TCONS_00057512 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057512
Unique NameTCONS_00057512
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1668

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057512 ID=TCONS_00057512|Name=TCONS_00057512|organism=Clytia hemisphaerica|type=transcript|length=1668bp
acaataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGT
ACGGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACA
ATCAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAG
ATTTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTG
ACAAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCT
TCACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTATGAAAAACAGt
tGAAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGATCGCCAAGGGA
GAAGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATCAAAACAAAACG
CGAAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGGCCCTTCAT
CcaacaagaaaaacaaagaagaggAAATCAAAACCATGAATATCAATACG
AACGCCCAGGAGAAGAAGAATCTTCCAAGTTTTTGGATTCCCTCCCTCAC
ACCACAAGCCAGCCAATCAAGAGTAGAGAAGCCAGACAGTAAAGTGTACT
GTCCCATGAGTGGCAAACCTATCAAACTAAAAGACTTAATTTCCGTAAAA
TTCACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAATCGATTGTCGC
TAGGAAACAGCGTTATATTTGTCCGGTTACTAGGGACGTTTTAAGTAACA
CTGTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAGTTTCGATGGAA
TGCGTTGAGAAGTTTATAAAGAAAGACTGGGTTTGTCCGATCACTGGACA
CAAATTGAAAGAAAAGGATGTCATCGAGCTAAAACGTGGTGGAACAGGTT
ACTCGTCCGTTGGTAAAGACTCTCTTGAAGGAAAAGCGTATGGGCCAACC
ATGATGGTCAGCTAGAATCATTTATATTCACCTTGAAAGAATGTTGCATG
CGTTGTTATACGTGCGTTGTCCGGAAGAGGAGGTGCTTCGATGGATTAAA
TATTAACTAACTTCCACACGTTTTACTTACGTAATATCAGTTGCGTAGCC
AACAGGGTGCAAGATTTGTATAAGAGAGAGAGAGTTGGTTGAGCCATTGA
GTTCAGAGTCCCGAATGGGATAGAGAGGAAACTCTTGGCTTGGAAATGAA
GCTACTTTTTCCCATCCAAACTGCGTAGTTTTCATACAAACGtcgtattg
aaaataaaattcattgcTTTGGTTTTGAAAAATGTACCACGTGACAATGT
GTGGTTTCTCAATACGGcgttttttcttgcttgagaaaggttgaagattc
ctctctagctctcttgggctttaaactcaatgggctGAACCCTGTTATGA
CATCTCTTTACTGGCTTATGAAAACATTTGCACTGTTAAAGGACTGAAAA
CTTTATAACAGCTGAGACTGACCTGAATTTTAGCGACCCTTTTACCAGAT
AAAGAATTTTCTTCATTATTGTGAGAATAAATACCTAAAAGTTTGCAAAT
AATACTCTGAAGCCACTTTATGGTAGTGATTCGAAACCACAGATTTTAAT
ACTCGCTCACACACACTTTGCgttaaaattcttttcttttcgaacataat
ttaaaatttcgTATAAAT
Run BLAST on NCBI

protein sequence of TCONS_00057512-protein

>TCONS_00057512-protein ID=TCONS_00057512-protein|Name=TCONS_00057512-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
NKKKQQHNMTRHGKNCTAGAVYTYHEKQKDTKQSGWGSQQARYSKDSIKD
FDCCSLTLQPCKDPVVTKEGHLYEREVILEYILHQKQANNKKMKAYEKQL
KKDEKTQTEEEEIAKGEVVTKFLTTEKAIKTKRENPFKSEKSEDQAGPSS
NKKNKEEEIKTMNINTNAQEKKNLPSFWIPSLTPQASQSRVEKPDSKVYC
PMSGKPIKLKDLISVKFTLAPADESDKQKSIVARKQRYICPVTRDVLSNT
VRSAVLKPSGNVVSMECVEKFIKKDWVCPITGHKLKEKDVIELKRGGTGY
SSVGKDSLEGKAYGPTMMVS
Run BLAST on NCBI

transcript from alignment at scaffold_291:116409..121056+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057512 ID=TCONS_00057512|Name=TCONS_00057512|organism=Clytia hemisphaerica|type=transcript|length=4648bp|location=Sequence derived from alignment at scaffold_291:116409..121056+ (Clytia hemisphaerica)
acaataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGT ACGGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACA ATCAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAG ATTTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTG ACAAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCT TCACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTATGAAAAACAGG TACTTTAATAGTTTTCTCTTGGGTCAGTCCCCCAGAAATTCTAGACGACC CGGTTGTCAAATCCCacccctgaaaatgaaaaaaaatcgttttcacACGC CTTTTGTGTTTTCCCTCCCAGAAATGTTGAAATCCCCCCcccttttcggc ccaggtccAGGGGACcgttcggggacccccgttcggtgtccgggaggccc cgaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctacgggaccttgaaaa ccttgaaaatgaaccacccaaccttgaaaaccttgaaaactatcaatttt ctgggaaaaaccttgaaaaccttgaaaaatcgctaaaaatcttgaaaagc aCTTCTTTATCATACAATCTTTTCAACAGGGCAGTGGTTGAGTGTAGGTT TTTCTCTAGAATTGCAAATTGAGGTATCTTGCCGGACATCCCTCTACCAT GATTTTTCCGATTTAGAGtaatctgaaaaattaagaacgcatttttaaga acatttcagctGAAAAATGCTAAGGAAATAAGCACATACAGGCTCAGCAA AGTTTTAactgttttaataaaaaaaaacgtgtacttcatTAAATCATGTA AAAATATCTCTATAAAATTGCCTTTTGATTGATGGGTTGAAGCCATTGCA TAAGGGTGACCGGACTGAATTTTCTATagaatttcctaaggggggtctga attttcaaatgtatttTCTAAGGGGTTACCACCTAGGGATTCTCCCAATG TATTACAAGGTTTTCAGTACAACTAACCAAAGACAAAATGGAATTTTTAA TACACTAATTTTGCACTGATTTTTTGCCTGACCACTTTTTCTGCCCACCC TGTATGGCTCATATGGCTAAAGGATATAAAAGTTATTTCTTATATCTATT AGCCTTTGAATATTTGTTTTTCACGATGTCTGCTAGTTGTATCTTACAAA CCTATCTGAGAGCCATGTCAActgagtatcaaaaaaccttgaaaaatgtc aacattttttgccaaaaagactttaaaaaccacttaaaaatgatcaaaac aaccttgaaaaccttgaaaatcccgAAAGAAAATCTATACTTCTTTAAAC ATTGATCCTGAGGAGGGAAATATAATTAGAAAATACCTCGTTGGATGAAT AattggaaaatgaagatgaaaaatgagcATGAAAGAAAATCTTTTCCGAA GACCCTTTTTACTTTGGCTAAAAATAAACCATCTGAGCCAAACAAATTCt ttcaaagatgtttttcttcATTCAAATAAGGTTATCAAAGttgaaataat caaataaacgaaaatgtaccgggtgacccacaaATAATTCAGAATTTTGT TGGCTAGATCAGGCAGAAATTAACTTTTTATAACGCAATGGTGAaatgtt taaaggttttgtttttaaataagagtgatatcgtttgcttactcatcaat tttaatcacAACTGTTTCACATTGGAttaacacggatgtggagcaagatt ggtcagatataggaaaagaaaaacatttttttgcatatatcagcataata taactaaagcaagacactgtcctggtataaaatatgtgtcttatatgaaa cgggaacacttatataaaaacaaaacctttaaacacTGGTCACTTTAAAA ATTAGACTGTAGTGTAGGTCATATAATTTTTCAGTTGATTCcttttttct aattcagttGAAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGATCG CCAAGGGAGAAGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATCAAA ACAAAACGCGAAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGG CCCTTCATCcaacaagaaaaacaaagaagaggAAATCAAAACCATGAATA TCAATACGAGTGAGTTTCCTTTTGGTTCGAAAGTTGATTCAAACCCTGCA ATtatacgcttttttataagaatagtgtaatTTGGCTAagggtgagcatt atttttattctattgttctaaacaataggcctatttttctaactctgaaa tctcacccttttattcttatagaagttattcttatatgTAGGTATTTGGT AGTGGGGTTAATTAGTATAAGAAAACTGCAAATGGTTTTTTGACTCAATT TTGCACACTAACATTATATCAAATGTAATAACTTTTGGCCGAGAGAGGCA AAATTTATAGGGCCTTCATTACCCTTGGAAACCGAAATAACGGTTGTTCG AGTTTCCTTAGTAACGGGAAACTTTTtcgttaaaaaatgaaaatttgttc gTGCCAATCGAAAGAAcacaaatttttgataaattagttaccttatcggc cctttttacgccggccctttttGGCGTTATACTTGGGCTCGTgtcgtaat aagggccggcgtaaaaagggccgataaggtatattaaACATGATCAAAAG TTTTGACTGTTTGAATTTTGTCATTGATGTCATTATTTAGCCCACTGCAA TTTAAGGCATATTTCAAAATGCCatagcttttctcaaaatttgcaaaagt gtTCTCTGAtgaatttaaaaacttttggtCGAGAGGGGTAAAGTTTTGAA GTCCTAAGTTACACATGGCAACGGTTTTGGCATTTGTAGTTTTCTAACAA TCCAACATCGAGGAGGGTTGTCAAGCAACTTGGAAATCCTTTtgagaact tttgcaaaattaTGATACCtgtaatatttccttttggTTCGAGGGTCGAT TCATATTCATTAGAGAAATTATAAGTGAAAGTTCTCGTGCCACAAGTCTA GCCTCTTCgtcagaattttcaaagaacCTTTTTATCCTTGATTAACATTA CTTCGAGTgagtagattttattttttagttccAGAGACTACGTAGTGGGC AGAGGGATCAAATAAAGTTGGATATCCAGGTTCGATgattcaaaaaatca atatcctcaacagtggaagtaaaatctttttctggaaaagccatTATAAA TCATTATAAGATTTGTTTATTTATCTTTTAGACGCCCAGGAGAAGAAGAA TCTTCCAAGTTTTTGGATTCCCTCCCTCACACCACAAGCCAGCCAATCAA GAGTAGAGAAGCCAGACAGTAAAGTGTACTGTCCCATGAGTGGCAAACCT ATCAAACTAAAAGACTTAATTTCCGTAAAATTCACTCTGGCGCCTGCTGA CGAATCAGATAAGCAGAAATCGATTGTCGCTAGGAAACAGCGTTATATTT GTCCGGTTACTAGGGACGTTTTAAGTAACACTGTCCGATCGGCGGTGCTG AAACCGTCCGGTAATGTAGTTTCGATGGAATGCGTTGAGAAGTTTATAAA GAAAGACTGGGTTTGTCCGATCACTGGACACAAATTGAAAGAAAAGGATG TCATCGAGCTAAAACGTGGTGGAACAGGTTACTCGTCCGTTGGTAAAGAC TCTCTTGAAGGAAAAGCGTATGGGCCAACCATGATGGTCAGCTAGAATCA TTTATATTCACCTTGAAAGAATGTTGCATGCGTTGTTATACGTGCGTTGT CCGGAAGAGGAGGTGCTTCGATGGATTAAATATTAACTAACTTCCACACG TTTTACTTACGTAATATCAGTTGCGTAGCCAACAGGGTGCAAGATTTGTA TAAGAGAGAGAGAGTTGGTTGAGCCATTGAGTTCAGAGTCCCGAATGGGA TAGAGAGGAAACTCTTGGCTTGGAAATGAAGCTACTTTTTCCCATCCAAA CTGCGTAGTTTTCATACAAACGtcgtattgaaaataaaattcattgcTTT GGTTTTGAAAAATGTACCACGTGACAATGTGTGGTTTCTCAATACGGcgt tttttcttgcttgagaaaggttgaagattcctctctagctctcttgggct ttaaactcaatgggctGAACCCTGTTATGACATCTCTTTACTGGCTTATG AAAACATTTGCACTGTTAAAGGACTGAAAACTTTATAACAGCTGAGACTG ACCTGAATTTTAGCGACCCTTTTACCAGATAAAGAATTTTCTTCATTATT GTGAGAATAAATACCTAAAAGTTTGCAAATAATACTCTGAAGCCACTTTA TGGTAGTGATTCGAAACCACAGATTTTAATACTCGCTCACACACACTTTG CgttaaaattcttttcttttcgaacataatttaaaatttcgTATAAAT

Coding sequence (CDS) from alignment at scaffold_291:116409..121056+

>TCONS_00057512 ID=TCONS_00057512|Name=TCONS_00057512|organism=Clytia hemisphaerica|type=CDS|length=2889bp|location=Sequence derived from alignment at scaffold_291:116409..121056+ (Clytia hemisphaerica)
aataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGTAC
GGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACAAT
CAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAGAT
TTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTGAC
AAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCTTC
ACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTATGAAAAACAGttG
AAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGATCGCCAAGGGAGA
AGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATCAAAACAAAACGCG
AAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGGCCCTTCATCc
aacaagaaaaacaaagaagaggAAATCAAAACCATGAATATCAATACGAA
CGCCCAGGAGAAGAAGAATCTTCCAAGTTTTTGGATTCCCTCCCTCACAC
CACAAGCCAGCCAATCAAGAGTAGAGAAGCCAGACAGTAAAGTGTACTGT
CCCATGAGTGGCAAACCTATCAAACTAAAAGACTTAATTTCCGTAAAATT
CACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAATCGATTGTCGCTA
GGAAACAGCGTTATATTTGTCCGGTTACTAGGGACGTTTTAAGTAACACT
GTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAGTTTCGATGGAATG
CGTTGAGAAGTTTATAAAGAAAGACTGGGTTTGTCCGATCACTGGACACA
AATTGAAAGAAAAGGATGTCATCGAGCTAAAACGTGGTGGAACAGGTTAC
TCGTCCGTTGGTAAAGACTCTCTTGAAGGAAAAGCGTATGGGCCAACCAT
GATGGTCAGCTAGaataagaaaaaacaacaacataatATGACACGCCATG
GTAAAAATTGTACGGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAA
GACACCAAACAATCAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGA
CTCCATCAAAGATTTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGG
ACCCAGTAGTGACAAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTG
GAGTACATTCTTCACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTA
TGAAAAACAGttGAAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGA
TCGCCAAGGGAGAAGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATC
AAAACAAAACGCGAAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGC
TGGCCCTTCATCcaacaagaaaaacaaagaagaggAAATCAAAACCATGA
ATATCAATACGAACGCCCAGGAGAAGAAGAATCTTCCAAGTTTTTGGATT
CCCTCCCTCACACCACAAGCCAGCCAATCAAGAGTAGAGAAGCCAGACAG
TAAAGTGTACTGTCCCATGAGTGGCAAACCTATCAAACTAAAAGACTTAA
TTTCCGTAAAATTCACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAA
TCGATTGTCGCTAGGAAACAGCGTTATATTTGTCCGGTTACTAGGGACGT
TTTAAGTAACACTGTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAG
TTTCGATGGAATGCGTTGAGAAGTTTATAAAGAAAGACTGGGTTTGTCCG
ATCACTGGACACAAATTGAAAGAAAAGGATGTCATCGAGCTAAAACGTGG
TGGAACAGGTTACTCGTCCGTTGGTAAAGACTCTCTTGAAGGAAAAGCGT
ATGGGCCAACCATGATGGTCAGCTAGaataagaaaaaacaacaacataat
ATGACACGCCATGGTAAAAATTGTACGGCAGGTGCTGTGTACACATATCA
TGAAAAGCAGAAAGACACCAAACAATCAGGATGGGGTTCGCAACAAGCTC
GATACAGTAAAGACTCCATCAAAGATTTTGACTGCTGCTCATTGACTCTT
CAGCCCTGCAAGGACCCAGTAGTGACAAAAGAAGGCCACCTGTATGAGAG
AGAAGTCATACTGGAGTACATTCTTCACCAAAAACAAGCCAAcaacaaga
aaatgaaagcCTATGAAAAACAGttGAAAAAAGACGAGAAAACACAAACA
GAAGAGGAAGAGATCGCCAAGGGAGAAGTTGTCACCAAATTTCTCACAAC
AGAAAAAGCCATCAAAACAAAACGCGAAAATCCATTCAAAAGTGAGAAAA
GTGAAGACCAAGCTGGCCCTTCATCcaacaagaaaaacaaagaagaggAA
ATCAAAACCATGAATATCAATACGAACGCCCAGGAGAAGAAGAATCTTCC
AAGTTTTTGGATTCCCTCCCTCACACCACAAGCCAGCCAATCAAGAGTAG
AGAAGCCAGACAGTAAAGTGTACTGTCCCATGAGTGGCAAACCTATCAAA
CTAAAAGACTTAATTTCCGTAAAATTCACTCTGGCGCCTGCTGACGAATC
AGATAAGCAGAAATCGATTGTCGCTAGGAAACAGCGTTATATTTGTCCGG
TTACTAGGGACGTTTTAAGTAACACTGTCCGATCGGCGGTGCTGAAACCG
TCCGGTAATGTAGTTTCGATGGAATGCGTTGAGAAGTTTATAAAGAAAGA
CTGGGTTTGTCCGATCACTGGACACAAATTGAAAGAAAAGGATGTCATCG
AGCTAAAACGTGGTGGAACAGGTTACTCGTCCGTTGGTAAAGACTCTCTT
GAAGGAAAAGCGTATGGGCCAACCATGATGGTCAGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036252XLOC_036252Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057512-proteinTCONS_00057512-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057512-exon-scaffold_291-1491911889:116409..116707TCONS_00057512-exon-scaffold_291-1491911889:116409..116707Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1510915933:116409..116707TCONS_00057512-exon-scaffold_291-1510915933:116409..116707Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1575043694:116409..116707TCONS_00057512-exon-scaffold_291-1575043694:116409..116707Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1491911889:118566..118767TCONS_00057512-exon-scaffold_291-1491911889:118566..118767Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1510915933:118566..118767TCONS_00057512-exon-scaffold_291-1510915933:118566..118767Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1575043694:118566..118767TCONS_00057512-exon-scaffold_291-1575043694:118566..118767Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1491911889:119890..121056TCONS_00057512-exon-scaffold_291-1491911889:119890..121056Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1510915933:119890..121056TCONS_00057512-exon-scaffold_291-1510915933:119890..121056Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1575043694:119890..121056TCONS_00057512-exon-scaffold_291-1575043694:119890..121056Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_291supercontigscaffold_291:116409..121056 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (11.0892 tpm) - - (55.901 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.6169 29.7958 26.783 33.5355 43.4168 37.1848 42.2101 40.7195 25.4908 24.4606 20.3985 15.8222 16.506 16.2516 18.3831 17.7539 30.174 27.4355 11.0892 13.0377 18.265 19.0505 55.901 48.4724 26.4469 26.3061 18.9515 18.0152 33.7988 39.3002
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD
IPR031790Znf-NOSIP
IPR027799Rtf2_RING-finger
IPR016818Nitric_oxide_synth-interacting
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO:0050999regulation of nitric-oxide synthase activity
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0050999 regulation of nitric-oxide synthase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
2004006008001000120014001600Expect = 5.91e-99 / Id = 52.98SequenceNOSIP
Match NameE-valueIdentityDescription
NOSIP5.914e-9952.98Nitric oxide synthase-interacting protein OS=Homo ... [more]
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