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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055324 ID=TCONS_00055324|Name=TCONS_00055324|organism=Clytia hemisphaerica|type=transcript|length=322bp
TACAAATTCATCAATAAACATTGAAGCCCTATAAAAACCGAACTTAGAAA
CCTACAAATCATTCATTCAACAACATCTCAAGCATACAGTATAACTCAAG
ATAAGAAATCAAACAGAAATCAATTCATCATGTCTCGGATTATGTTGGCA
GTTATTCTATTCTCGGCTGTTTTCTACTCAATCGAATGCATCACATCAGG
TGGAAGTGCCCTAGTTGGTAAACGCGATACCATGGAATTATTGAAATCCT
CAGATATGCTGATGGACGACAAAACTTACTCCTATTTGGTCAAGAAAAGA
GTTGTCAACGAGTTGAGAAGNA Run BLAST on NCBI transcript from alignment at scaffold_253:147134..148347+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055324 ID=TCONS_00055324|Name=TCONS_00055324|organism=Clytia hemisphaerica|type=transcript|length=1214bp|location=Sequence derived from alignment at scaffold_253:147134..148347+ (Clytia hemisphaerica)
TACAAATTCATCAATAAACATTGAAGCCCTATAAAAACCGAACTTAGAAA
CCTACAAATCATTCATTCAACAACATCTCAAGCATACAGTATAACTCAAG
ATAAGAAATCAAACAGAAATCAATTCATCATGTCTCGGATTATGTTGGCA
GTTATTCTATTCTCGGCTGTTTTCTACTCAATCGAATGCATCACATCAGG
TGGAAGTGCCCTAGTTGGTAAACGCGATACCATGGAATTATTGAAATCCT
CAGATATGCTGATGGACGACAAAACTTACTCCTATTTGGTCAAGAAAAGA
GTGAGTTAGATTTTATCAATTTCGTACCAGACCCCCTTGCaccaattttc
gaatttttgattttacgaACTTTTGTGAGTGTTATTTGAAACTTctctgt
ctcacagcctcggtggaacttttttcttcagtggggataaaaattcctat
tgaaattccaatggggatagcaATTCTATAGtccaaaggttaaaaaaaat
ctagtggggttggttttggagtgcaatttttaaacattgaattttgagtg
gggatgaaatcaaagtctcagggtattttcccaccggggacgaaattttc
cagtggggctggggttccAGCGGGACAAAGAAATGTTTTGAATCATGAAA
GCGAACCAAGGGGGttcaaattttagtttttactaattttcaagaaagAT
TTCAGACCTGTGGTCTAAAAACTACCTATTAGAAAAAATTCGATTAAATC
AATTTAATCCCCATTGCCATTGGAAAAATGTACTGTAATCCCATCTCGAC
TAGATCCTTCTCATTAAAAGCTGGTAAAACATTTCTCAAGTAGTCatcga
gacaggggtgtttattttTATATGATTATGACCCAAAGATTTTAATAACG
TCCCATGGATCCTTTTTTCCTCTTATATGCATGCCCTTTAATAAAGTGTC
TCCCTTTTCTTAGTTTTTTAGCACTTTTCCTCACATTCCACCTTCGTTTA
TGTAGGAAACCTAGGTATAAGTTGAACAATCagcttaaaaatgattttaa
tatgTTCTTCTCACCATTTTGAGCgaaagaaatgttcttaaattttgctc
GCCATCGAAtccttctgttcttataaagtttgttcttatacaaaaaaacg
TGTTAAATCTAATCTCTAATttgtcttttgtttctttcacaGGTTGTCAA
CGAGTTGAGAAGNA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055324-exon-scaffold_253-1491911889:147134..147433 | TCONS_00055324-exon-scaffold_253-1491911889:147134..147433 | Clytia hemisphaerica | exon |
| TCONS_00055324-exon-scaffold_253-1510915933:147134..147433 | TCONS_00055324-exon-scaffold_253-1510915933:147134..147433 | Clytia hemisphaerica | exon |
| TCONS_00055324-exon-scaffold_253-1575043694:147134..147433 | TCONS_00055324-exon-scaffold_253-1575043694:147134..147433 | Clytia hemisphaerica | exon |
| TCONS_00055324-exon-scaffold_253-1491911889:148326..148347 | TCONS_00055324-exon-scaffold_253-1491911889:148326..148347 | Clytia hemisphaerica | exon |
| TCONS_00055324-exon-scaffold_253-1510915933:148326..148347 | TCONS_00055324-exon-scaffold_253-1510915933:148326..148347 | Clytia hemisphaerica | exon |
| TCONS_00055324-exon-scaffold_253-1575043694:148326..148347 | TCONS_00055324-exon-scaffold_253-1575043694:148326..148347 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:147134..148347 + |
Blast
The following BLAST results are available for this feature:
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