TCONS_00057917 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057917
Unique NameTCONS_00057917
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3078

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057917 ID=TCONS_00057917|Name=TCONS_00057917|organism=Clytia hemisphaerica|type=transcript|length=3078bp
ATGCATTCCGGATGGGTTAGAACTGCTGTCCCTGGCTTCAAAGTCACAAT
GCTCAGGGgtgaattttgaatatttatttcgttttctggaaaaacccagT
AATTCATAGCTATAATTTAATTAGTTAAGGATGTGTTACAAGTTTTTTAC
TCAAACTTTTATTCAAAGACTTGGATTAGGAGATATAGTATATAATCTAC
AGACAACTTTTCACATACTGTGAAAAAAACCCATAACTTTCTGGATCTGT
AGACTAAAATTGAGGAATTTATGTTCAGTTATTTATATAGTACTGTCATG
TTTTTTTCTCTGCATGTGAATTCGGTTCGGTTGAATTTGGGACTTGTTTT
CTATCATGTTTTCAAGGACATTGCTAATTTCAAATACCTAATATTTAGAT
TATTTATAAGATAACAATCATTATGCAAGTTTTTGACTTTGAtgacaaaa
atcttttgatatGTGCATTGGTTACGATTGGAATGCAACTTACCTTCTTC
ATCGTTGCAGCAACGTTCAAATTTGATAAAGTCACTGACTTTGCTGGTGG
CTCAAATTTCTTAGTCGTTGCAATATTGACTTTCGTCTTATCAGAGACTT
ACCACAAACGGCAGATTGCTATAACCGTACTTGTAGGATGCTGGGGTCTC
CGTTTAACTGGTTACCTGTTTTATCGCATACTGAAAATCGGGGAAGACAA
GCGATTTGATGATCGTAGAGAAAACCTTTTAAAATTCGCAGCATTCTGGA
TCTTTCAAGCCTTATGGGTGTTTATTGTCAGCTTACCTGTTATGTATATC
AACTCTCCATATGCTACTATGATACCAGACGAGCTGAAAATCAGTGATTA
TGTTGGGATCGCTTTATTTGCTGTTGGGCTTATCATCGAAACTATCGCCG
ATCAACAGAAATTCAATTATAGAAATAATCCTGATAACAAAGGACATTGG
TGCGATACTGGTCTTTGGTCTTGGTCACGTCATCCCAATTACTATGGAGA
GATCCTTGTTTGGTGGGGTGCTTTTGCTGTCAGTGCTGAAATTGCTGTCT
ATGACAGTAAACTATGGACGTCAGTTATCAGCCCCTTGTTTTTAATGTCA
ATTCTGTTGTTTTTGAGTGGAATTCCACTGTTGGAAACTAAAGCTGATGA
GAAATATGGCAGCAAGGAAGAATATATCATATACAAGAAGCGAACAAGCC
CCTTGTTATTGTTACCACCCTACCTCTATCAACGTATGGGCAAAATCATC
AAAGTGATGTTCTGTTGTGAATTCCCGATGTACAACAATGTTTCGCCTAC
TGAAGAGTACGACCAAATGAACAACGCTTGAANATGGGCAAAATCATCAA
AGTGTTGTTCTGTTGTGAATTCCCGATGTACAACAATGTTTCGCCTACTG
AAGAGTACGACCAAATGAACAACGCTTGAATAGATTTGTTCACTGTATGG
TGGCGAAAAGTAAGGTTTTTTGAACCTTTCCCACCTTGTATGATCTCTTG
TTCTTTGTTTTATGACCCATGGTTTTTCAATTCGTACTATTTTGAAAGGA
CGAGCTGAACGAAACTTGCTAAATTTATCTATTGGATTCAACATTTTTGG
AATGAACATTAGCTGGTGCTAGACGTGTAGCATGTGTTGCGTTGTAGCTT
AAGTTCTCAGTGATATATATAGAATTTTTTCTGATTGAAATTGGCTCTCG
TAAATTGTGATTTTTTCTTATATattcgaaattcgaaaatttATGCACGA
AAGAGATATGTATGAAACTTTCGATCCAAATTTGCAAATATGCAAATCTC
GATGCGCATCTCAGAATCTTTTCAACAAATCAAgttgttcttctttttat
tttacccTAACTATACTTATTTTATCCTACATTTTCTATCCTTTTATCCA
TATTTTAACGTATttatcctaatttgcaataggaCTTGACTGCACAATAT
TCTAATTAACAAAATGTCATAAACTTTTCAGTTCTTTTTACCACTGAAGA
TATCGTGTgtacgctttttcttttataagaataacttcagggtgagattt
cgggtttaaaacaataggcctattgtttagtttagaacaatagaaaaata
ataataataatgctcACCCCCAACCAAAGTACGCCATAGCTTCAGCCCCA
CCCCTTTactttaagaaatattttggcctttaaagaacctgggggctaaa
attactAAATTGTTAGGGGGGctagatgatctgactgagactatgggggc
tgttcagctaatttcaaaagatctcttatcttactattaaatcaaatata
aaaagcaaaagatttgtaaacataaatattaatacaagtaaaatttagtt
ttcatttatcagtactgtactcgcatatattttttattgactctGTACTG
GGGCGGGAGAACATAATTTTTGGGGGGGACCTGAAgtgttaggggaccta
gcacaaggcaaattgttggggggaccttactttgttggaGGGAGTTAGAA
ACCTGGGTGAAGCTATGTAACacaattcttataaataaaaaagcgtgtat
taatTTTGGTGTGTATAGTAGTTAATTTGGTGGTTGCCCAAAATGGGATT
TTTGGtgggtatttaatttggcggatggcagaatttgtaaaatttggcgg
gTGGGGAAATTTTTAGGCACTTGTAAATAAAGATACTTGgtattttaata
gcttttacctaaaaatactaattttagatttttaaattttcatcctAAAT
AAATTTGCCGGGTATCTAATTTAGCGGTTTTACCAAATACCGCCAAATCC
GCCTAATTTAATCCCCGTCCATTCAGTTACCATGCTTCTATGCATTTTCA
ACGGCctcaaaatcacattttcatgTTATATACTGTTTGTATATTCGATG
ATATTttctgttaatattttcttattcatAGTATTTTAGGGGTCTTAGTT
CAGTTGGTTTCTGTACACCTATTTTTATACACCTAACAATACCTTGTACA
TTGTAGCACTATATACAATATAAATTGATTTTAGTCTTAgcgaagaaata
aaaaattctacCCAAATCAACTCAGGAC
Run BLAST on NCBI

protein sequence of TCONS_00057917-protein

>TCONS_00057917-protein ID=TCONS_00057917-protein|Name=TCONS_00057917-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MQVFDFDDKNLLICALVTIGMQLTFFIVAATFKFDKVTDFAGGSNFLVVA
ILTFVLSETYHKRQIAITVLVGCWGLRLTGYLFYRILKIGEDKRFDDRRE
NLLKFAAFWIFQALWVFIVSLPVMYINSPYATMIPDELKISDYVGIALFA
VGLIIETIADQQKFNYRNNPDNKGHWCDTGLWSWSRHPNYYGEILVWWGA
FAVSAEIAVYDSKLWTSVISPLFLMSILLFLSGIPLLETKADEKYGSKEE
YIIYKKRTSPLLLLPPYLYQRMGKIIKVMFCCEFPMYNNVSPTEEYDQMN
NA
Run BLAST on NCBI

transcript from alignment at scaffold_302:103459..107774+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057917 ID=TCONS_00057917|Name=TCONS_00057917|organism=Clytia hemisphaerica|type=transcript|length=4316bp|location=Sequence derived from alignment at scaffold_302:103459..107774+ (Clytia hemisphaerica)
ATGCATTCCGGATGGGTTAGAACTGCTGTCCCTGGCTTCAAAGTCACAAT
GCTCAGGGgtgaattttgaatatttatttcgttttctggaaaaacccagT
AATTCATAGCTATAATTTAATTAGTTAAGGATGTGTTACAAGTTTTTTAC
TCAAACTTTTATTCAAAGACTTGGATTAGGAGATATAGTATATAATCTAC
AGACAACTTTTCACATACTGTGAAAAAAACCCATAACTTTCTGGATCTGT
AGACTAAAATTGAGGAATTTATGTTCAGTTATTTATATAGTACTGTCATG
TTTTTTTCTCTGCATGTGAATTCGGTTCGGTTGAATTTGGGACTTGTTTT
CTATCATGTTTTCAAGGACATTGCTAATTTCAAATACCTAATATTTAGAT
TATTTATAAGATAACAATCATTATGCAAGTTTTTGACTTTGAtgacaaaa
atcttttgatatGTGCATTGGTTACGATTGGAATGCAACTTACCTTCTTC
ATCGTTGCAGCAACGTTCAAATTTGATAAAGTCACTGACTTTGCTGGTGG
CTCAAATTTCTTAGTCGTTGCAATATTGACTTTCGTCTTATCAGAGGTAA
AATCTCTCAAATTGTTCATCTACAACAGTATTCTTAGAGTATCAGGgagg
tcagtactaaaatgtaagacatacattcgagtactaaaaggattttcaca
aatttttaatatacccccacctatttttcgaaaatgttattttagtacac
aactaaaattattttaagcaatttaacgtagataccacctattttttgcc
cttttacggctttaaatttaccaaaatggggtcattgttacaaacctagt
cgaatttagtgcatcaatctgcaaaataatataattttattACTAAACTG
TGCTGAACTGTACATgaaaatatatttaaaaaatatttaaaaaatcggaa
aaattctgaaagatttctgaagattttttcgaaaattcctgaaaaaaaaa
atcaaattttttccaaaattgttaaaaaaatgctccatttttgctgattt
tagaacaaagtactaagatttttcaaaaatttctttaaaagacCACCCTT
tctggtattttagtacacatggtactaaaattatttttgagcttttttgc
agtaccaccacgtcactaaatgtcatgatgtttgagattttagtaccgac
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNcccccccccccccctgagagTATTGCTCTTACACTCAATC
ATAAAGAGTTTGCAAAGTAAAATACAATACtttttcattgttgttttaGA
CTTACCACAAACGGCAGATTGCTATAACCGTACTTGTAGGATGCTGGGGT
CTCCGTTTAACTGGTTACCTGTTTTATCGCATACTGAAAATCGGGGAAGA
CAAGCGATTTGATGATCGTAGAGAAAACCTTTTAAAATTCGCAGCATTCT
GGATCTTTCAAGCCTTATGGGTGTTTATTGTCAGCTTACCTGTTATGTAT
ATCAACTCTCCATATGCTACTATGATACCAGACGAGCTGAAAATCAGTGA
TTATGTTGGGATCGCTTTATTTGCTGTTGGGCTTATCATCGAAACTATCG
CCGATCAACAGAAATTCAATTATAGAAATAATCCTGTGAGTTAAAGAAAT
ATTAATATACAATACTCTGATACTCTTCTACTAAGATGTTTGGGACTTTT
CAATAACTTTCTTATTATTACAGTTGCAACTGAGCGGATCAATATTTTAA
TTCAAATTACAGAAATGTCctaataatagaggttcgaattagtgaCTTGA
TGTAATTGGCTGTTCTATTGACATTAATGTGCTTTTTTATTCTTAGGATA
ACAAAGGACATTGGTGCGATACTGGTCTTTGGTCTTGGTCACGTCATCCC
AATTACTATGGAGAGATCCTTGTTTGGTGGGGTGCTTTTGCTGTCAGTGC
TGAAATTGCTGTCTATGACAGTAAACTATGGACGTCAGTTATCAGCCCCT
TGTTTTTAATGTCAATTCTGTTGTTTTTGAGTGGAATTCCACTGTTGGAA
ACTAAAGCTGATGAGAAATATGGCAGGTAAGACAGCattcatttttaaac
tttgggaAAGTACATCGATGATATGGAAGACATGTTCAAAACTGCTGGAA
ATATGTTTGTAGCCTATTGTTGACGTTTTTCAAAACAGTCCTAACCCCAA
CTGGGGATGTAAAAGAAAACGAGAAATGTTAATAATAGTTTATCATCTGT
TGGAGGTTCTCTGTATTGATTATTTCCccttcatttctctcattttccAG
CAAGGAAGAATATATCATATACAAGAAGCGAACAAGCCCCTTGTTATTGT
TACCACCCTACCTCTATCAACGTATGGGCAAAATCATCAAAGTGATGTTC
TGTTGTGAATTCCCGATGTACAACAATGTTTCGCCTACTGAAGAGTACGA
CCAAATGAACAACGCTTGAANATGGGCAAAATCATCAAAGTGTTGTTCTG
TTGTGAATTCCCGATGTACAACAATGTTTCGCCTACTGAAGAGTACGACC
AAATGAACAACGCTTGAATAGATTTGTTCACTGTATGGTGGCGAAAAGTA
AGGTTTTTTGAACCTTTCCCACCTTGTATGATCTCTTGTTCTTTGTTTTA
TGACCCATGGTTTTTCAATTCGTACTATTTTGAAAGGACGAGCTGAACGA
AACTTGCTAAATTTATCTATTGGATTCAACATTTTTGGAATGAACATTAG
CTGGTGCTAGACGTGTAGCATGTGTTGCGTTGTAGCTTAAGTTCTCAGTG
ATATATATAGAATTTTTTCTGATTGAAATTGGCTCTCGTAAATTGTGATT
TTTTCTTATATattcgaaattcgaaaatttATGCACGAAAGAGATATGTA
TGAAACTTTCGATCCAAATTTGCAAATATGCAAATCTCGATGCGCATCTC
AGAATCTTTTCAACAAATCAAgttgttcttctttttattttacccTAACT
ATACTTATTTTATCCTACATTTTCTATCCTTTTATCCATATTTTAACGTA
TttatcctaatttgcaataggaCTTGACTGCACAATATTCTAATTAACAA
AATGTCATAAACTTTTCAGTTCTTTTTACCACTGAAGATATCGTGTgtac
gctttttcttttataagaataacttcagggtgagatttcgggtttaaaac
aataggcctattgtttagtttagaacaatagaaaaataataataataatg
ctcACCCCCAACCAAAGTACGCCATAGCTTCAGCCCCACCCCTTTacttt
aagaaatattttggcctttaaagaacctgggggctaaaattactAAATTG
TTAGGGGGGctagatgatctgactgagactatgggggctgttcagctaat
ttcaaaagatctcttatcttactattaaatcaaatataaaaagcaaaaga
tttgtaaacataaatattaatacaagtaaaatttagttttcatttatcag
tactgtactcgcatatattttttattgactctGTACTGGGGCGGGAGAAC
ATAATTTTTGGGGGGGACCTGAAgtgttaggggacctagcacaaggcaaa
ttgttggggggaccttactttgttggaGGGAGTTAGAAACCTGGGTGAAG
CTATGTAACacaattcttataaataaaaaagcgtgtattaatTTTGGTGT
GTATAGTAGTTAATTTGGTGGTTGCCCAAAATGGGATTTTTGGtgggtat
ttaatttggcggatggcagaatttgtaaaatttggcgggTGGGGAAATTT
TTAGGCACTTGTAAATAAAGATACTTGgtattttaatagcttttacctaa
aaatactaattttagatttttaaattttcatcctAAATAAATTTGCCGGG
TATCTAATTTAGCGGTTTTACCAAATACCGCCAAATCCGCCTAATTTAAT
CCCCGTCCATTCAGTTACCATGCTTCTATGCATTTTCAACGGCctcaaaa
tcacattttcatgTTATATACTGTTTGTATATTCGATGATATTttctgtt
aatattttcttattcatAGTATTTTAGGGGTCTTAGTTCAGTTGGTTTCT
GTACACCTATTTTTATACACCTAACAATACCTTGTACATTGTAGCACTAT
ATACAATATAAATTGATTTTAGTCTTAgcgaagaaataaaaaattctacC
CAAATCAACTCAGGAC

Coding sequence (CDS) from alignment at scaffold_302:103459..107774+

>TCONS_00057917 ID=TCONS_00057917|Name=TCONS_00057917|organism=Clytia hemisphaerica|type=CDS|length=3636bp|location=Sequence derived from alignment at scaffold_302:103459..107774+ (Clytia hemisphaerica)
ATGCAAGTTTTTGACTTTGAtgacaaaaatcttttgatatGTGCATTGGT
TACGATTGGAATGCAACTTACCTTCTTCATCGTTGCAGCAACGTTCAAAT
TTGATAAAGTCACTGACTTTGCTGGTGGCTCAAATTTCTTAGTCGTTGCA
ATATTGACTTTCGTCTTATCAGAGACTTACCACAAACGGCAGATTGCTAT
AACCGTACTTGTAGGATGCTGGGGTCTCCGTTTAACTGGTTACCTGTTTT
ATCGCATACTGAAAATCGGGGAAGACAAGCGATTTGATGATCGTAGAGAA
AACCTTTTAAAATTCGCAGCATTCTGGATCTTTCAAGCCTTATGGGTGTT
TATTGTCAGCTTACCTGTTATGTATATCAACTCTCCATATGCTACTATGA
TACCAGACGAGCTGAAAATCAGTGATTATGTTGGGATCGCTTTATTTGCT
GTTGGGCTTATCATCGAAACTATCGCCGATCAACAGAAATTCAATTATAG
AAATAATCCTGATAACAAAGGACATTGGTGCGATACTGGTCTTTGGTCTT
GGTCACGTCATCCCAATTACTATGGAGAGATCCTTGTTTGGTGGGGTGCT
TTTGCTGTCAGTGCTGAAATTGCTGTCTATGACAGTAAACTATGGACGTC
AGTTATCAGCCCCTTGTTTTTAATGTCAATTCTGTTGTTTTTGAGTGGAA
TTCCACTGTTGGAAACTAAAGCTGATGAGAAATATGGCAGCAAGGAAGAA
TATATCATATACAAGAAGCGAACAAGCCCCTTGTTATTGTTACCACCCTA
CCTCTATCAACGTATGGGCAAAATCATCAAAGTGATGTTCTGTTGTGAAT
TCCCGATGTACAACAATGTTTCGCCTACTGAAGAGTACGACCAAATGAAC
AACGCTTGAATGCAAGTTTTTGACTTTGAtgacaaaaatcttttgatatG
TGCATTGGTTACGATTGGAATGCAACTTACCTTCTTCATCGTTGCAGCAA
CGTTCAAATTTGATAAAGTCACTGACTTTGCTGGTGGCTCAAATTTCTTA
GTCGTTGCAATATTGACTTTCGTCTTATCAGAGACTTACCACAAACGGCA
GATTGCTATAACCGTACTTGTAGGATGCTGGGGTCTCCGTTTAACTGGTT
ACCTGTTTTATCGCATACTGAAAATCGGGGAAGACAAGCGATTTGATGAT
CGTAGAGAAAACCTTTTAAAATTCGCAGCATTCTGGATCTTTCAAGCCTT
ATGGGTGTTTATTGTCAGCTTACCTGTTATGTATATCAACTCTCCATATG
CTACTATGATACCAGACGAGCTGAAAATCAGTGATTATGTTGGGATCGCT
TTATTTGCTGTTGGGCTTATCATCGAAACTATCGCCGATCAACAGAAATT
CAATTATAGAAATAATCCTGATAACAAAGGACATTGGTGCGATACTGGTC
TTTGGTCTTGGTCACGTCATCCCAATTACTATGGAGAGATCCTTGTTTGG
TGGGGTGCTTTTGCTGTCAGTGCTGAAATTGCTGTCTATGACAGTAAACT
ATGGACGTCAGTTATCAGCCCCTTGTTTTTAATGTCAATTCTGTTGTTTT
TGAGTGGAATTCCACTGTTGGAAACTAAAGCTGATGAGAAATATGGCAGC
AAGGAAGAATATATCATATACAAGAAGCGAACAAGCCCCTTGTTATTGTT
ACCACCCTACCTCTATCAACGTATGGGCAAAATCATCAAAGTGATGTTCT
GTTGTGAATTCCCGATGTACAACAATGTTTCGCCTACTGAAGAGTACGAC
CAAATGAACAACGCTTGAATGCAAGTTTTTGACTTTGAtgacaaaaatct
tttgatatGTGCATTGGTTACGATTGGAATGCAACTTACCTTCTTCATCG
TTGCAGCAACGTTCAAATTTGATAAAGTCACTGACTTTGCTGGTGGCTCA
AATTTCTTAGTCGTTGCAATATTGACTTTCGTCTTATCAGAGACTTACCA
CAAACGGCAGATTGCTATAACCGTACTTGTAGGATGCTGGGGTCTCCGTT
TAACTGGTTACCTGTTTTATCGCATACTGAAAATCGGGGAAGACAAGCGA
TTTGATGATCGTAGAGAAAACCTTTTAAAATTCGCAGCATTCTGGATCTT
TCAAGCCTTATGGGTGTTTATTGTCAGCTTACCTGTTATGTATATCAACT
CTCCATATGCTACTATGATACCAGACGAGCTGAAAATCAGTGATTATGTT
GGGATCGCTTTATTTGCTGTTGGGCTTATCATCGAAACTATCGCCGATCA
ACAGAAATTCAATTATAGAAATAATCCTGATAACAAAGGACATTGGTGCG
ATACTGGTCTTTGGTCTTGGTCACGTCATCCCAATTACTATGGAGAGATC
CTTGTTTGGTGGGGTGCTTTTGCTGTCAGTGCTGAAATTGCTGTCTATGA
CAGTAAACTATGGACGTCAGTTATCAGCCCCTTGTTTTTAATGTCAATTC
TGTTGTTTTTGAGTGGAATTCCACTGTTGGAAACTAAAGCTGATGAGAAA
TATGGCAGCAAGGAAGAATATATCATATACAAGAAGCGAACAAGCCCCTT
GTTATTGTTACCACCCTACCTCTATCAACGTATGGGCAAAATCATCAAAG
TGATGTTCTGTTGTGAATTCCCGATGTACAACAATGTTTCGCCTACTGAA
GAGTACGACCAAATGAACAACGCTTGAATGCAAGTTTTTGACTTTGAtga
caaaaatcttttgatatGTGCATTGGTTACGATTGGAATGCAACTTACCT
TCTTCATCGTTGCAGCAACGTTCAAATTTGATAAAGTCACTGACTTTGCT
GGTGGCTCAAATTTCTTAGTCGTTGCAATATTGACTTTCGTCTTATCAGA
GACTTACCACAAACGGCAGATTGCTATAACCGTACTTGTAGGATGCTGGG
GTCTCCGTTTAACTGGTTACCTGTTTTATCGCATACTGAAAATCGGGGAA
GACAAGCGATTTGATGATCGTAGAGAAAACCTTTTAAAATTCGCAGCATT
CTGGATCTTTCAAGCCTTATGGGTGTTTATTGTCAGCTTACCTGTTATGT
ATATCAACTCTCCATATGCTACTATGATACCAGACGAGCTGAAAATCAGT
GATTATGTTGGGATCGCTTTATTTGCTGTTGGGCTTATCATCGAAACTAT
CGCCGATCAACAGAAATTCAATTATAGAAATAATCCTGATAACAAAGGAC
ATTGGTGCGATACTGGTCTTTGGTCTTGGTCACGTCATCCCAATTACTAT
GGAGAGATCCTTGTTTGGTGGGGTGCTTTTGCTGTCAGTGCTGAAATTGC
TGTCTATGACAGTAAACTATGGACGTCAGTTATCAGCCCCTTGTTTTTAA
TGTCAATTCTGTTGTTTTTGAGTGGAATTCCACTGTTGGAAACTAAAGCT
GATGAGAAATATGGCAGCAAGGAAGAATATATCATATACAAGAAGCGAAC
AAGCCCCTTGTTATTGTTACCACCCTACCTCTATCAACGTATGGGCAAAA
TCATCAAAGTGATGTTCTGTTGTGAATTCCCGATGTACAACAATGTTTCG
CCTACTGAAGAGTACGACCAAATGAACAACGCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036521XLOC_036521Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057917-exon-scaffold_302-1491911889:103459..104054TCONS_00057917-exon-scaffold_302-1491911889:103459..104054Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1510915933:103459..104054TCONS_00057917-exon-scaffold_302-1510915933:103459..104054Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1575043694:103459..104054TCONS_00057917-exon-scaffold_302-1575043694:103459..104054Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1491911889:104858..105193TCONS_00057917-exon-scaffold_302-1491911889:104858..105193Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1510915933:104858..105193TCONS_00057917-exon-scaffold_302-1510915933:104858..105193Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1575043694:104858..105193TCONS_00057917-exon-scaffold_302-1575043694:104858..105193Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1491911889:105405..105634TCONS_00057917-exon-scaffold_302-1491911889:105405..105634Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1510915933:105405..105634TCONS_00057917-exon-scaffold_302-1510915933:105405..105634Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1575043694:105405..105634TCONS_00057917-exon-scaffold_302-1575043694:105405..105634Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1491911889:105859..107774TCONS_00057917-exon-scaffold_302-1491911889:105859..107774Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1510915933:105859..107774TCONS_00057917-exon-scaffold_302-1510915933:105859..107774Clytia hemisphaericaexon
TCONS_00057917-exon-scaffold_302-1575043694:105859..107774TCONS_00057917-exon-scaffold_302-1575043694:105859..107774Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057917-proteinTCONS_00057917-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:103459..107774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.3335	12.7991	42.8462	50.6935	16.1448	12.4161	11.8062	11.9943	9.15504	10.5522	9.22366	8.49361	10.4681	8.93041	9.86317	12.4924	17.5353	31.8231	7.68595	7.72431	33.6054	30.328	16.9825	18.5994	9.30414	10.7211	13.5222	8.14748	35.95	20.586
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010721DUF1295
IPR0011043-oxo-5_a-steroid_4-DH_C
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057917 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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