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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056229 ID=TCONS_00056229|Name=TCONS_00056229|organism=Clytia hemisphaerica|type=transcript|length=893bp
CTTTGCTGTACGTTGTCAATCTCCTCCAATCTTTTGGTCACAGCTTTGAT
TCCCTCCGAACTGAGATTTTGATGAAGTGACAACTGTTGAGCGAGGTTGC
CAATTTTTTGAGTTGTTGAAATTTGGAAATCTGTAACATCTTGAGATAAT
GATGCTTGTTGATTCTCAAGGGCTGCCTGCTTGTTTGCTAGGGTCGTATG
TTTAGTATCTTGGGCGGTCTGTTTGGTAACCAGGGCCGTTTGTTGATCAG
CTTGGGCCGTCTGTTGTTTAGAAAGTGTTTCTTGCTTTCTCTCTAGATAC
AAATACATAGATTTGACAACATTCTCGTACTTTAGGTCCAATGACATTGT
TTTCAGCTGCGTTGTGTCGTAAGTAAAGCCAAGATTGTTGATGATTTGCT
CTCCTTCCATCCATTTCTGATTAAATTctgtttgattgattttatcTGGA
TCTGTGTGGTGAATGTAATTTCGCCATTCTCTTGCACGAATTACAAATGC
ACCGATACTTAAGTCAGTTGCAGGTGGATTTTTGTTTTTCCATCCTTTGA
GAGGAGCAGGAAGATTGGTAAAATTGATAATCAAAATACAGATGAGCGTA
ACATCAAATTGAGAAGAGTCGGTTGCGTTTCTAGTAGGAGGTAGTAATGC
ATCCACTTGATCTTGTTTTAAAACATTTCCTTTCTTCAACTTCTTTATTT
TCGTTTGATGATTGGCATCTGTCGAGAGTTTTTGATATAGTTGTTGAGGG
TCTTGAGGTAGACCATTGTATGAAGGGTCATTAGAGAGGTTATGGAGTAC
ATGAAGTAGAAATGACTTTAGAGGTCCATGAAGGAAAGTGGCAAGTCGTA
ACCAGAATTGGATTGCAGTGATTAGAGCAGCGATCGTCAATGT Run BLAST on NCBI protein sequence of TCONS_00056229-protein >TCONS_00056229-protein ID=TCONS_00056229-protein|Name=TCONS_00056229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
TLTIAALITAIQFWLRLATFLHGPLKSFLLHVLHNLSNDPSYNGLPQDPQ
QLYQKLSTDANHQTKIKKLKKGNVLKQDQVDALLPPTRNATDSSQFDVTL
ICILIINFTNLPAPLKGWKNKNPPATDLSIGAFVIRAREWRNYIHHTDPD
KINQTEFNQKWMEGEQIINNLGFTYDTTQLKTMSLDLKYENVVKSMYLYL
ERKQETLSKQQTAQADQQTALVTKQTAQDTKHTTLANKQAALENQQASLS
QDVTDFQISTTQKIGNLAQQLSLHQNLSSEGIKAVTKRLEEIDNVQQ Run BLAST on NCBI transcript from alignment at scaffold_269:149601..150493 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056229 ID=TCONS_00056229|Name=TCONS_00056229|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at scaffold_269:149601..150493 (Clytia hemisphaerica)
ACATTGACGATCGCTGCTCTAATCACTGCAATCCAATTCTGGTTACGACT
TGCCACTTTCCTTCATGGACCTCTAAAGTCATTTCTACTTCATGTACTCC
ATAACCTCTCTAATGACCCTTCATACAATGGTCTACCTCAAGACCCTCAA
CAACTATATCAAAAACTCTCGACAGATGCCAATCATCAAACGAAAATAAA
GAAGTTGAAGAAAGGAAATGTTTTAAAACAAGATCAAGTGGATGCATTAC
TACCTCCTACTAGAAACGCAACCGACTCTTCTCAATTTGATGTTACGCTC
ATCTGTATTTTGATTATCAATTTTACCAATCTTCCTGCTCCTCTCAAAGG
ATGGAAAAACAAAAATCCACCTGCAACTGACTTAAGTATCGGTGCATTTG
TAATTCGTGCAAGAGAATGGCGAAATTACATTCACCACACAGATCCAgat
aaaatcaatcaaacagAATTTAATCAGAAATGGATGGAAGGAGAGCAAAT
CATCAACAATCTTGGCTTTACTTACGACACAACGCAGCTGAAAACAATGT
CATTGGACCTAAAGTACGAGAATGTTGTCAAATCTATGTATTTGTATCTA
GAGAGAAAGCAAGAAACACTTTCTAAACAACAGACGGCCCAAGCTGATCA
ACAAACGGCCCTGGTTACCAAACAGACCGCCCAAGATACTAAACATACGA
CCCTAGCAAACAAGCAGGCAGCCCTTGAGAATCAACAAGCATCATTATCT
CAAGATGTTACAGATTTCCAAATTTCAACAACTCAAAAAATTGGCAACCT
CGCTCAACAGTTGTCACTTCATCAAAATCTCAGTTCGGAGGGAATCAAAG
CTGTGACCAAAAGATTGGAGGAGATTGACAACGTACAGCAAAG Coding sequence (CDS) from alignment at scaffold_269:149601..150493 >TCONS_00056229 ID=TCONS_00056229|Name=TCONS_00056229|organism=Clytia hemisphaerica|type=CDS|length=891bp|location=Sequence derived from alignment at scaffold_269:149601..150493 (Clytia hemisphaerica)
ACATTGACGATCGCTGCTCTAATCACTGCAATCCAATTCTGGTTACGACT
TGCCACTTTCCTTCATGGACCTCTAAAGTCATTTCTACTTCATGTACTCC
ATAACCTCTCTAATGACCCTTCATACAATGGTCTACCTCAAGACCCTCAA
CAACTATATCAAAAACTCTCGACAGATGCCAATCATCAAACGAAAATAAA
GAAGTTGAAGAAAGGAAATGTTTTAAAACAAGATCAAGTGGATGCATTAC
TACCTCCTACTAGAAACGCAACCGACTCTTCTCAATTTGATGTTACGCTC
ATCTGTATTTTGATTATCAATTTTACCAATCTTCCTGCTCCTCTCAAAGG
ATGGAAAAACAAAAATCCACCTGCAACTGACTTAAGTATCGGTGCATTTG
TAATTCGTGCAAGAGAATGGCGAAATTACATTCACCACACAGATCCAgat
aaaatcaatcaaacagAATTTAATCAGAAATGGATGGAAGGAGAGCAAAT
CATCAACAATCTTGGCTTTACTTACGACACAACGCAGCTGAAAACAATGT
CATTGGACCTAAAGTACGAGAATGTTGTCAAATCTATGTATTTGTATCTA
GAGAGAAAGCAAGAAACACTTTCTAAACAACAGACGGCCCAAGCTGATCA
ACAAACGGCCCTGGTTACCAAACAGACCGCCCAAGATACTAAACATACGA
CCCTAGCAAACAAGCAGGCAGCCCTTGAGAATCAACAAGCATCATTATCT
CAAGATGTTACAGATTTCCAAATTTCAACAACTCAAAAAATTGGCAACCT
CGCTCAACAGTTGTCACTTCATCAAAATCTCAGTTCGGAGGGAATCAAAG
CTGTGACCAAAAGATTGGAGGAGATTGACAACGTACAGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056229-exon-scaffold_269-1491911889:149601..150493 | TCONS_00056229-exon-scaffold_269-1491911889:149601..150493 | Clytia hemisphaerica | exon |
| TCONS_00056229-exon-scaffold_269-1510915933:149601..150493 | TCONS_00056229-exon-scaffold_269-1510915933:149601..150493 | Clytia hemisphaerica | exon |
| TCONS_00056229-exon-scaffold_269-1575043694:149601..150493 | TCONS_00056229-exon-scaffold_269-1575043694:149601..150493 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_269 | supercontig | scaffold_269:149601..150493 . |
Blast
The following BLAST results are available for this feature:
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