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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054508 ID=TCONS_00054508|Name=TCONS_00054508|organism=Clytia hemisphaerica|type=transcript|length=3092bp
GCTGTATATAGTATGGAATTTGTTTTCACAAAATATCCATCAATTCATAt
attatattttcttaaaaatatttttcagatgaataaataccaataaaata
aaagaattttcaagtGAAATAAAAATTCAGTACAAACATTGTTGACGATA
ATGGAAATGGCTTCAGCTTGTTGTTTTCAGTATGGTACTTTTGATGTTTT
CTCTCTATAACACAAGCGTTGGCACCCGATGGAAGTATTATTCGAAGGTC
AATTGGAACGTTCCAATCTATTTAGTGGCAAAGAATGGAAACGCGGGTAC
GCCGTATTACGGAAACATCCGACAACCGGAAGTAAAGTGTTAGAATTTTA
TAAAGACTCGCATTGGAATAAAAACGAGCCGAAAGCTGTTTGTAATTTAC
TGTCCAGTTATGAGGCGTCTTACGTGGTAGGATCAACTAAAAAACGTTTC
GTGTTTGAACTGAAAACGGTTGATCACACGTACGAACTAGGTGCTCCCAG
CGAGGCCTTACGTAAACAATGGATTGACAAATTAAACAGCGCAAAAGACA
TTTTAAACGATAGCAGTATACAAAATATTATACAGACTTTTAATGTTGCT
CTCGTTGATGAAACTTTAGTACGAAAACATTTGAATGGCTTTAGCGGAAC
GTGTCAGTTAATAGTGACGGATTCGGAAGTGATCGTCGTCGCAGCAGGAC
AAATCAAGATCCGTTGGAAGTTCTCCACTATAAGACGCTATAAGTCACAA
ACGGAAACGTTTGTTATTGAGGTCGGGCGGAAGGCGCCCACGGGTGAAGG
TGAATTCCGTTTCGACACGGTCAATCCAATCGAATTGTTCGATGTTCTCG
ATAAAGCCGTGAAAGATCGAATACGTGCCAAAGGAATCGAAATCTCTACA
TTAACACCTTCTTCAGACACGGCGCCCTCTTTTCCTTCTCCACCTTCGGG
CGTTGGGCGTATGCAACCACCTGCAAGGGTGGCTTCTACCAACACCGAGT
ACAGTCATTTAGACCAACATATGCATAAACCAAACTTAGCAACGAGCAGT
ACCGAATACGACTTACTTTTCAACAAAGatcgctttcaacaaaaacgtcg
CTCTGAACCTGTAATCAAAGCACCTCCTTTCGATCACAACGCGCGTAAAT
TAACAGCTGATAGTCAGTTTTCAAACGAGCACGCTGCACAAGCAAACGAG
GATGAGGAAATGTACGAAGACATGAACGCTTCCCTTAAACATCACGACGT
CATTAAATCATCGGGCGATCAACGAAGGCCGCCCTCTTCACGCCCCTTAC
CGCCGCCCCGTGGAGTAATACCAGCAGACGGTGTGAAGAGGCCGTTAAAG
AAATCATTATCGTCTCCGATAGAGGAAAACACTTATGATGCACCGAACCA
TAAAACGAAAATCACTTCTAAAAACAGCGATTATGATTCGCTTTTCAATA
AGAACACAgcgcaacaacaacaacacattCCATCTGAAGATAATTTCTAC
AGTCATTTGAATTATAATCCCACCCCTACGCCTCACCTTCCACTTAAACC
GTCACCATCAAACGGTGACATACCACATGACCAGCAACTAAAAAATAAAC
CCAAAGCTCCCCAACCAAGCATGCGAAAACCCATTTCACGCCCACAACGA
GCTGCGCCCGTACCACCCGGGCGTTCTATGCCAGATGCACCGTCTCCAAA
ACCAATTTCTTTAAGTGCTAGCGCGGGCGCCTCAAATGACCTTATAATGC
AACTCAAAAAGCGGAACATGGAAAAAGGACTTGCGAATCCACCTTCCGGA
GCTAGAGATGACGTTTACGATATTCCGAACTCGACAACCGGTCAATCTAC
GACAAGTTTGAATCAAGCACCGGTAGGCTACAATGCTGTTGGGGACGTCA
TTACTGGACAGTATAAAGAGATTGATAAAGATGCGGACGGTTATGTTTCC
GTTCCTGATAGTACACCGGTGATGGAGGATGATATATATCAGGTACCCAA
ATAAATGCAAAAGgtcttttaaaaatgttcttttcgtGAGCACTGATAGC
CTCGTTCTAATACGATAACacttgaaatcaaaagaaatcgaGCTGATAGA
AGTCTAGAATTATACATATACATCGTTTCTGTTATTTTCCAACAAAActg
aaatgttttctttttatttcatatgCATTGTTTGAAAAAGAGACATTCTG
GTGTTTCCCAAAATTGATTTATGACCTACACTGCTGTAGAGTTCGAATAG
AAGCTCGAATTTGCAATTTGCAAATGTTTATGTGTTTCCATTTTATAgag
ggctgttccattaaaaaaccatacagggggtggacgggGAAACATTtacg
aataactttttacccctttggaaaaatgaaaaaagaccctctggaaattt
ttattggataaccctctggaaatgttcggcCACcaccctgtatggatata
aaatggaatggcccattttttCTTCTGGGAGGAGGGGTTCTATCTTATTG
TTTAGTTAAGAGTTCGATTATTTTTCTAACGTTTTGtacatatatttttt
gtatCATTTTCAAATCacttaattttttgtaaaagatttttctcacgttt
tttctttttttacatttcAGAATTATTTTCTACTCtttaatattgtattt
ttcataATGGAAACTTTCACacgctacggttccgtttcgctccgaagcGA
AATTAAGccattctattgtttaaatttaagttttacgtcacttctgaCCA
ATAGAAGACCATTTCGTTtcagagcgaaacggaaccgttacGTGCAAACA
TGATCTTACCGTATCCCAAAGCCACCTTTGAGACTTTTTACTTCACTGGT
GGACTTCTCACACTGCTGGCAGGATCGTAAAAACCAACAAAGGATCTAGG
TACGACTTCCACTACAGCAACAAAGTTGCTAAAAGCTTGCATATGGCTTA
ATGGCTAAGATTGGTAGTTAAAATGGTTAGAAAAAGATATCATTTAGCAC
TTTTTTGAGTTGTTAAAtgatttaaattcaaaattcatgaaCAGCTTTTA
GGTTGAAATTCCTCCAGCTTCAAATCCAAAGTTTGAAATTTA Run BLAST on NCBI protein sequence of TCONS_00054508-protein >TCONS_00054508-protein ID=TCONS_00054508-protein|Name=TCONS_00054508-protein|organism=Clytia hemisphaerica|type=polypeptide|length=591bp
MEVLFEGQLERSNLFSGKEWKRGYAVLRKHPTTGSKVLEFYKDSHWNKNE
PKAVCNLLSSYEASYVVGSTKKRFVFELKTVDHTYELGAPSEALRKQWID
KLNSAKDILNDSSIQNIIQTFNVALVDETLVRKHLNGFSGTCQLIVTDSE
VIVVAAGQIKIRWKFSTIRRYKSQTETFVIEVGRKAPTGEGEFRFDTVNP
IELFDVLDKAVKDRIRAKGIEISTLTPSSDTAPSFPSPPSGVGRMQPPAR
VASTNTEYSHLDQHMHKPNLATSSTEYDLLFNKDRFQQKRRSEPVIKAPP
FDHNARKLTADSQFSNEHAAQANEDEEMYEDMNASLKHHDVIKSSGDQRR
PPSSRPLPPPRGVIPADGVKRPLKKSLSSPIEENTYDAPNHKTKITSKNS
DYDSLFNKNTAQQQQHIPSEDNFYSHLNYNPTPTPHLPLKPSPSNGDIPH
DQQLKNKPKAPQPSMRKPISRPQRAAPVPPGRSMPDAPSPKPISLSASAG
ASNDLIMQLKKRNMEKGLANPPSGARDDVYDIPNSTTGQSTTSLNQAPVG
YNAVGDVITGQYKEIDKDADGYVSVPDSTPVMEDDIYQVPK Run BLAST on NCBI transcript from alignment at scaffold_243:12809..17076+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054508 ID=TCONS_00054508|Name=TCONS_00054508|organism=Clytia hemisphaerica|type=transcript|length=4268bp|location=Sequence derived from alignment at scaffold_243:12809..17076+ (Clytia hemisphaerica)
GCTGTATATAGTATGGAATTTGTTTTCACAAAATATCCATCAATTCATAt
attatattttcttaaaaatatttttcagatgaataaataccaataaaata
aaagaattttcaagtGAAATAAAAATTCAGTACAAACATTGTTGACGATA
ATGGAAATGGCTTCAGCTTGTTGTTTTCAGTATGGTACTTTTGATGTTTT
CTCTCTATAACACAAGGTGAGTGAAATTCCAATTAATATGCGAATCAAgt
ttaaaaaaccatacaggagAGTGGACGAACctattcaaatcaaaaaaaaa
attattatgtcgataccccctggaaaatttgcAAGAATACCCCttggaaa
gatttttttcatccCTTAAAGTGAGAGTGGACAAACTGAAATCATTCTTC
TACCTAGTGAAAATTTTGGAATATGGAATAAccttttacccccttggaaa
aatgaaaaaagggcCCCTGTATGGATGTAAAATGGAATGACCCATTCTTT
TTTCATGATAACAAATGTCAAATCATATCCCTCAGCCATACAAATActga
gaaaagaaaagagagaaattttgctacttttttattaccttaaaggaaaa
aGTGTTTGCCGGAATTTAAAGATGTTTATTTAGAGGGAATTAGATTTGGt
ggatgaattgaaaaaataaatttttttggagaAAGGATTTCTTTGATCAA
GAATCATTATCAAATgagcacaaaaaaaaaactaaaaagcgCCAGAGATC
ACAAGAATATGGCTATAATTTACGTATgtagggaatttaatttggttgTT
AGCAGAGAAAGatttttggtgggaacttaatATGACAATTCCGACACATA
TTCTttccgtcaaaatttcttccttttctgGTAAATTCTCATCCCTTGAA
TATACATATgtgatctttcattggaacttctgtaaaatcgggattatttt
ggctaatttcctttgtatctccttaagtagtgctcataaggAGATTAAAT
TTAGTATATCAAGTCtccttatagcaatgtaaaagtaggaaaaaaggttt
tttgatacatcaaactGTTCACTAGTTATtgagcactttcgttttcgaga
gatcactatatcccgtcctcatcccggttgagatccctctaaatcggaat
caagataattccggataagaaagtgctagagacttgaaattttcacagaa
tgtgAAAAAGAGAACGTTTTTTCTCagtcaattttctaaaatttggctaa
aacaaggaattttgaatccgattaatccaatGAAAGATCGCCGTGAATCA
CTAATGAGGACAGTTTAAGAATCCCCCTCGCAATAGGGGGAAAAAGCTCG
ATATGATTTCACttgaacaaatatttttgtttacatctttAGCGTTGGCA
CCCGATGGAAGTATTATTCGAAGGTCAATTGGAACGTTCCAATCTATTTA
GTGGCAAAGAATGGAAACGCGGGTACGCCGTATTACGGAAACATCCGACA
ACCGGAAGTAAAGTGTTAGAATTTTATAAAGACTCGCATTGGAATAAAAA
CGAGCCGAAAGCTGTTTGTAATTTACTGTCCAGTTATGAGGCGTCTTACG
TGGTAGGATCAACTAAAAAACGTTTCGTGTTTGAACTGAAAACGGTTGAT
CACACGTACGAACTAGGTGCTCCCAGCGAGGCCTTACGTAAACAATGGAT
TGACAAATTAAACAGCGCAAAAGACATTTTAAACGATAGCAGTATACAAA
ATATTATACAGACTTTTAATGTTGCTCTCGTTGATGAAACTTTAGTACGA
AAACATTTGAATGGCTTTAGCGGAACGTGTCAGTTAATAGTGACGGATTC
GGAAGTGATCGTCGTCGCAGCAGGACAAATCAAGATCCGTTGGAAGTTCT
CCACTATAAGACGCTATAAGTCACAAACGGAAACGTTTGTTATTGAGGTC
GGGCGGAAGGCGCCCACGGGTGAAGGTGAATTCCGTTTCGACACGGTCAA
TCCAATCGAATTGTTCGATGTTCTCGATAAAGCCGTGAAAGATCGAATAC
GTGCCAAAGGAATCGAAATCTCTACATTAACACCTTCTTCAGACACGGCG
CCCTCTTTTCCTTCTCCACCTTCGGGCGTTGGGCGTATGCAACCACCTGC
AAGGGTGGCTTCTACCAACACCGAGTACAGTCATTTAGACCAACATATGC
ATAAACCAAACTTAGCAACGAGCAGTACCGAATACGACTTACTTTTCAAC
AAAGatcgctttcaacaaaaacgtcgCTCTGAACCTGTAATCAAAGCACC
TCCTTTCGATCACAACGCGCGTAAATTAACAGCTGATAGTCAGTTTTCAA
ACGAGCACGCTGCACAAGCAAACGAGGATGAGGAAATGTACGAAGACATG
AACGCTTCCCTTAAACATCACGACGTCATTAAATCATCGGGCGATCAACG
AAGGCCGCCCTCTTCACGCCCCTTACCGCCGCCCCGTGGAGTAATACCAG
CAGACGGTGTGAAGAGGCCGTTAAAGAAATCATTATCGTCTCCGATAGAG
GAAAACACTTATGATGCACCGAACCATAAAACGAAAATCACTTCTAAAAA
CAGCGATTATGATTCGCTTTTCAATAAGAACACAgcgcaacaacaacaac
acattCCATCTGAAGATAATTTCTACAGTCATTTGAATTATAATCCCACC
CCTACGCCTCACCTTCCACTTAAACCGTCACCATCAAACGGTGACATACC
ACATGACCAGCAACTAAAAAATAAACCCAAAGCTCCCCAACCAAGCATGC
GAAAACCCATTTCACGCCCACAACGAGCTGCGCCCGTACCACCCGGGCGT
TCTATGCCAGATGCACCGTCTCCAAAACCAATTTCTTTAAGTGCTAGCGC
GGGCGCCTCAAATGACCTTATAATGCAACTCAAAAAGCGGAACATGGAAA
AAGGACTTGCGAATCCACCTTCCGGAGCTAGAGATGACGTTTACGATATT
CCGAACTCGACAACCGGTCAATCTACGACAAGTTTGAATCAAGCACCGGT
AGGCTACAATGCTGTTGGGGACGTCATTACTGGACAGTATAAAGAGATTG
ATAAAGATGCGGACGGTTATGTTTCCGTTCCTGATAGTACACCGGTGATG
GAGGATGATATATATCAGGTACCCAAATAAATGCAAAAGgtcttttaaaa
atgttcttttcgtGAGCACTGATAGCCTCGTTCTAATACGATAACacttg
aaatcaaaagaaatcgaGCTGATAGAAGTCTAGAATTATACATATACATC
GTTTCTGTTATTTTCCAACAAAActgaaatgttttctttttatttcatat
gCATTGTTTGAAAAAGAGACATTCTGGTGTTTCCCAAAATTGATTTATGA
CCTACACTGCTGTAGAGTTCGAATAGAAGCTCGAATTTGCAATTTGCAAA
TGTTTATGTGTTTCCATTTTATAgagggctgttccattaaaaaaccatac
agggggtggacgggGAAACATTtacgaataactttttacccctttggaaa
aatgaaaaaagaccctctggaaatttttattggataaccctctggaaatg
ttcggcCACcaccctgtatggatataaaatggaatggcccattttttCTT
CTGGGAGGAGGGGTTCTATCTTATTGTTTAGTTAAGAGTTCGATTATTTT
TCTAACGTTTTGtacatatattttttgtatCATTTTCAAATCacttaatt
ttttgtaaaagatttttctcacgttttttctttttttacatttcAGAATT
ATTTTCTACTCtttaatattgtatttttcataATGGAAACTTTCACacgc
tacggttccgtttcgctccgaagcGAAATTAAGccattctattgtttaaa
tttaagttttacgtcacttctgaCCAATAGAAGACCATTTCGTTtcagag
cgaaacggaaccgttacGTGCAAACATGATCTTACCGTATCCCAAAGCCA
CCTTTGAGACTTTTTACTTCACTGGTGGACTTCTCACACTGCTGGCAGGA
TCGTAAAAACCAACAAAGGATCTAGGTACGACTTCCACTACAGCAACAAA
GTTGCTAAAAGCTTGCATATGGCTTAATGGCTAAGATTGGTAGTTAAAAT
GGTTAGAAAAAGATATCATTTAGCACTTTTTTGAGTTGTTAAAtgattta
aattcaaaattcatgaaCAGCTTTTAGGTTGAAATTCCTCCAGCTTCAAA
TCCAAAGTTTGAAATTTA Coding sequence (CDS) from alignment at scaffold_243:12809..17076+ >TCONS_00054508 ID=TCONS_00054508|Name=TCONS_00054508|organism=Clytia hemisphaerica|type=CDS|length=1776bp|location=Sequence derived from alignment at scaffold_243:12809..17076+ (Clytia hemisphaerica)
ATGGAAGTATTATTCGAAGGTCAATTGGAACGTTCCAATCTATTTAGTGG
CAAAGAATGGAAACGCGGGTACGCCGTATTACGGAAACATCCGACAACCG
GAAGTAAAGTGTTAGAATTTTATAAAGACTCGCATTGGAATAAAAACGAG
CCGAAAGCTGTTTGTAATTTACTGTCCAGTTATGAGGCGTCTTACGTGGT
AGGATCAACTAAAAAACGTTTCGTGTTTGAACTGAAAACGGTTGATCACA
CGTACGAACTAGGTGCTCCCAGCGAGGCCTTACGTAAACAATGGATTGAC
AAATTAAACAGCGCAAAAGACATTTTAAACGATAGCAGTATACAAAATAT
TATACAGACTTTTAATGTTGCTCTCGTTGATGAAACTTTAGTACGAAAAC
ATTTGAATGGCTTTAGCGGAACGTGTCAGTTAATAGTGACGGATTCGGAA
GTGATCGTCGTCGCAGCAGGACAAATCAAGATCCGTTGGAAGTTCTCCAC
TATAAGACGCTATAAGTCACAAACGGAAACGTTTGTTATTGAGGTCGGGC
GGAAGGCGCCCACGGGTGAAGGTGAATTCCGTTTCGACACGGTCAATCCA
ATCGAATTGTTCGATGTTCTCGATAAAGCCGTGAAAGATCGAATACGTGC
CAAAGGAATCGAAATCTCTACATTAACACCTTCTTCAGACACGGCGCCCT
CTTTTCCTTCTCCACCTTCGGGCGTTGGGCGTATGCAACCACCTGCAAGG
GTGGCTTCTACCAACACCGAGTACAGTCATTTAGACCAACATATGCATAA
ACCAAACTTAGCAACGAGCAGTACCGAATACGACTTACTTTTCAACAAAG
atcgctttcaacaaaaacgtcgCTCTGAACCTGTAATCAAAGCACCTCCT
TTCGATCACAACGCGCGTAAATTAACAGCTGATAGTCAGTTTTCAAACGA
GCACGCTGCACAAGCAAACGAGGATGAGGAAATGTACGAAGACATGAACG
CTTCCCTTAAACATCACGACGTCATTAAATCATCGGGCGATCAACGAAGG
CCGCCCTCTTCACGCCCCTTACCGCCGCCCCGTGGAGTAATACCAGCAGA
CGGTGTGAAGAGGCCGTTAAAGAAATCATTATCGTCTCCGATAGAGGAAA
ACACTTATGATGCACCGAACCATAAAACGAAAATCACTTCTAAAAACAGC
GATTATGATTCGCTTTTCAATAAGAACACAgcgcaacaacaacaacacat
tCCATCTGAAGATAATTTCTACAGTCATTTGAATTATAATCCCACCCCTA
CGCCTCACCTTCCACTTAAACCGTCACCATCAAACGGTGACATACCACAT
GACCAGCAACTAAAAAATAAACCCAAAGCTCCCCAACCAAGCATGCGAAA
ACCCATTTCACGCCCACAACGAGCTGCGCCCGTACCACCCGGGCGTTCTA
TGCCAGATGCACCGTCTCCAAAACCAATTTCTTTAAGTGCTAGCGCGGGC
GCCTCAAATGACCTTATAATGCAACTCAAAAAGCGGAACATGGAAAAAGG
ACTTGCGAATCCACCTTCCGGAGCTAGAGATGACGTTTACGATATTCCGA
ACTCGACAACCGGTCAATCTACGACAAGTTTGAATCAAGCACCGGTAGGC
TACAATGCTGTTGGGGACGTCATTACTGGACAGTATAAAGAGATTGATAA
AGATGCGGACGGTTATGTTTCCGTTCCTGATAGTACACCGGTGATGGAGG
ATGATATATATCAGGTACCCAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054508-exon-scaffold_243-1491911889:12809..13024 | TCONS_00054508-exon-scaffold_243-1491911889:12809..13024 | Clytia hemisphaerica | exon |
| TCONS_00054508-exon-scaffold_243-1510915933:12809..13024 | TCONS_00054508-exon-scaffold_243-1510915933:12809..13024 | Clytia hemisphaerica | exon |
| TCONS_00054508-exon-scaffold_243-1575043694:12809..13024 | TCONS_00054508-exon-scaffold_243-1575043694:12809..13024 | Clytia hemisphaerica | exon |
| TCONS_00054508-exon-scaffold_243-1491911889:14201..17076 | TCONS_00054508-exon-scaffold_243-1491911889:14201..17076 | Clytia hemisphaerica | exon |
| TCONS_00054508-exon-scaffold_243-1510915933:14201..17076 | TCONS_00054508-exon-scaffold_243-1510915933:14201..17076 | Clytia hemisphaerica | exon |
| TCONS_00054508-exon-scaffold_243-1575043694:14201..17076 | TCONS_00054508-exon-scaffold_243-1575043694:14201..17076 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_243 | supercontig | scaffold_243:12809..17076 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005158 | insulin receptor binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005158 |
insulin receptor binding |
Blast
The following BLAST results are available for this feature:
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