TCONS_00057094 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057094
Unique NameTCONS_00057094
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2561

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057094 ID=TCONS_00057094|Name=TCONS_00057094|organism=Clytia hemisphaerica|type=transcript|length=2561bp
cgcccaTATCAGTGCCTGTAGAcaaagagtaaggcctaaaggCCTGGAGC
TGTCTACTATGTAGACTAATAAAATGTtgaatttaatttactttttcatt
ttttttcacagGGGTAGTGCGGACACGGTCAACTCCACCTTGCATTGATT
TGAGCAAAATCTCTGTTGGTGTACCACGATTGGAGCTTTCTGCTTCTGAA
GATGAAACTTCTTTGAAACGAACTCCACGGAGGAGGCCACGAAACTCTCT
TTCTACAAAGAAAAGACCAAGCGCCGACGCTATCCGCACTCCACCGTTGA
GTCCAAGTGAAGGTTCCGATGATACGCCTCGCTTCAGCCCTTCCTCCCTC
CGCCCTCCCATTTTAATAACGCGCAACAATCGTGGTTGGGGCTTCACTTT
TAAAGCGATTCGAGTTTATATTGGAGATACATCGAAGTATACTATGCAAC
ATATGGTGGAGACTGTGGACACACGTGGACCTGCTTTCGAAGTCGGGCTA
AAAGAAAACGATTTGATAACACATGTGAACAATGAAGCTATCCAGGGTTA
CCAACACGTCGACGTCGTCCGACTCATTTTACGGTCCGGAGAAACAGTCA
AACTGACCGTGACCGATATTGAAAGGACGTCAATCCGTACAGGCTCGAAA
CGAAAAACAGTCGGAAATCGCGTCCAATCAAGGAAATTACGCGGGAGAAG
CCGGAACAGTTCAGTTGAAGATAGTGGACGTAGTTCAGCCGGTGGTGCTA
TATCACGGAAATCGGCTATATACCGGAAACTTCGTAAACCGTCCTTACGT
AGGAATTCATCTTTAAAACGAGCTAAGAAATCTAACTTGTTCATTCCGGG
TGCATCTTTTGACGCCCGTCGTGCAGCAAATGCAATGGAGGGCGGTGATC
AAGCCAACGCCTCATCCGCCACTAGTCCGACGGGCGGAGGATCGACATCA
CCAAACTCACCCAATACTCATAGCTCAAAAAATGCATTTCTTCATGGGAT
GCTTCCGAAGTTGGCTCGTACCGTTGGCGCGCATTCCCGGCGTCGCTCCA
TTTCCTGCATTCCGGTTTCGCCATTGGCACGCACTCCTTCTATAGGGGCT
GCTTCTGTACGAAGTCCTTCTCCCTTAGCAACTAAAAATGGTGGCACAGT
CATGTCACCAACGAACAATTTTACGAGACCGAAATCATCGACAATGACAC
CCGGTTCACCATTACTACGGCGTGCTTTATCGCCGGATAGACTAAATGCG
CCGGTACAGTTCGAAGACTTAGTGAATAGTAGAGATGGAACGCTTCTCGT
TCCTGCAAATGAAACAGGGGTGGACCGTAGACTGAATAGAAGTCAATCAA
TGAAAGAGAATAAAAGGAAAAAACATCGGAGGTAGTCAAACGCCCCTGTA
CCGCCCTTATTCTTAAGGTTGCATATCTCAAGTTGTCACTGGAAAGTTTT
TCGACGCAATTGTAAATTGATAGGATACATCGCACCATTGTTTGTATATA
TGAAAGCGGAAGGAAGtattcgttggaaagatatcaaAGAGAACAGATAG
GGGAATGATTTTTTGGAGCTCTCCGGTGACCGTACTGTACATACCGAATA
TAATTTTTTGCTACCgaaattgttttttatatttattgaaaaaaaatcgt
gtGTTGTGTCGCGGAGCATACGTCTAAACAAAGCTTTTGTTTACAAATTG
ATGAGAGAAATACACTTTGTCACAGAGTTGAAATGACTTCGGACGAATAT
ATTGTGTGGCAATCAGCCAAGCAGTTCCTTGCCCTTGATTGAGGAATTTA
CGAAGACTTTGAACGAAATGCAAAACGACAATAGCGTCTACCCTGTTTCG
CGATGAGTGGTTGAGACAAAGCACAATACCGTAAACCCTGTGATCTTGGA
TTGGATGTCTGATTTCTAAGATGTTATCTGTGACTGAGCAGTGATCATCG
AGATACAAATATTGCACTAACATCCTACGAGGAGTGATATTGTAAAGCAG
TTTACCGCCCTTGAGGTACTTCCACCCTCTGGGCGGAATATAGAAGTCAT
CCCCATTTCTTAACTTATCTACGCATACATactgtaaaaagtaattcaag
AATTATGCACCCCTGTATCGCTTAATCGAATAAAAACGAATATCTCAGTC
TGGATATGAAAGTGTGGTTATATTATTGATAATATTGCATGTCGGTTAAT
TAGAGTCGTATCTTGATCGGGTACCATGCTACCGTTAGTTgctctaatgt
cgacatccatCTTCTTATTTCGGCACACTTTTTTCTgatcgctaagcaaa
gaaaaatagtttccatcagcgattccgaccttcatattattcctatctct
taAGAAAGGTGTCGATATTAAACCGACTTACGGTTTTTGACTGTCAACTG
CTGATTGGTTTAATCTTAAATCTACTTCATCCAGAGTTTCTTTATCATCT
TTAAAAGTTCAATGTTCAGTCCACATTTTGTTTGCTTTACCCTTCTTCAA
TCATTACTTCTAAAAAACCGAACTTACCGTACTTTCTTCTCAGCTGCCTA
GTAAAcgcccc
Run BLAST on NCBI

protein sequence of TCONS_00057094-protein

>TCONS_00057094-protein ID=TCONS_00057094-protein|Name=TCONS_00057094-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGE
TVKLTVTDIERTSIRTGSKRKTVGNRVQSRKLRGRSRNSSVEDSGRSSAG
GAISRKSAIYRKLRKPSLRRNSSLKRAKKSNLFIPGASFDARRAANAMEG
GDQANASSATSPTGGGSTSPNSPNTHSSKNAFLHGMLPKLARTVGAHSRR
RSISCIPVSPLARTPSIGAASVRSPSPLATKNGGTVMSPTNNFTRPKSST
MTPGSPLLRRALSPDRLNAPVQFEDLVNSRDGTLLVPANETGVDRRLNRS
QSMKENKRKKHRR
Run BLAST on NCBI

transcript from alignment at scaffold_285:30833..34171-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057094 ID=TCONS_00057094|Name=TCONS_00057094|organism=Clytia hemisphaerica|type=transcript|length=3339bp|location=Sequence derived from alignment at scaffold_285:30833..34171- (Clytia hemisphaerica)
CGCCCATATCAGTGCCTGTAGACAAAGAGTAAGGCCTAAAGGCCTGGAGC
TGTCTACTATGTAGACTAATAAAATGTTGAATTTAATTTACTTTTTCATT
TTTTTTCACAGGGGTAGTGCGGACACGGTCAACTCCACCTTGCATTGATT
TGAGCAAAATCTCTGTTGGTGTACCACGATTGGAGCTTTCTGGTGAGTGA
GAATATACTCTGATGATTGAGTGGTCTTGGTTAACACTGACAAGTAGTAT
TTATGGGGTTTTTGTTTTATTTTCTCATTCTAAGGTCCCTTTGTGCCGAT
CTTTTCATTTTTCGATATAGCCAGTCATACGTCCTGGATGATCATATAGG
TCATATAGGTAAGTAAAAAACTTTTTTACACGAAATTCCATTTCTTCTTC
TCCTTTGATATTGTAGCTTCTGAAGATGAAACTTCTTTGAAACGAACTCC
ACGGAGGAGGCCACGAAACTCTCTTTCTACAAAGAAAAGACCAAGCGCCG
ACGCTATCCGCACTCCACCGTTGAGTCCAAGTGAAGGTTCCGATGATACG
CCTCGCTTCAGCCCTTCCTCCCTCCGCCCTCCCATTTTAATAACGCGCAA
CAATCGTGGTTGGGGCTTCACTTTTAAAGCGATTCGAGTTTATATTGGAG
ATACATCGAAGTATACTATGCAACATATGGTGGAGGTAATCAATTTGTTT
TCGTGTGTTATGGAGATAGATTTAATCACTTGTCAATTCATCAGATAACC
ATAACATCTGAAGGAGACTGGGTTAATAATTTCAAATCATCAGGCTCAGT
ACGTTAATGGCCTTGATCTTCGTTCAAATTTTACTTCTTTCTAGATCTTC
GTGTAATTGGGTTTCCTACTTTTCTATCTAACTGAAGTTACGTTTCTTCT
AAATTTAGACTGTGGACACACGTGGACCTGCTTTCGAAGTCGGGCTAAAA
GAAAACGATTTGATAACACATGTGAACAATGAAGCTATCCAGGGTTACCA
ACACGTCGACGTCGTCCGACTCATTTTACGGTCCGGAGAAACAGTCAAAC
TGACCGTGACCGATATTGAAAGGACGTCAATCCGTACAGGCTCGAAACGA
AAAACAGTCGGAAATCGCGTCCAATCAAGGAAATTACGCGGGAGAAGCCG
GAACAGTTCAGTTGAAGATAGTGGACGTAGTTCAGCCGGTGGTGCTATAT
CACGGAAATCGGCTATATACCGGAAACTTCGTAAACCGTCCTTACGTAGG
AATTCATCTTTAAAACGAGCTAAGAAATCTAACTTGTTCATTCCGGGTGC
ATCTTTTGACGCCCGTCGTGCAGCAAATGCAATGGAGGGCGGTGATCAAG
CCAACGCCTCATCCGCCACTAGTCCGACGGGCGGAGGATCGACATCACCA
AACTCACCCAATACTCATAGCTCAAAAAATGGTAAGGTTTTGGCATTTTG
ATTATTTTCGTTTCAAATAAATACTTTTTAAACAAACTTACCATTAACTT
AACTTACCATTTGCTTAAAGCTGTTAAAATTTATTTGAATTCTTTAGTTT
TGAAAACAATAACATATTTTCTTAAAGATCAATCCTCTTAAAAGCATTTG
AATTAAAGTTAGGTCTATGAATGATTGCAATCCGTTGCAAGTCTCTTATT
ACGCTGATATGGTGTTCATATTGTAGCAAAAAACGTTCTTAAAGCGAACG
GACTCCAGGCCAAGACGTTTCACTTTTCTAAATCATTTCTCATATTATCC
TTCTCATCTTAGCATTTCTTCATGGGATGCTTCCGAAGTTGGCTCGTACC
GTTGGCGCGCATTCCCGGCGTCGCTCCATTTCCTGCATTCCGGTTTCGCC
ATTGGCACGCACTCCTTCTATAGGGGCTGCTTCTGTACGAAGTCCTTCTC
CCTTAGCAACTAAAAATGGTGGCACAGTCATGTCACCAACGAACAATTTT
ACGAGACCGAAATCATCGACAATGACACCCGGTTCACCATTACTACGGCG
TGCTTTATCGCCGGATAGACTAAATGCGCCGGTACAGTTCGAAGACTTAG
TGAATAGTAGAGATGGAACGCTTCTCGTTCCTGCAAATGAAACAGGGGTG
GACCGTAGACTGAATAGAAGTCAATCAATGAAAGAGAATAAAAGGAAAAA
ACATCGGAGGTAGTCAAACGCCCCTGTACCGCCCTTATTCTTAAGGTTGC
ATATCTCAAGTTGTCACTGGAAAGTTTTTCGACGCAATTGTAAATTGATA
GGATACATCGCACCATTGTTTGTATATATGAAAGCGGAAGGAAGTATTCG
TTGGAAAGATATCAAAGAGAACAGATAGGGGAATGATTTTTTGGAGCTCT
CCGGTGACCGTACTGTACATACCGAATATAATTTTTTGCTACCGAAATTG
TTTTTTATATTTATTGAAAAAAAATCGTGTGTTGTGTCGCGGAGCATACG
TCTAAACAAAGCTTTTGTTTACAAATTGATGAGAGAAATACACTTTGTCA
CAGAGTTGAAATGACTTCGGACGAATATATTGTGTGGCAATCAGCCAAGC
AGTTCCTTGCCCTTGATTGAGGAATTTACGAAGACTTTGAACGAAATGCA
AAACGACAATAGCGTCTACCCTGTTTCGCGATGAGTGGTTGAGACAAAGC
ACAATACCGTAAACCCTGTGATCTTGGATTGGATGTCTGATTTCTAAGAT
GTTATCTGTGACTGAGCAGTGATCATCGAGATACAAATATTGCACTAACA
TCCTACGAGGAGTGATATTGTAAAGCAGTTTACCGCCCTTGAGGTACTTC
CACCCTCTGGGCGGAATATAGAAGTCATCCCCATTTCTTAACTTATCTAC
GCATACATACTGTAAAAAGTAATTCAAGAATTATGCACCCCTGTATCGCT
TAATCGAATAAAAACGAATATCTCAGTCTGGATATGAAAGTGTGGTTATA
TTATTGATAATATTGCATGTCGGTTAATTAGAGTCGTATCTTGATCGGGT
ACCATGCTACCGTTAGTTGCTCTAATGTCGACATCCATCTTCTTATTTCG
GCACACTTTTTTCTGATCGCTAAGCAAAGAAAAATAGTTTCCATCAGCGA
TTCCGACCTTCATATTATTCCTATCTCTTAAGAAAGGTGTCGATATTAAA
CCGACTTACGGTTTTTGACTGTCAACTGCTGATTGGTTTAATCTTAAATC
TACTTCATCCAGAGTTTCTTTATCATCTTTAAAAGTTCAATGTTCAGTCC
ACATTTTGTTTGCTTTACCCTTCTTCAATCATTACTTCTAAAAAACCGAA
CTTACCGTACTTTCTTCTCAGCTGCCTAGTAAACGCCCC

Coding sequence (CDS) from alignment at scaffold_285:30833..34171-

>TCONS_00057094 ID=TCONS_00057094|Name=TCONS_00057094|organism=Clytia hemisphaerica|type=CDS|length=2826bp|location=Sequence derived from alignment at scaffold_285:30833..34171- (Clytia hemisphaerica)
CATTTCTTCATGGGATGCTTCCGAAGTTGGCTCGTACCGTTGGCGCGCAT
TCCCGGCGTCGCTCCATTTCCTGCATTCCGGTTTCGCCATTGGCACGCAC
TCCTTCTATAGGGGCTGCTTCTGTACGAAGTCCTTCTCCCTTAGCAACTA
AAAATGGTGGCACAGTCATGTCACCAACGAACAATTTTACGAGACCGAAA
TCATCGACAATGACACCCGGTTCACCATTACTACGGCGTGCTTTATCGCC
GGATAGACTAAATGCGCCGGTACAGTTCGAAGACTTAGTGAATAGTAGAG
ATGGAACGCTTCTCGTTCCTGCAAATGAAACAGGGGTGGACCGTAGACTG
AATAGAAGTCAATCAATGAAAGAGAATAAAAGGAAAAAACATCGGAGGTA
GACTGTGGACACACGTGGACCTGCTTTCGAAGTCGGGCTAAAAGAAAACG
ATTTGATAACACATGTGAACAATGAAGCTATCCAGGGTTACCAACACGTC
GACGTCGTCCGACTCATTTTACGGTCCGGAGAAACAGTCAAACTGACCGT
GACCGATATTGAAAGGACGTCAATCCGTACAGGCTCGAAACGAAAAACAG
TCGGAAATCGCGTCCAATCAAGGAAATTACGCGGGAGAAGCCGGAACAGT
TCAGTTGAAGATAGTGGACGTAGTTCAGCCGGTGGTGCTATATCACGGAA
ATCGGCTATATACCGGAAACTTCGTAAACCGTCCTTACGTAGGAATTCAT
CTTTAAAACGAGCTAAGAAATCTAACTTGTTCATTCCGGGTGCATCTTTT
GACGCCCGTCGTGCAGCAAATGCAATGGAGGGCGGTGATCAAGCCAACGC
CTCATCCGCCACTAGTCCGACGGGCGGAGGATCGACATCACCAAACTCAC
CCAATACTCATAGCTCAAAAAATGATGCAACATATGGTGGAGCATTTCTT
CATGGGATGCTTCCGAAGTTGGCTCGTACCGTTGGCGCGCATTCCCGGCG
TCGCTCCATTTCCTGCATTCCGGTTTCGCCATTGGCACGCACTCCTTCTA
TAGGGGCTGCTTCTGTACGAAGTCCTTCTCCCTTAGCAACTAAAAATGGT
GGCACAGTCATGTCACCAACGAACAATTTTACGAGACCGAAATCATCGAC
AATGACACCCGGTTCACCATTACTACGGCGTGCTTTATCGCCGGATAGAC
TAAATGCGCCGGTACAGTTCGAAGACTTAGTGAATAGTAGAGATGGAACG
CTTCTCGTTCCTGCAAATGAAACAGGGGTGGACCGTAGACTGAATAGAAG
TCAATCAATGAAAGAGAATAAAAGGAAAAAACATCGGAGGTAGACTGTGG
ACACACGTGGACCTGCTTTCGAAGTCGGGCTAAAAGAAAACGATTTGATA
ACACATGTGAACAATGAAGCTATCCAGGGTTACCAACACGTCGACGTCGT
CCGACTCATTTTACGGTCCGGAGAAACAGTCAAACTGACCGTGACCGATA
TTGAAAGGACGTCAATCCGTACAGGCTCGAAACGAAAAACAGTCGGAAAT
CGCGTCCAATCAAGGAAATTACGCGGGAGAAGCCGGAACAGTTCAGTTGA
AGATAGTGGACGTAGTTCAGCCGGTGGTGCTATATCACGGAAATCGGCTA
TATACCGGAAACTTCGTAAACCGTCCTTACGTAGGAATTCATCTTTAAAA
CGAGCTAAGAAATCTAACTTGTTCATTCCGGGTGCATCTTTTGACGCCCG
TCGTGCAGCAAATGCAATGGAGGGCGGTGATCAAGCCAACGCCTCATCCG
CCACTAGTCCGACGGGCGGAGGATCGACATCACCAAACTCACCCAATACT
CATAGCTCAAAAAATGATGCAACATATGGTGGAGCATTTCTTCATGGGAT
GCTTCCGAAGTTGGCTCGTACCGTTGGCGCGCATTCCCGGCGTCGCTCCA
TTTCCTGCATTCCGGTTTCGCCATTGGCACGCACTCCTTCTATAGGGGCT
GCTTCTGTACGAAGTCCTTCTCCCTTAGCAACTAAAAATGGTGGCACAGT
CATGTCACCAACGAACAATTTTACGAGACCGAAATCATCGACAATGACAC
CCGGTTCACCATTACTACGGCGTGCTTTATCGCCGGATAGACTAAATGCG
CCGGTACAGTTCGAAGACTTAGTGAATAGTAGAGATGGAACGCTTCTCGT
TCCTGCAAATGAAACAGGGGTGGACCGTAGACTGAATAGAAGTCAATCAA
TGAAAGAGAATAAAAGGAAAAAACATCGGAGGTAGACTGTGGACACACGT
GGACCTGCTTTCGAAGTCGGGCTAAAAGAAAACGATTTGATAACACATGT
GAACAATGAAGCTATCCAGGGTTACCAACACGTCGACGTCGTCCGACTCA
TTTTACGGTCCGGAGAAACAGTCAAACTGACCGTGACCGATATTGAAAGG
ACGTCAATCCGTACAGGCTCGAAACGAAAAACAGTCGGAAATCGCGTCCA
ATCAAGGAAATTACGCGGGAGAAGCCGGAACAGTTCAGTTGAAGATAGTG
GACGTAGTTCAGCCGGTGGTGCTATATCACGGAAATCGGCTATATACCGG
AAACTTCGTAAACCGTCCTTACGTAGGAATTCATCTTTAAAACGAGCTAA
GAAATCTAACTTGTTCATTCCGGGTGCATCTTTTGACGCCCGTCGTGCAG
CAAATGCAATGGAGGGCGGTGATCAAGCCAACGCCTCATCCGCCACTAGT
CCGACGGGCGGAGGATCGACATCACCAAACTCACCCAATACTCATAGCTC
AAAAAATGATGCAACATATGGTGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035965XLOC_035965Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057094-proteinTCONS_00057094-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057094-exon-scaffold_285-1575043694:33980..34171TCONS_00057094-exon-scaffold_285-1575043694:33980..34171Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1575043694:33487..33755TCONS_00057094-exon-scaffold_285-1575043694:33487..33755Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1575043694:32741..33263TCONS_00057094-exon-scaffold_285-1575043694:32741..33263Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1575043694:30833..32409TCONS_00057094-exon-scaffold_285-1575043694:30833..32409Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1510915933:33980..34171TCONS_00057094-exon-scaffold_285-1510915933:33980..34171Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1510915933:33487..33755TCONS_00057094-exon-scaffold_285-1510915933:33487..33755Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1510915933:32741..33263TCONS_00057094-exon-scaffold_285-1510915933:32741..33263Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1510915933:30833..32409TCONS_00057094-exon-scaffold_285-1510915933:30833..32409Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1491911889:33980..34171TCONS_00057094-exon-scaffold_285-1491911889:33980..34171Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1491911889:33487..33755TCONS_00057094-exon-scaffold_285-1491911889:33487..33755Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1491911889:32741..33263TCONS_00057094-exon-scaffold_285-1491911889:32741..33263Clytia hemisphaericaexon
TCONS_00057094-exon-scaffold_285-1491911889:30833..32409TCONS_00057094-exon-scaffold_285-1491911889:30833..32409Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_285supercontigscaffold_285:30833..34171 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.41518	4.92763	7.5489	8.92266	16.192	12.4094	27.0726	30.8098	24.8883	26.2622	22.4648	22.8946	16.8135	17.6902	8.30828	10.0834	17.9931	17.3746	24.501	23.2056	17.253	17.6062	9.56419	12.4375	26.3656	24.3835	7.25982	7.83618	7.96926	8.80172
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00057094 vs. Swiss-Prot (Human)
Match: MAST2 (Microtubule-associated serine/threonine-protein kinase 2 OS=Homo sapiens GN=MAST2 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.927e-28
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 3 
Query:  345 SLRPPILITRNNRGWGFTFKAIRVYIGDTSKYTMQHMVETVDTRGPAFEVGLKENDLITHVNNEAIQGYQHVDVVRLILRSGETVKLTVTDIERTSIRTGSKRK 656
            S+RPPI+I R  + +GFT +AIRVY+GD+  YT+ HMV  V+  GPA E GL++ DLITHVN E + G  H +VV LIL+SG  V ++ T +E TSI+ G  RK
Sbjct: 1100 SMRPPIIIHRAGKKYGFTLRAIRVYMGDSDVYTVHHMVWHVEDGGPASEAGLRQGDLITHVNGEPVHGLVHTEVVELILKSGNKVAISTTPLENTSIKVGPARK 1203
The following BLAST results are available for this feature:
BLAST of TCONS_00057094 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAST21.927e-2852.88Microtubule-associated serine/threonine-protein ki... [more]
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