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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056971 ID=TCONS_00056971|Name=TCONS_00056971|organism=Clytia hemisphaerica|type=transcript|length=888bp
actttattacaattttttctttggaaataaaaaaatttcctaaaaatctt
caattttccgacccttagagagactaatttaaaactttctgatttttccg
acccttagagagNACCAATGCTTGAAGATATAAAACGAAAATtcaatgat
gacgtcacttatcAGggGCGAAATTACATGTTGAAGATCCAGTCAGATCG
AACAGAAATGTTGTACTGGCTCCAACAGGAACGTCGCACGCAACGCATTC
AAGAATTGAACAACAAATTCCAACTGACTCCTTTGTCGACTGTCGATCTC
TCGGCGCCTGTTAATTGATCGCAAATTTTTGATTGCTTTTAGGAGATGTC
TGTATGATGTTACCCGGGACATGGAATCGTGTCCTGTCAAAGAGGGATGA
TCGTAAAATTATTCGAGATCTTGGAATAGGTTTATAATGTATTAAACAAA
GAACACAAAACACAGGAGTATCTAAAGGCCGCTActcactcagcatttta
tggtcggcaGCACATTTTCCCTTTATTTTGTTTGAGCGGAATGAGAAAAG
CGTTCAGCGACCAAAGCGCTCTAGCCGTGCGCCTTGttcgccgaccataa
aatggtgagtgggtagcggccttaATGTTAATTATTTGtacattgatatt
tttaattcgGATAAATTGTAATATATATTGATGATTAGTAGAGTGTACTC
ACGGAgttattattttcttatttataaattatattttaactgtatataac
attttttgatgaTTGATTGAAGAGTGGTTTGTCGTTTTTCACTTGTTTTC
CAATCTTTTCCCAAAATACTTGGCTTACATCATCAAACAACCAAGACAAA
CAAATCAAagagataatcagatggtttgagatctTTCG Run BLAST on NCBI transcript from alignment at scaffold_284:1290317..1291477- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056971 ID=TCONS_00056971|Name=TCONS_00056971|organism=Clytia hemisphaerica|type=transcript|length=1161bp|location=Sequence derived from alignment at scaffold_284:1290317..1291477- (Clytia hemisphaerica)
ACTTTATTACAATTTTTTCTTTGGAAATAAAAAAATTTCCTAAAAATCTT
CAATTTTCCGACCCTTAGAGAGACTAATTTAAAACTTTCTGATTTTTCCG
ACCCTTAGAGAGNACCAATGCTTGAAGATATAAAACGAAAATTCAATGAT
GACGTCACTTATCAGGTAAAGCTTGCTTTTGTTGCGTTTGACCAGGCTAA
AATATAGTTTGGTTAATAATTGAATAATTTCTTATTGAAATAGTTATTCC
TTATTTCTAGCATCTTAAAACTTTGACAATTGAATATTTTTTCGCCATCA
TTCCTTCCATTTAATTACAACGTTTTTATAAGACTTCTACCTTCGGATAT
GCTTTATTTTTTGGGGGGGTTTAAAAAGGAAGATTGAGAATGATCCTTCT
GATATTTAAGTTCCATTTTTGTTCAATTTCAATTTCAGGGGCGAAATTAC
ATGTTGAAGATCCAGTCAGATCGAACAGAAATGTTGTACTGGCTCCAACA
GGAACGTCGCACGCAACGCATTCAAGAATTGAACAACAAATTCCAACTGA
CTCCTTTGTCGACTGTCGATCTCTCGGCGCCTGTTAATTGATCGCAAATT
TTTGATTGCTTTTAGGAGATGTCTGTATGATGTTACCCGGGACATGGAAT
CGTGTCCTGTCAAAGAGGGATGATCGTAAAATTATTCGAGATCTTGGAAT
AGGTTTATAATGTATTAAACAAAGAACACAAAACACAGGAGTATCTAAAG
GCCGCTACTCACTCAGCATTTTATGGTCGGCAGCACATTTTCCCTTTATT
TTGTTTGAGCGGAATGAGAAAAGCGTTCAGCGACCAAAGCGCTCTAGCCG
TGCGCCTTGTTCGCCGACCATAAAATGGTGAGTGGGTAGCGGCCTTAATG
TTAATTATTTGTACATTGATATTTTTAATTCGGATAAATTGTAATATATA
TTGATGATTAGTAGAGTGTACTCACGGAGTTATTATTTTCTTATTTATAA
ATTATATTTTAACTGTATATAACATTTTTTGATGATTGATTGAAGAGTGG
TTTGTCGTTTTTCACTTGTTTTCCAATCTTTTCCCAAAATACTTGGCTTA
CATCATCAAACAACCAAGACAAACAAATCAAAGAGATAATCAGATGGTTT
GAGATCTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056971-exon-scaffold_284-1575043694:1291313..1291477 | TCONS_00056971-exon-scaffold_284-1575043694:1291313..1291477 | Clytia hemisphaerica | exon |
| TCONS_00056971-exon-scaffold_284-1575043694:1290317..1291039 | TCONS_00056971-exon-scaffold_284-1575043694:1290317..1291039 | Clytia hemisphaerica | exon |
| TCONS_00056971-exon-scaffold_284-1510915933:1291313..1291477 | TCONS_00056971-exon-scaffold_284-1510915933:1291313..1291477 | Clytia hemisphaerica | exon |
| TCONS_00056971-exon-scaffold_284-1510915933:1290317..1291039 | TCONS_00056971-exon-scaffold_284-1510915933:1290317..1291039 | Clytia hemisphaerica | exon |
| TCONS_00056971-exon-scaffold_284-1491911889:1291313..1291477 | TCONS_00056971-exon-scaffold_284-1491911889:1291313..1291477 | Clytia hemisphaerica | exon |
| TCONS_00056971-exon-scaffold_284-1491911889:1290317..1291039 | TCONS_00056971-exon-scaffold_284-1491911889:1290317..1291039 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:1290317..1291477 - |
Blast
The following BLAST results are available for this feature:
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