TCONS_00057956 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057956
Unique NameTCONS_00057956
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2995

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057956 ID=TCONS_00057956|Name=TCONS_00057956|organism=Clytia hemisphaerica|type=transcript|length=2995bp
GAAAGATTTATGACTGATCTATAAAAAGGAATTATTGAAAAGGAGAGAAT
TAACGTTGCTAACGTCTCCTCTAATTGTATTGGTGTTCAAAGAAGATTGT
CTGTAACTCTTGTACCATCTTACACTTGTTTGTCTGATGGTGGGGTTGTT
AGAGTATCTACATGTGATTTCAACGCAATAAAACATTACAGGATAACATA
CAACACGATATAACATGGTGGATACATTACATACAACATCACTGACCAAA
GATACCACGACTGGGTTGATGAATTTAAATCAGCTTTTCTTGGAACTGAA
AAACAACTTGATCTCGGTggagaaaatgaataaaatgacTTCTgctaata
ataataacaacaactTTGACTCATCTACCGGTCGTATGAAATTCCCACGA
ACTAACACCGCTCCTATTATACGAGCGGTCAAAAAGAAAACACGGATCAA
CATCACAGATTACAATTTCACGCTGCCGACACGTGGGCGAAACGGTCGCT
CAAGCAGTGCGGACAGTGATGAAGTGGTGGGGCGTTTGAACAGTTTGATG
GATGATTTAGAGACAAGTTTCTCATCCCTTTTGAAATCGAACGTTTCCTT
AGACACCGATAGTTCAGACGCTGAAAATGATGAAGCCTTCGAAGTGGCCA
CCTCACCATCGCAAAAATACGTGCTGGATAATTTCAGTCAATACCTTTAT
CGCAAATATTCCCTTCGATCGAAGGACTCTCTAAAACCGATAAAACCTCC
TCGTCGAATGTCTGATTCTCGTTTGAACGACTTTCACCGACAACAAACGA
GAAATTCGTCATCATCTTCCGACAGTGGAGAAGGGATGTTGCATAACATA
AGCCAACACTCGACACTTTGTCGACGTTTGAAAACTTTGGAAGCGAGTTT
TGGGTTGACGTTGAAAAAGCAGTTGCATTCAGTTATTGTAAAACGCATGC
GCGAAATGAATGTTTCGGGTTGTGTGTATTGTTTATACGCGCTCTACGAG
AAGCAAAAACGCGATGCTGAAGAAAAAGTCAAACAAATTCGAAAAACACT
TCAAGAACAAGAGCATCTTCAAGAACGCTTACGTCAGCAGAAAGAGGAAT
CGGACGCTGACAACGAATGGTTGAAGAGTGAAGACGAGAAAGCGTACGTT
GAAACGGCTTCACAAGGCGATCCTTCTTCACCGACTGATCCTTCTACTAC
TGAGCCTTCTACTACTGATGAAGTGGACTCCAAAACGAGGCTATCAAAAC
GACATTCCTATAATGGGGAGAAAACAGAATATGACAAAGACAGACTTTCC
GAAGTATGGGATCGAAAAATGGAACAAACCAAAAACGCAAAATCACCCTT
CAGAGCCAGTATGCCGCTATGGGCACCGATGGCTTCAACAGACGAGCAAC
GCCCAAAAACACAAGAAGGGCGTCCACTGCCGCCCGTTCCCTCGTCACCA
ACCGAAGTTGAACGCCCAACACAACCTGCGCCTCCGCTCAAAACGAAAAA
CGATAACCCGCCACCACCAAAACCAGAACGATCTTTATCAAGCGAAGCGA
AGGCCTCAAATTCCGACGACGAATATGCGCGCcctcaaaaacataaaaac
gacGACATGGACCCGGCTGCAATGAGACGCTCCAAAACGATAAGTGCTGT
TGACCGGCCTAAATCACGAGACTCGCCCGGCATGCTGCGTAGAAATACGG
AGACGGCACGTTCATCTCGAGCGAAAGAAGTCTTACCTGCAAATGATATC
GTTTATCAACACACGACGAGCGTTGTCAAATCCGTTATCGAGTTCAATAC
GGGCGTCCAACATGCGCAACCTGAAGAATTTGTCGACCTCGTCAAGGTTG
TTGGATTAAATTTACGTGACCTTCTTGCTGAAGTCGATAATGGTGTCCAA
AATATCCCTGAGTCAGCACAAAAAGAGATCGAGATGGCACATAAAGTATT
ATCGAGTGATATGGCAGAACTCGTTGCAAAAATGAAATTGGCACAAAAAT
ACGCAGAAACGACGTTGGGGCAAGAAAATAAACGCCTTATGCTTGCTGCA
GCGCATGCACTAGCTATTGATGCTAAAAATCTGTATGACACTTATTCTAA
AGTTAGAGAAAATAGTTTAAATAATGAGAATAATTTAAGTtaagttttaa
aaagaattattttttataatacGCGTGTAGTGATGATGTGACAAAGAAAA
TTGGAACTGTAAACGAGGAGAATGAAACAAGATTTTCACCACTTCTTTGT
TTAGCGGTGTACGCTGTCTAACCGTAAATTTGaaccaattttctttctca
tttcaTCAGACCACAGTTCAAGCAACCAATCCCTTCAATCCCACTGATAG
CCTGCTTCACGTTTTCATCTTTGATAGAGATTTTTTCTTCACAATATTTT
CAGAGTATCGTAGTCCTAGAAATTATTACACAGATGTGGCCGAGATAATT
TTTACCAACCTTTTTGGTTGGTCGGGAAAATGAAATTAACTATCAAAatc
ttatcttaaaattttgggcaatttcAAACTCTCAGTGCTCTCTCAGCTAA
TTGCAAATCACAACATAGCACCGAGTATGGTTGCTTGAACattgttttta
gatattttgtgatttttgtccTTTTTGTTTATTATCGAATTTTTTTATAT
CTCGTTTTTTTCGGGTTGcttattttgtacttttgatTTATGAAGCTCTT
CTGAATTgaacttttaacttttaagaTAATGAACTACTTTAAGGATTTGG
TTATAGCAAAAagcttttcattaaaaatattttatttctgttTGAATATG
GACATAAACCATTCGAGAATGGCTTCAAAATCATCATTGTAAAATTTTTA
TAGATTTATCTCTCTTGCAATGGTAGACATCCATTTTCTGCTATCGCATG
TGTAACTCTGTCCCTTTTTGGCAAACATTATTGTAAATAAAACCTCTACT
GAGAAAAGATAAGGAAATTATATTaaagccaaaaaaatcaaaatt
Run BLAST on NCBI

transcript from alignment at scaffold_302:111082..119033-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057956 ID=TCONS_00057956|Name=TCONS_00057956|organism=Clytia hemisphaerica|type=transcript|length=7952bp|location=Sequence derived from alignment at scaffold_302:111082..119033- (Clytia hemisphaerica)
GAAAGATTTATGACTGATCTATAAAAAGGAATTATTGAAAAGGAGAGAAT
TAACGTTGCTAACGTCTCCTCTAATTGTATTGGTGTTCAAAGAAGATTGT
CTGTAACTCTTGTACCATCTTACACTTGTTTGTCTGATGGTGGGGTTGTT
AGAGTATCTACATGTGATTTCAACGCAATAAAACATTACAGGATAACATA
CAACACGATATAACATGGTGGATACATTACATACAACATCACTGACCAAA
GATACCACGACTGGGTTGATGAATTTAAATCAGCTTTTCTTGGAACTGAA
AAACAACTTGATCTCGGTGGAGAAAATGAATAAAATGACTTCTGCTAATA
ATAATAACAACAACTTTGACTCATCTACCGGTCGTATGAAATTCCCACGA
ACTAACACCGCTCCTATTATACGAGCGGTCAAAAAGAAAACACGGATCAA
CATCACAGATTACAATTTCACGCTGCCGACACGTGGGCGAAACGGTCGCT
CAAGCAGTGCGGACAGTGATGAAGTGGTGGGGCGTTTGAACAGTTTGATG
GATGATTTAGAGACAAGTTTCTCATCCCTTTTGAAATCGAACGTTTCCTT
AGACACCGATAGTTCAGACGCTGAAAATGATGAAGCCTTCGAAGTGGCCA
CCTCACCATCGCAAAAATACGTGCTGGATAATTTCAGTCAATACCTTTAT
CGCAAATATTCCCTTCGATCGAAGGACTCTCTAAAACCGATAAAACCTCC
TCGTCGAATGTCTGATTCTCGTTTGAACGACTTTCACCGACAACAAACGA
GAAATTCGTCATCATCTTCCGACAGTGGAGAAGGGATGTTGCATAACATA
AGCCAACACTCGACACTTTGTCGACGTTTGAAAACTTTGGAAGCGAGTTT
TGGGTTGACGTTGAAAAAGCAGTTGCATTCAGTTATTGTAAAACGCATGC
GCGAAATGAATGTTTCGGGTTGTGTGTATTGTTTATACGCGCTCTACGTA
AGTAGTCTTTTGATTTATTATGAGATTAACTCTCAGATTTTTAAATCACA
ACTTTCTCACACATACAAATGAACGATAAGTCATAAAGTAATAGTTGGCT
ATCTAGCCTCTGCGGGTTTTATTTTATGTTTATTGTAAATAACCTTCATG
AAGCCGTCCCGAGACTTCGAAATGGTAACGGGTTGGCAAATATATATTCT
ATGAATACCCTGAACAATAAAAAACCTCAGAATGCAAGCATATAATGGTT
TTACAGGAAGCGAAAAGGTCTCAAAACGATGGTTGATAAAGTTTATGAAA
GACTTTTATGGAAAGAATTTTTTCTTCTTTTCTTTCCCTTGTGGGCTCGC
ATGAAATGAGCTAACAAACAATTTACTAACATGAATGATATCGTAACTGT
TTCAGAACATCCATAACGTTTTAAAATTGGCATCGAAAATAGCATGAAAC
TAATTGTTCATTTCCTCTCTTTCTCCATTTATTTTCTATGGAAGAAGGAG
GCGATTCTTTCTTTCGTTTTCCTCCTCCATCAAAACAATGGGACATTATA
GCTCGTTAGTTTGTTCATTTCTGGATAAAATCTTTTTTAATTACCAATTT
ATCTTAATAAGTTTGAGGGGTGTGGCTGAATTGATACTCGGTCACATTCA
TTTTGCCACCATCAAATAAAGCGTTGCAATGATTTGAATGACATCTAGAT
AAATGTACCTTGGCGAAGGTTCACCCTACAGGCTTTTTTTCCTATAACAA
TGATGTTTTTTAAAGAATATCTTAACTTTTTGGGGAGAATCATCCTGAAA
TATCCTATCGGTATTCTTAGGTTTGATCAAACCAAAACTCAGGCAAAAAT
TTGGCACATTTGTTGAGCATTGGTACATTGCTCGGTATAATAATTTGTTG
GCCAGTTTCATTGTAAATATTCTTATAAAGTATATTGTGTACCTCAGAAA
TTTGTAATAAAAGTCCACGTTTGTCTTGAAGTTGATTAAGGCCTTTCAAA
ATACCCTTTGTAACCATCATTTCAAATGTCTTTCTCGCACACCAGGAGAA
GCAAAAACGCGATGCTGAAGAAAAAGTCAAACAAATTCGAAAAACACTTC
AAGAACAAGAGCATCTTCAAGAACGCTTACGTCAGCAGAAAGAGGAATCG
GACGCTGACAACGAATGGTTGAAGAGTGAAGACGAGAAAGCGTACGTTGA
AACGGCTTCACAAGGCGATCCTTCTTCACCGACTGATCCTTCTACTACTG
AGCCTTCTACTACTGATGAAGTGGACTCCAAAACGAGGCTATCAAAACGA
CATTCCTATAATGGGGTAAGTTGCATCATAGAGGTAATAAAAGTTAGATG
GAGTAACAACTTTTCTGTAATAGCCAGAGAAGTCATAAAACCCTTCAGAA
ATTTCTTTCAAATCGGCCTCCTTTTATTACCAATCCTTGATAGCAAAAAT
CAGTCAAGATATAGATTATAAGAACTAAAGTAAAGTTATTCTGCCCAACG
AAACCTCGTATTTTTAGGTAAAATGCGAGTTTTTTTCGAGTAATGATTTC
TTTATAGTTTTAAAAGAAGTTTTTATTTTATCGGGAAACTTACGAGAGGT
AAACTTCTTCAAATTTTGCGAATTCTTTGTTGTTTGTGGAAGGTTCTTTG
CTATAAATATCTTTAGATTTAAAATAGCAGCTGCCTCAAAATTTTTATAG
AATATAGTTGAAAGATTGGCATTAGTAAATATGTAAAAATTGACAAAATT
TACCGAGGATTCCCTGAGCAGCGAACATTTCAAATTCGATGTTCTGTGCT
TATTCTTGCAAGGGTTTCTTATGTTTTATCAACGAAACTGTCATCACACA
ATGAACAAATTAAAAATGTAGCGTGATTTTATTCAAATTCTCTTCGACTC
AAGTATTCCCATGAGTGAAAGTAAAATTAATGGCTTTTTCCCAAAGCAAC
AAAGCAACAGTTTGCTATCAACGATACAATACAATAGAATAGTAGGCGTG
GTATCTCCATCTATATTTTTATTACCTCCATGGTTTCATCGAAATCAATT
ATGTATGAAATGCATAAACAAGCCCTTGTCTGATTCCTAACTTTTCATCA
GAATAAACGCAAATCGAAATGCAAAAAAATGCTATCTAGTGGGCGTATGA
ATGAATATTTATACCCATGATAAACAATACCCAATATTGTGAAAAATACG
ATCAAAACAGAGTTGAGCAACACTTCTAGTTTCTAACCAACATCTTGAAA
ACTCGAAAGATATTGACCCTCCTCTTCTATAAACGGCACAGATGTTTATT
TTTGAAGTTCACTTGGCAGTAAAAACACCGCAAACCGCAGAAACATTTTC
TTATGTTTGTTTATCAGTTTCCTTCTCCAAAATTTCCCACAAAATTTGAT
CCGTGTCCGCAACAAATTCGTTTACTTTATAAGCCTACTCTACGCTAAAT
TTCACGTTTTTCACTTAAGATTGGGTATTCAGAGCGTAGACTTCTAATTT
TGATGTTTACGGTTCGCGGTCTTACCTAGAACGCTCGTATTCAACATTGA
GGATGCAACGCATGCGCGCTATATCAACTTGCAGATAAGAATTAGCCAAT
CTTGAGTTTACCGCGATCTTGATAACCAGCTCCTATAGATTTTAAAGATT
TGTATGGACAATTTAGTTTTTTTTTCCGCAAAATTTTTCCCAATTTTATC
CTAACTTTTTATTTCTCCACTTTGGCACAAGTAGAAGAATAAGTGTTTCT
TACTTCATCAATCAAGGATGAAGGTTTTTTTGGTTGGTTCTGACTTTCCT
ATAATCTAACAACAACCCGGAATTCTATAGCGCATCTCCTCGCTTCATTT
TAGGAGAAAACAGAATATGACAAAGACAGACTTTCCGAAGTATGGGATCG
AAAAATGGAACAAACCAAAAACGCAAAATGTAAGAGTTTGGAATATTCTT
TTTATAGAAGTCTTAACATGTATTCTTTAAAGTTTCTGATGAACATTTTG
CCAGCTATAGAAAATTTCGATTTCTTTATGGTCGTTTGCGAGACTCAGTC
AGTAATTACAAACACCGGGTTTTTTTCGTTTCCTATTCAGAACAAACGAA
ATTAATTTTCTCATTTTTCCATCTTTAAGCTTTAGCCTGATTCGCAGACC
TCTATGGTTATACTTCATTCTATAAGAAAATTGTCAATTGAGGATTAGCA
GAAGCCAACTTGGGGTTGTTCAAAAGTGGATTAGCGGCCGATTAGCTTAA
TTTTTTATTAAATCTCGATTAGCGCAAAAAATTAAGCTTAAATCTGGATT
AAATTTCGATTAAATAGGCCAAATTTTAATTCTGGACCATTTTAACGTGT
GTATGTGAAATAGAAAGCTCCAACACTTTAACCATCTTCATCACCTTATA
ACTATAGCACTGAACCTACGACAATCGACTAACCACCTTCGAAGAAACAG
TAAGTGTCCTACTCCCACCCTTCTTCGTCACCTTCCCTCCTACCCTTCAA
CTCCTCTTACCTCATCATCAGCATGCTTCCACCCTCCATTATCATGCTAC
ATACTAACCTGAACCCACTTCACATGCTGTACTTCCCTGTCTTAAACATC
CAAACTCATTTCACGCAGCACATACACACTTTGCATTCACACTACAATCT
ATGAACCAACCTTGACACTTTTATTTTCCATTTTCAGCACCCTTCAGAGC
CAGTATGCCGCTATGGGTAAGTGTATTTTGCTCTCTCGTCCGGTTCTTTG
AATTTCAAATATAAAGTCCAATAAATTTCGGGCTCCATCAAAATTCGGTA
AAAAATAAAAATCTATAATATTTGGAAATCGTGAAAGATATTTTTTGGCC
GATAATACCTTCTCCTAGTTAATAAACAACCGTTTTGGTAGGGCTGAATG
AATATTTGTCATTTTTGTTTGAAAATTCTCATTTTTATCCAATGTTTCGC
GAGAGTTATTCATAAAATATGTTTTCTTCGAATTTACGAAAGTGATTTTT
CGAATGTCTGCCCCAGAAAGTTTGCTAAAATCGAACGTGCATCTTAATTT
TTCATCAGGCACCGATGGCTTCAACAGACGAGCAACGCCCAAAAACACAA
GAAGGGCGTCCACTGCCGCCCGTTCCCTCGTCACCAACCGAAGTTGAACG
CCCAACACAACCTGCGCCTCCGCTCAAAACGAAAAACGATAACCCGCCAC
CACCAAAACCAGAACGATCTTTATCAAGCGAAGCGAAGGCCTCAAATTCC
GACGACGAATATGCGCGCCCTCAAAAACATAAAAACGACGACATGGACCC
GGCTGCAATGAGACGCTCCAAAACGATAAGTGCTGTTGACCGGCCTAAAT
CACGAGACTCGCCCGGCATGCTGCGTAGAAATACGGAGACGGCACGTTCA
TCTCGAGCGAAAGAAGTCTTACCTGCAAATGATATCGTTTATCAACACAC
GACGAGCGTTGTCAAATCCGTTATCGAGTTCAATACGGGCGTCCAACATG
CGCAACCTGAAGAATTTGTCGACCTCGTCAAGGTATTTAGCTTCTTCATT
CTCAGAGAATTTGCTTGTATAAAAACTTGGCGTATGCTTTCAAGCTCATT
ATATGGAATTTTGATTAAGATAGTCTAGAGGGCCTCGTAAATTTTCAATG
TTACGAGCAATGATTGAACAACTAATATAAACATGACTTTTGANATAATA
CCTTCTCCTAGTTAATAAACAACCGTTTTGGTAGGGCTGAATGAATATTT
GTCATTTTTGTTTGAAAATTCTCATTTTTATCCAATGTTTCGCGAGAGTT
ATTCATAAAATATGTTTTCTTCGAATTTACGAAAGTGATTTTTCGACTGT
CTGCCCCAGAAAGTTTGCTAAAATCGAACGTGCATCTTAATTTTTCATCA
GGCACCGATGGCTTCAACAGACGAGCAACGCCCAAAAACACAAGAAGGGC
GTCCACTGCCGCCCGTTCCCTCGTCACCAACCGAAGTTGAACGCCCAACA
CAACCTGCGCCTCCGCTCAAAACGAAAAACGATAACCCGCCACCACCAAA
ACCAGAACGATCTTTATCAAGCGAAGCGAAGGCCTCAAATTCCGACGACG
AATATGCGCGCCCTCAAAAACATAAAAACGACGACATGGACCCGGCTGCA
ATGAGACGCTCCAAAACGATAAGTGCTGTTGACCGGCCTAAATCACGAGA
CTCGCCCGGCATGCTGCGTAGAAATACGGAGACGGCACGTTCATCTCGAG
CGAAAGAAGTCTTACCTGCAAATGATATCGTTTATCAACACACGACGAGC
GTTGTCAAATCCGTTATCGAGTTCAATACGGGCGTCCAACATGCGCAACC
TGAAGAATTTGTCGACCTCGTCAAGGTATTTAGCTTCTTCATTCTCAGGG
AATTTGCTTGTATAAAAACTTGGCGTATGCTTTTCAAGCTCATTATATGG
AATTTTGATTAAGATCTAGAGGGTCTAGAGGGCCTCGTAAATTTTCAATG
TAACGAGCAATGATTGAACAACTAATATAAACATGACTGTTGAATATTCA
GGTTGTTGGATTAAATTTACGTGACCTTCTTGCTGAAGTCGATAATGGTG
TCCAAAATATCCCTGAGTCAGCACAAAAAGAGGTAAGTAAACATTAGTTA
TAAGTAATTGCTGTAAAGAATTTATAATAAATTGAAACTATCTGATATTC
TGTCGGGTTCAGCTGCTCCTACCCGTTTAGACAGCATAGTTAGACGTAGA
CAATCCCCAAAACGTGGGTAAATCTACGGTCGGGTGAAATTCTGTAATAC
AATTCTTGTAGATTGAAAATTTTCCAGATTTTCAGAGCTTTAGCTCTACA
TCATATTATTATATTTTAAAACCTACCCTTTCAGATCGAGATGGCACATA
AAGTATTATCGAGTGATATGGCAGAACTCGTTGCAAAAATGAAATTGGCA
CAAAAATACGCAGAAACGACGTTGGGGCAAGAAAATAAACGCCTTATGCT
TGCTGCAGCGCATGCACTAGCTATTGATGCTAAAAATCTGTATGACACTT
ATTCTAAAGTTAGAGAAAATAGTTTAAATAATGAGAATAATTTAAGTTAA
GTTTTAAAAAGAATTATTTTTTATAATACGCGTGTAGTGATGATGTGACA
AAGAAAATTGGAACTGTAAACGAGGAGAATGAAACAAGATTTTCACCACT
TCTTTGTTTAGCGGTGTACGCTGTCTAACCGTAAATTTGAACCAATTTTC
TTTCTCATTTCATCAGACCACAGTTCAAGCAACCAATCCCTTCAATCCCA
CTGATAGCCTGCTTCACGTTTTCATCTTTGATAGAGATTTTTTCTTCACA
ATATTTTCAGAGTATCGTAGTCCTAGAAATTATTACACAGATGTGGCCGA
GATAATTTTTACCAACCTTTTTGGTTGGTCGGGAAAATGAAATTAACTAT
CAAAATCTTATCTTAAAATTTTGGGCAATTTCAAACTCTCAGTGCTCTCT
CAGCTAATTGCAAATCACAACATAGCACCGAGTATGGTTGCTTGAACATT
GTTTTTAGATATTTTGTGATTTTTGTCCTTTTTGTTTATTATCGAATTTT
TTTATATCTCGTTTTTTTCGGGTTGCTTATTTTGTACTTTTGATTTATGA
AGCTCTTCTGAATTGAACTTTTAACTTTTAAGATAATGAACTACTTTAAG
GATTTGGTTATAGCAAAAAGCTTTTCATTAAAAATATTTTATTTCTGTTT
GAATATGGACATAAACCATTCGAGAATGGCTTCAAAATCATCATTGTAAA
ATTTTTATAGATTTATCTCTCTTGCAATGGTAGACATCCATTTTCTGCTA
TCGCATGTGTAACTCTGTCCCTTTTTGGCAAACATTATTGTAAATAAAAC
CTCTACTGAGAAAAGATAAGGAAATTATATTAAAGCCAAAAAAATCAAAA
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036536XLOC_036536Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057956-exon-scaffold_302-1575043694:118037..119033TCONS_00057956-exon-scaffold_302-1575043694:118037..119033Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1575043694:116719..116988TCONS_00057956-exon-scaffold_302-1575043694:116719..116988Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1575043694:115105..115180TCONS_00057956-exon-scaffold_302-1575043694:115105..115180Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1575043694:114318..114346TCONS_00057956-exon-scaffold_302-1575043694:114318..114346Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1575043694:113502..113975TCONS_00057956-exon-scaffold_302-1575043694:113502..113975Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1575043694:112402..112482TCONS_00057956-exon-scaffold_302-1575043694:112402..112482Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1575043694:111082..112149TCONS_00057956-exon-scaffold_302-1575043694:111082..112149Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1510915933:118037..119033TCONS_00057956-exon-scaffold_302-1510915933:118037..119033Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1510915933:116719..116988TCONS_00057956-exon-scaffold_302-1510915933:116719..116988Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1510915933:115105..115180TCONS_00057956-exon-scaffold_302-1510915933:115105..115180Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1510915933:114318..114346TCONS_00057956-exon-scaffold_302-1510915933:114318..114346Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1510915933:113502..113975TCONS_00057956-exon-scaffold_302-1510915933:113502..113975Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1510915933:112402..112482TCONS_00057956-exon-scaffold_302-1510915933:112402..112482Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1510915933:111082..112149TCONS_00057956-exon-scaffold_302-1510915933:111082..112149Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1491911889:118037..119033TCONS_00057956-exon-scaffold_302-1491911889:118037..119033Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1491911889:116719..116988TCONS_00057956-exon-scaffold_302-1491911889:116719..116988Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1491911889:115105..115180TCONS_00057956-exon-scaffold_302-1491911889:115105..115180Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1491911889:114318..114346TCONS_00057956-exon-scaffold_302-1491911889:114318..114346Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1491911889:113502..113975TCONS_00057956-exon-scaffold_302-1491911889:113502..113975Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1491911889:112402..112482TCONS_00057956-exon-scaffold_302-1491911889:112402..112482Clytia hemisphaericaexon
TCONS_00057956-exon-scaffold_302-1491911889:111082..112149TCONS_00057956-exon-scaffold_302-1491911889:111082..112149Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:111082..119033 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0259484	0.274838	0.163617	0.00318563	0	0	0	0	3.31663e-08	1.2464e-09	0	0	0	0	0	2.02002e-06	0	0	0	0	0.00832389	0.073284	0	0	0	0
Blast
[Close]
BLAST of TCONS_00057956 vs. Swiss-Prot (Human)
Match: FAK1 (Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 3.377e-23
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 2 
Query: 1739 ANDIVYQHTTSVVKSVIEFNTGVQHAQPEEFVDLVKVVGLNLRDLLAEVDNGVQNIPESAQKEIEMAHKVLSSDMAELVAKMKLAQKYAETTLGQENKR 2035
            +ND VY++ T +VK+VIE ++ +Q A PEE+V +VK VGL LR LLA VD  +  +P S  +EIEMA K+L+SD+ EL+ KMKLAQ+Y  T+L QE K+
Sbjct:  920 SNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKK 1018
The following BLAST results are available for this feature:
BLAST of TCONS_00057956 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAK13.377e-2353.54Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE... [more]
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