TCONS_00056741 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056741
Unique NameTCONS_00056741
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2380

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056741 ID=TCONS_00056741|Name=TCONS_00056741|organism=Clytia hemisphaerica|type=transcript|length=2380bp
TATAAAAAGAAAAGCTAAGCATCGTTGTACTCATATTTAAGTAAAAGAGC
ATAGTAGTGCAACGCGAGAGGGTATAAGGGTACTAACACAGTGGGACAGC
GAACCCTACAAAAAAGACTAACCATCAATTGATATTCTCGCATAAAGAAG
TACATACTACATACACAAAAGAAacaacattttgattttgaatacaCACG
ACAGACTGAGTGGACAAGGAAGCTTCATTTTACGTGATACATTTTGAACT
ACAAGGATTATTAGACCAACAAAATAATAATCGAGACGAGACAAAATCTG
AAGAGCTTGAAGGATTTATGTATGGTTTTTTATCGCGCAAGATTACTATC
ACATCTTAAATCTTGATTTTACTATTAACATCATCTTTCGAACCTTAAAA
TctttaaactaaaaaaaatgattGGCTTTGGAATGAAAACGAGGTTGGCA
ATCATCTACTGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAA
CGTCGAATTAAAAATGAACGATATTGAATCAATGAACCCATACGTTCTCT
GTAGTTCCATTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTCA
ATGGAGAAACAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGC
CAAAGAATGTCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTG
CTTTCGAATCTGCACCAAGGATCACCTATTATCCTATCCCTGAAACTGCA
TTCTTGTATGCCATCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGC
GTGTTACGAAGGCAAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGG
TAAACATCACAACcgaaacattacttaaacatcaAGCCAATCAGAAATCC
CCGGAACAACCGCATATAATGGAGGACCGTAAATGCGCGAAACACAGTTT
ACAATATGGAATTGAAGAATCAATGCAATTGTTGGAAAACAAACATGAGA
ACGATATCCGATGGCGAATGGATAACCATAATAAACAAGCTGGACGATTG
GCTCTTATCGATGGACCAATCAACAAGAATCGAGTATGCAGCTGTCACGG
TGTATCTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTACCGAAAT
TTGGTGATGTTTCAGATTATCTAATGGAGAAATATAAATCAGCCGTCCGA
ATGGGTTCCAATAACCATGGACACTTGATCCCACATCGAGACACTTTGAA
CAAAAAACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTT
TTTGCTCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTT
TGCGACCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAA
TCGTGGGTCAGAGAAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTA
AGTTTAAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTA
GAATTAGATGTCTGCAAATAGGTGACGAGATTGagtaaagatggcggaga
agttGTGAATCCAAGATGCGGGATGAAGTAGCGAAGTGATAGCAAAGACT
TCACTAACAAGTAAATCATTGAACGGGAATCATTTCGGATGCAGCTCTCT
ATAAAACTCAAGAACgtgtttttgaagaattttatcATACCGTTCAATGT
CAATTCATTGGGTAAATGAAGACTCGGGCGTTGGGCgtacaaaacaaaga
aaaggacATGTAATCATAGCTTTATCAGAAAAAAGAagtttatattattt
attacagaaacaaattattatttttttaattgatatttataattttgata
ttttatatgGAATATTTTTATCATACCCACAAAGCTTAAATTGCTTAAAT
CAGCGCGAAGCTTTCGaaaattaaaatagaaattgcaTCATGGCATTACT
TATTTTGATTTAATAAAATCCAAAATTAATCGTGATTTTGATGAGAGATT
TTAGCATCTTTTTGTGAACAATAATACCGACTTTTTCACGTATTAAttca
aattagattttttagTGCATCAGCAACAATCtcataaaatttagtaaaac
tctcaaaacaaaaaatctactTCAACCCGATGTTTTGATTTAGGAAGCTA
TGCTTTTTAAACTTATTAAGGACTTGAGGTTTTCTGGTTAAGAAAATGTC
CTTAACACGCAGGATTTAGTTTAGACTGGGTAAGAAGAATGAAGTCTTTG
TAAACAAAAACTTATACCGAAAAAAGagcttttaatttaatttataacCC
AAGAACtgtaaaaaagatattttattaATATTGACCGTGTAGTATTTATT
GAatagaacaaaaacaaaaataaaatcata
Run BLAST on NCBI

protein sequence of unclassified Wnt ligand 9

>TCONS_00056741-protein ID=TCONS_00056741-protein|Name=unclassified Wnt ligand 9|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MIGFGMKTRLAIIYCACVLFSLFGACSNVELKMNDIESMNPYVLCSSIPK
YIKKGTNLKCSMEKQKLTNVYRGIRVAAKECRYQFQMRPWNCSAAFESAP
RITYYPIPETAFLYAINSAGIAYSLAWACYEGKTKDCMCEKQKSVNITTE
TLLKHQANQKSPEQPHIMEDRKCAKHSLQYGIEESMQLLENKHENDIRWR
MDNHNKQAGRLALIDGPINKNRVCSCHGVSGACTISKCTLKLPKFGDVSD
YLMEKYKSAVRMGSNNHGHLIPHRDTLNKKPTENDLVYLQESPSFCSKDK
KYGILGTKDRVCDPKSKGPQGCDVLCCNRGSEKIVEVEKRQCKCKFKYCC
EVKCQTCEKRVELDVCK
Run BLAST on NCBI

transcript from alignment at scaffold_282:295680..300816+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056741 ID=TCONS_00056741|Name=TCONS_00056741|organism=Clytia hemisphaerica|type=transcript|length=5137bp|location=Sequence derived from alignment at scaffold_282:295680..300816+ (Clytia hemisphaerica)
TATAAAAAGAAAAGCTAAGCATCGTTGTACTCATATTTAAGTAAAAGAGC ATAGTAGTGCAACGCGAGAGGGTATAAGGGTACTAACACAGTGGGACAGC GAACCCTACAAAAAAGACTAACCATCAATTGATATTCTCGCATAAAGAAG TACATACTACATACACAAAAGAAacaacattttgattttgaatacaCACG ACAGACTGAGTGGACAAGGAAGCTTCATTTTACGTGATACATTTTGAACT ACAAGGATTATTAGACCAACAAAATAATAATCGAGACGAGACAAAATCTG AAGAGCTTGAAGGATTTATGTATGGTTTTTTATCGCGCAAGATTACTATC ACATCTTAAATCTTGATTTTACTATTAACATCATCTTTCGAACCTTAAAA TctttaaactaaaaaaaatgattGGCTTTGGAATGAAAACGAGGTTGGCA ATCATCTACTGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAA CGTCGAATTAAAAATGTAAGTCCTGCATGTCTGGTTAAATTTTCATCATA TTTTTAatacctgtcaaaatttgaccGCAGGTTCGTTTGTATATTATATC ATTAAGGTTTACATGATTTTGCGTAATTAGCGCACTTTTGTTTGTAATTA TTTCAGGGATGGTCGTGGTGTTAAATAATAGAATTGACTGAAAGCTGACC AGGAAAGGGGAGATTAGGCTCATAAAGCACCTTAAAACATCTgatcgaaa tcatcaaaattcaaatatttttgttttttacagGAACGATATTGAATCAA TGAACCCATACGTTCTCTGTAGTTCCATTCCAAAATACATCAAGAAAGGA ACGAATCTCAAATGTTCAATGGAGAAACAAAAATTGACCAACGTTTACCG TGGTATTCGAGTTGCAGCCAAAGAATGTCGATATCAATTTCAGATGAGAC CGTGGAATTGTTCAGCTGCTTTCGAATCTGCACCAAGGATCACCTATTAT CGTGAGTACAGACATTTTTTTGAGTTCTTAAAATCTTTCTCAAACATCGG CGTAGATACAAGTAAACCAAACTAAAACCATTTGGTAGAATGTGACTAGT AGGATTTGAGGTTCCTTGCACTTCCCGTGGAACCTgaaaaaaatgtcata ttttttGGTTTTCTGTAAATCGAAGGCTTTTAGGAAGAATTAATCAAACA ATACTAAATCACTCCATTGTATCTAAACTTCAAGAAGTGAGACATTTTCG CGCCGGAATGTTGTTTTTCGTCTAAGCATGAGGACTGAAATCTAATTAAC CCGGGGATGTTATCGGAATTGCGGCAACAGTAATTCAGTACGaaggaatt caaaaattttataggAAGGATGTAAGCCCATCTGTACAATTtggtgaaaa caatcgaaaactcTTCGCCTTAGCGACTATGAAGCAAATAAGCAggaaaa caacacaaaaaggaGAGAATAGAgaaatagtttgaaaattgaGCAAAATT TGTTCTATTTCCGCGCAACTAATTTCCCATCTCATTTACtaatttgaaaa tatgtgaAGTTAAGTGGTAGactaatttcaaattaaaagaaaaattaatt aagaGTAATTTATGCGATAATTACCCTCATTGATAGAGCGTTTACCAATT GCCAACAGAAATCCACAACTTAATATCTGTATACACCAAAAGCTTAACAC TCATATTGAATTCTTAAAACCATACAATTAAAGGGTATCAGCTCAGATAT AGTTAACCTGTTTCGAAGGATTTAATGATCCTATTATTGGATTAAGCACT GAGTCAAAATCTTCTACAACTTGTTAAGGAAACTCAACCTTTGATACAAC TTCTAAATCGTCTCCAATACGGGAAGTCAACAATCGAACTGTGATTCTTC CCAACTAACCAGATTCCACCAAACCCAAAACCTTCACCGCTTTTATGCCA GCAAATGATAAGATACAGATGACCTAAACTAGATGCTTGTTAGACTAGTA ACCCTACTGTGGCGTTCGTAAAACAAGAGGATTAGGGAAATAGGCtattt ataattgaaaagacATAAACGAATAATAAAGATTATCCTTATTGAGAATT TTGTAAacagaattttttaaagaatttgaaTATGACCAGCTTAAGCTTAC ACAGCTAGCCAGCTATAAACATTGCATCGTTTCGCAATAAATTTTTAGTA AACTTGACACTGAGAATAAGTcagtttaaaaatcaatttgataAAAACTC TTTATCATATATCTTTAAGATTAATAATCTTAATTCGACATTTCAAGTCA TGTTTTAAAAACTATAGATTTGAAAtgtatgacgtcatcaaaactggTGT CAAATACATAAGTACTCCTCCCTTCAGCAGGAAAACTTTGAGAAGCTCAA AAGTGGGGATCACANATTACGTCATCAAAACTGGCGTCAAATATATAAGT GCTCCTCCCTTCAGCAGGAAAACTTTGAGAAGCTCAAAAGTGGGGATCAC AGAATGACCCACCTATAACTTGAAACATCTGTTAACGCTACAAGACgcta ttagaaaaaaaaatcgaagaaaaaaataagcctgagaaaattttaatgtt ttatgcTGAGGTTTGCAAAAAATGGTTTGACACACCTGAAAGGCTATATC CCTGTATCGTATGTAAAATCGATTCATTAAGTATGTCAGAGAGAGGATCA GCATGAAAATCGCCTCCTCCTTCTAAAGACAGCAGAGCGAGaaaaaaaac tggaaatttcTCCTACGCAGCAAAATTTCACCCAAATTTGTCACAGTCAG GCTTTTAAAAATTCATAGTATCATTCATGACCATTTAAGTATAAAAATCA CATGCTATGTTCAACAGGTCACAGAACTGAGATAAGAAAGTAGCATTTTG TTGATGAACAGGGATTTATTGACCACCTACAGAGCTTTCTTGTACCTACA AAAcagatttaaaaacattttggaCAGATTCCAAAATGATTCAATACTCT AAGCTTTCACTTTAACTAATGGCTAGATTGTACACATTATAACATGTTAT GTATATTTATCCTCCAAACTAACAAACATTCAATTTCATATTTACAGCTA TCCCTGAAACTGCATTCTTGTATGCCATCAATTCAGCCGGCATCGCTTAC TCCTTGGCGTGGGCGTGTTACGAAGGCAAAACAAAAGACTGTATGTGTGA AAAACAAAAATCGGTAAACATCACAACcgaaacattacttaaacatcaAG CCAATCAGAAATCCCCGGAACAACCGCATATAATGGAGGACCGTAAATGC GCGAAACACAGTTTACAATATGGAATTGAAGAATCAATGCAATTGTTGGA AAACAAACATGAGAACGATATCCGATGGCGAATGGATAACCATAATAAAC AAGCTGGACGATTGGTGAGTTTCTTTTCCCATAATTCAATGCGCTGAATG GGATAGGATTCTGGGTAATAAGCAAAGAGTGATACATCTAGTTAAAGGCA ATATCAGAGAGTTGAGGATATTTCTTTCCTTAGTTCTTAACGAGATGTcg aaatattttcataattacTTAGAAATTTGTATAACTGCCATATTTTATCA AACAGGGGTaattaaatattttggttttaagtCCAGCCCAGAAAATTAGA TTGTTGTTATACAGTCATTGTGGAAATCTAAACAGTTCTCTATCTATCAA ATTAACTGATGCTAGACGTTCCAGAAATATTGTTTTGTCTAGAAAGTTCA CGATAGCAAATCTTGTTGGAAATACCAtatataatgatttttttctcgtG TGTTTAGGCTCTTATCGATGGACCAATCAACAAGAATCGAGTATGCAGCT GTCACGGTGTATCTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTA CCGAAATTTGGTGATGTTTCAGATTATCTAATGGAGAAATATAAATCAGC CGTCCGAATGGGTTCCAATAACCATGGACACTTGATCCCACATCGAGACA CTTTGAACAAAAAACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGT CCAAGTTTTTGCTCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGA TCGTGTTTGCGACCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGT GTTGCAATCGTGGGTCAGAGAAAATTGTAGAAGTTGAAAAACGACAATGT AAATGTAAGTTTAAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAA ACGAGTAGAATTAGATGTCTGCAAATAGGTGACGAGATTGagtaaagatg gcggagaagttGTGAATCCAAGATGCGGGATGAAGTAGCGAAGTGATAGC AAAGACTTCACTAACAAGTAAATCATTGAACGGGAATCATTTCGGATGCA GCTCTCTATAAAACTCAAGAACgtgtttttgaagaattttatcATACCGT TCAATGTCAATTCATTGGGTAAATGAAGACTCGGGCGTTGGGCgtacaaa acaaagaaaaggacATGTAATCATAGCTTTATCAGAAAAAAGAagtttat attatttattacagaaacaaattattatttttttaattgatatttataat tttgatattttatatgGAATATTTTTATCATACCCACAAAGCTTAAATTG CTTAAATCAGCGCGAAGCTTTCGaaaattaaaatagaaattgcaTCATGG CATTACTTATTTTGATTTAATAAAATCCAAAATTAATCGTGATTTTGATG AGAGATTTTAGCATCTTTTTGTGAACAATAATACCGACTTTTTCACGTAT TAAttcaaattagattttttagTGCATCAGCAACAATCtcataaaattta gtaaaactctcaaaacaaaaaatctactTCAACCCGATGTTTTGATTTAG GAAGCTATGCTTTTTAAACTTATTAAGGACTTGAGGTTTTCTGGTTAAGA AAATGTCCTTAACACGCAGGATTTAGTTTAGACTGGGTAAGAAGAATGAA GTCTTTGTAAACAAAAACTTATACCGAAAAAAGagcttttaatttaattt ataacCCAAGAACtgtaaaaaagatattttattaATATTGACCGTGTAGT ATTTATTGAatagaacaaaaacaaaaataaaatcata

Coding sequence (CDS) from alignment at scaffold_282:295680..300816+

>TCONS_00056741 ID=TCONS_00056741|Name=TCONS_00056741|organism=Clytia hemisphaerica|type=CDS|length=4416bp|location=Sequence derived from alignment at scaffold_282:295680..300816+ (Clytia hemisphaerica)
atgattGGCTTTGGAATGAAAACGAGGTTGGCAATCATCTACTGCGCATG
CGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATTAAAAATGA
ACGATATTGAATCAATGAACCCATACGTTCTCTGTAGTTCCATTCCAAAA
TACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGAGAAACAAAAATT
GACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAGAATGTCGATATC
AATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTCGAATCTGCACCA
AGGATCACCTATTATCCTATCCCTGAAACTGCATTCTTGTATGCCATCAA
TTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTTACGAAGGCAAAA
CAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAACATCACAACcgaa
acattacttaaacatcaAGCCAATCAGAAATCCCCGGAACAACCGCATAT
AATGGAGGACCGTAAATGCGCGAAACACAGTTTACAATATGGAATTGAAG
AATCAATGCAATTGTTGGAAAACAAACATGAGAACGATATCCGATGGCGA
ATGGATAACCATAATAAACAAGCTGGACGATTGGCTCTTATCGATGGACC
AATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTATCTGGAGCTTGTA
CTATTTCAAAATGTACATTGAAATTACCGAAATTTGGTGATGTTTCAGAT
TATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGGTTCCAATAACCA
TGGACACTTGATCCCACATCGAGACACTTTGAACAAAAAACCAACAGAGA
ATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGCTCTAAGGACAAA
AAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGACCCGAAGAGTAA
AGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTGGGTCAGAGAAAA
TTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTTAAGTATTGCTGT
GAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATTAGATGTCTGCAA
ATAGatgattGGCTTTGGAATGAAAACGAGGTTGGCAATCATCTACTGCG
CATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATTAAAA
ATGAACGATATTGAATCAATGAACCCATACGTTCTCTGTAGTTCCATTCC
AAAATACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGAGAAACAAA
AATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAGAATGTCGA
TATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTCGAATCTGC
ACCAAGGATCACCTATTATCCTATCCCTGAAACTGCATTCTTGTATGCCA
TCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTTACGAAGGC
AAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAACATCACAAC
cgaaacattacttaaacatcaAGCCAATCAGAAATCCCCGGAACAACCGC
ATATAATGGAGGACCGTAAATGCGCGAAACACAGTTTACAATATGGAATT
GAAGAATCAATGCAATTGTTGGAAAACAAACATGAGAACGATATCCGATG
GCGAATGGATAACCATAATAAACAAGCTGGACGATTGGCTCTTATCGATG
GACCAATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTATCTGGAGCT
TGTACTATTTCAAAATGTACATTGAAATTACCGAAATTTGGTGATGTTTC
AGATTATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGGTTCCAATA
ACCATGGACACTTGATCCCACATCGAGACACTTTGAACAAAAAACCAACA
GAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGCTCTAAGGA
CAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGACCCGAAGA
GTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTGGGTCAGAG
AAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTTAAGTATTG
CTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATTAGATGTCT
GCAAATAGatgattGGCTTTGGAATGAAAACGAGGTTGGCAATCATCTAC
TGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATT
AAAAATGAACGATATTGAATCAATGAACCCATACGTTCTCTGTAGTTCCA
TTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGAGAAA
CAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAGAATG
TCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTCGAAT
CTGCACCAAGGATCACCTATTATCCTATCCCTGAAACTGCATTCTTGTAT
GCCATCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTTACGA
AGGCAAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAACATCA
CAACcgaaacattacttaaacatcaAGCCAATCAGAAATCCCCGGAACAA
CCGCATATAATGGAGGACCGTAAATGCGCGAAACACAGTTTACAATATGG
AATTGAAGAATCAATGCAATTGTTGGAAAACAAACATGAGAACGATATCC
GATGGCGAATGGATAACCATAATAAACAAGCTGGACGATTGGCTCTTATC
GATGGACCAATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTATCTGG
AGCTTGTACTATTTCAAAATGTACATTGAAATTACCGAAATTTGGTGATG
TTTCAGATTATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGGTTCC
AATAACCATGGACACTTGATCCCACATCGAGACACTTTGAACAAAAAACC
AACAGAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGCTCTA
AGGACAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGACCCG
AAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTGGGTC
AGAGAAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTTAAGT
ATTGCTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATTAGAT
GTCTGCAAATAGatgattGGCTTTGGAATGAAAACGAGGTTGGCAATCAT
CTACTGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCG
AATTAAAAATGAACGATATTGAATCAATGAACCCATACGTTCTCTGTAGT
TCCATTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGA
GAAACAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAG
AATGTCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTC
GAATCTGCACCAAGGATCACCTATTATCCTATCCCTGAAACTGCATTCTT
GTATGCCATCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTT
ACGAAGGCAAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAAC
ATCACAACcgaaacattacttaaacatcaAGCCAATCAGAAATCCCCGGA
ACAACCGCATATAATGGAGGACCGTAAATGCGCGAAACACAGTTTACAAT
ATGGAATTGAAGAATCAATGCAATTGTTGGAAAACAAACATGAGAACGAT
ATCCGATGGCGAATGGATAACCATAATAAACAAGCTGGACGATTGGCTCT
TATCGATGGACCAATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTAT
CTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTACCGAAATTTGGT
GATGTTTCAGATTATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGG
TTCCAATAACCATGGACACTTGATCCCACATCGAGACACTTTGAACAAAA
AACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGC
TCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGA
CCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTG
GGTCAGAGAAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTT
AAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATT
AGATGTCTGCAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035748XLOC_035748Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056741-exon-scaffold_282-1491911889:295680..296194TCONS_00056741-exon-scaffold_282-1491911889:295680..296194Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1510915933:295680..296194TCONS_00056741-exon-scaffold_282-1510915933:295680..296194Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1575043694:295680..296194TCONS_00056741-exon-scaffold_282-1575043694:295680..296194Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1491911889:296463..296680TCONS_00056741-exon-scaffold_282-1491911889:296463..296680Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1510915933:296463..296680TCONS_00056741-exon-scaffold_282-1510915933:296463..296680Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1575043694:296463..296680TCONS_00056741-exon-scaffold_282-1575043694:296463..296680Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1491911889:298777..299093TCONS_00056741-exon-scaffold_282-1491911889:298777..299093Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1510915933:298777..299093TCONS_00056741-exon-scaffold_282-1510915933:298777..299093Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1575043694:298777..299093TCONS_00056741-exon-scaffold_282-1575043694:298777..299093Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1491911889:299487..300816TCONS_00056741-exon-scaffold_282-1491911889:299487..300816Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1510915933:299487..300816TCONS_00056741-exon-scaffold_282-1510915933:299487..300816Clytia hemisphaericaexon
TCONS_00056741-exon-scaffold_282-1575043694:299487..300816TCONS_00056741-exon-scaffold_282-1575043694:299487..300816Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
unclassified Wnt ligand 9TCONS_00056741-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:295680..300816 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (48.7142 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0159357 0.0185029 0.0181022 39.9542 27.6019 13.2992 16.227 6.36211 22.4645 1.5894 3.0256 9.45544 7.65249 1.37334 1.46385 18.5609 15.0636 22.583 18.8325 7.18902 9.03997 2.17349 2.35079 5.64959 3.36664 48.7142 25.5163 0.507863 0.221757
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056741 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
2004006008001000120014001600180020002200Expect = 1.00e-53 / Id = 33.51SequenceWNT4
Match NameE-valueIdentityDescription
WNT41.003e-5333.51Protein Wnt-4 OS=Homo sapiens GN=WNT4 PE=1 SV=4[more]
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