TCONS_00053348 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00053348
Unique Name	TCONS_00053348
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1635

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_228:701500..705752-
coding sequence from alignment at scaffold_228:701500..705752-

transcript sequence

>TCONS_00053348 ID=TCONS_00053348|Name=TCONS_00053348|organism=Clytia hemisphaerica|type=transcript|length=1635bp
aaacttttgaCTTTAACTGAGTAAAAAGTTGTCTGCAATCTTTCTTTGAT
CTGTGTCACTATATTTACTGTTAGTGGTTTGAGAAAGATATGGAGAAACT
ACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTTCTGTCTTTAATTTTC
TAAGATATCTGGAAGTGGACTCTCGATTTAACAGATTGGAGTTAGAAAAT
TGGAGTAAGGATGTGGTAAAAGACAGATCTCGACGTGATGCTCCAAAGAT
GCTGGATGAAAATGTACAAAACATTTTATCAAGTATTGAAACCTTAACTG
ATTTCGTTCAAAAGCAATCGAATGAAACATTCAATGGAGAAATCAATCAA
GCTTTGGAAAAATTCTTCATGCAATTCCCTACGAAAAACATTTGTAAACA
ATTCGTAACCCAGTGTGGCTGTAAAGaaaaatgcaccACTATTGACAAGG
ATTCCAGCGATGTAAAATCAACAGCTAAATTCATTCGTGGACCACCGGGT
CCTCCAGGACCAAGAGGATTAAGCCTAGAACCACCACGATTGATCAAAAG
CTCACTTGATGACCGAATTGTTAATCTAACTGATTCAACAACATTCGAAT
GTTCTTTTTCTGGAAACCCATTGCCTGAAATTTCTTGGAAAAGTTCAGCT
AAAAACGCTAAAACCATCACTTGGAAGAATAAAGAAAACCTTGAAGTTTC
AAGTCGAATGATCATCTCAAATATTTCATGGAGCGATCAAGGACCGATCG
AATGCCGTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTTTCAGGAAATCTT
CACACATTGTCTCACCCAGTCATAAATACCACAAAAGCATTGGTTTTTGC
ACCACAAGGAGTTGATTTCCACTTCCCTTTGTGTCAAGTACGATCCAATC
CACCTGCCAAAATTACATGGAAAAGAATATTCTGGTCATTACCAGCCGGT
CGCTTTCATATCCGAGAAAaagagttgcttataaaagatgtaCGATATTC
AGATGAAGGGTTCTATGTCTGTGAAGCTGAAAACATGCTTGGTAAAGCTC
AAATGACAGTCCAATTGAAAATACGTTCGTTGGAATTGCAATCGTCCTCA
CCTTCATTCATCCAAACTACAAAAAATGTTACATCCATCGAATGTTCAGc
atacggaaacacccgaatAATGACCGGGACTATCACGAGATCCGGAATGC
CAATCCCTTCCGTGAGCGAATCTATAAAGGCCAATTTATTAAATGTGAAA
GCTGTAGTATCTGAGAATGGAACATATCTTTGTACTGTCCGAAGTGGAAG
TGAAAAGGTTAACAGTGCAACTGTGGTTAAGATTTTACCTCCCGAGAAAA
CAGAAAAGACAAATCTGAACCCAGAAACCTCCTTACCCTCGATCATAGCT
CTAGCTGGTGACGTTGTCAATATCAGTTGTTTTGCATACGGGAATACTCA
ATATATGAACGGGACGATCACAAATGCGGATGTACCGGTACAGAATGTTA
CCATCATAACGAAAGATGATTTATTTTTGGTGAAGGCACTGGTGGTTGAT
GACGGAACTTTTGTTTGTACCATCCGGAATGAGACAGATGATAAAGTTAT
TGTTGAGAATATTTCACGCGTCATATTCTTGCCTT

Run BLAST on NCBI

protein sequence of TCONS_00053348-protein

>TCONS_00053348-protein ID=TCONS_00053348-protein|Name=TCONS_00053348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MEKLPWLLVLCFGCLSVFNFLRYLEVDSRFNRLELENWSKDVVKDRSRRD
APKMLDENVQNILSSIETLTDFVQKQSNETFNGEINQALEKFFMQFPTKN
ICKQFVTQCGCKEKCTTIDKDSSDVKSTAKFIRGPPGPPGPRGLSLEPPR
LIKSSLDDRIVNLTDSTTFECSFSGNPLPEISWKSSAKNAKTITWKNKEN
LEVSSRMIISNISWSDQGPIECRAKSLLGEVSVSGNLHTLSHPVINTTKA
LVFAPQGVDFHFPLCQVRSNPPAKITWKRIFWSLPAGRFHIREKELLIKD
VRYSDEGFYVCEAENMLGKAQMTVQLKIRSLELQSSSPSFIQTTKNVTSI
ECSAYGNTRIMTGTITRSGMPIPSVSESIKANLLNVKAVVSENGTYLCTV
RSGSEKVNSATVVKILPPEKTEKTNLNPETSLPSIIALAGDVVNISCFAY
GNTQYMNGTITNADVPVQNVTIITKDDLFLVKALVVDDGTFVCTIRNETD
DKVIVENISRVIFLP

Run BLAST on NCBI

transcript from alignment at scaffold_228:701500..705752-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00053348 ID=TCONS_00053348|Name=TCONS_00053348|organism=Clytia hemisphaerica|type=transcript|length=4253bp|location=Sequence derived from alignment at scaffold_228:701500..705752- (Clytia hemisphaerica)
AAACTTTTGACTTTAACTGAGTAAAAAGTTGTCTGCAATCTTTCTTTGAT
CTGTGTCACTATATTTACTGTTAGTGGTTTGAGAAAGATATGGAGAAACT
ACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTTCTGTCTTTAATTTTC
TAAGATATCTGGAAGTGGACTCTCGATTTAACAGATTGGAGTTAGAAAAT
TGGAGTAAGGGTATGTCAGTTCACATCGTTTTTCTCTGCGTTTGATAGAT
CTTTAGATAGACTTGTTAAATGTTTAAAAATATTTTTAATTGACTAAATT
TAGAACTTCTGTTTCACAAACCCGCTGGGACCCCCAGGGGGGGGGGGGGC
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCACTAAGGGTCGGAGAAATAGGAA
AATTTCAACTTTTTACCCCCGGAAAGATCGAATTTGGTTAAAAATAGGTC
AAATTAGTCCCAATAAGAGTCGTAAAATTCACAAAATTTTCCTTTCTTTT
CTTCTTTTTAGTCCCGGTAAGGGTCCAAAGGTTGAAAGTCGGGCAGCACC
CCCCGTCAGTTCGCAATCCTAGTACCCCCAGGCTGGGACCCCATCCAGCA
TGACTTTGTTTGTATCCCCATCAAACCCATCATCTCAAAAATTTGCACTC
CAAAAACAATAAAGTATAAGCCCAAAGGGCTAGAAGCGAATCGGATTTGA
AGCCACTGAATCCTACCTAAGTTACACGGCCTTCCGGATTGAAAATAAAA
TTTTACACTAGATTAAAAAAAAAACACTCGAAAACAAAGAAACTGCTAAA
TTCAATCCGTCGTCAAAAAATACGGCGTACATTCTGAGGCTTCACTTTTT
CTTGCCTGAGAAAGGTTGAAGATTCGCATCTAGCCCTTTGAGATTATACT
TCATTACTCCAAAATTATCCCGCTGGATTTTTCGACCTGAGAATAATAGA
ACTTCTATACCCTTTAGAATTATGATAAAAGATTTTCATTCCCACTAGTG
GGAAAATTTCAACCGGGGCTACGAGACAAGGGTGTAAAACAGTAGGTCTC
CTTTACAGAGCACGAAACGGGAACGCAAATTTCATTTATGCATTAATGAA
ATAGATGATGAATTTGTGGTCCACTCGTGGTCCACTTAGCTTTTTTGGTC
GAATACTCTAAAAAGCATTGAATAGTCTTTTTTAATTTTTAAATCTCTCC
TTTTGTAGATGTGGTAAAAGACAGATCTCGACGTGATGCTCCAAAGATGC
TGGATGAAAATGTACAAAACATTTTATCAAGTATTGAAACCTTAACTGAT
TTCGTTCAAAAGCAATCGAATGAAACATTCAATGGAGAAATCAATCAAGC
TTTGGAAAAATTCTTCATGCAATTCCCTACGAAAAACATTTGTAAACAAT
TCGTAACCCAGTGTGGCTGTAAAGGTATTATTGAGTTGTTAGTAATTTAA
ATTCTGAGGATAGAAATATTATATTTAATTCAACTAACCGGTTTGAAATA
TTTTCAGTGAAAAATCTAAATCTCTGAGTTCGTCTGTGCATATCCAGGGA
TATGTTATAATAGCGGAGCGTATTTCCCTATTAGGCATCTCACTTTACAT
ACATAACAAGCATTGGTTTTGTTTACGCCCAAACAAGAAAGCAATTGTGA
TATCATAAATTTCAATATTTTATTTTAGAAAAATGCACCACTATTGACAA
GGATTCCAGCGATGTAAAATCAACAGCTAAATTCATTCGTGGACCACCGG
TAGGTAAAATATATTTTCCAATTTCTGTCAGTAAACAATTCTCATGCACT
CTTGGAAAAGGAGCTTTTGACTCAGACTTAGAGTAATGACTTATTTATTT
CGGTTTCAGGGTCCTCCAGGACCAAGAGGATTAAGCCTAGAACCACCACG
ATTGATCAAAAGCTCACTTGATGACCGAATTGTTAATCTAACTGATTCAA
CAACATTCGAATGTTCTTTTTCTGGAAACCCATTGCCTGAAATTTCTTGG
AAAAGTTCAGCTAAAAACGCTAAAACCATCACTTGGAAGAATAAAGAAAA
CCTTGAAGTTTCAAGTCGAATGATCATCTCAAATATTTCATGGAGCGATC
AAGGACCGATCGAATGCCGTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTT
TCAGGAAATCTTCACACATTGTGTAAGAATTTATCGAAGTCATTTTTATT
CTAAAAATTTTTGTTCCCTCTTTCCAACTGGTAAAATAATCTCCTGACCT
GACTCTCAACTAACATAGGGTTCGCTTTTTGCATGTTCTTAACAGTCGTG
TCATTATTCTTCTTTGTAGCTCACCCAGTCATAAATACCACAAAAGCATT
GGTTTTTGCACCACAAGGAGTTGATTTCCACTTCCCTTTGTGTCAAGTAC
GATCCAATCCACCTGCCAAAATTACATGGAAAAGAATATTCTGGTCATTA
CCAGCCGGTCGCTTTCATATCCGAGAAAAAGAGTTGCTTATAAAAGATGT
ACGATATTCAGATGAAGGGTTCTATGTCTGTGAAGCTGAAAACATGCTTG
GTAAGAACGTTGCTTTATTCCTCAAAACTATATAAAATGTAGAACTTCAG
TACACCTCTGTGTCAAACACCCGTTGGGACCCCCGCGAATAAAAAATTCG
GCTGAAATTTTGCCCCAGTTGGAAATTTACCCCACAATTTCAGTCCCGTT
GGAAAATTAACTTTGTTTTTATTCCCATTTGAAATTCAATAGGAAAAACC
CACTATGGGGGAAGTTCCATTGCTGGGGCTGCAAGACAGAGTTGTTTTAA
TGTCACTGGGTCTTTAAATATGTAGATGTGCTTTATGGCTCTAAGTGACT
CCAACTCTTGCCGCAACAACAAGTCATTGTTTTAAAATGTCGCAGGGTGT
ATTGAATGTTTGATCTCTGACTTCTGTTTGTCTGTTTCCTTTCAAAGGTA
AAGCTCAAATGACAGTCCAATTGAAAATACGTTCGTTGGAATTGCAATCG
TCCTCACCTTCATTCATCCAAACTACAAAAAATGTTACATCCATCGAATG
TTCAGCATACGGAAACACCCGAATAATGACCGGGACTATCACGAGATCCG
GAATGCCAATCCCTTCCGTGAGCGAATCTATAAAGGCCAATTTATTAAAT
GTGAAAGCTGTAGTATCTGAGAATGGAACATATCTTTGTACTGTCCGAAG
TGGAAGTGAAAAGGTTAACAGTGCAACTGTGGTTAAGATTTTACGTAACT
TCTTATTTGGTTTTATTTCATTTCTATATGTTCCCATTACACTCGTTTAT
GCAAAGAAATTTCATTTTTAATTTCATGCCTTACGGGTCACTCTTTTGAA
ATGATGCATTATGTTTTATTTACGTCATCTGGAAAAGATTCTACCTTAAA
ATGTGTACGAACCCTTAGAGGGGGTTTCAGGGGGTATCCGATTCCACAAT
TCCGCACTTCTGCAAAATTTTTTGCTAAATTCTGTTTTTCTGCACTAAAA
TTGTCTAATTTTCCGTCTCCGTCGGAGAACCCAATTTCCGTAATTCCGTC
TAAATTTTCGCCAAATTCCGCCACTCCGTCCGAACAAAGGGCTGATTCCG
CTCCTCCGCCAACCATGAAACCCCCCTACATAGGAGAAGCCTTATCTAGA
AGAGGGGATTATTGAAAATATAAAGCCAGGGCATTGGAGGAGGGAAGGTG
GCCCCAAGCCTTGCGTAGAATCTATAAAAATATCAGCTATCTTACAACTA
TTTCAGCTCCCGAGAAAACAGAAAAGACAAATCTGAACCCAGAAACCTCC
TTACCCTCGATCATAGCTCTAGCTGGTGACGTTGTCAATATCAGTTGTTT
TGCATACGGGAATACTCAATATATGAACGGGACGATCACAAATGCGGATG
TACCGGTACAGAATGTTACCATCATAACGAAAGATGATTTATTTTTGGTG
AAGGCACTGGTGGTTGATGACGGAACTTTTGTTTGTACCATCCGGAATGA
GACAGATGATAAAGTTATTGTTGAGAATATTTCACGCGTCATATTCTTGC
CTT

Coding sequence (CDS) from alignment at scaffold_228:701500..705752-

>TCONS_00053348 ID=TCONS_00053348|Name=TCONS_00053348|organism=Clytia hemisphaerica|type=CDS|length=10815bp|location=Sequence derived from alignment at scaffold_228:701500..705752- (Clytia hemisphaerica)
CTCCCGAGAAAACAGAAAAGACAAATCTGAACCCAGAAACCTCCTTACCC
TCGATCATAGCTCTAGCTGGTGACGTTGTCAATATCAGTTGTTTTGCATA
CGGGAATACTCAATATATGAACGGGACGATCACAAATGCGGATGTACCGG
TACAGAATGTTACCATCATAACGAAAGATGATTTATTTTTGGTGAAGGCA
CTGGTGGTTGATGACGGAACTTTTGTTTGTACCATCCGGAATGAGACAGA
TGATAAAGTTATTGTTGAGAATATTTCACGCGTCATATTCTTGCCTGTAA
AGCTCAAATGACAGTCCAATTGAAAATACGTTCGTTGGAATTGCAATCGT
CCTCACCTTCATTCATCCAAACTACAAAAAATGTTACATCCATCGAATGT
TCAGCATACGGAAACACCCGAATAATGACCGGGACTATCACGAGATCCGG
AATGCCAATCCCTTCCGTGAGCGAATCTATAAAGGCCAATTTATTAAATG
TGAAAGCTGTAGTATCTGAGAATGGAACATATCTTTGTACTGTCCGAAGT
GGAAGTGAAAAGGTTAACAGTGCAACTGTGGTTAAGATTTTACCTCACCC
AGTCATAAATACCACAAAAGCATTGGTTTTTGCACCACAAGGAGTTGATT
TCCACTTCCCTTTGTGTCAAGTACGATCCAATCCACCTGCCAAAATTACA
TGGAAAAGAATATTCTGGTCATTACCAGCCGGTCGCTTTCATATCCGAGA
AAAAGAGTTGCTTATAAAAGATGTACGATATTCAGATGAAGGGTTCTATG
TCTGTGAAGCTGAAAACATGCTTGGGTCCTCCAGGACCAAGAGGATTAAG
CCTAGAACCACCACGATTGATCAAAAGCTCACTTGATGACCGAATTGTTA
ATCTAACTGATTCAACAACATTCGAATGTTCTTTTTCTGGAAACCCATTG
CCTGAAATTTCTTGGAAAAGTTCAGCTAAAAACGCTAAAACCATCACTTG
GAAGAATAAAGAAAACCTTGAAGTTTCAAGTCGAATGATCATCTCAAATA
TTTCATGGAGCGATCAAGGACCGATCGAATGCCGTGCGAAGAGCTTGCTC
GGAGAAGTTAGTGTTTCAGGAAATCTTCACACATTGTAAAAATGCACCAC
TATTGACAAGGATTCCAGCGATGTAAAATCAACAGCTAAATTCATTCGTG
GACCACCGATGTGGTAAAAGACAGATCTCGACGTGATGCTCCAAAGATGC
TGGATGAAAATGTACAAAACATTTTATCAAGTATTGAAACCTTAACTGAT
TTCGTTCAAAAGCAATCGAATGAAACATTCAATGGAGAAATCAATCAAGC
TTTGGAAAAATTCTTCATGCAATTCCCTACGAAAAACATTTGTAAACAAT
TCGTAACCCAGTGTGGCTGTAAAGATGGAGAAACTACCTTGGTTATTAGT
TCTCTGTTTTGGCTGTCTTTCTGTCTTTAATTTTCTAAGATATCTGGAAG
TGGACTCTCGATTTAACAGATTGGAGTTAGAAAATTGGAGTAAGGCTCCC
GAGAAAACAGAAAAGACAAATCTGAACCCAGAAACCTCCTTACCCTCGAT
CATAGCTCTAGCTGGTGACGTTGTCAATATCAGTTGTTTTGCATACGGGA
ATACTCAATATATGAACGGGACGATCACAAATGCGGATGTACCGGTACAG
AATGTTACCATCATAACGAAAGATGATTTATTTTTGGTGAAGGCACTGGT
GGTTGATGACGGAACTTTTGTTTGTACCATCCGGAATGAGACAGATGATA
AAGTTATTGTTGAGAATATTTCACGCGTCATATTCTTGCCTGTAAAGCTC
AAATGACAGTCCAATTGAAAATACGTTCGTTGGAATTGCAATCGTCCTCA
CCTTCATTCATCCAAACTACAAAAAATGTTACATCCATCGAATGTTCAGC
ATACGGAAACACCCGAATAATGACCGGGACTATCACGAGATCCGGAATGC
CAATCCCTTCCGTGAGCGAATCTATAAAGGCCAATTTATTAAATGTGAAA
GCTGTAGTATCTGAGAATGGAACATATCTTTGTACTGTCCGAAGTGGAAG
TGAAAAGGTTAACAGTGCAACTGTGGTTAAGATTTTACCTCACCCAGTCA
TAAATACCACAAAAGCATTGGTTTTTGCACCACAAGGAGTTGATTTCCAC
TTCCCTTTGTGTCAAGTACGATCCAATCCACCTGCCAAAATTACATGGAA
AAGAATATTCTGGTCATTACCAGCCGGTCGCTTTCATATCCGAGAAAAAG
AGTTGCTTATAAAAGATGTACGATATTCAGATGAAGGGTTCTATGTCTGT
GAAGCTGAAAACATGCTTGGGTCCTCCAGGACCAAGAGGATTAAGCCTAG
AACCACCACGATTGATCAAAAGCTCACTTGATGACCGAATTGTTAATCTA
ACTGATTCAACAACATTCGAATGTTCTTTTTCTGGAAACCCATTGCCTGA
AATTTCTTGGAAAAGTTCAGCTAAAAACGCTAAAACCATCACTTGGAAGA
ATAAAGAAAACCTTGAAGTTTCAAGTCGAATGATCATCTCAAATATTTCA
TGGAGCGATCAAGGACCGATCGAATGCCGTGCGAAGAGCTTGCTCGGAGA
AGTTAGTGTTTCAGGAAATCTTCACACATTGTAAAAATGCACCACTATTG
ACAAGGATTCCAGCGATGTAAAATCAACAGCTAAATTCATTCGTGGACCA
CCGATGTGGTAAAAGACAGATCTCGACGTGATGCTCCAAAGATGCTGGAT
GAAAATGTACAAAACATTTTATCAAGTATTGAAACCTTAACTGATTTCGT
TCAAAAGCAATCGAATGAAACATTCAATGGAGAAATCAATCAAGCTTTGG
AAAAATTCTTCATGCAATTCCCTACGAAAAACATTTGTAAACAATTCGTA
ACCCAGTGTGGCTGTAAAGATGGAGAAACTACCTTGGTTATTAGTTCTCT
GTTTTGGCTGTCTTTCTGTCTTTAATTTTCTAAGATATCTGGAAGTGGAC
TCTCGATTTAACAGATTGGAGTTAGAAAATTGGAGTAAGGCTCCCGAGAA
AACAGAAAAGACAAATCTGAACCCAGAAACCTCCTTACCCTCGATCATAG
CTCTAGCTGGTGACGTTGTCAATATCAGTTGTTTTGCATACGGGAATACT
CAATATATGAACGGGACGATCACAAATGCGGATGTACCGGTACAGAATGT
TACCATCATAACGAAAGATGATTTATTTTTGGTGAAGGCACTGGTGGTTG
ATGACGGAACTTTTGTTTGTACCATCCGGAATGAGACAGATGATAAAGTT
ATTGTTGAGAATATTTCACGCGTCATATTCTTGCCTGTAAAGCTCAAATG
ACAGTCCAATTGAAAATACGTTCGTTGGAATTGCAATCGTCCTCACCTTC
ATTCATCCAAACTACAAAAAATGTTACATCCATCGAATGTTCAGCATACG
GAAACACCCGAATAATGACCGGGACTATCACGAGATCCGGAATGCCAATC
CCTTCCGTGAGCGAATCTATAAAGGCCAATTTATTAAATGTGAAAGCTGT
AGTATCTGAGAATGGAACATATCTTTGTACTGTCCGAAGTGGAAGTGAAA
AGGTTAACAGTGCAACTGTGGTTAAGATTTTACCTCACCCAGTCATAAAT
ACCACAAAAGCATTGGTTTTTGCACCACAAGGAGTTGATTTCCACTTCCC
TTTGTGTCAAGTACGATCCAATCCACCTGCCAAAATTACATGGAAAAGAA
TATTCTGGTCATTACCAGCCGGTCGCTTTCATATCCGAGAAAAAGAGTTG
CTTATAAAAGATGTACGATATTCAGATGAAGGGTTCTATGTCTGTGAAGC
TGAAAACATGCTTGGGTCCTCCAGGACCAAGAGGATTAAGCCTAGAACCA
CCACGATTGATCAAAAGCTCACTTGATGACCGAATTGTTAATCTAACTGA
TTCAACAACATTCGAATGTTCTTTTTCTGGAAACCCATTGCCTGAAATTT
CTTGGAAAAGTTCAGCTAAAAACGCTAAAACCATCACTTGGAAGAATAAA
GAAAACCTTGAAGTTTCAAGTCGAATGATCATCTCAAATATTTCATGGAG
CGATCAAGGACCGATCGAATGCCGTGCGAAGAGCTTGCTCGGAGAAGTTA
GTGTTTCAGGAAATCTTCACACATTGTAAAAATGCACCACTATTGACAAG
GATTCCAGCGATGTAAAATCAACAGCTAAATTCATTCGTGGACCACCGAT
GTGGTAAAAGACAGATCTCGACGTGATGCTCCAAAGATGCTGGATGAAAA
TGTACAAAACATTTTATCAAGTATTGAAACCTTAACTGATTTCGTTCAAA
AGCAATCGAATGAAACATTCAATGGAGAAATCAATCAAGCTTTGGAAAAA
TTCTTCATGCAATTCCCTACGAAAAACATTTGTAAACAATTCGTAACCCA
GTGTGGCTGTAAAGATGGAGAAACTACCTTGGTTATTAGTTCTCTGTTTT
GGCTGTCTTTCTGTCTTTAATTTTCTAAGATATCTGGAAGTGGACTCTCG
ATTTAACAGATTGGAGTTAGAAAATTGGAGTAAGGCTCCCGAGAAAACAG
AAAAGACAAATCTGAACCCAGAAACCTCCTTACCCTCGATCATAGCTCTA
GCTGGTGACGTTGTCAATATCAGTTGTTTTGCATACGGGAATACTCAATA
TATGAACGGGACGATCACAAATGCGGATGTACCGGTACAGAATGTTACCA
TCATAACGAAAGATGATTTATTTTTGGTGAAGGCACTGGTGGTTGATGAC
GGAACTTTTGTTTGTACCATCCGGAATGAGACAGATGATAAAGTTATTGT
TGAGAATATTTCACGCGTCATATTCTTGCCTGTAAAGCTCAAATGACAGT
CCAATTGAAAATACGTTCGTTGGAATTGCAATCGTCCTCACCTTCATTCA
TCCAAACTACAAAAAATGTTACATCCATCGAATGTTCAGCATACGGAAAC
ACCCGAATAATGACCGGGACTATCACGAGATCCGGAATGCCAATCCCTTC
CGTGAGCGAATCTATAAAGGCCAATTTATTAAATGTGAAAGCTGTAGTAT
CTGAGAATGGAACATATCTTTGTACTGTCCGAAGTGGAAGTGAAAAGGTT
AACAGTGCAACTGTGGTTAAGATTTTACCTCACCCAGTCATAAATACCAC
AAAAGCATTGGTTTTTGCACCACAAGGAGTTGATTTCCACTTCCCTTTGT
GTCAAGTACGATCCAATCCACCTGCCAAAATTACATGGAAAAGAATATTC
TGGTCATTACCAGCCGGTCGCTTTCATATCCGAGAAAAAGAGTTGCTTAT
AAAAGATGTACGATATTCAGATGAAGGGTTCTATGTCTGTGAAGCTGAAA
ACATGCTTGGGTCCTCCAGGACCAAGAGGATTAAGCCTAGAACCACCACG
ATTGATCAAAAGCTCACTTGATGACCGAATTGTTAATCTAACTGATTCAA
CAACATTCGAATGTTCTTTTTCTGGAAACCCATTGCCTGAAATTTCTTGG
AAAAGTTCAGCTAAAAACGCTAAAACCATCACTTGGAAGAATAAAGAAAA
CCTTGAAGTTTCAAGTCGAATGATCATCTCAAATATTTCATGGAGCGATC
AAGGACCGATCGAATGCCGTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTT
TCAGGAAATCTTCACACATTGTAAAAATGCACCACTATTGACAAGGATTC
CAGCGATGTAAAATCAACAGCTAAATTCATTCGTGGACCACCGATGTGGT
AAAAGACAGATCTCGACGTGATGCTCCAAAGATGCTGGATGAAAATGTAC
AAAACATTTTATCAAGTATTGAAACCTTAACTGATTTCGTTCAAAAGCAA
TCGAATGAAACATTCAATGGAGAAATCAATCAAGCTTTGGAAAAATTCTT
CATGCAATTCCCTACGAAAAACATTTGTAAACAATTCGTAACCCAGTGTG
GCTGTAAAGATGGAGAAACTACCTTGGTTATTAGTTCTCTGTTTTGGCTG
TCTTTCTGTCTTTAATTTTCTAAGATATCTGGAAGTGGACTCTCGATTTA
ACAGATTGGAGTTAGAAAATTGGAGTAAGGCTCCCGAGAAAACAGAAAAG
ACAAATCTGAACCCAGAAACCTCCTTACCCTCGATCATAGCTCTAGCTGG
TGACGTTGTCAATATCAGTTGTTTTGCATACGGGAATACTCAATATATGA
ACGGGACGATCACAAATGCGGATGTACCGGTACAGAATGTTACCATCATA
ACGAAAGATGATTTATTTTTGGTGAAGGCACTGGTGGTTGATGACGGAAC
TTTTGTTTGTACCATCCGGAATGAGACAGATGATAAAGTTATTGTTGAGA
ATATTTCACGCGTCATATTCTTGCCTGTAAAGCTCAAATGACAGTCCAAT
TGAAAATACGTTCGTTGGAATTGCAATCGTCCTCACCTTCATTCATCCAA
ACTACAAAAAATGTTACATCCATCGAATGTTCAGCATACGGAAACACCCG
AATAATGACCGGGACTATCACGAGATCCGGAATGCCAATCCCTTCCGTGA
GCGAATCTATAAAGGCCAATTTATTAAATGTGAAAGCTGTAGTATCTGAG
AATGGAACATATCTTTGTACTGTCCGAAGTGGAAGTGAAAAGGTTAACAG
TGCAACTGTGGTTAAGATTTTACCTCACCCAGTCATAAATACCACAAAAG
CATTGGTTTTTGCACCACAAGGAGTTGATTTCCACTTCCCTTTGTGTCAA
GTACGATCCAATCCACCTGCCAAAATTACATGGAAAAGAATATTCTGGTC
ATTACCAGCCGGTCGCTTTCATATCCGAGAAAAAGAGTTGCTTATAAAAG
ATGTACGATATTCAGATGAAGGGTTCTATGTCTGTGAAGCTGAAAACATG
CTTGGGTCCTCCAGGACCAAGAGGATTAAGCCTAGAACCACCACGATTGA
TCAAAAGCTCACTTGATGACCGAATTGTTAATCTAACTGATTCAACAACA
TTCGAATGTTCTTTTTCTGGAAACCCATTGCCTGAAATTTCTTGGAAAAG
TTCAGCTAAAAACGCTAAAACCATCACTTGGAAGAATAAAGAAAACCTTG
AAGTTTCAAGTCGAATGATCATCTCAAATATTTCATGGAGCGATCAAGGA
CCGATCGAATGCCGTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTTTCAGG
AAATCTTCACACATTGTAAAAATGCACCACTATTGACAAGGATTCCAGCG
ATGTAAAATCAACAGCTAAATTCATTCGTGGACCACCGATGTGGTAAAAG
ACAGATCTCGACGTGATGCTCCAAAGATGCTGGATGAAAATGTACAAAAC
ATTTTATCAAGTATTGAAACCTTAACTGATTTCGTTCAAAAGCAATCGAA
TGAAACATTCAATGGAGAAATCAATCAAGCTTTGGAAAAATTCTTCATGC
AATTCCCTACGAAAAACATTTGTAAACAATTCGTAACCCAGTGTGGCTGT
AAAGATGGAGAAACTACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTT
CTGTCTTTAATTTTCTAAGATATCTGGAAGTGGACTCTCGATTTAACAGA
TTGGAGTTAGAAAATTGGAGTAAGGCTCCCGAGAAAACAGAAAAGACAAA
TCTGAACCCAGAAACCTCCTTACCCTCGATCATAGCTCTAGCTGGTGACG
TTGTCAATATCAGTTGTTTTGCATACGGGAATACTCAATATATGAACGGG
ACGATCACAAATGCGGATGTACCGGTACAGAATGTTACCATCATAACGAA
AGATGATTTATTTTTGGTGAAGGCACTGGTGGTTGATGACGGAACTTTTG
TTTGTACCATCCGGAATGAGACAGATGATAAAGTTATTGTTGAGAATATT
TCACGCGTCATATTCTTGCCTGTAAAGCTCAAATGACAGTCCAATTGAAA
ATACGTTCGTTGGAATTGCAATCGTCCTCACCTTCATTCATCCAAACTAC
AAAAAATGTTACATCCATCGAATGTTCAGCATACGGAAACACCCGAATAA
TGACCGGGACTATCACGAGATCCGGAATGCCAATCCCTTCCGTGAGCGAA
TCTATAAAGGCCAATTTATTAAATGTGAAAGCTGTAGTATCTGAGAATGG
AACATATCTTTGTACTGTCCGAAGTGGAAGTGAAAAGGTTAACAGTGCAA
CTGTGGTTAAGATTTTACCTCACCCAGTCATAAATACCACAAAAGCATTG
GTTTTTGCACCACAAGGAGTTGATTTCCACTTCCCTTTGTGTCAAGTACG
ATCCAATCCACCTGCCAAAATTACATGGAAAAGAATATTCTGGTCATTAC
CAGCCGGTCGCTTTCATATCCGAGAAAAAGAGTTGCTTATAAAAGATGTA
CGATATTCAGATGAAGGGTTCTATGTCTGTGAAGCTGAAAACATGCTTGG
GTCCTCCAGGACCAAGAGGATTAAGCCTAGAACCACCACGATTGATCAAA
AGCTCACTTGATGACCGAATTGTTAATCTAACTGATTCAACAACATTCGA
ATGTTCTTTTTCTGGAAACCCATTGCCTGAAATTTCTTGGAAAAGTTCAG
CTAAAAACGCTAAAACCATCACTTGGAAGAATAAAGAAAACCTTGAAGTT
TCAAGTCGAATGATCATCTCAAATATTTCATGGAGCGATCAAGGACCGAT
CGAATGCCGTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTTTCAGGAAATC
TTCACACATTGTAAAAATGCACCACTATTGACAAGGATTCCAGCGATGTA
AAATCAACAGCTAAATTCATTCGTGGACCACCGATGTGGTAAAAGACAGA
TCTCGACGTGATGCTCCAAAGATGCTGGATGAAAATGTACAAAACATTTT
ATCAAGTATTGAAACCTTAACTGATTTCGTTCAAAAGCAATCGAATGAAA
CATTCAATGGAGAAATCAATCAAGCTTTGGAAAAATTCTTCATGCAATTC
CCTACGAAAAACATTTGTAAACAATTCGTAACCCAGTGTGGCTGTAAAGA
TGGAGAAACTACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTTCTGTC
TTTAATTTTCTAAGATATCTGGAAGTGGACTCTCGATTTAACAGATTGGA
GTTAGAAAATTGGAGTAAGGCTCCCGAGAAAACAGAAAAGACAAATCTGA
ACCCAGAAACCTCCTTACCCTCGATCATAGCTCTAGCTGGTGACGTTGTC
AATATCAGTTGTTTTGCATACGGGAATACTCAATATATGAACGGGACGAT
CACAAATGCGGATGTACCGGTACAGAATGTTACCATCATAACGAAAGATG
ATTTATTTTTGGTGAAGGCACTGGTGGTTGATGACGGAACTTTTGTTTGT
ACCATCCGGAATGAGACAGATGATAAAGTTATTGTTGAGAATATTTCACG
CGTCATATTCTTGCCTGTAAAGCTCAAATGACAGTCCAATTGAAAATACG
TTCGTTGGAATTGCAATCGTCCTCACCTTCATTCATCCAAACTACAAAAA
ATGTTACATCCATCGAATGTTCAGCATACGGAAACACCCGAATAATGACC
GGGACTATCACGAGATCCGGAATGCCAATCCCTTCCGTGAGCGAATCTAT
AAAGGCCAATTTATTAAATGTGAAAGCTGTAGTATCTGAGAATGGAACAT
ATCTTTGTACTGTCCGAAGTGGAAGTGAAAAGGTTAACAGTGCAACTGTG
GTTAAGATTTTACCTCACCCAGTCATAAATACCACAAAAGCATTGGTTTT
TGCACCACAAGGAGTTGATTTCCACTTCCCTTTGTGTCAAGTACGATCCA
ATCCACCTGCCAAAATTACATGGAAAAGAATATTCTGGTCATTACCAGCC
GGTCGCTTTCATATCCGAGAAAAAGAGTTGCTTATAAAAGATGTACGATA
TTCAGATGAAGGGTTCTATGTCTGTGAAGCTGAAAACATGCTTGGGTCCT
CCAGGACCAAGAGGATTAAGCCTAGAACCACCACGATTGATCAAAAGCTC
ACTTGATGACCGAATTGTTAATCTAACTGATTCAACAACATTCGAATGTT
CTTTTTCTGGAAACCCATTGCCTGAAATTTCTTGGAAAAGTTCAGCTAAA
AACGCTAAAACCATCACTTGGAAGAATAAAGAAAACCTTGAAGTTTCAAG
TCGAATGATCATCTCAAATATTTCATGGAGCGATCAAGGACCGATCGAAT
GCCGTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTTTCAGGAAATCTTCAC
ACATTGTAAAAATGCACCACTATTGACAAGGATTCCAGCGATGTAAAATC
AACAGCTAAATTCATTCGTGGACCACCGATGTGGTAAAAGACAGATCTCG
ACGTGATGCTCCAAAGATGCTGGATGAAAATGTACAAAACATTTTATCAA
GTATTGAAACCTTAACTGATTTCGTTCAAAAGCAATCGAATGAAACATTC
AATGGAGAAATCAATCAAGCTTTGGAAAAATTCTTCATGCAATTCCCTAC
GAAAAACATTTGTAAACAATTCGTAACCCAGTGTGGCTGTAAAGATGGAG
AAACTACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTTCTGTCTTTAA
TTTTCTAAGATATCTGGAAGTGGACTCTCGATTTAACAGATTGGAGTTAG
AAAATTGGAGTAAGG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033663	XLOC_033663	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00053348-protein	TCONS_00053348-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_228	supercontig	scaffold_228:701500..705752 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	1.50335	0	1.97073	3.16819	1.78962	2.83335	21.5513	17.9397	57.2547	56.1855	18.5086	20.7387	7.27296	4.56638	8.10641	7.07498	8.72896	9.93283	18.0838	13.0164	1.56926	6.00728	31.0657	24.9546

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003598	Ig_sub2
IPR003599	Ig_sub
IPR013783	Ig-like_fold
IPR013098	Ig_I-set
IPR007110	Ig-like_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00053348 vs. Swiss-Prot (Human)

BLAST of TCONS_00053348 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00053348 (transcript) - C. hemisphaerica