-exon-scaffold_220-1510915933:519456..519716Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1575043694:519456..519716TCONS_00052819-exon-scaffold_220-1575043694:519456..519716Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1491911889:519983..520154TCONS_00052819-exon-scaffold_220-1491911889:519983..520154Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1510915933:519983..520154TCONS_00052819-exon-scaffold_220-1510915933:519983..520154Clytia hemisphaericaexon
TCONS_00052819-exon-scaffold_220-1575043694:519983..520154TCONS_00052819-exon-scaffold_220-1575043694:519983..520154Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:508443..520154 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.6573 17.026 50.1417 50.1922 18.319 15.5336 15.3941 18.6113 8.81253 10.8344 8.52336 6.94134 7.06129 6.95351 10.8719 13.4678 12.1928 12.2681 2.94145 3.12404 7.01507 5.86829 14.5528 13.6039 13.5943 10.2743 5.78874 2.96319 10.6456 11.6819
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052819 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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