Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056741 ID=TCONS_00056741|Name=TCONS_00056741|organism=Clytia hemisphaerica|type=transcript|length=2380bp TATAAAAAGAAAAGCTAAGCATCGTTGTACTCATATTTAAGTAAAAGAGC ATAGTAGTGCAACGCGAGAGGGTATAAGGGTACTAACACAGTGGGACAGC GAACCCTACAAAAAAGACTAACCATCAATTGATATTCTCGCATAAAGAAG TACATACTACATACACAAAAGAAacaacattttgattttgaatacaCACG ACAGACTGAGTGGACAAGGAAGCTTCATTTTACGTGATACATTTTGAACT ACAAGGATTATTAGACCAACAAAATAATAATCGAGACGAGACAAAATCTG AAGAGCTTGAAGGATTTATGTATGGTTTTTTATCGCGCAAGATTACTATC ACATCTTAAATCTTGATTTTACTATTAACATCATCTTTCGAACCTTAAAA TctttaaactaaaaaaaatgattGGCTTTGGAATGAAAACGAGGTTGGCA ATCATCTACTGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAA CGTCGAATTAAAAATGAACGATATTGAATCAATGAACCCATACGTTCTCT GTAGTTCCATTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTCA ATGGAGAAACAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGC CAAAGAATGTCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTG CTTTCGAATCTGCACCAAGGATCACCTATTATCCTATCCCTGAAACTGCA TTCTTGTATGCCATCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGC GTGTTACGAAGGCAAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGG TAAACATCACAACcgaaacattacttaaacatcaAGCCAATCAGAAATCC CCGGAACAACCGCATATAATGGAGGACCGTAAATGCGCGAAACACAGTTT ACAATATGGAATTGAAGAATCAATGCAATTGTTGGAAAACAAACATGAGA ACGATATCCGATGGCGAATGGATAACCATAATAAACAAGCTGGACGATTG GCTCTTATCGATGGACCAATCAACAAGAATCGAGTATGCAGCTGTCACGG TGTATCTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTACCGAAAT TTGGTGATGTTTCAGATTATCTAATGGAGAAATATAAATCAGCCGTCCGA ATGGGTTCCAATAACCATGGACACTTGATCCCACATCGAGACACTTTGAA CAAAAAACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTT TTTGCTCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTT TGCGACCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAA TCGTGGGTCAGAGAAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTA AGTTTAAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTA GAATTAGATGTCTGCAAATAGGTGACGAGATTGagtaaagatggcggaga agttGTGAATCCAAGATGCGGGATGAAGTAGCGAAGTGATAGCAAAGACT TCACTAACAAGTAAATCATTGAACGGGAATCATTTCGGATGCAGCTCTCT ATAAAACTCAAGAACgtgtttttgaagaattttatcATACCGTTCAATGT CAATTCATTGGGTAAATGAAGACTCGGGCGTTGGGCgtacaaaacaaaga aaaggacATGTAATCATAGCTTTATCAGAAAAAAGAagtttatattattt attacagaaacaaattattatttttttaattgatatttataattttgata ttttatatgGAATATTTTTATCATACCCACAAAGCTTAAATTGCTTAAAT CAGCGCGAAGCTTTCGaaaattaaaatagaaattgcaTCATGGCATTACT TATTTTGATTTAATAAAATCCAAAATTAATCGTGATTTTGATGAGAGATT TTAGCATCTTTTTGTGAACAATAATACCGACTTTTTCACGTATTAAttca aattagattttttagTGCATCAGCAACAATCtcataaaatttagtaaaac tctcaaaacaaaaaatctactTCAACCCGATGTTTTGATTTAGGAAGCTA TGCTTTTTAAACTTATTAAGGACTTGAGGTTTTCTGGTTAAGAAAATGTC CTTAACACGCAGGATTTAGTTTAGACTGGGTAAGAAGAATGAAGTCTTTG TAAACAAAAACTTATACCGAAAAAAGagcttttaatttaatttataacCC AAGAACtgtaaaaaagatattttattaATATTGACCGTGTAGTATTTATT GAatagaacaaaaacaaaaataaaatcata Run BLAST on NCBI protein sequence of unclassified Wnt ligand 9 >TCONS_00056741-protein ID=TCONS_00056741-protein|Name=unclassified Wnt ligand 9|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MIGFGMKTRLAIIYCACVLFSLFGACSNVELKMNDIESMNPYVLCSSIPK YIKKGTNLKCSMEKQKLTNVYRGIRVAAKECRYQFQMRPWNCSAAFESAP RITYYPIPETAFLYAINSAGIAYSLAWACYEGKTKDCMCEKQKSVNITTE TLLKHQANQKSPEQPHIMEDRKCAKHSLQYGIEESMQLLENKHENDIRWR MDNHNKQAGRLALIDGPINKNRVCSCHGVSGACTISKCTLKLPKFGDVSD YLMEKYKSAVRMGSNNHGHLIPHRDTLNKKPTENDLVYLQESPSFCSKDK KYGILGTKDRVCDPKSKGPQGCDVLCCNRGSEKIVEVEKRQCKCKFKYCC EVKCQTCEKRVELDVCK Run BLAST on NCBI transcript from alignment at scaffold_282:295680..300816+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056741 ID=TCONS_00056741|Name=TCONS_00056741|organism=Clytia hemisphaerica|type=transcript|length=5137bp|location=Sequence derived from alignment at scaffold_282:295680..300816+ (Clytia hemisphaerica) TATAAAAAGAAAAGCTAAGCATCGTTGTACTCATATTTAAGTAAAAGAGC
ATAGTAGTGCAACGCGAGAGGGTATAAGGGTACTAACACAGTGGGACAGC
GAACCCTACAAAAAAGACTAACCATCAATTGATATTCTCGCATAAAGAAG
TACATACTACATACACAAAAGAAacaacattttgattttgaatacaCACG
ACAGACTGAGTGGACAAGGAAGCTTCATTTTACGTGATACATTTTGAACT
ACAAGGATTATTAGACCAACAAAATAATAATCGAGACGAGACAAAATCTG
AAGAGCTTGAAGGATTTATGTATGGTTTTTTATCGCGCAAGATTACTATC
ACATCTTAAATCTTGATTTTACTATTAACATCATCTTTCGAACCTTAAAA
TctttaaactaaaaaaaatgattGGCTTTGGAATGAAAACGAGGTTGGCA
ATCATCTACTGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAA
CGTCGAATTAAAAATGTAAGTCCTGCATGTCTGGTTAAATTTTCATCATA
TTTTTAatacctgtcaaaatttgaccGCAGGTTCGTTTGTATATTATATC
ATTAAGGTTTACATGATTTTGCGTAATTAGCGCACTTTTGTTTGTAATTA
TTTCAGGGATGGTCGTGGTGTTAAATAATAGAATTGACTGAAAGCTGACC
AGGAAAGGGGAGATTAGGCTCATAAAGCACCTTAAAACATCTgatcgaaa
tcatcaaaattcaaatatttttgttttttacagGAACGATATTGAATCAA
TGAACCCATACGTTCTCTGTAGTTCCATTCCAAAATACATCAAGAAAGGA
ACGAATCTCAAATGTTCAATGGAGAAACAAAAATTGACCAACGTTTACCG
TGGTATTCGAGTTGCAGCCAAAGAATGTCGATATCAATTTCAGATGAGAC
CGTGGAATTGTTCAGCTGCTTTCGAATCTGCACCAAGGATCACCTATTAT
CGTGAGTACAGACATTTTTTTGAGTTCTTAAAATCTTTCTCAAACATCGG
CGTAGATACAAGTAAACCAAACTAAAACCATTTGGTAGAATGTGACTAGT
AGGATTTGAGGTTCCTTGCACTTCCCGTGGAACCTgaaaaaaatgtcata
ttttttGGTTTTCTGTAAATCGAAGGCTTTTAGGAAGAATTAATCAAACA
ATACTAAATCACTCCATTGTATCTAAACTTCAAGAAGTGAGACATTTTCG
CGCCGGAATGTTGTTTTTCGTCTAAGCATGAGGACTGAAATCTAATTAAC
CCGGGGATGTTATCGGAATTGCGGCAACAGTAATTCAGTACGaaggaatt
caaaaattttataggAAGGATGTAAGCCCATCTGTACAATTtggtgaaaa
caatcgaaaactcTTCGCCTTAGCGACTATGAAGCAAATAAGCAggaaaa
caacacaaaaaggaGAGAATAGAgaaatagtttgaaaattgaGCAAAATT
TGTTCTATTTCCGCGCAACTAATTTCCCATCTCATTTACtaatttgaaaa
tatgtgaAGTTAAGTGGTAGactaatttcaaattaaaagaaaaattaatt
aagaGTAATTTATGCGATAATTACCCTCATTGATAGAGCGTTTACCAATT
GCCAACAGAAATCCACAACTTAATATCTGTATACACCAAAAGCTTAACAC
TCATATTGAATTCTTAAAACCATACAATTAAAGGGTATCAGCTCAGATAT
AGTTAACCTGTTTCGAAGGATTTAATGATCCTATTATTGGATTAAGCACT
GAGTCAAAATCTTCTACAACTTGTTAAGGAAACTCAACCTTTGATACAAC
TTCTAAATCGTCTCCAATACGGGAAGTCAACAATCGAACTGTGATTCTTC
CCAACTAACCAGATTCCACCAAACCCAAAACCTTCACCGCTTTTATGCCA
GCAAATGATAAGATACAGATGACCTAAACTAGATGCTTGTTAGACTAGTA
ACCCTACTGTGGCGTTCGTAAAACAAGAGGATTAGGGAAATAGGCtattt
ataattgaaaagacATAAACGAATAATAAAGATTATCCTTATTGAGAATT
TTGTAAacagaattttttaaagaatttgaaTATGACCAGCTTAAGCTTAC
ACAGCTAGCCAGCTATAAACATTGCATCGTTTCGCAATAAATTTTTAGTA
AACTTGACACTGAGAATAAGTcagtttaaaaatcaatttgataAAAACTC
TTTATCATATATCTTTAAGATTAATAATCTTAATTCGACATTTCAAGTCA
TGTTTTAAAAACTATAGATTTGAAAtgtatgacgtcatcaaaactggTGT
CAAATACATAAGTACTCCTCCCTTCAGCAGGAAAACTTTGAGAAGCTCAA
AAGTGGGGATCACANATTACGTCATCAAAACTGGCGTCAAATATATAAGT
GCTCCTCCCTTCAGCAGGAAAACTTTGAGAAGCTCAAAAGTGGGGATCAC
AGAATGACCCACCTATAACTTGAAACATCTGTTAACGCTACAAGACgcta
ttagaaaaaaaaatcgaagaaaaaaataagcctgagaaaattttaatgtt
ttatgcTGAGGTTTGCAAAAAATGGTTTGACACACCTGAAAGGCTATATC
CCTGTATCGTATGTAAAATCGATTCATTAAGTATGTCAGAGAGAGGATCA
GCATGAAAATCGCCTCCTCCTTCTAAAGACAGCAGAGCGAGaaaaaaaac
tggaaatttcTCCTACGCAGCAAAATTTCACCCAAATTTGTCACAGTCAG
GCTTTTAAAAATTCATAGTATCATTCATGACCATTTAAGTATAAAAATCA
CATGCTATGTTCAACAGGTCACAGAACTGAGATAAGAAAGTAGCATTTTG
TTGATGAACAGGGATTTATTGACCACCTACAGAGCTTTCTTGTACCTACA
AAAcagatttaaaaacattttggaCAGATTCCAAAATGATTCAATACTCT
AAGCTTTCACTTTAACTAATGGCTAGATTGTACACATTATAACATGTTAT
GTATATTTATCCTCCAAACTAACAAACATTCAATTTCATATTTACAGCTA
TCCCTGAAACTGCATTCTTGTATGCCATCAATTCAGCCGGCATCGCTTAC
TCCTTGGCGTGGGCGTGTTACGAAGGCAAAACAAAAGACTGTATGTGTGA
AAAACAAAAATCGGTAAACATCACAACcgaaacattacttaaacatcaAG
CCAATCAGAAATCCCCGGAACAACCGCATATAATGGAGGACCGTAAATGC
GCGAAACACAGTTTACAATATGGAATTGAAGAATCAATGCAATTGTTGGA
AAACAAACATGAGAACGATATCCGATGGCGAATGGATAACCATAATAAAC
AAGCTGGACGATTGGTGAGTTTCTTTTCCCATAATTCAATGCGCTGAATG
GGATAGGATTCTGGGTAATAAGCAAAGAGTGATACATCTAGTTAAAGGCA
ATATCAGAGAGTTGAGGATATTTCTTTCCTTAGTTCTTAACGAGATGTcg
aaatattttcataattacTTAGAAATTTGTATAACTGCCATATTTTATCA
AACAGGGGTaattaaatattttggttttaagtCCAGCCCAGAAAATTAGA
TTGTTGTTATACAGTCATTGTGGAAATCTAAACAGTTCTCTATCTATCAA
ATTAACTGATGCTAGACGTTCCAGAAATATTGTTTTGTCTAGAAAGTTCA
CGATAGCAAATCTTGTTGGAAATACCAtatataatgatttttttctcgtG
TGTTTAGGCTCTTATCGATGGACCAATCAACAAGAATCGAGTATGCAGCT
GTCACGGTGTATCTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTA
CCGAAATTTGGTGATGTTTCAGATTATCTAATGGAGAAATATAAATCAGC
CGTCCGAATGGGTTCCAATAACCATGGACACTTGATCCCACATCGAGACA
CTTTGAACAAAAAACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGT
CCAAGTTTTTGCTCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGA
TCGTGTTTGCGACCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGT
GTTGCAATCGTGGGTCAGAGAAAATTGTAGAAGTTGAAAAACGACAATGT
AAATGTAAGTTTAAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAA
ACGAGTAGAATTAGATGTCTGCAAATAGGTGACGAGATTGagtaaagatg
gcggagaagttGTGAATCCAAGATGCGGGATGAAGTAGCGAAGTGATAGC
AAAGACTTCACTAACAAGTAAATCATTGAACGGGAATCATTTCGGATGCA
GCTCTCTATAAAACTCAAGAACgtgtttttgaagaattttatcATACCGT
TCAATGTCAATTCATTGGGTAAATGAAGACTCGGGCGTTGGGCgtacaaa
acaaagaaaaggacATGTAATCATAGCTTTATCAGAAAAAAGAagtttat
attatttattacagaaacaaattattatttttttaattgatatttataat
tttgatattttatatgGAATATTTTTATCATACCCACAAAGCTTAAATTG
CTTAAATCAGCGCGAAGCTTTCGaaaattaaaatagaaattgcaTCATGG
CATTACTTATTTTGATTTAATAAAATCCAAAATTAATCGTGATTTTGATG
AGAGATTTTAGCATCTTTTTGTGAACAATAATACCGACTTTTTCACGTAT
TAAttcaaattagattttttagTGCATCAGCAACAATCtcataaaattta
gtaaaactctcaaaacaaaaaatctactTCAACCCGATGTTTTGATTTAG
GAAGCTATGCTTTTTAAACTTATTAAGGACTTGAGGTTTTCTGGTTAAGA
AAATGTCCTTAACACGCAGGATTTAGTTTAGACTGGGTAAGAAGAATGAA
GTCTTTGTAAACAAAAACTTATACCGAAAAAAGagcttttaatttaattt
ataacCCAAGAACtgtaaaaaagatattttattaATATTGACCGTGTAGT
ATTTATTGAatagaacaaaaacaaaaataaaatcata Coding sequence (CDS) from alignment at scaffold_282:295680..300816+ >TCONS_00056741 ID=TCONS_00056741|Name=TCONS_00056741|organism=Clytia hemisphaerica|type=CDS|length=4416bp|location=Sequence derived from alignment at scaffold_282:295680..300816+ (Clytia hemisphaerica) atgattGGCTTTGGAATGAAAACGAGGTTGGCAATCATCTACTGCGCATG CGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATTAAAAATGA ACGATATTGAATCAATGAACCCATACGTTCTCTGTAGTTCCATTCCAAAA TACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGAGAAACAAAAATT GACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAGAATGTCGATATC AATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTCGAATCTGCACCA AGGATCACCTATTATCCTATCCCTGAAACTGCATTCTTGTATGCCATCAA TTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTTACGAAGGCAAAA CAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAACATCACAACcgaa acattacttaaacatcaAGCCAATCAGAAATCCCCGGAACAACCGCATAT AATGGAGGACCGTAAATGCGCGAAACACAGTTTACAATATGGAATTGAAG AATCAATGCAATTGTTGGAAAACAAACATGAGAACGATATCCGATGGCGA ATGGATAACCATAATAAACAAGCTGGACGATTGGCTCTTATCGATGGACC AATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTATCTGGAGCTTGTA CTATTTCAAAATGTACATTGAAATTACCGAAATTTGGTGATGTTTCAGAT TATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGGTTCCAATAACCA TGGACACTTGATCCCACATCGAGACACTTTGAACAAAAAACCAACAGAGA ATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGCTCTAAGGACAAA AAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGACCCGAAGAGTAA AGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTGGGTCAGAGAAAA TTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTTAAGTATTGCTGT GAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATTAGATGTCTGCAA ATAGatgattGGCTTTGGAATGAAAACGAGGTTGGCAATCATCTACTGCG CATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATTAAAA ATGAACGATATTGAATCAATGAACCCATACGTTCTCTGTAGTTCCATTCC AAAATACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGAGAAACAAA AATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAGAATGTCGA TATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTCGAATCTGC ACCAAGGATCACCTATTATCCTATCCCTGAAACTGCATTCTTGTATGCCA TCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTTACGAAGGC AAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAACATCACAAC cgaaacattacttaaacatcaAGCCAATCAGAAATCCCCGGAACAACCGC ATATAATGGAGGACCGTAAATGCGCGAAACACAGTTTACAATATGGAATT GAAGAATCAATGCAATTGTTGGAAAACAAACATGAGAACGATATCCGATG GCGAATGGATAACCATAATAAACAAGCTGGACGATTGGCTCTTATCGATG GACCAATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTATCTGGAGCT TGTACTATTTCAAAATGTACATTGAAATTACCGAAATTTGGTGATGTTTC AGATTATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGGTTCCAATA ACCATGGACACTTGATCCCACATCGAGACACTTTGAACAAAAAACCAACA GAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGCTCTAAGGA CAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGACCCGAAGA GTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTGGGTCAGAG AAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTTAAGTATTG CTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATTAGATGTCT GCAAATAGatgattGGCTTTGGAATGAAAACGAGGTTGGCAATCATCTAC TGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATT AAAAATGAACGATATTGAATCAATGAACCCATACGTTCTCTGTAGTTCCA TTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGAGAAA CAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAGAATG TCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTCGAAT CTGCACCAAGGATCACCTATTATCCTATCCCTGAAACTGCATTCTTGTAT GCCATCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTTACGA AGGCAAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAACATCA CAACcgaaacattacttaaacatcaAGCCAATCAGAAATCCCCGGAACAA CCGCATATAATGGAGGACCGTAAATGCGCGAAACACAGTTTACAATATGG AATTGAAGAATCAATGCAATTGTTGGAAAACAAACATGAGAACGATATCC GATGGCGAATGGATAACCATAATAAACAAGCTGGACGATTGGCTCTTATC GATGGACCAATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTATCTGG AGCTTGTACTATTTCAAAATGTACATTGAAATTACCGAAATTTGGTGATG TTTCAGATTATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGGTTCC AATAACCATGGACACTTGATCCCACATCGAGACACTTTGAACAAAAAACC AACAGAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGCTCTA AGGACAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGACCCG AAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTGGGTC AGAGAAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTTAAGT ATTGCTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATTAGAT GTCTGCAAATAGatgattGGCTTTGGAATGAAAACGAGGTTGGCAATCAT CTACTGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCG AATTAAAAATGAACGATATTGAATCAATGAACCCATACGTTCTCTGTAGT TCCATTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTCAATGGA GAAACAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAG AATGTCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTC GAATCTGCACCAAGGATCACCTATTATCCTATCCCTGAAACTGCATTCTT GTATGCCATCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCGTGTT ACGAAGGCAAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGGTAAAC ATCACAACcgaaacattacttaaacatcaAGCCAATCAGAAATCCCCGGA ACAACCGCATATAATGGAGGACCGTAAATGCGCGAAACACAGTTTACAAT ATGGAATTGAAGAATCAATGCAATTGTTGGAAAACAAACATGAGAACGAT ATCCGATGGCGAATGGATAACCATAATAAACAAGCTGGACGATTGGCTCT TATCGATGGACCAATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTAT CTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTACCGAAATTTGGT GATGTTTCAGATTATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGG TTCCAATAACCATGGACACTTGATCCCACATCGAGACACTTTGAACAAAA AACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGC TCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGA CCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTG GGTCAGAGAAAATTGTAGAAGTTGAAAAACGACAATGTAAATGTAAGTTT AAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATT AGATGTCTGCAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056741-exon-scaffold_282-1491911889:295680..296194 | TCONS_00056741-exon-scaffold_282-1491911889:295680..296194 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1510915933:295680..296194 | TCONS_00056741-exon-scaffold_282-1510915933:295680..296194 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1575043694:295680..296194 | TCONS_00056741-exon-scaffold_282-1575043694:295680..296194 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1491911889:296463..296680 | TCONS_00056741-exon-scaffold_282-1491911889:296463..296680 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1510915933:296463..296680 | TCONS_00056741-exon-scaffold_282-1510915933:296463..296680 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1575043694:296463..296680 | TCONS_00056741-exon-scaffold_282-1575043694:296463..296680 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1491911889:298777..299093 | TCONS_00056741-exon-scaffold_282-1491911889:298777..299093 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1510915933:298777..299093 | TCONS_00056741-exon-scaffold_282-1510915933:298777..299093 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1575043694:298777..299093 | TCONS_00056741-exon-scaffold_282-1575043694:298777..299093 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1491911889:299487..300816 | TCONS_00056741-exon-scaffold_282-1491911889:299487..300816 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1510915933:299487..300816 | TCONS_00056741-exon-scaffold_282-1510915933:299487..300816 | Clytia hemisphaerica | exon |
TCONS_00056741-exon-scaffold_282-1575043694:299487..300816 | TCONS_00056741-exon-scaffold_282-1575043694:299487..300816 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_282 | supercontig | scaffold_282:295680..300816 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR005817 | Wnt |
Vocabulary: Molecular Function
Term | Definition |
GO:0005102 | receptor binding |
Vocabulary: Biological Process
Term | Definition |
GO:0007275 | multicellular organism development |
GO:0016055 | Wnt signaling pathway |
Vocabulary: Cellular Component
Term | Definition |
GO:0005576 | extracellular region |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0007275 |
multicellular organism development |
biological_process |
GO:0016055 |
Wnt signaling pathway |
cellular_component |
GO:0005576 |
extracellular region |
molecular_function |
GO:0005102 |
receptor binding |
Blast
BLAST of TCONS_00056741 vs. Swiss-Prot (Human)
Match: WNT4 (Protein Wnt-4 OS=Homo sapiens GN=WNT4 PE=1 SV=4) HSP 1 Score: 191.045 bits (484), Expect = 1.003e-53 Identity = 123/367 (33.51%), Postives = 199/367 (54.22%), Query Frame = 1 Query: 469 VLFSLFGACSNVEL---KMNDIESMNPYVLCSSIPKYIKKGTNLKCSMEKQKLTNVYRGIRVAAKECRYQFQMRPWNCSAAFESAP---RITYYPIPETAFLYAINSAGIAYSLAWACYEGKTKDCMCEKQKSVNITTETLLKHQANQKSPEQPHIMEDRKCAKHSLQYGIEESMQLLE----NKHENDIRWRMDNHNKQAGRLALIDGPINKNRV-CSCHGVSGACTISKCTLKLPKFGDVSDYLMEKYKSAV-----RMGSNNHGHLIPHRDTLNKKPTENDLVYLQESPSFCSKDKKYGILGTKDRVCDPKSKGPQGCDVLCCNRGSEKI-VEVEKRQCKCKFKYCCEVKCQTCEKRVELDVCK 1518
++F++F A ++ L K++ + S++ C + I++ + C + + +V RG ++A +EC+YQF+ R WNCS +S P ++ E AF+YAI+SAG+A+++ AC G+ + C C++ +V+ + P + C+ + + YG+ S ++ +K + R M+ HN +AGR A++ RV C CHGVSG+C + C +P F V L EK+ A R+GS+ L+P R+ K T+ DLVYL+ SP FC +D + G+LGT+ R C+ SK GC++LCC RG VE+ +R C CKF +CC VKC+ C++ VEL C+
Sbjct: 13 LVFAVFSAAASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQM-CKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCST-LDSLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELEKCGCDR--TVHGVS---------------PQGFQWSGCSDN-IAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAIL----THMRVECKCHGVSGSCEVKTCWRAVPPFRQVGHALKEKFDGATEVEPRRVGSSRA--LVP-RNAQFKPHTDEDLVYLEPSPDFCEQDMRSGVLGTRGRTCNKTSKAIDGCELLCCGRGFHTAQVELAER-CSCKFHWCCFVKCRQCQRLVELHTCR 351
The following BLAST results are available for this feature:
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