TCONS_00057512 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057512
Unique NameTCONS_00057512
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1668

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057512 ID=TCONS_00057512|Name=TCONS_00057512|organism=Clytia hemisphaerica|type=transcript|length=1668bp
acaataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGT
ACGGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACA
ATCAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAG
ATTTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTG
ACAAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCT
TCACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTATGAAAAACAGt
tGAAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGATCGCCAAGGGA
GAAGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATCAAAACAAAACG
CGAAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGGCCCTTCAT
CcaacaagaaaaacaaagaagaggAAATCAAAACCATGAATATCAATACG
AACGCCCAGGAGAAGAAGAATCTTCCAAGTTTTTGGATTCCCTCCCTCAC
ACCACAAGCCAGCCAATCAAGAGTAGAGAAGCCAGACAGTAAAGTGTACT
GTCCCATGAGTGGCAAACCTATCAAACTAAAAGACTTAATTTCCGTAAAA
TTCACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAATCGATTGTCGC
TAGGAAACAGCGTTATATTTGTCCGGTTACTAGGGACGTTTTAAGTAACA
CTGTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAGTTTCGATGGAA
TGCGTTGAGAAGTTTATAAAGAAAGACTGGGTTTGTCCGATCACTGGACA
CAAATTGAAAGAAAAGGATGTCATCGAGCTAAAACGTGGTGGAACAGGTT
ACTCGTCCGTTGGTAAAGACTCTCTTGAAGGAAAAGCGTATGGGCCAACC
ATGATGGTCAGCTAGAATCATTTATATTCACCTTGAAAGAATGTTGCATG
CGTTGTTATACGTGCGTTGTCCGGAAGAGGAGGTGCTTCGATGGATTAAA
TATTAACTAACTTCCACACGTTTTACTTACGTAATATCAGTTGCGTAGCC
AACAGGGTGCAAGATTTGTATAAGAGAGAGAGAGTTGGTTGAGCCATTGA
GTTCAGAGTCCCGAATGGGATAGAGAGGAAACTCTTGGCTTGGAAATGAA
GCTACTTTTTCCCATCCAAACTGCGTAGTTTTCATACAAACGtcgtattg
aaaataaaattcattgcTTTGGTTTTGAAAAATGTACCACGTGACAATGT
GTGGTTTCTCAATACGGcgttttttcttgcttgagaaaggttgaagattc
ctctctagctctcttgggctttaaactcaatgggctGAACCCTGTTATGA
CATCTCTTTACTGGCTTATGAAAACATTTGCACTGTTAAAGGACTGAAAA
CTTTATAACAGCTGAGACTGACCTGAATTTTAGCGACCCTTTTACCAGAT
AAAGAATTTTCTTCATTATTGTGAGAATAAATACCTAAAAGTTTGCAAAT
AATACTCTGAAGCCACTTTATGGTAGTGATTCGAAACCACAGATTTTAAT
ACTCGCTCACACACACTTTGCgttaaaattcttttcttttcgaacataat
ttaaaatttcgTATAAAT
Run BLAST on NCBI

protein sequence of TCONS_00057512-protein

>TCONS_00057512-protein ID=TCONS_00057512-protein|Name=TCONS_00057512-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
NKKKQQHNMTRHGKNCTAGAVYTYHEKQKDTKQSGWGSQQARYSKDSIKD
FDCCSLTLQPCKDPVVTKEGHLYEREVILEYILHQKQANNKKMKAYEKQL
KKDEKTQTEEEEIAKGEVVTKFLTTEKAIKTKRENPFKSEKSEDQAGPSS
NKKNKEEEIKTMNINTNAQEKKNLPSFWIPSLTPQASQSRVEKPDSKVYC
PMSGKPIKLKDLISVKFTLAPADESDKQKSIVARKQRYICPVTRDVLSNT
VRSAVLKPSGNVVSMECVEKFIKKDWVCPITGHKLKEKDVIELKRGGTGY
SSVGKDSLEGKAYGPTMMVS
Run BLAST on NCBI

transcript from alignment at scaffold_291:116409..121056+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057512 ID=TCONS_00057512|Name=TCONS_00057512|organism=Clytia hemisphaerica|type=transcript|length=4648bp|location=Sequence derived from alignment at scaffold_291:116409..121056+ (Clytia hemisphaerica)
acaataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGT
ACGGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACA
ATCAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAG
ATTTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTG
ACAAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCT
TCACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTATGAAAAACAGG
TACTTTAATAGTTTTCTCTTGGGTCAGTCCCCCAGAAATTCTAGACGACC
CGGTTGTCAAATCCCacccctgaaaatgaaaaaaaatcgttttcacACGC
CTTTTGTGTTTTCCCTCCCAGAAATGTTGAAATCCCCCCcccttttcggc
ccaggtccAGGGGACcgttcggggacccccgttcggtgtccgggaggccc
cgaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctacgggaccttgaaaa
ccttgaaaatgaaccacccaaccttgaaaaccttgaaaactatcaatttt
ctgggaaaaaccttgaaaaccttgaaaaatcgctaaaaatcttgaaaagc
aCTTCTTTATCATACAATCTTTTCAACAGGGCAGTGGTTGAGTGTAGGTT
TTTCTCTAGAATTGCAAATTGAGGTATCTTGCCGGACATCCCTCTACCAT
GATTTTTCCGATTTAGAGtaatctgaaaaattaagaacgcatttttaaga
acatttcagctGAAAAATGCTAAGGAAATAAGCACATACAGGCTCAGCAA
AGTTTTAactgttttaataaaaaaaaacgtgtacttcatTAAATCATGTA
AAAATATCTCTATAAAATTGCCTTTTGATTGATGGGTTGAAGCCATTGCA
TAAGGGTGACCGGACTGAATTTTCTATagaatttcctaaggggggtctga
attttcaaatgtatttTCTAAGGGGTTACCACCTAGGGATTCTCCCAATG
TATTACAAGGTTTTCAGTACAACTAACCAAAGACAAAATGGAATTTTTAA
TACACTAATTTTGCACTGATTTTTTGCCTGACCACTTTTTCTGCCCACCC
TGTATGGCTCATATGGCTAAAGGATATAAAAGTTATTTCTTATATCTATT
AGCCTTTGAATATTTGTTTTTCACGATGTCTGCTAGTTGTATCTTACAAA
CCTATCTGAGAGCCATGTCAActgagtatcaaaaaaccttgaaaaatgtc
aacattttttgccaaaaagactttaaaaaccacttaaaaatgatcaaaac
aaccttgaaaaccttgaaaatcccgAAAGAAAATCTATACTTCTTTAAAC
ATTGATCCTGAGGAGGGAAATATAATTAGAAAATACCTCGTTGGATGAAT
AattggaaaatgaagatgaaaaatgagcATGAAAGAAAATCTTTTCCGAA
GACCCTTTTTACTTTGGCTAAAAATAAACCATCTGAGCCAAACAAATTCt
ttcaaagatgtttttcttcATTCAAATAAGGTTATCAAAGttgaaataat
caaataaacgaaaatgtaccgggtgacccacaaATAATTCAGAATTTTGT
TGGCTAGATCAGGCAGAAATTAACTTTTTATAACGCAATGGTGAaatgtt
taaaggttttgtttttaaataagagtgatatcgtttgcttactcatcaat
tttaatcacAACTGTTTCACATTGGAttaacacggatgtggagcaagatt
ggtcagatataggaaaagaaaaacatttttttgcatatatcagcataata
taactaaagcaagacactgtcctggtataaaatatgtgtcttatatgaaa
cgggaacacttatataaaaacaaaacctttaaacacTGGTCACTTTAAAA
ATTAGACTGTAGTGTAGGTCATATAATTTTTCAGTTGATTCcttttttct
aattcagttGAAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGATCG
CCAAGGGAGAAGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATCAAA
ACAAAACGCGAAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGG
CCCTTCATCcaacaagaaaaacaaagaagaggAAATCAAAACCATGAATA
TCAATACGAGTGAGTTTCCTTTTGGTTCGAAAGTTGATTCAAACCCTGCA
ATtatacgcttttttataagaatagtgtaatTTGGCTAagggtgagcatt
atttttattctattgttctaaacaataggcctatttttctaactctgaaa
tctcacccttttattcttatagaagttattcttatatgTAGGTATTTGGT
AGTGGGGTTAATTAGTATAAGAAAACTGCAAATGGTTTTTTGACTCAATT
TTGCACACTAACATTATATCAAATGTAATAACTTTTGGCCGAGAGAGGCA
AAATTTATAGGGCCTTCATTACCCTTGGAAACCGAAATAACGGTTGTTCG
AGTTTCCTTAGTAACGGGAAACTTTTtcgttaaaaaatgaaaatttgttc
gTGCCAATCGAAAGAAcacaaatttttgataaattagttaccttatcggc
cctttttacgccggccctttttGGCGTTATACTTGGGCTCGTgtcgtaat
aagggccggcgtaaaaagggccgataaggtatattaaACATGATCAAAAG
TTTTGACTGTTTGAATTTTGTCATTGATGTCATTATTTAGCCCACTGCAA
TTTAAGGCATATTTCAAAATGCCatagcttttctcaaaatttgcaaaagt
gtTCTCTGAtgaatttaaaaacttttggtCGAGAGGGGTAAAGTTTTGAA
GTCCTAAGTTACACATGGCAACGGTTTTGGCATTTGTAGTTTTCTAACAA
TCCAACATCGAGGAGGGTTGTCAAGCAACTTGGAAATCCTTTtgagaact
tttgcaaaattaTGATACCtgtaatatttccttttggTTCGAGGGTCGAT
TCATATTCATTAGAGAAATTATAAGTGAAAGTTCTCGTGCCACAAGTCTA
GCCTCTTCgtcagaattttcaaagaacCTTTTTATCCTTGATTAACATTA
CTTCGAGTgagtagattttattttttagttccAGAGACTACGTAGTGGGC
AGAGGGATCAAATAAAGTTGGATATCCAGGTTCGATgattcaaaaaatca
atatcctcaacagtggaagtaaaatctttttctggaaaagccatTATAAA
TCATTATAAGATTTGTTTATTTATCTTTTAGACGCCCAGGAGAAGAAGAA
TCTTCCAAGTTTTTGGATTCCCTCCCTCACACCACAAGCCAGCCAATCAA
GAGTAGAGAAGCCAGACAGTAAAGTGTACTGTCCCATGAGTGGCAAACCT
ATCAAACTAAAAGACTTAATTTCCGTAAAATTCACTCTGGCGCCTGCTGA
CGAATCAGATAAGCAGAAATCGATTGTCGCTAGGAAACAGCGTTATATTT
GTCCGGTTACTAGGGACGTTTTAAGTAACACTGTCCGATCGGCGGTGCTG
AAACCGTCCGGTAATGTAGTTTCGATGGAATGCGTTGAGAAGTTTATAAA
GAAAGACTGGGTTTGTCCGATCACTGGACACAAATTGAAAGAAAAGGATG
TCATCGAGCTAAAACGTGGTGGAACAGGTTACTCGTCCGTTGGTAAAGAC
TCTCTTGAAGGAAAAGCGTATGGGCCAACCATGATGGTCAGCTAGAATCA
TTTATATTCACCTTGAAAGAATGTTGCATGCGTTGTTATACGTGCGTTGT
CCGGAAGAGGAGGTGCTTCGATGGATTAAATATTAACTAACTTCCACACG
TTTTACTTACGTAATATCAGTTGCGTAGCCAACAGGGTGCAAGATTTGTA
TAAGAGAGAGAGAGTTGGTTGAGCCATTGAGTTCAGAGTCCCGAATGGGA
TAGAGAGGAAACTCTTGGCTTGGAAATGAAGCTACTTTTTCCCATCCAAA
CTGCGTAGTTTTCATACAAACGtcgtattgaaaataaaattcattgcTTT
GGTTTTGAAAAATGTACCACGTGACAATGTGTGGTTTCTCAATACGGcgt
tttttcttgcttgagaaaggttgaagattcctctctagctctcttgggct
ttaaactcaatgggctGAACCCTGTTATGACATCTCTTTACTGGCTTATG
AAAACATTTGCACTGTTAAAGGACTGAAAACTTTATAACAGCTGAGACTG
ACCTGAATTTTAGCGACCCTTTTACCAGATAAAGAATTTTCTTCATTATT
GTGAGAATAAATACCTAAAAGTTTGCAAATAATACTCTGAAGCCACTTTA
TGGTAGTGATTCGAAACCACAGATTTTAATACTCGCTCACACACACTTTG
CgttaaaattcttttcttttcgaacataatttaaaatttcgTATAAAT

Coding sequence (CDS) from alignment at scaffold_291:116409..121056+

>TCONS_00057512 ID=TCONS_00057512|Name=TCONS_00057512|organism=Clytia hemisphaerica|type=CDS|length=2889bp|location=Sequence derived from alignment at scaffold_291:116409..121056+ (Clytia hemisphaerica)
aataagaaaaaacaacaacataatATGACACGCCATGGTAAAAATTGTAC
GGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAAGACACCAAACAAT
CAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGACTCCATCAAAGAT
TTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGGACCCAGTAGTGAC
AAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTGGAGTACATTCTTC
ACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTATGAAAAACAGttG
AAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGATCGCCAAGGGAGA
AGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATCAAAACAAAACGCG
AAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGCTGGCCCTTCATCc
aacaagaaaaacaaagaagaggAAATCAAAACCATGAATATCAATACGAA
CGCCCAGGAGAAGAAGAATCTTCCAAGTTTTTGGATTCCCTCCCTCACAC
CACAAGCCAGCCAATCAAGAGTAGAGAAGCCAGACAGTAAAGTGTACTGT
CCCATGAGTGGCAAACCTATCAAACTAAAAGACTTAATTTCCGTAAAATT
CACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAATCGATTGTCGCTA
GGAAACAGCGTTATATTTGTCCGGTTACTAGGGACGTTTTAAGTAACACT
GTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAGTTTCGATGGAATG
CGTTGAGAAGTTTATAAAGAAAGACTGGGTTTGTCCGATCACTGGACACA
AATTGAAAGAAAAGGATGTCATCGAGCTAAAACGTGGTGGAACAGGTTAC
TCGTCCGTTGGTAAAGACTCTCTTGAAGGAAAAGCGTATGGGCCAACCAT
GATGGTCAGCTAGaataagaaaaaacaacaacataatATGACACGCCATG
GTAAAAATTGTACGGCAGGTGCTGTGTACACATATCATGAAAAGCAGAAA
GACACCAAACAATCAGGATGGGGTTCGCAACAAGCTCGATACAGTAAAGA
CTCCATCAAAGATTTTGACTGCTGCTCATTGACTCTTCAGCCCTGCAAGG
ACCCAGTAGTGACAAAAGAAGGCCACCTGTATGAGAGAGAAGTCATACTG
GAGTACATTCTTCACCAAAAACAAGCCAAcaacaagaaaatgaaagcCTA
TGAAAAACAGttGAAAAAAGACGAGAAAACACAAACAGAAGAGGAAGAGA
TCGCCAAGGGAGAAGTTGTCACCAAATTTCTCACAACAGAAAAAGCCATC
AAAACAAAACGCGAAAATCCATTCAAAAGTGAGAAAAGTGAAGACCAAGC
TGGCCCTTCATCcaacaagaaaaacaaagaagaggAAATCAAAACCATGA
ATATCAATACGAACGCCCAGGAGAAGAAGAATCTTCCAAGTTTTTGGATT
CCCTCCCTCACACCACAAGCCAGCCAATCAAGAGTAGAGAAGCCAGACAG
TAAAGTGTACTGTCCCATGAGTGGCAAACCTATCAAACTAAAAGACTTAA
TTTCCGTAAAATTCACTCTGGCGCCTGCTGACGAATCAGATAAGCAGAAA
TCGATTGTCGCTAGGAAACAGCGTTATATTTGTCCGGTTACTAGGGACGT
TTTAAGTAACACTGTCCGATCGGCGGTGCTGAAACCGTCCGGTAATGTAG
TTTCGATGGAATGCGTTGAGAAGTTTATAAAGAAAGACTGGGTTTGTCCG
ATCACTGGACACAAATTGAAAGAAAAGGATGTCATCGAGCTAAAACGTGG
TGGAACAGGTTACTCGTCCGTTGGTAAAGACTCTCTTGAAGGAAAAGCGT
ATGGGCCAACCATGATGGTCAGCTAGaataagaaaaaacaacaacataat
ATGACACGCCATGGTAAAAATTGTACGGCAGGTGCTGTGTACACATATCA
TGAAAAGCAGAAAGACACCAAACAATCAGGATGGGGTTCGCAACAAGCTC
GATACAGTAAAGACTCCATCAAAGATTTTGACTGCTGCTCATTGACTCTT
CAGCCCTGCAAGGACCCAGTAGTGACAAAAGAAGGCCACCTGTATGAGAG
AGAAGTCATACTGGAGTACATTCTTCACCAAAAACAAGCCAAcaacaaga
aaatgaaagcCTATGAAAAACAGttGAAAAAAGACGAGAAAACACAAACA
GAAGAGGAAGAGATCGCCAAGGGAGAAGTTGTCACCAAATTTCTCACAAC
AGAAAAAGCCATCAAAACAAAACGCGAAAATCCATTCAAAAGTGAGAAAA
GTGAAGACCAAGCTGGCCCTTCATCcaacaagaaaaacaaagaagaggAA
ATCAAAACCATGAATATCAATACGAACGCCCAGGAGAAGAAGAATCTTCC
AAGTTTTTGGATTCCCTCCCTCACACCACAAGCCAGCCAATCAAGAGTAG
AGAAGCCAGACAGTAAAGTGTACTGTCCCATGAGTGGCAAACCTATCAAA
CTAAAAGACTTAATTTCCGTAAAATTCACTCTGGCGCCTGCTGACGAATC
AGATAAGCAGAAATCGATTGTCGCTAGGAAACAGCGTTATATTTGTCCGG
TTACTAGGGACGTTTTAAGTAACACTGTCCGATCGGCGGTGCTGAAACCG
TCCGGTAATGTAGTTTCGATGGAATGCGTTGAGAAGTTTATAAAGAAAGA
CTGGGTTTGTCCGATCACTGGACACAAATTGAAAGAAAAGGATGTCATCG
AGCTAAAACGTGGTGGAACAGGTTACTCGTCCGTTGGTAAAGACTCTCTT
GAAGGAAAAGCGTATGGGCCAACCATGATGGTCAGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036252XLOC_036252Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057512-proteinTCONS_00057512-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057512-exon-scaffold_291-1491911889:116409..116707TCONS_00057512-exon-scaffold_291-1491911889:116409..116707Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1510915933:116409..116707TCONS_00057512-exon-scaffold_291-1510915933:116409..116707Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1575043694:116409..116707TCONS_00057512-exon-scaffold_291-1575043694:116409..116707Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1491911889:118566..118767TCONS_00057512-exon-scaffold_291-1491911889:118566..118767Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1510915933:118566..118767TCONS_00057512-exon-scaffold_291-1510915933:118566..118767Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1575043694:118566..118767TCONS_00057512-exon-scaffold_291-1575043694:118566..118767Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1491911889:119890..121056TCONS_00057512-exon-scaffold_291-1491911889:119890..121056Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1510915933:119890..121056TCONS_00057512-exon-scaffold_291-1510915933:119890..121056Clytia hemisphaericaexon
TCONS_00057512-exon-scaffold_291-1575043694:119890..121056TCONS_00057512-exon-scaffold_291-1575043694:119890..121056Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_291supercontigscaffold_291:116409..121056 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.6169	29.7958	26.783	33.5355	43.4168	37.1848	42.2101	40.7195	25.4908	24.4606	20.3985	15.8222	16.506	16.2516	18.3831	17.7539	30.174	27.4355	11.0892	13.0377	18.265	19.0505	55.901	48.4724	26.4469	26.3061	18.9515	18.0152	33.7988	39.3002
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD
IPR031790Znf-NOSIP
IPR027799Rtf2_RING-finger
IPR016818Nitric_oxide_synth-interacting
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO:0050999regulation of nitric-oxide synthase activity
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0050999 regulation of nitric-oxide synthase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
Blast
[Close]
BLAST of TCONS_00057512 vs. Swiss-Prot (Human)
Match: NOSIP (Nitric oxide synthase-interacting protein OS=Homo sapiens GN=NOSIP PE=1 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 5.914e-99
Identity = 160/302 (52.98%), Postives = 202/302 (66.89%), Query Frame = 3 
Query:   27 MTRHGKNCTAGAVYTYHEKQKDTKQSGWGSQQARYSKDSIKDFDCCSLTLQPCKDPVVTKEGHLYEREVILEYILHQKQANNKKMKAYXXXXXXXXXXXXXXXXIAKGEVVTKFLTTEKAIKTKRENPFK----SEKSED--QAGPSSXXXXXXXXXXXXXXXTNAQEKKNLPSFWIPSLTPQASQSRVEKPDSKVYCPMSGKPIKLKDLISVKFTLAPADESDKQKSIVARKQRYICPVTRDVLSNTVRSAVLKPSGNVVSMECVEKFIKKDWVCPITGHKLKEKDVIELKRGGTGYSSVG 914
            MTRHGKNCTAGAVYTYHEK+KDT  SG+G+Q  R S+D++KDFDCC L+LQPC DPVVT +G+LYERE ILEYILHQK+   ++MKAYEKQ     + Q E +  A  + V  FL  E AI ++  NPF     S  S D  Q GPS                 +  + K LPSFWIPSLTP+A  +++EKP   V CPMSGKP+++ DL  V FT  P D S  +  ++ R +RY+C VTRD LSN    AVL+PSG VV++ECVEK I+KD V P+TG KL ++D+I L+RGGTG++  G
Sbjct:    1 MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFDCCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKKEIARQMKAYEKQRGTRREEQKELQRAASQDHVRGFLEKESAIVSRPLNPFTAKALSGTSPDDVQPGPS-------------VGPPSKDKDKVLPSFWIPSLTPEAKATKLEKPSRTVTCPMSGKPLRMSDLTPVHFT--PLDSSVDRVGLITRSERYVCAVTRDSLSNATPCAVLRPSGAVVTLECVEKLIRKDMVDPVTGDKLTDRDIIVLQRGGTGFAGSG 287
The following BLAST results are available for this feature:
BLAST of TCONS_00057512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOSIP5.914e-9952.98Nitric oxide synthase-interacting protein OS=Homo ... [more]
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