|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057683 ID=TCONS_00057683|Name=TCONS_00057683|organism=Clytia hemisphaerica|type=transcript|length=3564bp GCATTattggtttttgttttgattggaaagGACTAGCCACTGATGGTCTC TGAGTATACTGTCACTGAATAAACCATTGTCATCATAAACCTCAGAAAGA TTAGATTCAGCAAAGGGGTTTTCATCGCCAGGTTTTCGAGCTACTAATGA TTCCCCTGGTTTCGCAAAAGAATGATTTGAGTACCTCATTTAACTAGCTC TCTTTAAGTAACTCTTCATACCTATCTTAacgtattttttatattttggc cCTTTGAAGATTAAATTAGAGAGGAAAAACTGTACCCAACGTTCAATGAT CAGTTCTTAGAAATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCT GGTGATCCTCAATATCCTTTGTGGACATCTGAAAGCCAAAAGACAATGTG GAAATATCACTTGTATCTCACTCAATGGATTTTGCATTGGTAATTCTAAA TGTGAATGTAACTATGGCTGGTTTGGGCCAACGTGTGAGAAGCCTTGCCA GTGTAATGGTTTGTCTCCTTGTGACAAAGATTCTGGTAAATGTTTGCAAT GTGTCAATCATTCTGAGggtgaaaattgtcAACGATGCAAACCTGGTTAT ATAGGAAGTCCACAACACAACCAACAATGTATATCATGTCAAGAATTTTG TCATGGAAAATCAAACATCTGTGTCACTTCAAATTCTTACAACTTTTGGA AAGGCATTATTGAAAACGATAATCTGAGACCCTATCAAGTTATAAAATTG CTCTCAGATGCTATGGCCTTGAATCCTTCCATTCCCAATGAAGCGAGCTG TTTGTACTGCAAAGATGGAAGATACGGTCATCGCTGTCAACTTTCTTGTG GTAAAGGTTACTATAGAACAAAAGACAAAGGTTGTAAAAGGTGTAGCTGT AACGAGCATGCCACTCAGTGTGACCAAGGGACTGGTCAAGGTTGTCGTTG TCTTCATAACACACTCACTAAAGGCACTTACCAATGCCTCGACCATCGAA CTTGTCTTCTACTGCAGTGTTCGTATTGTCGTAACGGTTACATCGGGTCC CCTACAAACGGTAAACAATGCTACAAAAAAACCAATGAGAATTTCCTCTA CGAAGACAATCTTCATCTGGGAAATATAAAATCGTATGTTTTAAGCTACG ATCAAGATCAAGGGATACGACTCAATGTTGATGTCATAGAAGGCGCTGTT GATATTTATCTCACCGATAACAAACATGTTTTCAGAGCAACGTTAAATGA AAATGGTACACAAAACCTGTTTTACAACGACAATGAAAAGCCGACTCCCG AGTATACAACCGATGAAGATATATCGGCGGTTTTACTCGGTAACCAACTA ATCACTTTCAAGAGATACCAGAAAGGAGTTTTAGCTATGAAGAATATGCA ACACCGCGCCATAATTACTATAGACCCACAAGATGAACATCTTCGGAGAG TTCAGTTTTACGTAGTGATTAAGAAGAGCGACGATTCAAGACCCATAGCA AAAACAACATTGTATTATGATCAGGGAATACTGGCCCTAGACATGAAGCT ACTCTTTGTTGGCCTCCTAATGAGCGCTTTAACGCTGGTTGTTGAGCTAA CTTTAGTGTTCCGATTAAGGAGCGAGTATATGAATAACCTGAACAACGAA CTGAATAATACACATCTAAAGGAGCTTGAAAATAGACCTATGCTTCAATA CATATTTGATGCACCACCGTTGAGTTTTCAGCACGAGAGAAGAGACTTAA GAGTATTACCAGTAGCGGTACAACAAACAGCATTTGATGACGATGTTGCA TTTTTTTCAGTACTGGTTCAACTACCAGGTTATCAAAACTCGAAATGTGA TATCACTTTTGGTACTGGgattttccttttgaaaagtGAGACTAAAGATT CGAAAAGAATTGAAACTATTAAACGAACCACGACAGAAGAGTACGATCTA GAACATATTAATTACGGGCACAATATAGcatgatttattttttctggCGC TTTATAATACAGATATTAGaccattaaaatttttcttaccatttttcttt tccctctttctgaccatcttgctccacatccgtgtcaatccaatgttaaa aagcttATGAATTCAAATTGATGATTAAGCAAACGATACTAGtcttattc ataaaaaaaaccttttaattttggacatatttatATTTACCACATTATCA TTTTCGGAAACttttaataaataatataaaatcttCGCGTAtcaaaaact ttgtaaacaGAATAAAAATGAACACCATAACATTTAAAACGactcaattt aaaaatatgtaggGAATATTGGTTTTTACCAAGGCGTTATCTCCCAACAT TTCCATTTAATCTCTAGCGAGTCAACTTCATTTCGAAGGTATTTCATCAA CTATCAAGAATAGCAATTTCTTCAATAATCAACCAGTTTGGAATTCCTTT CGTTTTCTGGACAGCTGTCAACTCCAGTTTGACACACCGAACGTTTTCTT TAGGTTCATCAAAAGTAATATCAACTATTGCTTCTTTGTAAAATTTCACC AGCTCAAACTTCCCACATTTCGAATTCGTGTTACCTTTCATTTGAGAGAT GTATAATTTAGTTTCATAGAAGCTGTCTTTTTCATGTCCATCCATTCCGC TAGAGATAAAGATCCTCTTGATTTTCTGTGGAGAATTAAACATTATCGTC AGTGTGTCACCATCCTTAGGTTTTGTTGCCCACATTACACCTTTGCTCGA GTATGGGTTCTCTAACACATTGCTTTTATAGAATCCCGATAAATCCGATT CTATTTCGGCAACGGGATTTCCTTTTACCGATTGGAATTGTCGTCGACCA ACTATCGGGATATCCTTTAAATCCTCGAGTTTTCTCACTTGACCATTCAA GGAAGAGAATTTACCGACATGCAAGAAAACAGGTTTCTTTATGCGAAAat tctttggatttttataCAAGTAGATATCATTATAAACTCGAAAAAGTAAA TCAACTGGCATGGTCCAAAAGAAATATCTGACAAATTTTGCCAACGATTC TAAATGCTCTCCCCGATAAGTCATTCCGATAAATCCTCGGGCACCAAGCT CAAGAACCGACCAACGAAGTTTGTCGTTTTTCGTTATGAATTGTCGCATT TTCTGCATAAAATCATCAACAGCAATTATATCATCTTCAAGCTGAACAAA ATATTGCGCCATATCTTTACAGTAATAATATAAGtatgaataatcgagac attgCTTCGATCTCCAGCGGACTCGATCTTGTTTATCGCCAAACAGTCTT GGCAAATTATCCAGATTCTTAGGATAGTAGGCTTTATCAGGAGCAACCAC TTGAATGATACCGTCTTTAACTTCGACTGGAAAGTTCTCTCGAACATCTT TTACGACTTTCCTAAGAAAACCTTCGTCAAGATCTGCCACAAAAATGACG ATGACAACATTTTTCCTTTCTGAAGTTTTCATGTGTTTGAGCAAAGAGGA TACCGTTTGGATGACATAATAAGCTTTACTTCTCTTGACGGTTGGAATCC CAAAAACAACGAAA Run BLAST on NCBI protein sequence of TCONS_00057683-protein >TCONS_00057683-protein ID=TCONS_00057683-protein|Name=TCONS_00057683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=556bp
MLKKKTSWSLTALVILNILCGHLKAKRQCGNITCISLNGFCIGNSKCECN YGWFGPTCEKPCQCNGLSPCDKDSGKCLQCVNHSEGENCQRCKPGYIGSP QHNQQCISCQEFCHGKSNICVTSNSYNFWKGIIENDNLRPYQVIKLLSDA MALNPSIPNEASCLYCKDGRYGHRCQLSCGKGYYRTKDKGCKRCSCNEHA TQCDQGTGQGCRCLHNTLTKGTYQCLDHRTCLLLQCSYCRNGYIGSPTNG KQCYKKTNENFLYEDNLHLGNIKSYVLSYDQDQGIRLNVDVIEGAVDIYL TDNKHVFRATLNENGTQNLFYNDNEKPTPEYTTDEDISAVLLGNQLITFK RYQKGVLAMKNMQHRAIITIDPQDEHLRRVQFYVVIKKSDDSRPIAKTTL YYDQGILALDMKLLFVGLLMSALTLVVELTLVFRLRSEYMNNLNNELNNT HLKELENRPMLQYIFDAPPLSFQHERRDLRVLPVAVQQTAFDDDVAFFSV LVQLPGYQNSKCDITFGTGIFLLKSETKDSKRIETIKRTTTEEYDLEHIN YGHNIA Run BLAST on NCBI transcript from alignment at scaffold_297:112903..120282- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057683 ID=TCONS_00057683|Name=TCONS_00057683|organism=Clytia hemisphaerica|type=transcript|length=7380bp|location=Sequence derived from alignment at scaffold_297:112903..120282- (Clytia hemisphaerica) GCATTATTGGTTTTTGTTTTGATTGGAAAGGACTAGCCACTGATGGTCTC
TGAGTATACTGTCACTGAATAAACCATTGTCATCATAAACCTCAGAAAGA
TTAGATTCAGCAAAGGGGTTTTCATCGCCAGGTTTTCGAGCTACTAATGA
TTCCCCTGGTTTCGCAAAAGAATGATTTGAGTACCTCATTTAACTAGCTC
TCTTTAAGTAACTCTTCATACCTATCTTAACGTATTTTTTATATTTTGGC
CCTTTGAAGATTAAATTAGAGAGGAAAAACTGTACCCAACGTTCAATGAT
CAGTTCTTAGAAATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCT
GGTGATCCTCAATATCCTTTGTGGACATCTGAAAGCCAAAAGACAATGTG
GAAATATCACTTGTATCTCACTCAATGGATTTTGCATTGGTAATTCTAAA
TGTGAATGTAACTATGGCTGGTTTGGGCCAACGTGTGAGAAGCCTTGCCA
GTGTAATGGTTTGTCTCCTTGTGACAAAGATTCTGGTAAATGTTTGCAAT
GTGTCAATCATTCTGAGGTAAATAATATCTCAATGATGCTTCACAAGGAA
TTCATGATATGCACCATTGGAGAGTCTTCTGAGAACTTTTAAAATTTTCC
ACCCAATACGTCACTTAAAAAAAAGAATGACGTATTGGGTGGAATTTTTG
GAAGATTCTTGGAAGACTCTTCAGTGGTGCATATCTTGAATATCCAGTAA
GCTGGAGCTTTTTAGACAGTCTTTTGATTTGTTAGACAGCACTCCTTTCC
AACCAACATTAGATTATCTGCCTGTCCCATTGAATATCAATATTTGTTGA
AAAGGTACGAAAGCGTAACGACGGCAAATATTTTCGATAACTCTCTTCCT
TTATGCTAAAAACTGATGCATTTGGGGTGAAAATAGCTGATCAGAGGCGC
ATTTTTGGTGGTGTTTGCCTTTAAAAAAAAAGTCGTTTGGGATTGGGGTA
GTTGTTGCCCCTCTCTACCTTCCCTGTCAATGACTGAATCAACAACCTTG
CGCAAAAAATATTATAAATTCTGTCAACCTTTCTTATATTCAGGGTGAAA
ATTGTCAACGATGCAAACCTGGTTATATAGGAAGTCCACAACACAACCAA
CAATGTATATCATGTCAAGAATTTTGTCATGGAAAATCAAACATCTGTGT
CACTTCAAATTCTTACAACTTTTGGAAAGGCATTATTGAAAACGATAATC
TGAGACCCTATCAAGTTATAAAATTGGTAAGTATATTATTTTTAGATACC
CCTGTTTCACGGATTGCTCTCACTGGAAAATTTGTGGAAAATCATTCAGC
GAAAAAGATTTTACCCAGCACATAAGCCAAGTCACAATAAGTCACTTGGT
GCTTGAATTCATTCGCAATAAATGCCCACTAATTTAGAAACTACTCTCAT
GCTGATATTTTCTCTACATGGTAATGCAAAAAGTCCACAATCAAAACGAA
TGAGCTTTGGTTATGAGCTTCAATTAAACATAAGAGATGGACCGCTTATG
AAATCTTATCAGGAATTCAAATAATGTCAAAAGTCCAGTTAGTTGCTGCT
TAAAATCTCTTTGTCTCGGAAAGTATACAAAGTATGCGAGAGTATGCGAT
ATTATGTTTGGATACTCTACATGTATACGAATTACCCTCTTTTTTTCCTT
ACCATAGCTCTCAGATGCTATGGCCTTGAATCCTTCCATTCCCAATGAAG
CGAGCTGTTTGTACTGCAAAGATGGAAGATACGGTCATCGCTGTCAACTT
TCTTGTGGTAAAGGTTACTATAGAACAAAAGACAAAGGTTGTAAAAGGTT
AGTAATTGTAGCTGAAACTTAAGGGCGTACAGTGAAATCTTCATAACTCA
AACATCTATTACTCAAATGTCTCCTTAACTCGAACAAGTTTGTTGGTCCC
TTCAATAAACAATGCCTTATAAACTAGTCTCCATAACTCGAAATGTCNGC
CCTTACGGGCGAAAAGTTTTGAAAAAGTGCACTGTAAGGGTATCATTTTT
CATGGAAATTCACTGCACTGTAAGGGTCAGATTTTAGAAGCCAAATTTTG
GGCCGAACGTATGGTCGTTTTCAGATCAAGTGCCCCCCCCCCGGGCTGAA
GTTCATTCGTAATGTAGAAACCACTCTCATGCTGATATAAAGTCCACGAT
CAAAACGAATGAACTTGGATATAAGCTTCAATTAGAAATCCTTCACATGT
ATACAAATGGAATTTTCTTTCTTTCCATAAAGCTCTCAGATTCTATGATG
GCTTCAATTCCCAGTGAAGCGAGCTGTTTGTACTGCAAAGATGGAAGATA
CGGTCATCGTTGTCAACTTTCTTGTGGTAAAGGTTACTATAGAACAAAAG
ACAAAGGTTGTAAAAGGTTAGTAATTGTAGCTGAAACTTAAGGGCGTACA
ATAAAATCTTCATAACTCAAACATCTATTACTCAAATGTCTCCTTAACTC
GAACAAGTTTGTTGGTCCCTTCAATAAACAATGCCTTATAAACTAGTCTC
CATAACTCGAAATGTCCAAAACTCGAACAAGTTTGCGTTGGGTGTTCGAG
TTATGGGGACTCTACTGTATAATCTTTTCCGATATTTGCGCATTTTTCAT
AAAAAGTAAGTTTTGTGCGTTCCGATGATTAGATACAACACCACATTGCT
TCTTCATAGAGATTCAGTTTTTGTAAGTTTATAAACAGAGGATATCTGCT
CATGAAAATTATATTTTCCTTCAAATCTTGTGCACTTTCTATCGGAAGCC
TCCAGTTTCTTGATGTTTTACCGTACGAGCCAGATAAAACAGTGCCAATC
AGTAAAAGTAATAAAGCCTTGGTTAGGCTGCTGGCATCCACTAACGGATT
GGTGCTCCTTATATATACTACTTTCAGTTTTGTAGAGGTCTGTAATTCAG
ACTAAGCATCGGTTAAATACACGAGAACGCCCGGGGGGTACTACCCTTGT
CGACCGACGGGGGTGCTCCGCTGAGGTTCGAAAAATGGACCCTACGTGGG
ACTCAAAATTTACGAAAAAAGTGACCCTGAATGGGACTGAAATTCCAAAA
TGTTCTCAAATTTTCTACTTTTTCCCCAAATTTTCCAAAAATAGGCACCC
TACGAGGGACTGATTTTTTTATTTTGGCCGTTTTTGCGACCCTACCTGGG
ACTCGTGGAGGTTAAAAAAGGTACCCTAACCAGCGGAGCATCCCCGTAAC
CCATCTTGCCCTAGTACCCCCCCCCCCCGCGCCCCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCCCCCCCCCCCCGGGCGAGGACGAGTGGGTTTTT
CAGATAACCGTAAGAAAATTTTCATCTTAGGTGTAGCTGTAACGAGCATG
CCACTCAGTGTGACCAAGGGACTGGTCAAGGTTGTCGTTGTCTTCATAAC
ACACTCACTAAAGGCACTTACCAATGCCTCGACCATCGAACTTGTCTTCT
ACTGCAGGTTAGTAACTCCGCTTTATATACCTTATAACACACATATTACT
AGGTAAGTATTCAACGGCCTTGAAATCTGCACAAATTTTTCTGCTTTTTC
AAGGAAACAATGGCTGATTTAAATTAAGGGGGTTTTTATTCACACGAAAT
TTTTCAATTCGTGTAATTAAAATGACTAGTAATATTTGTGTAATAAGGTA
ATACACATAATCTTATACAAAACATTAGATAGGGCTACTCCATCCTTCCC
AAGCCAAGAGATTTGAAGTAAATTATTGCGCCATATTTACAAAAAATAGA
CCACCAGTCGGCGCCGGCAATCTGTTAATCAAAACGAACAACTACTACCA
TGGCGCGAAGTGAGAAGGGGAGGGAATAGTCTTGATTCATCAAATTTCTA
GCAACAAAATTTGATTTAATTTTAAAGATAATTTAATGCACTATTTAGCA
TAATAGAATAAGATTTTAGCTACTCTCGGGTACCTAATAGCCGGGGGGGG
GGGTTGGAAAAAAAATGTCCTGGGGGGAAAAATTTTGAAAAGGAGGCTAA
TACAGCTGAATTGGGACAAAAGAGGCAACTTTCAAAAACATTTTCTCAAA
AATTAATAAGCGGGGGGGGGGGGGGGATTGGAATAAGCGGGGGTTGGAAA
AAAAATGTCCTGGGGGGAAAAATTTTGAAAAGGAGGCTAATACAGCTGAA
TTGGGACAAAAGAGGCAACTTTCAAAAACATTTTCTCAAAAATTAATAAG
CGGGGGGGGGGGGGGGATTGGAATAAGCGGGGGTTGGAAAAAAAATGTCC
TGGGGGGAAAATTAATTAGCGGGGGGGGGGAGGGCTATTAGTTACCCGAG
AGTAATACTAACGAGTCTTTTCGAGCTGTAAAGAATACCTTAAGTGGATA
AATTTTGGCGGGGATTACATTTGGCGAATTTGACGAATTTTGCCGAAATT
CGCCAAATTAAATCCCCGCCAAATTTAACAAAAAGAGAATTATGAGAAAA
ATCACCAATTCCAATTTGCCAAATTAAATCCCCGCCAAATGTTACAAAAT
TGATTTATCGCCAAATTAAATCCCCGCTAAAAATTGTATTTTGGCCAATT
GCCAAATTAAGTCCACGCCAAAATTTATCCACTTTAGTTGAAACCTATAG
CTCTAAGCATAGCAATTTGAAAAATCTCACCCCTAATCTCATTGAACTTC
TTAATTTCAGTACAATAAGGCAAAAAAAAAAGTTTTACCTTACCACTTAT
TTTTAACTTGCTTAAACATCAATTTCTTTACAGTGTTCGTATTGTCGTAA
CGGTTACATCGGGTCCCCTACAAACGGTAAACAATGCTACAAAAAAACCA
ATGAGAATTTCCTCTACGAAGACAATCTTCATCTGGGAAATATAAAATCG
TATGTTTTAAGCTACGATCAAGATCAAGGGATACGACTCAATGTTGATGT
CATAGAAGGCGCTGTTGATATTTATCTCACCGATAACAAACATGTTTTCA
GAGCAACGTTAAATGAAAATGGTACACAAAACCTGTTTTACAACGACAAT
GAAAAGCCGACTCCCGAGTATACAACCGATGAAGATATATCGGCGGTTTT
ACTCGGTAACCAACTAATCACTTTCAAGAGATACCAGAAAGGAGTTTTAG
CTATGAAGAATATGCAACACCGCGCCATAATTACTATAGACCCACAAGAT
GAACATCTTCGGAGAGTTCAGTTTTACGTAGTGATTAAGAAGAGCGACGA
TTCAAGACCCATAGCAAAAACAACATTGTATTATGATCAGGGAATACTGG
CCCTAGACATGAAGCTACTCTTTGTTGGCCTCCTAATGAGCGCTTTAACG
CTGGTTGTTGAGCTAACTTTAGTGTTCCGATTAAGGAGCGAGTATATGAA
TAACCTGAACAACGAACTGAATAATACACATCTAAAGGAGCTTGAAAATA
GACCTATGCTTCAATACATATTTGATGCACCACCGTTGAGTTTTCAGCAC
GAGAGAAGAGACTTAAGAGTATTACCAGTAGCGGTACAACAAACAGCATT
TGATGACGATGTTGCATTTTTTTCAGTACTGGTTCAACTACCAGGTTATC
AAAACTCGAAATGTGATATCACTTTTGGTACTGGGATTTTCCTTTTGAAA
AGTGAGACTAAAGATTCGAAAAGAATTGAAACTATTAAACGAACCACGAC
AGAAGAGTACGATCTAGAACATATTAATTACGGGCACAATATAGCATGAT
TTATTTTTTCTGGCGCTTTATAATACAGATATTAGACCATTAAAATTTTT
CTTACCATTTTTCTTTTCCCTCTTTCTGACCATCTTGCTCCACATCCGTG
TCAATCCAATGTTAAAAAGCTTATGAATTCAAATTGATGATTAAGCAAAC
GATACTAGTCTTATTCATAAAAAAAACCTTTTAATTTTGGACATATTTAT
ATTTACCACATTATCATTTTCGGAAACTTTTAATAAATAATATAAAATCT
TCGCGTATCAAAAACTTTGTAAACAGAATAAAAATGAACACCATAACATT
TAAAACGACTCAATTTAAAAATATGTAGGGAATATTGGTTTTTACCAAGG
CGTTATCTCCCAACATTTCCATTTAATCTCTAGCGAGTCAACTTCATTTC
GAAGGTATTTCATCAACTATCAAGAATAGCAATTTCTTCAATAATCAACC
AGTTTGGAATTCCTTTCGTTTTCTGGACAGCTGTCAACTCCAGTTTGACA
CACCGAACGTTTTCTTTAGGTTCATCAAAAGTAATATCAACTATTGCTTC
TTTGTAAAATTTCACCAGCTCAAACTTCCCACATTTCGAATTCGTGTTAC
CTTTCATTTGAGAGATGTATAATTTAGTTTCATAGAAGCTGTCTTTTTCA
TGTCCATCCATTCCGCTAGAGATAAAGATCCTCTTGATTTTCTGTGGAGA
ATTAAACATTATCGTCAGTGTGTCACCATCCTTAGGTTTTGTTGCCCACA
TTACACCTTTGCTCGAGTATGGGTTCTCTAACACATTGCTTTTATAGAAT
CCCGATAAATCCGATTCTATTTCGGCAACGGGATTTCCTTTTACCGATTG
GAATTGTCGTCGACCAACTATCGGGATATCCTTTAAATCCTCGAGTTTTC
TCACTTGACCATTCAAGGAAGAGAATTTACCGACATGCAAGAAAACAGGT
TTCTTTATGCGAAAATTCTTTGGATTTTTATACAAGTAGATATCATTATA
AACTCGAAAAAGTAAATCAACTGGCATGGTCCAAAAGAAATATCTGACAA
ATTTTGCCAACGATTCTAAATGCTCTCCCCGATAAGTCATTCCGATAAAT
CCTCGGGCACCAAGCTCAAGAACCGACCAACGAAGTTTGTCGTTTTTCGT
TATGAATTGTCGCATTTTCTGCATAAAATCATCAACAGCAATTATATCAT
CTTCAAGCTGAACAAAATATTGCGCCATATCTTTACAGTAATAATATAAG
TATGAATAATCGAGACATTGCTTCGATCTCCAGCGGACTCGATCTTGTTT
ATCGCCAAACAGTCTTGGCAAATTATCCAGATTCTTAGGATAGTAGGCTT
TATCAGGAGCAACCACTTGAATGATACCGTCTTTAACTTCGACTGGAAAG
TTCTCTCGAACATCTTTTACGACTTTCCTAAGAAAACCTTCGTCAAGATC
TGCCACAAAAATGACGATGACAACATTTTTCCTTTCTGAAGTTTTCATGT
GTTTGAGCAAAGAGGATACCGTTTGGATGACATAATAAGCTTTACTTCTC
TTGACGGTTGGAATCCCAAAAACAACGAAA Coding sequence (CDS) from alignment at scaffold_297:112903..120282- >TCONS_00057683 ID=TCONS_00057683|Name=TCONS_00057683|organism=Clytia hemisphaerica|type=CDS|length=8355bp|location=Sequence derived from alignment at scaffold_297:112903..120282- (Clytia hemisphaerica) TGTTCGTATTGTCGTAACGGTTACATCGGGTCCCCTACAAACGGTAAACA ATGCTACAAAAAAACCAATGAGAATTTCCTCTACGAAGACAATCTTCATC TGGGAAATATAAAATCGTATGTTTTAAGCTACGATCAAGATCAAGGGATA CGACTCAATGTTGATGTCATAGAAGGCGCTGTTGATATTTATCTCACCGA TAACAAACATGTTTTCAGAGCAACGTTAAATGAAAATGGTACACAAAACC TGTTTTACAACGACAATGAAAAGCCGACTCCCGAGTATACAACCGATGAA GATATATCGGCGGTTTTACTCGGTAACCAACTAATCACTTTCAAGAGATA CCAGAAAGGAGTTTTAGCTATGAAGAATATGCAACACCGCGCCATAATTA CTATAGACCCACAAGATGAACATCTTCGGAGAGTTCAGTTTTACGTAGTG ATTAAGAAGAGCGACGATTCAAGACCCATAGCAAAAACAACATTGTATTA TGATCAGGGAATACTGGCCCTAGACATGAAGCTACTCTTTGTTGGCCTCC TAATGAGCGCTTTAACGCTGGTTGTTGAGCTAACTTTAGTGTTCCGATTA AGGAGCGAGTATATGAATAACCTGAACAACGAACTGAATAATACACATCT AAAGGAGCTTGAAAATAGACCTATGCTTCAATACATATTTGATGCACCAC CGTTGAGTTTTCAGCACGAGAGAAGAGACTTAAGAGTATTACCAGTAGCG GTACAACAAACAGCATTTGATGACGATGTTGCATTTTTTTCAGTACTGGT TCAACTACCAGGTTATCAAAACTCGAAATGTGATATCACTTTTGGTACTG GGATTTTCCTTTTGAAAAGTGAGACTAAAGATTCGAAAAGAATTGAAACT ATTAAACGAACCACGACAGAAGAGTACGATCTAGAACATATTAATTACGG GCACAATATAGCATGAGTGTAGCTGTAACGAGCATGCCACTCAGTGTGAC CAAGGGACTGGTCAAGGTTGTCGTTGTCTTCATAACACACTCACTAAAGG CACTTACCAATGCCTCGACCATCGAACTTGTCTTCTACTGCAGCTCTCAG ATGCTATGGCCTTGAATCCTTCCATTCCCAATGAAGCGAGCTGTTTGTAC TGCAAAGATGGAAGATACGGTCATCGCTGTCAACTTTCTTGTGGTAAAGG TTACTATAGAACAAAAGACAAAGGTTGTAAAAGGGTGAAAATTGTCAACG ATGCAAACCTGGTTATATAGGAAGTCCACAACACAACCAACAATGTATAT CATGTCAAGAATTTTGTCATGGAAAATCAAACATCTGTGTCACTTCAAAT TCTTACAACTTTTGGAAAGGCATTATTGAAAACGATAATCTGAGACCCTA TCAAGTTATAAAATTGATGTTAAAGAAGAAAACCAGCTGGTCACTAACAG CTCTGGTGATCCTCAATATCCTTTGTGGACATCTGAAAGCCAAAAGACAA TGTGGAAATATCACTTGTATCTCACTCAATGGATTTTGCATTGGTAATTC TAAATGTGAATGTAACTATGGCTGGTTTGGGCCAACGTGTGAGAAGCCTT GCCAGTGTAATGGTTTGTCTCCTTGTGACAAAGATTCTGGTAAATGTTTG CAATGTGTCAATCATTCTGAGTGTTCGTATTGTCGTAACGGTTACATCGG GTCCCCTACAAACGGTAAACAATGCTACAAAAAAACCAATGAGAATTTCC TCTACGAAGACAATCTTCATCTGGGAAATATAAAATCGTATGTTTTAAGC TACGATCAAGATCAAGGGATACGACTCAATGTTGATGTCATAGAAGGCGC TGTTGATATTTATCTCACCGATAACAAACATGTTTTCAGAGCAACGTTAA ATGAAAATGGTACACAAAACCTGTTTTACAACGACAATGAAAAGCCGACT CCCGAGTATACAACCGATGAAGATATATCGGCGGTTTTACTCGGTAACCA ACTAATCACTTTCAAGAGATACCAGAAAGGAGTTTTAGCTATGAAGAATA TGCAACACCGCGCCATAATTACTATAGACCCACAAGATGAACATCTTCGG AGAGTTCAGTTTTACGTAGTGATTAAGAAGAGCGACGATTCAAGACCCAT AGCAAAAACAACATTGTATTATGATCAGGGAATACTGGCCCTAGACATGA AGCTACTCTTTGTTGGCCTCCTAATGAGCGCTTTAACGCTGGTTGTTGAG CTAACTTTAGTGTTCCGATTAAGGAGCGAGTATATGAATAACCTGAACAA CGAACTGAATAATACACATCTAAAGGAGCTTGAAAATAGACCTATGCTTC AATACATATTTGATGCACCACCGTTGAGTTTTCAGCACGAGAGAAGAGAC TTAAGAGTATTACCAGTAGCGGTACAACAAACAGCATTTGATGACGATGT TGCATTTTTTTCAGTACTGGTTCAACTACCAGGTTATCAAAACTCGAAAT GTGATATCACTTTTGGTACTGGGATTTTCCTTTTGAAAAGTGAGACTAAA GATTCGAAAAGAATTGAAACTATTAAACGAACCACGACAGAAGAGTACGA TCTAGAACATATTAATTACGGGCACAATATAGCATGAGTGTAGCTGTAAC GAGCATGCCACTCAGTGTGACCAAGGGACTGGTCAAGGTTGTCGTTGTCT TCATAACACACTCACTAAAGGCACTTACCAATGCCTCGACCATCGAACTT GTCTTCTACTGCAGCTCTCAGATGCTATGGCCTTGAATCCTTCCATTCCC AATGAAGCGAGCTGTTTGTACTGCAAAGATGGAAGATACGGTCATCGCTG TCAACTTTCTTGTGGTAAAGGTTACTATAGAACAAAAGACAAAGGTTGTA AAAGGGTGAAAATTGTCAACGATGCAAACCTGGTTATATAGGAAGTCCAC AACACAACCAACAATGTATATCATGTCAAGAATTTTGTCATGGAAAATCA AACATCTGTGTCACTTCAAATTCTTACAACTTTTGGAAAGGCATTATTGA AAACGATAATCTGAGACCCTATCAAGTTATAAAATTGATGTTAAAGAAGA AAACCAGCTGGTCACTAACAGCTCTGGTGATCCTCAATATCCTTTGTGGA CATCTGAAAGCCAAAAGACAATGTGGAAATATCACTTGTATCTCACTCAA TGGATTTTGCATTGGTAATTCTAAATGTGAATGTAACTATGGCTGGTTTG GGCCAACGTGTGAGAAGCCTTGCCAGTGTAATGGTTTGTCTCCTTGTGAC AAAGATTCTGGTAAATGTTTGCAATGTGTCAATCATTCTGAGTGTTCGTA TTGTCGTAACGGTTACATCGGGTCCCCTACAAACGGTAAACAATGCTACA AAAAAACCAATGAGAATTTCCTCTACGAAGACAATCTTCATCTGGGAAAT ATAAAATCGTATGTTTTAAGCTACGATCAAGATCAAGGGATACGACTCAA TGTTGATGTCATAGAAGGCGCTGTTGATATTTATCTCACCGATAACAAAC ATGTTTTCAGAGCAACGTTAAATGAAAATGGTACACAAAACCTGTTTTAC AACGACAATGAAAAGCCGACTCCCGAGTATACAACCGATGAAGATATATC GGCGGTTTTACTCGGTAACCAACTAATCACTTTCAAGAGATACCAGAAAG GAGTTTTAGCTATGAAGAATATGCAACACCGCGCCATAATTACTATAGAC CCACAAGATGAACATCTTCGGAGAGTTCAGTTTTACGTAGTGATTAAGAA GAGCGACGATTCAAGACCCATAGCAAAAACAACATTGTATTATGATCAGG GAATACTGGCCCTAGACATGAAGCTACTCTTTGTTGGCCTCCTAATGAGC GCTTTAACGCTGGTTGTTGAGCTAACTTTAGTGTTCCGATTAAGGAGCGA GTATATGAATAACCTGAACAACGAACTGAATAATACACATCTAAAGGAGC TTGAAAATAGACCTATGCTTCAATACATATTTGATGCACCACCGTTGAGT TTTCAGCACGAGAGAAGAGACTTAAGAGTATTACCAGTAGCGGTACAACA AACAGCATTTGATGACGATGTTGCATTTTTTTCAGTACTGGTTCAACTAC CAGGTTATCAAAACTCGAAATGTGATATCACTTTTGGTACTGGGATTTTC CTTTTGAAAAGTGAGACTAAAGATTCGAAAAGAATTGAAACTATTAAACG AACCACGACAGAAGAGTACGATCTAGAACATATTAATTACGGGCACAATA TAGCATGAGTGTAGCTGTAACGAGCATGCCACTCAGTGTGACCAAGGGAC TGGTCAAGGTTGTCGTTGTCTTCATAACACACTCACTAAAGGCACTTACC AATGCCTCGACCATCGAACTTGTCTTCTACTGCAGCTCTCAGATGCTATG GCCTTGAATCCTTCCATTCCCAATGAAGCGAGCTGTTTGTACTGCAAAGA TGGAAGATACGGTCATCGCTGTCAACTTTCTTGTGGTAAAGGTTACTATA GAACAAAAGACAAAGGTTGTAAAAGGGTGAAAATTGTCAACGATGCAAAC CTGGTTATATAGGAAGTCCACAACACAACCAACAATGTATATCATGTCAA GAATTTTGTCATGGAAAATCAAACATCTGTGTCACTTCAAATTCTTACAA CTTTTGGAAAGGCATTATTGAAAACGATAATCTGAGACCCTATCAAGTTA TAAAATTGATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCTGGTG ATCCTCAATATCCTTTGTGGACATCTGAAAGCCAAAAGACAATGTGGAAA TATCACTTGTATCTCACTCAATGGATTTTGCATTGGTAATTCTAAATGTG AATGTAACTATGGCTGGTTTGGGCCAACGTGTGAGAAGCCTTGCCAGTGT AATGGTTTGTCTCCTTGTGACAAAGATTCTGGTAAATGTTTGCAATGTGT CAATCATTCTGAGTGTTCGTATTGTCGTAACGGTTACATCGGGTCCCCTA CAAACGGTAAACAATGCTACAAAAAAACCAATGAGAATTTCCTCTACGAA GACAATCTTCATCTGGGAAATATAAAATCGTATGTTTTAAGCTACGATCA AGATCAAGGGATACGACTCAATGTTGATGTCATAGAAGGCGCTGTTGATA TTTATCTCACCGATAACAAACATGTTTTCAGAGCAACGTTAAATGAAAAT GGTACACAAAACCTGTTTTACAACGACAATGAAAAGCCGACTCCCGAGTA TACAACCGATGAAGATATATCGGCGGTTTTACTCGGTAACCAACTAATCA CTTTCAAGAGATACCAGAAAGGAGTTTTAGCTATGAAGAATATGCAACAC CGCGCCATAATTACTATAGACCCACAAGATGAACATCTTCGGAGAGTTCA GTTTTACGTAGTGATTAAGAAGAGCGACGATTCAAGACCCATAGCAAAAA CAACATTGTATTATGATCAGGGAATACTGGCCCTAGACATGAAGCTACTC TTTGTTGGCCTCCTAATGAGCGCTTTAACGCTGGTTGTTGAGCTAACTTT AGTGTTCCGATTAAGGAGCGAGTATATGAATAACCTGAACAACGAACTGA ATAATACACATCTAAAGGAGCTTGAAAATAGACCTATGCTTCAATACATA TTTGATGCACCACCGTTGAGTTTTCAGCACGAGAGAAGAGACTTAAGAGT ATTACCAGTAGCGGTACAACAAACAGCATTTGATGACGATGTTGCATTTT TTTCAGTACTGGTTCAACTACCAGGTTATCAAAACTCGAAATGTGATATC ACTTTTGGTACTGGGATTTTCCTTTTGAAAAGTGAGACTAAAGATTCGAA AAGAATTGAAACTATTAAACGAACCACGACAGAAGAGTACGATCTAGAAC ATATTAATTACGGGCACAATATAGCATGAGTGTAGCTGTAACGAGCATGC CACTCAGTGTGACCAAGGGACTGGTCAAGGTTGTCGTTGTCTTCATAACA CACTCACTAAAGGCACTTACCAATGCCTCGACCATCGAACTTGTCTTCTA CTGCAGCTCTCAGATGCTATGGCCTTGAATCCTTCCATTCCCAATGAAGC GAGCTGTTTGTACTGCAAAGATGGAAGATACGGTCATCGCTGTCAACTTT CTTGTGGTAAAGGTTACTATAGAACAAAAGACAAAGGTTGTAAAAGGGTG AAAATTGTCAACGATGCAAACCTGGTTATATAGGAAGTCCACAACACAAC CAACAATGTATATCATGTCAAGAATTTTGTCATGGAAAATCAAACATCTG TGTCACTTCAAATTCTTACAACTTTTGGAAAGGCATTATTGAAAACGATA ATCTGAGACCCTATCAAGTTATAAAATTGATGTTAAAGAAGAAAACCAGC TGGTCACTAACAGCTCTGGTGATCCTCAATATCCTTTGTGGACATCTGAA AGCCAAAAGACAATGTGGAAATATCACTTGTATCTCACTCAATGGATTTT GCATTGGTAATTCTAAATGTGAATGTAACTATGGCTGGTTTGGGCCAACG TGTGAGAAGCCTTGCCAGTGTAATGGTTTGTCTCCTTGTGACAAAGATTC TGGTAAATGTTTGCAATGTGTCAATCATTCTGAGTGTTCGTATTGTCGTA ACGGTTACATCGGGTCCCCTACAAACGGTAAACAATGCTACAAAAAAACC AATGAGAATTTCCTCTACGAAGACAATCTTCATCTGGGAAATATAAAATC GTATGTTTTAAGCTACGATCAAGATCAAGGGATACGACTCAATGTTGATG TCATAGAAGGCGCTGTTGATATTTATCTCACCGATAACAAACATGTTTTC AGAGCAACGTTAAATGAAAATGGTACACAAAACCTGTTTTACAACGACAA TGAAAAGCCGACTCCCGAGTATACAACCGATGAAGATATATCGGCGGTTT TACTCGGTAACCAACTAATCACTTTCAAGAGATACCAGAAAGGAGTTTTA GCTATGAAGAATATGCAACACCGCGCCATAATTACTATAGACCCACAAGA TGAACATCTTCGGAGAGTTCAGTTTTACGTAGTGATTAAGAAGAGCGACG ATTCAAGACCCATAGCAAAAACAACATTGTATTATGATCAGGGAATACTG GCCCTAGACATGAAGCTACTCTTTGTTGGCCTCCTAATGAGCGCTTTAAC GCTGGTTGTTGAGCTAACTTTAGTGTTCCGATTAAGGAGCGAGTATATGA ATAACCTGAACAACGAACTGAATAATACACATCTAAAGGAGCTTGAAAAT AGACCTATGCTTCAATACATATTTGATGCACCACCGTTGAGTTTTCAGCA CGAGAGAAGAGACTTAAGAGTATTACCAGTAGCGGTACAACAAACAGCAT TTGATGACGATGTTGCATTTTTTTCAGTACTGGTTCAACTACCAGGTTAT CAAAACTCGAAATGTGATATCACTTTTGGTACTGGGATTTTCCTTTTGAA AAGTGAGACTAAAGATTCGAAAAGAATTGAAACTATTAAACGAACCACGA CAGAAGAGTACGATCTAGAACATATTAATTACGGGCACAATATAGCATGA GTGTAGCTGTAACGAGCATGCCACTCAGTGTGACCAAGGGACTGGTCAAG GTTGTCGTTGTCTTCATAACACACTCACTAAAGGCACTTACCAATGCCTC GACCATCGAACTTGTCTTCTACTGCAGCTCTCAGATGCTATGGCCTTGAA TCCTTCCATTCCCAATGAAGCGAGCTGTTTGTACTGCAAAGATGGAAGAT ACGGTCATCGCTGTCAACTTTCTTGTGGTAAAGGTTACTATAGAACAAAA GACAAAGGTTGTAAAAGGGTGAAAATTGTCAACGATGCAAACCTGGTTAT ATAGGAAGTCCACAACACAACCAACAATGTATATCATGTCAAGAATTTTG TCATGGAAAATCAAACATCTGTGTCACTTCAAATTCTTACAACTTTTGGA AAGGCATTATTGAAAACGATAATCTGAGACCCTATCAAGTTATAAAATTG ATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCTGGTGATCCTCAA TATCCTTTGTGGACATCTGAAAGCCAAAAGACAATGTGGAAATATCACTT GTATCTCACTCAATGGATTTTGCATTGGTAATTCTAAATGTGAATGTAAC TATGGCTGGTTTGGGCCAACGTGTGAGAAGCCTTGCCAGTGTAATGGTTT GTCTCCTTGTGACAAAGATTCTGGTAAATGTTTGCAATGTGTCAATCATT CTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00057683-exon-scaffold_297-1575043694:119716..120282 | TCONS_00057683-exon-scaffold_297-1575043694:119716..120282 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1575043694:119007..119189 | TCONS_00057683-exon-scaffold_297-1575043694:119007..119189 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1575043694:118436..118575 | TCONS_00057683-exon-scaffold_297-1575043694:118436..118575 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1575043694:116726..116852 | TCONS_00057683-exon-scaffold_297-1575043694:116726..116852 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1575043694:112903..115449 | TCONS_00057683-exon-scaffold_297-1575043694:112903..115449 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1510915933:119716..120282 | TCONS_00057683-exon-scaffold_297-1510915933:119716..120282 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1510915933:119007..119189 | TCONS_00057683-exon-scaffold_297-1510915933:119007..119189 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1510915933:118436..118575 | TCONS_00057683-exon-scaffold_297-1510915933:118436..118575 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1510915933:116726..116852 | TCONS_00057683-exon-scaffold_297-1510915933:116726..116852 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1510915933:112903..115449 | TCONS_00057683-exon-scaffold_297-1510915933:112903..115449 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1491911889:119716..120282 | TCONS_00057683-exon-scaffold_297-1491911889:119716..120282 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1491911889:119007..119189 | TCONS_00057683-exon-scaffold_297-1491911889:119007..119189 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1491911889:118436..118575 | TCONS_00057683-exon-scaffold_297-1491911889:118436..118575 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1491911889:116726..116852 | TCONS_00057683-exon-scaffold_297-1491911889:116726..116852 | Clytia hemisphaerica | exon |
TCONS_00057683-exon-scaffold_297-1491911889:112903..115449 | TCONS_00057683-exon-scaffold_297-1491911889:112903..115449 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_297 | supercontig | scaffold_297:112903..120282 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00057683 vs. Swiss-Prot (Human)
Match: MGT4B (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT4B PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.385e-53 Identity = 130/414 (31.40%), Postives = 208/414 (50.24%), Query Frame = -2
Query: 2415 VVFGIPTVKRSKAYYVIQTVSSLLKHMKTSERKNVVIVIFVADLDEGFLRKVVKDVRENFPVEVKDGIIQVVAPDKAYYPKNLDNLPRLFGDKQDRVRWRSKQCLDYSYLYYYCKDMAQYFVQLEDDIIAVDDFMQKMRQFITKNDKLRWSVLELGARGFIGMTYRGEHLESLAKFVRYFFWTMPVDLLF------RVYND----IYLYKNPKNFRIK-KP-VFLHVGKFSSLNGQVRKLEDLKDIPIVGRRQFQSVKGNPVAEIESDLSGFYKSNVLENPYSSKGVMWATKPKDGDTLTIMFNSPQKIKRIFISSGMDGHEKDSFYETKLYI-----------SQMKGNT------NSKCGKFELVKFYK---EAIVDITFDEPKENVRCVKLELTAVQKTKGIPNWLIIEEI 3560
VV GIP+V+R Y+ T+ SL+ + E+++ VIV+ +A+ D + V ++++ FP E+ G+++V++P +YP + L FGD ++RVRWR+KQ LDY +L Y + Y+VQLEDDI+A +++ M+ F + W +LE GFIG ++ L + +F+ F+ P+D L +V N + + N RI+ KP +F HVG SSL G+++KL+D KD G++ + NP AE+ + L Y+ LE Y + WA P GD + F P +++R F SG H +D + T + + + +G T S G ++ FYK E VD F P E +R ++Q P W+I+ EI
Sbjct: 144 VVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYP-DFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKD-KDF---GKQALRKEHVNPPAEVSTSLKT-YQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFG-PLEALRL------SIQTDS--PVWVILSEI 542
The following BLAST results are available for this feature:
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