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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057198 ID=TCONS_00057198|Name=TCONS_00057198|organism=Clytia hemisphaerica|type=transcript|length=1040bp
AGCCACAAGATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCA
CACCAATGTGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCC
TGAAACAAAGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAA
AAGATTGTTACATTAAACCATGCGCATTGGaacCGGATGATTGTTTATTC
GACGGGCAAGGAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATA
CATGTGGAAAAGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTG
ATTCTGATCATACAACACAGAACACTACTAAAAACGGTCACTACATGCTT
GCTGAATCATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAG
TAAAGTGTTCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATA
GCATGCATGGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCG
TATTCAGgaaaagaaaataaagtttgGGAAATGATAGGTCCACAAGGTCC
AGGATGGAAAGTAGCTGAAGTAGACATCCCTGAAAAACCTGATAATTACA
ATGAAAGGAATTCTTATATCTTTCTTGACTACAAGATACGTTTCGAAGCA
GAGCGTGGACACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTAT
TGTTAACTCGCTATGTTCCAAGAAAAAAACACTTGTTCCGATACTGAGCA
CCACCCCAACGACCACCActactacaacaacgaccaccactACTACAGCA
ACGACCACCCCAACTACAGCAACGACCACcccaactacaacaacgaccac
tccaactacaacaacgaccactccaacGACTACAACGACCACCCCAACAA
CTACCACGTCCACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAG
AAGGCTAATACTTAAGAAATGAAATCTAATCTAATCTAAAAGGGAAGGCT
AATCGCCAGAAGTGGATGAAATTTCGCTATAATGTTGTTG Run BLAST on NCBI protein sequence of TCONS_00057198-protein >TCONS_00057198-protein ID=TCONS_00057198-protein|Name=TCONS_00057198-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
PQDGHWGRWSSWGECSHQCGEGKEKRTRKCDDPETKNGGKNCPGESVQSK
DCYIKPCALEPDDCLFDGQGMCFWQDKSYDKSYMWKRVTGGTPTPSTGPD
SDHTTQNTTKNGHYMLAESSSPARLGMKASLVSKVFKSTTSVKCLTFFYS
MHGMGIGVLRVFVKFPYSGKENKVWEMIGPQGPGWKVAEVDIPEKPDNYN
ERNSYIFLDYKIRFEAERGHSFQGDIALDDIFIVNSLCSKKKTLVPILST
TPTTTTTTTTTTTTTATTTPTTATTTPTTTTTTPTTTTTTPTTTTTTPTT
TTSTPTTTTGMSDTL Run BLAST on NCBI transcript from alignment at scaffold_286:646645..651338+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057198 ID=TCONS_00057198|Name=TCONS_00057198|organism=Clytia hemisphaerica|type=transcript|length=4694bp|location=Sequence derived from alignment at scaffold_286:646645..651338+ (Clytia hemisphaerica)
AGCCACAAGATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCA
CACCAATGTGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCC
TGAAACAAAGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAA
AAGATTGTTACATTAAACCATGCGCATTGGGTATGATATATTCGATGATA
CTGTCAGGTTTTTTTATGATATCGTAGATTTTTTGTGcattagctctagt
ttagacggtcgactttctgccctgtATATTCAATCGTTGAAGTGTGCTAA
AGATACGctgcgacttgacagacgcAAGCTTCCAAGCCCTGGCGTATAAC
ATGACACCtgaacgacactgggagagcgatgTTCACGTGAGGCCAAACCT
AATGAGTGCCATGGCACGTCATTATGCCAGCCACACTCTTGGGCAAAAAG
CGGGCAAAAAGTTGGCAgttatttgcttgaaaaagattgaaagaagacat
tgcacattgacgtcaaaagatggAAATGCATGTACTTTAAACAGCCAATA
TTCTGCCCGCTTtcattcacaattagaatagggaGGACGAAAAGTGGGCC
GTTTATACTGGAACTTAGAACTTCAACCAGCTTAAAAGTCAAGCACAGTG
GAAAAGTCACTTTAACGACGAGAGTTTCCTCTAGAAAAACAACCTTTTTA
AAAGGATATTAGAACCATCCCCAAGATTTGTTCAAATATGTCTAACACCA
TTTCAAAAACCATGTGATAAAACCATATGATACGGTGGAGTCTCTTGAAC
Tagaatctctataactcgaacaagttttatggtctcttcagttaacaatg
ggcttttccagaaaaaaattgaatatggggggggggtggaggataacAAT
TTTCAGTAATTTACCCCCcagacaaagtgacttttgaccccccggacaac
gggttttaccccctggacaagcatcagttgacccccggacaacccaaaat
tacccctggacagagcaaatttaccccccggacaatatatcctccacccc
catgtacggacattttctggaagagcccaatgccTTTTAAAAACGTTACT
CCATAATTCGAAATTcctttaattcgaacaaatttgcgttccccTGTCCG
TGTTATTgagattttgataaattttggaGGTCATCTTCGCTATAACTCGT
AACTGGCCACTTAGCTTGTTGGATTCATTCATTTATTAACGAAGATGTCG
acaatatttgaaatttttagaacCGGATGATTGTTTATTCGACGGGCAAG
GAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATACATGTGGAAA
AGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTGATTCTGATCA
TACAACACAGAACACTACTAAAAACGGTAAGAAGATTATATTTCAACTga
tatattcacttttttttgaacGATACTTCGATGATTGCATGAGAACGTGA
GATTCCTGAGATGTGACGAAAACTTGAAAACTGATTCAGAACAATCTTAA
CCTTTTGTTTTGGAAACATTTCAATGTAGATAAGATCTTTTAGCCCCTAT
ATCATCTCATGCTCAAGGGTTTCAAGAATATAATTATTCAAATCTGTaaa
tttcggaaaaaaatgAGAACCGCTGAGctccagtcaaaatttactGTTTA
ATatatagttgacgctctctaattcgacgttctactattcgataggctcc
cttattcgatgagaatccaattccccttgaagatcgaattagagagtgcc
AACTGTGTGTTCCAAATGATTCTTTCAGGTCACTACATGCTTGCTGAATC
ATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTAAAGTGT
TCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATAGCATGCAT
GGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTATTCAGG
TACTGTTGAAATTTAGCTACACTGAAACGCCAGTCGGGCTAGACCgatat
cacgcgggaaaagtgaacGTAGGAGTTAGGTgtgcgtaggaagaaatttt
gtcggcggggCAGATTCTAGCCACATACTAAATTTGTAGGTCTTCGGCCA
CTGGAAAACCGTAAGTTAAAGTTTTGAAGGTCTTCGGCCGCTAGCGTAGG
TCTTCGTCCGTTGACGGAAAAAAATCTGCGTCGGCGGGAAGGAGTGAAAG
TTAATTAGCACCCTCTCACCAACTTccgctcgttctcctacgcagcttcT
ATTTCAACAATCACCCAGCCGCACGCGCTCGTGTTTTTGCTCTCTGAATG
aataattaacagactagtttacTATTTTGGCCATAACTCACGGATGGGGT
TAGTACTCTTGATGACAGATGAGGATAACCCCTAGATTTGAAATAAATAA
GCTCAGCCAGATATCAAtttatattttcgaaaaaattagaCCCTACTAGA
AAAAAAGAACCTGAAAGATAATATTGGTATGTGATAAATTTAGTagattt
tgattaaattttgcgacAAACTCAGACACTGAAAAGAGGGATCCTAACAA
AAGGGGCATATCCCATACCCATCTTCGCCTTAGTGAATCCACAACTCGGC
CAAATCCTCAGAACTAAATTATTATTAATGGGAttttccagaaagaaatt
gaatatgggggtggaggatataacccTTATTGGAGATTTACCCACGGata
ttgtgacttttgacccccggacagcaggtctagccccctggacaagcatc
agttgaccccatgAACATTCAAAAGTTTCCCTCAAATTGAGCAAAATTag
ccccaaacagagcaagtttaccccccccccNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNccccaaacagagcaagtttccccccccccc
ggacaaggcaaattttgtagatttttcactacccccgggcACTATATccc
tatatcctccaccccccccatgtaccgacattttctggaagaacccAATA
ACATATTTTAAAATTAAGAAATGGGATTCTTCAATGGTCTATCATATTGG
AGTCttgacatcaattttttaaacatcCATTCGTTTtaggaaaagaaaat
aaagtttgGGAAATGATAGGTCCACAAGGTCCAGGATGGAAAGTAGCTGA
AGTAGACATCCCTGAAAAACCTGATAATTACAATGAAAGGAATTCTTATA
TCTTTCTTGACTACAAGGTATATTCTTTTAAGGTCTTTATCTAATTTTAT
GTCCTTTATGTCctattttcgcgatttttttaattttgattgcGTACAAA
AGTCGCTGAGCACAAAGCAGACAGAGATTAAGTACACAAACATTTTTGCG
TTCTTGGTAAGACCCGACCAATTGAACCGCCGACCTTTTAAATcatatgt
tgaacggtgaaaaagaatgctgCTATTATAtacatgtttcggactcggtc
cgCTCTCAAGGGAATGAAGATAGATATCCTATAGATTACAGTCACTATAA
TTACCTTCCATTAGTTCCATTTATACTTAgacggaaaaatcgtctgagac
gAGAAGTTTAtaaaatgtgatctgtggaggatatcctatttattgaaaca
agtacactcctccataatgctcattttctaaattactcgtctcagacaaa
ttaatcgtTTCAGTATAAATAGAACCATTCTCTTTAAAGATACGTTTCGA
AGCAGAGCGTGGACACAGTTTTCAAGGAGACATTGCATTGGATGATATTT
TTATTGTTAACTCGCTATGTTCCAAGAAAAAAACACTTGTTCCGATACTG
AGCACCACCCCAACGACCACCActactacaacaacgaccaccactACTAC
AGCAACGACCACCCCAACTACAGCAACGACCACcccaactacaacaacga
ccactccaactacaacaacgaccactccaacGACTACAACGACCACCCCA
ACAACTACCACGTCCACCCCAACCACTACTACCGGTATGTCTGATACTCT
TTAGAAGGCTAATACTTAAGAAATGAAATCTAATCTAATCTAAAAGGGAA
GGCTAATCGCCAGAAGTGGATGAAATTTCGCTATAATGTTGTTG Coding sequence (CDS) from alignment at scaffold_286:646645..651338+ >TCONS_00057198 ID=TCONS_00057198|Name=TCONS_00057198|organism=Clytia hemisphaerica|type=CDS|length=4740bp|location=Sequence derived from alignment at scaffold_286:646645..651338+ (Clytia hemisphaerica)
CCACAAGATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCACA
CCAATGTGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCCTG
AAACAAAGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAAAA
GATTGTTACATTAAACCATGCGCATTGGaacCGGATGATTGTTTATTCGA
CGGGCAAGGAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATACA
TGTGGAAAAGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTGAT
TCTGATCATACAACACAGAACACTACTAAAAACGGTCACTACATGCTTGC
TGAATCATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTA
AAGTGTTCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATAGC
ATGCATGGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTA
TTCAGgaaaagaaaataaagtttgGGAAATGATAGGTCCACAAGGTCCAG
GATGGAAAGTAGCTGAAGTAGACATCCCTGAAAAACCTGATAATTACAAT
GAAAGGAATTCTTATATCTTTCTTGACTACAAGATACGTTTCGAAGCAGA
GCGTGGACACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTATTG
TTAACTCGCTATGTTCCAAGAAAAAAACACTTGTTCCGATACTGAGCACC
ACCCCAACGACCACCActactacaacaacgaccaccactACTACAGCAAC
GACCACCCCAACTACAGCAACGACCACcccaactacaacaacgaccactc
caactacaacaacgaccactccaacGACTACAACGACCACCCCAACAACT
ACCACGTCCACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAGCC
ACAAGATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCACACC
AATGTGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCCTGAA
ACAAAGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAAAAGA
TTGTTACATTAAACCATGCGCATTGGaacCGGATGATTGTTTATTCGACG
GGCAAGGAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATACATG
TGGAAAAGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTGATTC
TGATCATACAACACAGAACACTACTAAAAACGGTCACTACATGCTTGCTG
AATCATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTAAA
GTGTTCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATAGCAT
GCATGGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTATT
CAGgaaaagaaaataaagtttgGGAAATGATAGGTCCACAAGGTCCAGGA
TGGAAAGTAGCTGAAGTAGACATCCCTGAAAAACCTGATAATTACAATGA
AAGGAATTCTTATATCTTTCTTGACTACAAGATACGTTTCGAAGCAGAGC
GTGGACACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTATTGTT
AACTCGCTATGTTCCAAGAAAAAAACACTTGTTCCGATACTGAGCACCAC
CCCAACGACCACCActactacaacaacgaccaccactACTACAGCAACGA
CCACCCCAACTACAGCAACGACCACcccaactacaacaacgaccactcca
actacaacaacgaccactccaacGACTACAACGACCACCCCAACAACTAC
CACGTCCACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAGCCAC
AAGATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCACACCAA
TGTGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCCTGAAAC
AAAGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAAAAGATT
GTTACATTAAACCATGCGCATTGGaacCGGATGATTGTTTATTCGACGGG
CAAGGAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATACATGTG
GAAAAGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTGATTCTG
ATCATACAACACAGAACACTACTAAAAACGGTCACTACATGCTTGCTGAA
TCATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTAAAGT
GTTCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATAGCATGC
ATGGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTATTCA
GgaaaagaaaataaagtttgGGAAATGATAGGTCCACAAGGTCCAGGATG
GAAAGTAGCTGAAGTAGACATCCCTGAAAAACCTGATAATTACAATGAAA
GGAATTCTTATATCTTTCTTGACTACAAGATACGTTTCGAAGCAGAGCGT
GGACACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTATTGTTAA
CTCGCTATGTTCCAAGAAAAAAACACTTGTTCCGATACTGAGCACCACCC
CAACGACCACCActactacaacaacgaccaccactACTACAGCAACGACC
ACCCCAACTACAGCAACGACCACcccaactacaacaacgaccactccaac
tacaacaacgaccactccaacGACTACAACGACCACCCCAACAACTACCA
CGTCCACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAGCCACAA
GATGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCACACCAATG
TGGAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCCTGAAACAA
AGAATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAAAAGATTGT
TACATTAAACCATGCGCATTGGaacCGGATGATTGTTTATTCGACGGGCA
AGGAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATACATGTGGA
AAAGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTGATTCTGAT
CATACAACACAGAACACTACTAAAAACGGTCACTACATGCTTGCTGAATC
ATCATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTAAAGTGT
TCAAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATAGCATGCAT
GGAATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTATTCAGg
aaaagaaaataaagtttgGGAAATGATAGGTCCACAAGGTCCAGGATGGA
AAGTAGCTGAAGTAGACATCCCTGAAAAACCTGATAATTACAATGAAAGG
AATTCTTATATCTTTCTTGACTACAAGATACGTTTCGAAGCAGAGCGTGG
ACACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTATTGTTAACT
CGCTATGTTCCAAGAAAAAAACACTTGTTCCGATACTGAGCACCACCCCA
ACGACCACCActactacaacaacgaccaccactACTACAGCAACGACCAC
CCCAACTACAGCAACGACCACcccaactacaacaacgaccactccaacta
caacaacgaccactccaacGACTACAACGACCACCCCAACAACTACCACG
TCCACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAGCCACAAGA
TGGTCACTGGGGACGATGGTCTTCCTGGGGTGAATGTTCACACCAATGTG
GAGAGGGAAAAGAAAAGCGAACACGAAAATGTGATGATCCTGAAACAAAG
AATGGAGGAAAGAATTGTCCGGGTGAATCTGTTCAATCAAAAGATTGTTA
CATTAAACCATGCGCATTGGaacCGGATGATTGTTTATTCGACGGGCAAG
GAATGTGTTTTTGGCAAGACAAATCATATGATAAATCATACATGTGGAAA
AGAGTTACCGGTGGAACACCGACTCCTTCCACTGGCCCTGATTCTGATCA
TACAACACAGAACACTACTAAAAACGGTCACTACATGCTTGCTGAATCAT
CATCACCCGCCAGACTTGGAATGAAAGCTTCTCTGGTCAGTAAAGTGTTC
AAATCAACAACATCGGTCAAATGTTTAACATTCTTCTATAGCATGCATGG
AATGGGGATTGGAGTTCTCCGTGTTTTTGTCAAGTTTCCGTATTCAGgaa
aagaaaataaagtttgGGAAATGATAGGTCCACAAGGTCCAGGATGGAAA
GTAGCTGAAGTAGACATCCCTGAAAAACCTGATAATTACAATGAAAGGAA
TTCTTATATCTTTCTTGACTACAAGATACGTTTCGAAGCAGAGCGTGGAC
ACAGTTTTCAAGGAGACATTGCATTGGATGATATTTTTATTGTTAACTCG
CTATGTTCCAAGAAAAAAACACTTGTTCCGATACTGAGCACCACCCCAAC
GACCACCActactacaacaacgaccaccactACTACAGCAACGACCACCC
CAACTACAGCAACGACCACcccaactacaacaacgaccactccaactaca
acaacgaccactccaacGACTACAACGACCACCCCAACAACTACCACGTC
CACCCCAACCACTACTACCGGTATGTCTGATACTCTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057198-exon-scaffold_286-1491911889:646645..646824 | TCONS_00057198-exon-scaffold_286-1491911889:646645..646824 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1510915933:646645..646824 | TCONS_00057198-exon-scaffold_286-1510915933:646645..646824 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1575043694:646645..646824 | TCONS_00057198-exon-scaffold_286-1575043694:646645..646824 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1491911889:647915..648070 | TCONS_00057198-exon-scaffold_286-1491911889:647915..648070 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1510915933:647915..648070 | TCONS_00057198-exon-scaffold_286-1510915933:647915..648070 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1575043694:647915..648070 | TCONS_00057198-exon-scaffold_286-1575043694:647915..648070 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1491911889:648473..648643 | TCONS_00057198-exon-scaffold_286-1491911889:648473..648643 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1510915933:648473..648643 | TCONS_00057198-exon-scaffold_286-1510915933:648473..648643 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1575043694:648473..648643 | TCONS_00057198-exon-scaffold_286-1575043694:648473..648643 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1491911889:650334..650461 | TCONS_00057198-exon-scaffold_286-1491911889:650334..650461 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1510915933:650334..650461 | TCONS_00057198-exon-scaffold_286-1510915933:650334..650461 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1575043694:650334..650461 | TCONS_00057198-exon-scaffold_286-1575043694:650334..650461 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1491911889:650934..651338 | TCONS_00057198-exon-scaffold_286-1491911889:650934..651338 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1510915933:650934..651338 | TCONS_00057198-exon-scaffold_286-1510915933:650934..651338 | Clytia hemisphaerica | exon |
| TCONS_00057198-exon-scaffold_286-1575043694:650934..651338 | TCONS_00057198-exon-scaffold_286-1575043694:650934..651338 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_286 | supercontig | scaffold_286:646645..651338 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
Blast
BLAST of TCONS_00057198 vs. Swiss-Prot (Human)
Match: MDGA1 (MAM domain-containing glycosylphosphatidylinositol anchor protein 1 OS=Homo sapiens GN=MDGA1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.670e-17 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 3
Query: 327 TKNGHYMLAESSSPARLGMKASLVSKVFKSTTSVKCLTFFYSMHGMGIGVLRVFVKFPYSGK-ENKVWEMIGPQGPGWKVAEVDI-PEKPDNYNERNSYIFLDYKIRFEAERGHSFQGDIALDDIFIVNSLCSKKKT 731
T G+YM E+S P LG +A LVS ++ ++ C++FFY M+G IG L + V+ G + W + G +G W+ A V I P P ++I FE RG + GDIA+DD+ + C +K+T
Sbjct: 798 TPEGYYMFIETSRPRELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNKGALDTHAWSLSGNKGNVWQQAHVPISPSGP-------------FQIIFEGVRGPGYLGDIAIDDVTLKKGECPRKQT 921
The following BLAST results are available for this feature:
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