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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056732 ID=TCONS_00056732|Name=TCONS_00056732|organism=Clytia hemisphaerica|type=transcript|length=880bp
CAGGTTCTCCATTCATACAGCGCACACAAGGTTTTGTTGATATCAGTGAT
TTCTCAGCAACTTGCATCTgttgttgattttgattttgtgaTTGAGCCTA
AAGAACAGAGATTTCGATTTGCTAAAATAGACCAGAAAACTAtgataaaa
aagttttgttttaagtactaaaaaaaataaacaaaagttgTACCATTCGT
GAAAAGTTTGCATTTCCATTTACTTGGACTTCATTGGATTTTGCAcgctg
aaaataaaattttggttcaatATAATTAGCAAACTTATTTTGATACGTGA
ATAGTCAGATAAAGAAATACAACACAATTATCTTTTGAATAACACATTCA
AATAAAGTAGCCAAATACAGCCAGTAGCCAAAGCATAATTCCCATTGTAT
TTATAGTCATCCAGAGGATTTCCAATCATTGGTGTTATAACAAAATGCTA
TCTGTGTAGAATTTTCTCAAAGTAAATATATGGGAATTGatggaaaacaa
aaaatacttttcGCTGTTGATTCATGGTATTGCATCTTGCCCCTTGGCAT
TCCATATCTACATCGCCATTGTCATCCACTGaagaaaaatttctcttttt
accCCCATTTGGTAGTGGTGTTACATTTTGGTGTTGATGATGATAATTTC
CATTTATAAGCTCCTGTTGTTGACATCTGTTATGAACTTCCAAATGTTGA
AGTTTTTGCGTTAAATTATTATGTTGTTGTTGTAAAGAATGGTAGCTGCA
AAAACATTCATCCAGTAACATCCTCACAGTCTTGACTTTATTTCAAAGTG
TTTGATTTACTCTGCTGTGTGCAAGAAAAGTATAATATGTATAATATCCA
TTATTTGACGCAATGGAGCATAAACTCCAG Run BLAST on NCBI transcript from alignment at scaffold_282:194344..195293+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056732 ID=TCONS_00056732|Name=TCONS_00056732|organism=Clytia hemisphaerica|type=transcript|length=950bp|location=Sequence derived from alignment at scaffold_282:194344..195293+ (Clytia hemisphaerica)
CAGGTTCTCCATTCATACAGCGCACACAAGGTTTTGTTGATATCAGTGAT
TTCTCAGCAACTTGCATCTgttgttgattttgattttgtgaTTGAGCCTA
AAGAACAGAGATTTCGATTTGCTAAAATAGACCAGAAAACTAtgataaaa
aagttttgttttaagtactaaaaaaaataaacaaaagttgTACCATTCGT
GAAAAGTTTGCATTTCCATTTACTTGGACTTCATTGGATTTTGCAcgctg
aaaataaaattttggttcaatATAATTAGCAAACTTATTTTGATACGTGA
ATAGTCAGATAAAGAAATACAACACAATTATCTTTTGAATAACACATTCA
AATAAAGTAGCCAAATACAGCCAGTAGCCAAAGCATAATTCCCATTGTAT
TTATAGTCATCCAGAGGATTTCCAATCATTGGTGTTATAACAAAATGCTA
TCTGTGTAGAATTTTCTCAAAGTAAATATATGGGAATTGatggaaaacaa
aaaatacttttcGCTGTTGATTCATGGTATTGCATCTTGCCCCTTGGCAT
TCCATATCTACATCGCCATTGTCATCCACTGaagaaaaatttctcttttt
accCCCATTTGGTAGTGGTGTTACATTTTGGTGTTGATGATGATAATTTC
CATTTATAAGCTCCTGTTGTTGACATCTGTTATGAACTNGTTACATTTTG
GTGTTGATGATGATAATTTCCATTTATAAGCTCATGTTGTTGACATCTGT
TATGAACTTCCAAATGTTGAAGTTTTTGCGTTAAATTATTATGTTGTTGT
TGTAAAGAATGGTAGCTGCAAAAACATTCATCCAGTAACATCCTCACAGT
CTTGACTTTATTTCAAAGTGTTTGATTTACTCTGCTGTGTGCAAGAAAAG
TATAATATGTATAATATCCATTATTTGACGCAATGGAGCATAAACTCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056732-exon-scaffold_282-1491911889:194344..195017 | TCONS_00056732-exon-scaffold_282-1491911889:194344..195017 | Clytia hemisphaerica | exon |
| TCONS_00056732-exon-scaffold_282-1510915933:194344..195017 | TCONS_00056732-exon-scaffold_282-1510915933:194344..195017 | Clytia hemisphaerica | exon |
| TCONS_00056732-exon-scaffold_282-1575043694:194344..195017 | TCONS_00056732-exon-scaffold_282-1575043694:194344..195017 | Clytia hemisphaerica | exon |
| TCONS_00056732-exon-scaffold_282-1491911889:195088..195293 | TCONS_00056732-exon-scaffold_282-1491911889:195088..195293 | Clytia hemisphaerica | exon |
| TCONS_00056732-exon-scaffold_282-1510915933:195088..195293 | TCONS_00056732-exon-scaffold_282-1510915933:195088..195293 | Clytia hemisphaerica | exon |
| TCONS_00056732-exon-scaffold_282-1575043694:195088..195293 | TCONS_00056732-exon-scaffold_282-1575043694:195088..195293 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_282 | supercontig | scaffold_282:194344..195293 + |
Blast
The following BLAST results are available for this feature:
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